AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG000853

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG000853 MtrunA17_Chr3g0139671 66.667 165 55 0 34 198 23 187 1.67e-76 250
MsaG000853 MtrunA17_Chr1g0157731 66.667 165 55 0 34 198 29 193 2.60e-76 251
MsaG000853 MtrunA17_Chr7g0238631 63.743 171 61 1 29 199 47 216 2.21e-75 240
MsaG000853 MtrunA17_Chr5g0397841 58.553 152 60 1 42 190 53 204 1.98e-58 194
MsaG000853 MtrunA17_Chr5g0429661 42.188 192 97 5 94 278 120 304 1.03e-37 137
MsaG000853 MtrunA17_Chr5g0429661 39.583 96 55 2 44 138 122 215 1.59e-15 75.9
MsaG000853 MtrunA17_Chr3g0117511 51.562 128 58 1 93 220 180 303 2.79e-37 137
MsaG000853 MtrunA17_Chr3g0117511 41.053 95 55 1 44 138 183 276 5.38e-16 77.8
MsaG000853 MtrunA17_Chr5g0401731 45.455 143 72 2 93 229 12 154 3.75e-37 134
MsaG000853 MtrunA17_Chr4g0058991 51.181 127 58 1 94 220 207 329 1.21e-36 136
MsaG000853 MtrunA17_Chr4g0058991 38.542 96 58 1 43 138 208 302 7.29e-15 74.7
MsaG000853 MtrunA17_Chr4g0053431 49.038 104 53 0 93 196 2 105 5.65e-34 125
MsaG000853 MtrunA17_Chr7g0228531 56.731 104 44 1 93 196 217 319 2.21e-33 127
MsaG000853 MtrunA17_Chr7g0228531 43.158 95 52 2 44 138 220 312 1.11e-16 79.7
MsaG000853 MtrunA17_Chr3g0133601 45.614 114 62 0 93 206 34 147 2.25e-33 122
MsaG000853 MtrunA17_Chr4g0008551 50.000 102 51 0 95 196 37 138 2.47e-33 125
MsaG000853 MtrunA17_Chr4g0008551 28.571 133 91 2 43 175 37 165 1.01e-12 67.8
MsaG000853 MtrunA17_Chr5g0437321 42.667 150 80 3 91 236 14 161 2.68e-32 120
MsaG000853 MtrunA17_Chr6g0454921 49.038 104 53 0 93 196 12 115 3.04e-32 119
MsaG000853 MtrunA17_Chr7g0228481 47.651 149 68 3 93 232 217 364 4.06e-32 123
MsaG000853 MtrunA17_Chr7g0228481 40.000 95 55 2 44 138 220 312 1.18e-13 70.9
MsaG000853 MtrunA17_Chr1g0177901 45.946 148 75 2 107 252 5 149 6.38e-31 115
MsaG000853 MtrunA17_Chr1g0177901 39.535 86 50 2 54 138 3 87 4.34e-13 67.0
MsaG000853 MtrunA17_Chr7g0228401 62.791 86 32 0 107 192 290 375 2.55e-30 119
MsaG000853 MtrunA17_Chr7g0228401 40.476 84 49 1 55 138 290 372 8.62e-13 68.6
MsaG000853 MtrunA17_Chr6g0480581 47.000 100 53 0 96 195 4 103 3.35e-29 111
MsaG000853 MtrunA17_Chr6g0480581 29.897 97 67 1 43 139 3 98 1.27e-11 63.5
MsaG000853 MtrunA17_Chr5g0417621 46.078 102 55 0 96 197 134 235 4.95e-29 115
MsaG000853 MtrunA17_Chr4g0042501 45.545 101 55 0 96 196 105 205 8.43e-29 114
MsaG000853 MtrunA17_Chr6g0460661 45.833 96 52 0 96 191 16 111 3.20e-27 104
MsaG000853 MtrunA17_Chr3g0125801 45.545 101 55 0 96 196 16 116 1.06e-26 106
MsaG000853 MtrunA17_Chr7g0233061 44.595 148 70 4 95 236 179 320 1.99e-26 106
MsaG000853 MtrunA17_Chr7g0233061 36.441 118 64 3 25 138 161 271 8.64e-14 70.9
MsaG000853 MtrunA17_Chr5g0410961 42.975 121 63 3 96 211 14 133 2.47e-26 106
MsaG000853 MtrunA17_Chr3g0115821 40.876 137 75 3 94 225 12 147 6.11e-26 105
