AlfalfaGEDB | MsaG000756

M. sativa ssp. caerulea / MsaG000756

KEGG: -
GO: -
PFAM: PF13912.9

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG000756	XP_024626741.1	60.751	293	77	4	1	278	1	270	2.20e-110	331

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG000756	tr\|A0A2K3N3B0\|A0A2K3N3B0_TRIPR	54.333	300	104	7	20	297	1	289	2.84e-93	287

TFs/TRs:

Gene ID	Type	Classification
MsaG000756	TF	C2H2

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000045	MsaG000756	0.813422	4.445916e-51	8.260473e-49
MsaG000110	MsaG000756	0.838664	4.627770e-57	1.732657e-54
MsaG000153	MsaG000756	0.811078	1.435950e-50	2.517591e-48
MsaG000188	MsaG000756	0.809354	3.366831e-50	5.660269e-48
MsaG000262	MsaG000756	0.814920	2.084383e-51	4.021082e-49
MsaG000756	MsaG000798	0.824096	1.719106e-53	4.219036e-51
MsaG000756	MsaG001022	0.812202	8.200637e-51	1.477967e-48
MsaG000756	MsaG001367	0.816864	7.713722e-52	1.563551e-49
MsaG000756	MsaG001369	0.806566	1.310620e-49	2.061386e-47
MsaG000756	MsaG001438	0.802523	9.052789e-49	1.296075e-46
MsaG000756	MsaG001726	0.806608	1.284168e-49	2.021818e-47
MsaG000756	MsaG002184	0.808148	6.078143e-50	9.926462e-48
MsaG000756	MsaG002727	0.812276	7.904619e-51	1.427228e-48
MsaG000756	MsaG002802	0.800083	2.844454e-48	3.853040e-46
MsaG000756	MsaG003136	0.805667	2.022417e-49	3.114008e-47
MsaG000756	MsaG003784	0.822224	4.677213e-53	1.091204e-50
MsaG000756	MsaG003789	0.806638	1.266043e-49	1.994632e-47
MsaG000756	MsaG003863	0.831162	3.517286e-55	1.052387e-52
MsaG000756	MsaG004046	0.808708	4.621876e-50	7.651025e-48
MsaG000756	MsaG004141	0.802633	8.595940e-49	1.233777e-46
MsaG000756	MsaG004257	0.802537	8.992420e-49	1.287882e-46
MsaG000756	MsaG004368	0.811630	1.091212e-50	1.939189e-48
MsaG000756	MsaG004400	0.806748	1.200486e-49	1.896247e-47
MsaG000756	MsaG004653	0.828598	1.472965e-54	4.096232e-52
MsaG000756	MsaG004848	0.816168	1.102658e-51	2.195605e-49
MsaG000756	MsaG005055	0.807753	7.368050e-50	1.191945e-47
MsaG000756	MsaG005379	0.829082	1.126240e-54	3.174803e-52
MsaG000756	MsaG005512	0.815005	1.995631e-51	3.858268e-49
MsaG000756	MsaG005641	0.802011	1.152739e-48	1.631081e-46
MsaG000756	MsaG005964	0.820391	1.232676e-52	2.739328e-50
MsaG000756	MsaG006090	0.825686	7.274869e-54	1.864972e-51
MsaG000756	MsaG006612	0.812352	7.609876e-51	1.376642e-48
MsaG000756	MsaG007154	0.803239	6.451682e-49	9.390037e-47
MsaG000756	MsaG007403	0.809862	2.621252e-50	4.461433e-48
MsaG000756	MsaG007518	0.820501	1.163488e-52	2.593062e-50
MsaG000756	MsaG007742	0.800141	2.768778e-48	3.755369e-46
MsaG000756	MsaG007984	0.805289	2.425228e-49	3.701482e-47
MsaG000756	MsaG008006	0.828145	1.891617e-54	5.194047e-52
MsaG000756	MsaG008155	0.807824	7.115730e-50	1.153114e-47
MsaG000756	MsaG009002	0.815959	1.226658e-51	2.429601e-49
MsaG000756	MsaG009005	0.805561	2.128223e-49	3.268734e-47
MsaG000756	MsaG009117	0.801178	1.705062e-48	2.367425e-46
MsaG000756	MsaG009453	0.814723	2.303435e-51	4.421570e-49
MsaG000756	MsaG009475	0.816581	8.922419e-52	1.795463e-49
MsaG000756	MsaG010594	0.818274	3.722971e-52	7.825748e-50
MsaG000756	MsaG010943	0.837984	6.913754e-57	2.534400e-54
MsaG000756	MsaG011477	0.805008	2.775430e-49	4.208508e-47
MsaG000756	MsaG011592	0.811728	1.039002e-50	1.850877e-48
MsaG000756	MsaG011812	0.834745	4.566731e-56	1.518175e-53
MsaG000756	MsaG011941	0.834601	4.961974e-56	1.642417e-53
MsaG000756	MsaG011942	0.806189	1.572510e-49	2.451329e-47
MsaG000756	MsaG012058	0.809922	2.544775e-50	4.337539e-48
MsaG000756	MsaG012208	0.805738	1.953958e-49	3.013699e-47
MsaG000756	MsaG012327	0.808237	5.818481e-50	9.522967e-48
MsaG000756	MsaG012454	0.804529	3.490591e-49	5.234343e-47
MsaG000756	MsaG012496	0.815828	1.312016e-51	2.589967e-49
MsaG000756	MsaG013274	0.803067	6.997652e-49	1.014437e-46
MsaG000756	MsaG015044	0.802363	9.764696e-49	1.392892e-46
MsaG000756	MsaG015195	0.800226	2.660793e-48	3.615866e-46
MsaG000756	MsaG015248	0.808720	4.594581e-50	7.608104e-48
MsaG000756	MsaG015314	0.843973	1.883386e-58	8.342702e-56
MsaG000756	MsaG015527	0.802134	1.087466e-48	1.543069e-46
MsaG000756	MsaG015609	0.845887	5.767366e-59	2.721177e-56
MsaG000756	MsaG015584	0.854194	2.791252e-61	1.752211e-58
MsaG000756	MsaG017003	0.802213	1.048133e-48	1.489935e-46
MsaG000756	MsaG017271	0.820275	1.310316e-52	2.902964e-50
MsaG000756	MsaG017479	0.802302	1.004841e-48	1.431361e-46
MsaG000756	MsaG017504	0.811159	1.379198e-50	2.422900e-48
MsaG000756	MsaG018069	0.827376	2.889155e-54	7.763714e-52
MsaG000756	MsaG018082	0.835873	2.378573e-56	8.178168e-54
MsaG000756	MsaG018397	0.803993	4.507675e-49	6.676145e-47
MsaG000756	MsaG018484	0.816730	8.264409e-52	1.669416e-49
MsaG000756	MsaG018756	0.815057	1.943173e-51	3.761696e-49
MsaG000756	MsaG018916	0.801374	1.555406e-48	2.169268e-46
MsaG000756	MsaG018960	0.808354	5.494361e-50	9.017664e-48
MsaG000756	MsaG019084	0.808517	5.074851e-50	8.361959e-48
MsaG000756	MsaG019188	0.824313	1.529328e-53	3.775695e-51
MsaG000756	MsaG019287	0.829667	8.132458e-55	2.331254e-52
MsaG000756	MsaG019533	0.807855	7.010224e-50	1.136873e-47
MsaG000756	MsaG019589	0.832122	2.045819e-55	6.295404e-53
MsaG000756	MsaG019806	0.800512	2.327915e-48	3.184074e-46
MsaG000756	MsaG020202	0.839458	2.887396e-57	1.108193e-54
MsaG000756	MsaG020361	0.805746	1.946789e-49	3.003132e-47
MsaG000756	MsaG020480	0.844094	1.748038e-58	7.775033e-56
MsaG000756	MsaG020583	0.846072	5.138745e-59	2.439599e-56
MsaG000756	MsaG020618	0.801398	1.537517e-48	2.145512e-46
MsaG000756	MsaG020712	0.822965	3.151421e-53	7.500916e-51
MsaG000756	MsaG020714	0.815696	1.403239e-51	2.760840e-49
MsaG000756	MsaG020716	0.824709	1.235260e-53	3.082591e-51