MsaG000853 MtrunA17_Chr3g0115821 30.081 123 81 3 44 162 14 135 4.53e-12 65.9
MsaG000853 MtrunA17_Chr2g0309911 48.077 104 51 2 96 197 13 115 1.32e-25 103
MsaG000853 MtrunA17_Chr8g0349261 50.467 107 49 3 94 197 13 118 2.13e-25 102
MsaG000853 MtrunA17_Chr8g0349261 34.951 103 60 4 44 142 15 114 4.83e-12 65.5
MsaG000853 MtrunA17_Chr1g0211161 48.182 110 54 2 90 197 9 117 3.83e-25 100
MsaG000853 MtrunA17_Chr4g0070641 37.762 143 83 2 94 235 12 149 4.27e-25 99.0
MsaG000853 MtrunA17_Chr3g0103281 30.846 201 124 3 96 284 14 211 4.50e-25 102
MsaG000853 MtrunA17_Chr5g0435101 42.718 103 58 1 96 197 13 115 5.51e-25 99.8
MsaG000853 MtrunA17_Chr3g0117091 42.361 144 78 4 94 235 12 152 5.54e-25 102
MsaG000853 MtrunA17_Chr7g0274581 46.602 103 54 1 96 197 14 116 5.55e-25 99.4
MsaG000853 MtrunA17_Chr7g0274581 31.193 109 69 3 44 149 14 119 5.20e-13 67.0
MsaG000853 MtrunA17_Chr7g0254261 45.545 101 55 0 96 196 89 189 6.47e-25 102
MsaG000853 MtrunA17_Chr4g0039971 49.057 106 51 2 94 197 13 117 8.33e-25 102
MsaG000853 MtrunA17_Chr8g0343831 46.602 103 54 1 96 197 10 112 9.68e-25 100
MsaG000853 MtrunA17_Chr1g0187761 47.664 107 53 2 94 198 12 117 1.11e-24 100
MsaG000853 MtrunA17_Chr2g0281071 43.478 115 63 2 91 204 10 123 1.22e-24 101
MsaG000853 MtrunA17_Chr4g0048511 42.609 115 64 2 91 204 10 123 1.26e-24 101
MsaG000853 MtrunA17_Chr4g0048511 32.000 100 66 2 44 142 15 113 9.56e-11 62.0
MsaG000853 MtrunA17_Chr5g0440781 40.141 142 79 4 93 228 11 152 1.34e-24 98.2
MsaG000853 MtrunA17_Chr5g0440781 33.673 98 64 1 42 138 12 109 1.15e-12 65.5
MsaG000853 MtrunA17_Chr2g0328771 38.816 152 87 5 94 241 20 169 1.61e-24 100
MsaG000853 MtrunA17_Chr8g0346561 43.902 123 60 2 94 211 12 130 1.78e-24 100
MsaG000853 MtrunA17_Chr4g0055981 46.078 102 54 1 96 196 57 158 2.42e-24 98.6
MsaG000853 MtrunA17_Chr4g0055981 28.659 164 109 5 16 172 26 188 4.49e-13 67.4
MsaG000853 MtrunA17_Chr1g0186061 47.573 103 51 2 96 196 22 123 2.49e-24 99.0
MsaG000853 MtrunA17_Chr1g0186061 37.864 103 62 2 41 142 19 120 4.84e-12 64.7
MsaG000853 MtrunA17_Chr5g0395281 44.262 122 62 3 94 210 12 132 2.54e-24 100
MsaG000853 MtrunA17_Chr5g0395281 33.000 100 65 2 44 142 14 112 1.29e-12 67.0
MsaG000853 MtrunA17_Chr4g0032401 36.316 190 108 5 91 268 14 202 3.82e-24 100
MsaG000853 MtrunA17_Chr2g0323411 40.984 122 66 3 94 210 12 132 4.79e-24 99.8
MsaG000853 MtrunA17_Chr6g0460671 39.474 114 68 1 95 207 98 211 6.45e-24 99.8
MsaG000853 MtrunA17_Chr6g0483051 36.000 150 94 2 45 193 17 165 7.19e-24 101
MsaG000853 MtrunA17_Chr6g0483051 36.364 143 89 2 47 189 72 212 2.28e-23 100
MsaG000853 MtrunA17_Chr6g0483051 38.542 96 57 2 44 139 120 213 5.51e-12 66.2
MsaG000853 MtrunA17_Chr6g0483051 32.727 110 72 2 86 193 6 115 3.68e-11 63.5
MsaG000853 MtrunA17_Chr4g0070611 37.762 143 83 2 94 235 12 149 7.73e-24 98.6