MsaG000756	MsaG020897	0.801855	1.240508e-48	1.749125e-46
MsaG000756	MsaG021846	0.802760	8.095135e-49	1.165241e-46
MsaG000756	MsaG022007	0.810266	2.147008e-50	3.690343e-48
MsaG000756	MsaG022627	0.805835	1.865215e-49	2.883355e-47
MsaG000756	MsaG022633	0.813324	4.671664e-51	8.658288e-49
MsaG000756	MsaG022571	0.821025	8.829273e-53	1.995333e-50
MsaG000756	MsaG023194	0.808991	4.023422e-50	6.705674e-48
MsaG000756	MsaG023475	0.807233	9.487402e-50	1.515776e-47
MsaG000756	MsaG023960	0.822038	5.164490e-53	1.198882e-50
MsaG000756	MsaG024336	0.809378	3.327227e-50	5.597122e-48
MsaG000756	MsaG024630	0.809278	3.494911e-50	5.864902e-48
MsaG000756	MsaG025367	0.801938	1.193019e-48	1.685323e-46
MsaG000756	MsaG026689	0.809423	3.253217e-50	5.478875e-48
MsaG000756	MsaG026820	0.834890	4.202214e-56	1.402967e-53
MsaG000756	MsaG026821	0.807101	1.011301e-49	1.610741e-47
MsaG000756	MsaG026976	0.812615	6.670177e-51	1.214554e-48
MsaG000756	MsaG027505	0.804435	3.650713e-49	5.462572e-47
MsaG000756	MsaG027557	0.822121	4.941649e-53	1.149702e-50
MsaG000756	MsaG027725	0.829411	9.376457e-55	2.668128e-52
MsaG000756	MsaG027842	0.825860	6.618639e-54	1.705034e-51
MsaG000756	MsaG027853	0.817938	4.431050e-52	9.233892e-50
MsaG000756	MsaG027991	0.800853	1.984806e-48	2.735741e-46
MsaG000756	MsaG028107	0.800390	2.464354e-48	3.361487e-46
MsaG000756	MsaG028199	0.802411	9.546406e-49	1.363245e-46
MsaG000756	MsaG028515	0.803063	7.010373e-49	1.016183e-46
MsaG000756	MsaG028480	0.817198	6.494630e-52	1.327902e-49
MsaG000756	MsaG028635	0.819083	2.444828e-52	5.248754e-50
MsaG000756	MsaG029066	0.849168	7.298778e-60	3.845195e-57
MsaG000756	MsaG029545	0.822109	4.971928e-53	1.156381e-50
MsaG000756	MsaG029792	0.811424	1.208900e-50	2.137555e-48
MsaG000756	MsaG030992	0.812059	8.808518e-51	1.581918e-48
MsaG000756	MsaG032260	0.832740	1.440144e-55	4.511829e-53
MsaG000756	MsaG032764	0.816472	9.435319e-52	1.893306e-49
MsaG000756	MsaG034130	0.845015	9.904532e-59	4.541300e-56
MsaG000756	MsaG034781	0.822729	3.575112e-53	8.455200e-51
MsaG000756	MsaG034840	0.814437	2.663230e-51	5.075796e-49
MsaG000756	MsaG040566	0.812062	8.797282e-51	1.579991e-48
MsaG000756	MsaG040850	0.810714	1.720311e-50	2.989353e-48
MsaG000756	MsaG041141	0.807943	6.715427e-50	1.091375e-47
MsaG000756	MsaG041224	0.851866	1.284444e-60	7.426302e-58
MsaG000756	MsaG041453	0.823700	2.125865e-53	5.161900e-51
MsaG000756	MsaG041906	0.814494	2.586751e-51	4.937007e-49
MsaG000756	MsaG041990	0.803783	4.982097e-49	7.342831e-47
MsaG000756	MsaG043880	0.812341	7.650658e-51	1.383648e-48
MsaG000756	MsaG044855	0.806726	1.213173e-49	1.915286e-47
MsaG000756	MsaG045060	0.819153	2.356871e-52	5.069295e-50
MsaG000756	MsaG045061	0.833963	7.163142e-56	2.326083e-53
MsaG000756	MsaG045062	0.824997	1.056767e-53	2.658104e-51