MsaG000853 MtrunA17_Chr5g0440761 40.141 142 79 4 93 228 11 152 8.09e-24 97.8
MsaG000853 MtrunA17_Chr5g0440761 34.375 96 62 1 44 138 14 109 1.96e-12 66.2
MsaG000853 MtrunA17_Chr5g0417821 41.905 105 60 1 94 197 7 111 9.08e-24 98.2
MsaG000853 MtrunA17_Chr5g0417821 36.792 106 61 3 44 148 9 109 3.42e-11 62.8
MsaG000853 MtrunA17_Chr8g0342541 37.838 148 82 4 96 235 14 159 1.00e-23 99.0
MsaG000853 MtrunA17_Chr8g0342541 33.000 100 65 2 40 138 10 108 7.59e-11 62.0
MsaG000853 MtrunA17_Chr5g0441141 40.141 142 79 4 93 228 11 152 1.04e-23 97.8
MsaG000853 MtrunA17_Chr5g0441141 34.375 96 62 1 44 138 14 109 1.66e-12 66.6
MsaG000853 MtrunA17_Chr3g0099131 43.810 105 58 1 93 196 40 144 1.24e-23 100
MsaG000853 MtrunA17_Chr1g0167691 46.667 105 55 1 94 197 12 116 1.37e-23 97.1
MsaG000853 MtrunA17_Chr4g0022931 46.226 106 56 1 96 200 15 120 1.83e-23 97.1
MsaG000853 MtrunA17_Chr1g0168661 45.192 104 54 2 96 197 23 125 1.98e-23 96.7
MsaG000853 MtrunA17_Chr1g0168661 37.624 101 59 3 44 142 23 121 2.83e-11 62.8
MsaG000853 MtrunA17_Chr8g0354661 47.115 104 54 1 94 196 37 140 2.01e-23 100
MsaG000853 MtrunA17_Chr4g0037141 40.909 110 63 2 96 204 14 122 2.14e-23 97.1
MsaG000853 MtrunA17_Chr4g0037141 33.333 102 66 2 42 142 12 112 1.65e-11 63.5
MsaG000853 MtrunA17_Chr2g0330041 41.538 130 72 3 96 222 14 142 2.29e-23 99.0
MsaG000853 MtrunA17_Chr2g0330041 25.243 206 134 6 40 230 10 210 2.51e-11 63.9
MsaG000853 MtrunA17_Chr4g0022901 46.602 103 54 1 96 197 15 117 3.85e-23 96.3
MsaG000853 MtrunA17_Chr8g0342481 41.270 126 70 3 96 218 14 138 4.43e-23 98.2
MsaG000853 MtrunA17_Chr4g0030881 42.202 109 55 2 96 196 9 117 4.47e-23 95.9
MsaG000853 MtrunA17_Chr4g0030881 34.862 109 62 3 42 142 7 114 7.75e-11 61.2
MsaG000853 MtrunA17_Chr7g0228891 45.283 106 55 2 94 197 12 116 4.58e-23 95.9
MsaG000853 MtrunA17_Chr1g0203411 44.660 103 56 1 96 197 14 116 5.10e-23 96.3
MsaG000853 MtrunA17_Chr4g0022911 45.631 103 55 1 96 197 15 117 5.79e-23 95.9
MsaG000853 MtrunA17_Chr4g0057031 47.115 104 52 2 96 197 14 116 6.96e-23 95.5
MsaG000853 MtrunA17_Chr7g0261281 39.855 138 64 2 94 212 12 149 7.05e-23 95.5
MsaG000853 MtrunA17_Chr7g0261281 29.508 122 81 3 44 164 14 131 2.78e-11 62.8
MsaG000853 MtrunA17_Chr8g0342521 39.310 145 80 5 96 235 14 155 7.56e-23 96.7
MsaG000853 MtrunA17_Chr1g0154031 45.045 111 60 1 94 203 76 186 8.41e-23 97.4
MsaG000853 MtrunA17_Chr1g0154031 37.500 96 58 2 44 138 78 172 6.01e-13 68.6
MsaG000853 MtrunA17_Chr8g0385321 42.718 103 58 1 96 197 14 116 9.30e-23 95.9
MsaG000853 MtrunA17_Chr8g0385321 32.692 104 68 2 40 142 10 112 1.97e-11 63.5
MsaG000853 MtrunA17_Chr3g0110351 46.226 106 54 2 94 197 12 116 9.31e-23 95.9
MsaG000853 MtrunA17_Chr7g0228231 41.667 108 62 1 91 197 11 118 1.01e-22 93.6