MsaG000756	MsaG045093	0.820820	9.834158e-53	2.210236e-50
MsaG000756	MsaG045130	0.807069	1.027090e-49	1.634654e-47
MsaG000756	MsaG045148	0.806893	1.118728e-49	1.773105e-47
MsaG000756	MsaG045360	0.840786	1.305547e-57	5.223653e-55
MsaG000756	MsaG045492	0.816912	7.523496e-52	1.526953e-49
MsaG000756	MsaG045517	0.806507	1.348394e-49	2.117874e-47
MsaG000756	MsaG046114	0.813393	4.512194e-51	8.377366e-49
MsaG000756	MsaG046202	0.837213	1.087683e-56	3.894144e-54
MsaG000756	MsaG046265	0.809144	3.731835e-50	6.242698e-48
MsaG000756	MsaG046528	0.836159	2.013949e-56	6.984610e-54
MsaG000756	MsaG046701	0.834334	5.786112e-56	1.899994e-53
MsaG000756	MsaG046831	0.816413	9.724072e-52	1.948339e-49
MsaG000756	MsaG047096	0.808411	5.344009e-50	8.782974e-48
MsaG000756	MsaG002430	0.822975	3.135150e-53	7.464191e-51
MsaG000756	MsaG000809	0.803410	5.948667e-49	8.692085e-47
MsaG000756	MsaG002954	0.823012	3.072841e-53	7.323185e-51
MsaG000756	MsaG001894	0.828655	1.426975e-54	3.974559e-52
MsaG000756	MsaG001560	0.802893	7.599527e-49	1.097258e-46
MsaG000756	MsaG008139	0.850275	3.593743e-60	1.965919e-57
MsaG000756	MsaG010582	0.826429	4.852133e-54	1.269902e-51
MsaG000756	MsaG014412	0.816693	8.423232e-52	1.699853e-49
MsaG000756	MsaG013205	0.817797	4.766631e-52	9.897126e-50
MsaG000756	MsaG014339	0.809725	2.804607e-50	4.757716e-48
MsaG000756	MsaG013041	0.806316	1.479289e-49	2.312967e-47
MsaG000756	MsaG013392	0.877223	1.558950e-68	2.476386e-65
MsaG000756	MsaG022126	0.827689	2.432330e-54	6.593683e-52
MsaG000756	MsaG018951	0.819522	1.944166e-52	4.222095e-50
MsaG000756	MsaG020283	0.837609	8.624131e-57	3.125195e-54
MsaG000756	MsaG026455	0.802009	1.153433e-48	1.632008e-46
MsaG000756	MsaG025025	0.817540	5.445147e-52	1.123115e-49
MsaG000756	MsaG033048	0.817674	5.080575e-52	1.051511e-49
MsaG000756	MsaG032891	0.812943	5.657170e-51	1.038573e-48
MsaG000756	MsaG033256	0.806924	1.102230e-49	1.748211e-47
MsaG000756	MsaG034732	0.869796	4.809911e-66	5.526067e-63
MsaG000756	MsaG033101	0.827064	3.428186e-54	9.131669e-52
MsaG000756	MsaG032292	0.808787	4.446268e-50	7.374109e-48
MsaG000756	MsaG032664	0.822735	3.562953e-53	8.427907e-51
MsaG000756	MsaG032074	0.854913	1.732293e-61	1.115617e-58
MsaG000756	MsaG030780	0.824503	1.380282e-53	3.425338e-51
MsaG000756	MsaG035285	0.801781	1.284518e-48	1.808080e-46
MsaG000756	MsaG037821	0.830781	4.360066e-55	1.290319e-52
MsaG000756	MsaG037450	0.807775	7.290533e-50	1.180030e-47
MsaG000756	MsaG037381	0.809863	2.619602e-50	4.458767e-48
MsaG000756	MsaG035348	0.814493	2.588427e-51	4.940059e-49
MsaG000756	MsaG038283	0.829322	9.854860e-55	2.797048e-52
MsaG000756	MsaG036877	0.842269	5.331402e-58	2.236089e-55
MsaG000756	MsaG045038	0.820833	9.768169e-53	2.196116e-50
MsaG000756	MsaG043656	0.818036	4.212156e-52	8.799959e-50
MsaG000756	MsaG041375	0.817086	6.879900e-52	1.402626e-49

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG000756	MtrunA17_Chr7g0255491	57.200	250	88	4	20	250	1	250	9.67e-80	243

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 106 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGAACAATACCTTGCCTTCT+TGG	0.194452	1:-10443790	MsaT000756.1:CDS
CCCCTCACAACACCACAATT+TGG	0.206201	1:-10443719	MsaT000756.1:CDS
TCTTGGCTTGGTTCACCTTC+TGG	0.208371	1:-10443773	MsaT000756.1:CDS
TTGTTCACATGGGCGCCAAC+TGG	0.244584	1:+10443806	None:intergenic
GGTGTTGTGAGGGGTGAATT+TGG	0.287240	1:+10443728	None:intergenic
TATAAGACATAAATCTTAAA+GGG	0.300674	1:+10443406	None:intergenic
GAAATTTGGATGCCCTTGAT+AGG	0.340355	1:+10443850	None:intergenic
CCCTCACAACACCACAATTT+GGG	0.344308	1:-10443718	MsaT000756.1:CDS
CAGGAAATTCTCTACTTATC+AGG	0.361888	1:-10444011	MsaT000756.1:CDS
TTCGCCCTTCTCCAAGGCTT+TGG	0.364197	1:+10444114	None:intergenic
AAGTTAGCACTACGGAAATT+TGG	0.364201	1:+10443836	None:intergenic
AAAGTCAAACACTTCGGGTT+CGG	0.369088	1:-10443645	MsaT000756.1:CDS
GAGGTTGGTGGTATTCCCTT+TGG	0.369855	1:+10444196	None:intergenic
AGGCTTTGGAAGTGGGCATT+GGG	0.371713	1:+10444128	None:intergenic
TTGGGCGGAAGCCAAGCCTT+AGG	0.373136	1:+10444146	None:intergenic
CTTCTCCAAGGCTTTGGAAG+TGG	0.377232	1:+10444120	None:intergenic
AAGTCAAACACTTCGGGTTC+GGG	0.381297	1:-10443644	MsaT000756.1:CDS
TGCTGCTGATGAACCTTTAC+CGG	0.384228	1:-10444071	MsaT000756.1:CDS
AATACCTTGCCTTCTTGGCT+TGG	0.386051	1:-10443785	MsaT000756.1:CDS
TTCTCTACTTATCAGGCTCT+TGG	0.389156	1:-10444004	MsaT000756.1:CDS
AGAATTTCCATCGGAAATGC+TGG	0.407959	1:-10444283	MsaT000756.1:CDS
TACTGGAGAAGGCATAATTC+AGG	0.408403	1:-10443516	MsaT000756.1:CDS
CCACAAAAGTCAAACACTTC+GGG	0.409280	1:-10443650	MsaT000756.1:CDS
GGTTCACCTTCTGGTGGCTA+TGG	0.410242	1:-10443764	MsaT000756.1:CDS
TTCTCCAAGGCTTTGGAAGT+GGG	0.410767	1:+10444121	None:intergenic
AAGGCTTTGGAAGTGGGCAT+TGG	0.413114	1:+10444127	None:intergenic
TAGGGAGTAGGACTTGAAAA+TGG	0.414467	1:+10443869	None:intergenic
GGACACGCTTATGACCGTTT+TGG	0.423141	1:+10443975	None:intergenic
GTAGGATCACGAGATAATAA+TGG	0.426831	1:+10443536	None:intergenic
AAAACGGTCATAAGCGTGTC+CGG	0.433161	1:-10443973	MsaT000756.1:CDS
TTATTATCTCGTGATCCTAC+TGG	0.438584	1:-10443533	MsaT000756.1:CDS
TTCACGTCTTGCTCCGGTAA+AGG	0.446596	1:+10444058	None:intergenic
TCAAGTCCTACTCCCTATCA+AGG	0.460041	1:-10443863	MsaT000756.1:CDS
CCCAAATTGTGGTGTTGTGA+GGG	0.460530	1:+10443718	None:intergenic