MsaG000853 MtrunA17_Chr6g0453471 43.810 105 58 1 94 197 12 116 1.02e-22 96.7
MsaG000853 MtrunA17_Chr5g0441131 36.806 144 80 4 93 226 8 150 1.09e-22 92.8
MsaG000853 MtrunA17_Chr5g0441131 34.343 99 58 2 44 138 11 106 3.44e-13 67.0
MsaG000853 MtrunA17_Chr1g0193371 42.400 125 64 3 94 211 12 135 1.16e-22 96.7
MsaG000853 MtrunA17_Chr1g0193371 31.776 107 71 2 44 149 14 119 2.31e-11 63.9
MsaG000853 MtrunA17_Chr6g0470971 32.447 188 110 4 96 276 16 193 1.17e-22 95.1
MsaG000853 MtrunA17_Chr5g0434571 46.226 106 54 2 94 197 48 152 1.33e-22 96.3
MsaG000853 MtrunA17_Chr7g0275911 43.119 109 53 2 94 197 12 116 1.43e-22 94.4
MsaG000853 MtrunA17_Chr5g0416341 40.404 99 59 0 99 197 29 127 1.58e-22 97.1
MsaG000853 MtrunA17_Chr5g0416341 35.870 92 58 1 47 138 29 119 2.37e-11 63.9
MsaG000853 MtrunA17_Chr3g0088461 43.810 105 58 1 94 197 22 126 1.82e-22 95.5
MsaG000853 MtrunA17_Chr4g0058631 43.103 116 65 1 83 197 1 116 1.84e-22 95.9
MsaG000853 MtrunA17_Chr1g0167661 44.954 109 58 2 94 201 12 119 2.36e-22 93.6
MsaG000853 MtrunA17_Chr8g0387421 44.660 103 56 1 96 197 14 116 2.37e-22 94.7
MsaG000853 MtrunA17_Chr8g0362231 35.714 126 77 1 99 220 25 150 2.87e-22 96.3
MsaG000853 MtrunA17_Chr2g0327821 40.000 110 65 1 89 197 1 110 3.11e-22 92.8
MsaG000853 MtrunA17_Chr4g0022881 37.984 129 79 1 96 223 14 142 3.63e-22 92.4
MsaG000853 MtrunA17_Chr4g0022881 33.000 100 65 2 44 142 14 112 1.05e-13 69.3
MsaG000853 MtrunA17_Chr3g0131121 40.777 103 60 1 96 197 14 116 3.63e-22 94.0
MsaG000853 MtrunA17_Chr3g0131121 35.294 102 64 2 42 142 12 112 3.19e-12 65.9
MsaG000853 MtrunA17_Chr2g0311221 47.917 96 49 1 96 190 16 111 4.51e-22 94.4
MsaG000853 MtrunA17_Chr1g0194951 42.857 105 59 1 94 197 12 116 4.66e-22 94.7
MsaG000853 MtrunA17_Chr1g0203441 42.991 107 60 1 92 197 11 117 5.21e-22 93.2
MsaG000853 MtrunA17_Chr4g0022891 46.535 101 51 2 96 194 14 113 5.38e-22 92.4
MsaG000853 MtrunA17_Chr3g0080861 44.762 105 57 1 94 197 37 141 5.92e-22 95.5
MsaG000853 MtrunA17_Chr4g0042671 43.810 105 58 1 94 197 12 116 6.42e-22 94.7
MsaG000853 MtrunA17_Chr4g0042671 34.000 100 64 2 44 142 14 112 1.49e-11 64.7
MsaG000853 MtrunA17_Chr7g0270891 45.714 105 56 1 94 197 12 116 7.48e-22 94.4
MsaG000853 MtrunA17_Chr7g0270891 34.375 96 61 2 44 138 14 108 6.27e-11 62.4
MsaG000853 MtrunA17_Chr3g0121241 40.179 112 65 2 94 204 42 152 8.51e-22 93.2
MsaG000853 MtrunA17_Chr7g0217741 42.857 105 59 1 94 197 12 116 9.06e-22 93.2
MsaG000853 MtrunA17_Chr2g0323351 45.045 111 58 2 94 202 12 121 1.16e-21 91.7
MsaG000853 MtrunA17_Chr4g0044421 42.857 105 55 2 96 197 14 116 1.74e-21 89.7
MsaG000853 MtrunA17_Chr4g0044421 34.000 100 64 2 44 142 14 112 6.82e-11 60.5
MsaG000853 MtrunA17_Chr1g0193801 43.810 105 58 1 94 197 12 116 1.75e-21 93.6
MsaG000853 MtrunA17_Chr1g0193801 34.375 96 61 2 44 138 14 108 1.86e-11 64.3