GATTAGCAGCTACGATCCTT+CGG	0.464322	1:+10443906	None:intergenic
TCACCTTCTGGTGGCTATGG+AGG	0.469395	1:-10443761	MsaT000756.1:CDS
CACCTTCTGGTGGCTATGGA+GGG	0.473697	1:-10443760	MsaT000756.1:CDS
AAACCTCAAGCGCAAAATGA+TGG	0.477017	1:-10444254	MsaT000756.1:CDS
TGGGCGGAAGCCAAGCCTTA+GGG	0.484232	1:+10444147	None:intergenic
GTTGATGATGAGGGCACATT+GGG	0.485254	1:+10443488	None:intergenic
AATTCCTTCACGTCTTGCTC+CGG	0.485955	1:+10444052	None:intergenic
TTCTCCGAGGTTGATTGAGT+TGG	0.486064	1:+10443446	None:intergenic
TGTTCACATGGGCGCCAACT+GGG	0.491409	1:+10443807	None:intergenic
GCGCAAAATGATGGAGGAGC+AGG	0.494153	1:-10444245	MsaT000756.1:CDS
TTGAGGATTTGCTGACCCTA+AGG	0.499838	1:-10444162	MsaT000756.1:CDS
GATTGAGTTGGTTCCTCTGA+GGG	0.507541	1:+10443458	None:intergenic
TTCCCTGTCAGTACTGTGAC+AGG	0.510555	1:-10444030	MsaT000756.1:CDS
TCAAACTCCTCGATTGGCTG+AGG	0.513629	1:-10443603	MsaT000756.1:CDS
GAAGGTGAACCAAGCCAAGA+AGG	0.514184	1:+10443776	None:intergenic
CACTTCCAAAGCCTTGGAGA+AGG	0.514520	1:-10444119	MsaT000756.1:CDS
TCTACTTATCAGGCTCTTGG+AGG	0.515170	1:-10444001	MsaT000756.1:CDS
GATTTGCTGACCCTAAGGCT+TGG	0.515203	1:-10444157	MsaT000756.1:CDS
AAATTTGGATGCCCTTGATA+GGG	0.517754	1:+10443851	None:intergenic
AATGCCCACTTCCAAAGCCT+TGG	0.518064	1:-10444125	MsaT000756.1:CDS
TCAACATCTGATTCAGAGGT+TGG	0.520729	1:+10444181	None:intergenic
AGCTAATCAAACTCCTCGAT+TGG	0.520876	1:-10443609	MsaT000756.1:CDS
TCCACAAAAGTCAAACACTT+CGG	0.524677	1:-10443651	MsaT000756.1:CDS
CTTGAAAATGGATGAGGGTA+TGG	0.526376	1:+10443881	None:intergenic
GAATTTCCATCGGAAATGCT+GGG	0.539209	1:-10444282	MsaT000756.1:CDS
AAAATCAGAGAAGGAGCCAA+AGG	0.542845	1:-10444212	MsaT000756.1:CDS
TGGCTTGGTTCACCTTCTGG+TGG	0.546245	1:-10443770	MsaT000756.1:CDS
GTAGGACTTGAAAATGGATG+AGG	0.549069	1:+10443875	None:intergenic
TCCCAAATTGTGGTGTTGTG+AGG	0.552382	1:+10443717	None:intergenic
TGAATTATGCCTTCTCCAGT+AGG	0.553893	1:+10443518	None:intergenic
TTTCCTGTCACAGTACTGAC+AGG	0.555350	1:+10444027	None:intergenic
ACTTCCAAAGCCTTGGAGAA+GGG	0.557599	1:-10444118	MsaT000756.1:CDS
GGATGCCCTTGATAGGGAGT+AGG	0.571516	1:+10443857	None:intergenic
CAAACTCCTCGATTGGCTGA+GGG	0.571646	1:-10443602	MsaT000756.1:CDS
TGAAGGTTCGCCCTTCTCCA+AGG	0.573870	1:+10444108	None:intergenic
TCTCGTGATCCTACTGGAGA+AGG	0.573926	1:-10443527	MsaT000756.1:CDS
GCTCTTGGAGGACACCAAAA+CGG	0.575138	1:-10443989	MsaT000756.1:CDS
ACATCTGATTCAGAGGTTGG+TGG	0.575544	1:+10444184	None:intergenic
TAGGACTTGAAAATGGATGA+GGG	0.575804	1:+10443876	None:intergenic
ATCCTCAACATCTGATTCAG+AGG	0.577188	1:+10444177	None:intergenic
AAGGCAAGGTATTGTTCACA+TGG	0.578550	1:+10443795	None:intergenic
CTTTGGAAGTGGGCATTGGG+CGG	0.581292	1:+10444131	None:intergenic
AGTTGATGATGAGGGCACAT+TGG	0.583838	1:+10443487	None:intergenic
AACCTCTGAATCAGATGTTG+AGG	0.586720	1:-10444179	MsaT000756.1:CDS
AAACGGTCATAAGCGTGTCC+GGG	0.588037	1:-10443972	MsaT000756.1:CDS
TTTGTCCCCAGCATTTCCGA+TGG	0.589355	1:+10444276	None:intergenic
GCCAGAGTCAAAATCAGAGA+AGG	0.590257	1:-10444221	MsaT000756.1:CDS
TGAACCAAGCCAAGAAGGCA+AGG	0.593315	1:+10443781	None:intergenic
AAATCAGAGAAGGAGCCAAA+GGG	0.593524	1:-10444211	MsaT000756.1:CDS
AAATTAGTCATCCCAAATTG+TGG	0.600013	1:+10443707	None:intergenic
CAAGTCCTACTCCCTATCAA+GGG	0.609231	1:-10443862	MsaT000756.1:CDS
ATAAGACATAAATCTTAAAG+GGG	0.619171	1:+10443407	None:intergenic
TGATTGAGTTGGTTCCTCTG+AGG	0.624213	1:+10443457	None:intergenic
AAGAGATAGATTTACTCCGA+AGG	0.627965	1:-10443922	MsaT000756.1:CDS
GCTAACTTGCACAACCCAGT+TGG	0.635608	1:-10443821	MsaT000756.1:CDS
ATCCCTCCATAGCCACCAGA+AGG	0.636300	1:+10443758	None:intergenic
TCTGCACCCTCAGCCAATCG+AGG	0.645887	1:+10443596	None:intergenic
TTTACCGGAGCAAGACGTGA+AGG	0.645972	1:-10444056	MsaT000756.1:CDS
TAAGACATAAATCTTAAAGG+GGG	0.653670	1:+10443408	None:intergenic
CCTCAAGCGCAAAATGATGG+AGG	0.656497	1:-10444251	MsaT000756.1:CDS
ATGGCTGAGAGAATTTCCAT+CGG	0.660705	1:-10444292	MsaT000756.1:CDS
CCAAATTGTGGTGTTGTGAG+GGG	0.669993	1:+10443719	None:intergenic
GCATTCTGAGATGAACGTGA+AGG	0.671407	1:+10444091	None:intergenic
GGAACCAACTCAATCAACCT+CGG	0.676925	1:-10443450	MsaT000756.1:CDS
AATTTCCATCGGAAATGCTG+GGG	0.677054	1:-10444281	MsaT000756.1:CDS
GGTTGTGCAAGTTAGCACTA+CGG	0.678534	1:+10443828	None:intergenic
ATCAACTCAATCACCCTCAG+AGG	0.680896	1:-10443471	MsaT000756.1:CDS
GGGTGATTGAGTTGATGATG+AGG	0.681787	1:+10443478	None:intergenic
GGTGATTGAGTTGATGATGA+GGG	0.690927	1:+10443479	None:intergenic
ATTCAAGTTGAGTTTCTCCG+AGG	0.691771	1:+10443433	None:intergenic
AGGCAAGGTATTGTTCACAT+GGG	0.701207	1:+10443796	None:intergenic
TTCCTGTCACAGTACTGACA+GGG	0.704758	1:+10444028	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	10443421	10444314	10443421	ID=MsaG000756
Chr1	mRNA	10443421	10444314	10443421	ID=MsaT000756.1;Parent=MsaG000756
Chr1	exon	10443421	10444314	10443421	ID=MsaT000756.1.exon1;Parent=MsaT000756.1
Chr1	CDS	10443421	10444314	10443421	ID=cds.MsaT000756.1;Parent=MsaT000756.1

Gene Sequence

>MsaT000756.1

ATGGCTGAGAGAATTTCCATCGGAAATGCTGGGGACAAAAACCTCAAGCGCAAAATGATGGAGGAGCAGGAGCCAGAGTCAAAATCAGAGAAGGAGCCAAAGGGAATACCACCAACCTCTGAATCAGATGTTGAGGATTTGCTGACCCTAAGGCTTGGCTTCCGCCCAATGCCCACTTCCAAAGCCTTGGAGAAGGGCGAACCTTCACGTTCATCTCAGAATGCTGCTGATGAACCTTTACCGGAGCAAGACGTGAAGGAATTTCCCTGTCAGTACTGTGACAGGAAATTCTCTACTTATCAGGCTCTTGGAGGACACCAAAACGGTCATAAGCGTGTCCGGGTCTTCAAAAAACAGGAAGACAAAAGGAAAGAGATAGATTTACTCCGAAGGATCGTAGCTGCTAATCAACCATACCCTCATCCATTTTCAAGTCCTACTCCCTATCAAGGGCATCCAAATTTCCGTAGTGCTAACTTGCACAACCCAGTTGGCGCCCATGTGAACAATACCTTGCCTTCTTGGCTTGGTTCACCTTCTGGTGGCTATGGAGGGATGCATATGCCAAATTCACCCCTCACAACACCACAATTTGGGATGACTAATTTTTGGCGTGTAGGTCAAAATGCTGAATTGCCAATTCCACAAAAGTCAAACACTTCGGGTTCGGGACTTTTTGCTCAAGCTAATCAAACTCCTCGATTGGCTGAGGGTGCAGAGAGAACTTTCATCGATCAAATTCATTCTCATGCTCTTCCATTATTATCTCGTGATCCTACTGGAGAAGGCATAATTCAGGCAAATCCCAATGTGCCCTCATCATCAACTCAATCACCCTCAGAGGAACCAACTCAATCAACCTCGGAGAAACTCAACTTGAATCTCCCCCTTTAA

Protein sequence

>MsaT000756.1

MAERISIGNAGDKNLKRKMMEEQEPESKSEKEPKGIPPTSESDVEDLLTLRLGFRPMPTSKALEKGEPSRSSQNAADEPLPEQDVKEFPCQYCDRKFSTYQALGGHQNGHKRVRVFKKQEDKRKEIDLLRRIVAANQPYPHPFSSPTPYQGHPNFRSANLHNPVGAHVNNTLPSWLGSPSGGYGGMHMPNSPLTTPQFGMTNFWRVGQNAELPIPQKSNTSGSGLFAQANQTPRLAEGAERTFIDQIHSHALPLLSRDPTGEGIIQANPNVPSSSTQSPSEEPTQSTSEKLNLNLPL*