MsaG000853 MtrunA17_Chr1g0180391 41.284 109 61 2 93 199 18 125 2.27e-21 90.5
MsaG000853 MtrunA17_Chr1g0194301 33.750 160 99 3 96 249 35 193 2.50e-21 91.3
MsaG000853 MtrunA17_Chr1g0192411 31.651 218 122 7 94 290 12 223 3.01e-21 92.8
MsaG000853 MtrunA17_Chr5g0397231 45.833 96 51 1 96 190 14 109 3.78e-21 92.0
MsaG000853 MtrunA17_Chr7g0240821 40.171 117 66 3 99 212 6 121 5.64e-21 89.4
MsaG000853 MtrunA17_Chr1g0209661 39.623 106 63 1 93 197 26 131 6.02e-21 90.9
MsaG000853 MtrunA17_Chr7g0217221 43.689 103 57 1 96 197 14 116 7.50e-21 89.7
MsaG000853 MtrunA17_Chr7g0247131 53.165 79 35 1 121 197 4 82 1.21e-20 89.4
MsaG000853 MtrunA17_Chr6g0450101 38.889 108 65 1 91 197 11 118 1.37e-20 87.8
MsaG000853 MtrunA17_Chr1g0151941 34.940 166 99 5 96 259 14 172 2.85e-20 87.8
MsaG000853 MtrunA17_Chr7g0254411 38.168 131 77 3 96 222 14 144 2.85e-20 89.4
MsaG000853 MtrunA17_Chr7g0271241 45.455 99 51 2 94 190 12 109 3.52e-20 89.7
MsaG000853 MtrunA17_Chr7g0271241 35.417 96 60 2 44 138 14 108 5.69e-12 65.9
MsaG000853 MtrunA17_Chr4g0068061 40.000 105 62 1 94 197 12 116 4.76e-20 89.0
MsaG000853 MtrunA17_Chr7g0220341 33.758 157 94 2 96 249 27 176 6.62e-20 87.4
MsaG000853 MtrunA17_Chr5g0434831 40.000 105 62 1 94 197 7 111 7.22e-20 85.5
MsaG000853 MtrunA17_Chr6g0452271 41.748 103 59 1 96 197 14 116 2.43e-19 86.7
MsaG000853 MtrunA17_Chr4g0013361 42.056 107 59 3 96 200 12 117 2.54e-19 86.3
MsaG000853 MtrunA17_Chr4g0060721 40.000 115 64 2 96 209 15 125 3.20e-19 86.3
MsaG000853 MtrunA17_Chr8g0334881 43.137 102 56 2 96 195 12 113 3.23e-19 86.3
MsaG000853 MtrunA17_Chr1g0194291 38.835 103 62 1 96 197 23 125 3.45e-19 85.1
MsaG000853 MtrunA17_Chr7g0269831 37.888 161 95 3 94 251 12 170 4.02e-19 86.3
MsaG000853 MtrunA17_Chr2g0322521 46.154 104 55 1 94 196 29 132 6.23e-19 86.3
MsaG000853 MtrunA17_Chr3g0092401 33.544 158 102 3 96 250 15 172 7.14e-19 85.1
MsaG000853 MtrunA17_Chr4g0068921 38.261 115 65 2 93 201 23 137 7.29e-19 82.8
MsaG000853 MtrunA17_Chr5g0434841 40.000 105 62 1 94 197 20 124 1.09e-18 84.7
MsaG000853 MtrunA17_Chr5g0400821 41.346 104 59 2 96 197 14 117 1.13e-18 84.3
MsaG000853 MtrunA17_Chr3g0135311 41.346 104 59 2 96 197 14 117 1.71e-18 84.3
MsaG000853 MtrunA17_Chr7g0264641 40.179 112 64 3 96 204 14 125 1.82e-18 83.2
MsaG000853 MtrunA17_Chr2g0293911 38.261 115 65 2 93 201 23 137 5.47e-18 82.8
MsaG000853 MtrunA17_Chr5g0425591 44.706 85 45 2 93 175 8 92 7.08e-18 77.0
MsaG000853 MtrunA17_Chr6g0487491 36.806 144 80 4 96 228 14 157 7.18e-18 81.6
MsaG000853 MtrunA17_Chr5g0434931 36.893 103 64 1 96 197 37 139 8.03e-18 81.6
MsaG000853 MtrunA17_Chr5g0434931 34.286 105 67 2 39 142 32 135 4.05e-12 65.5
MsaG000853 MtrunA17_Chr3g0099141 41.860 86 49 1 93 177 39 124 1.02e-17 78.2
MsaG000853 MtrunA17_Chr6g0453211 41.000 100 50 2 96 190 14 109 1.12e-17 81.6
MsaG000853 MtrunA17_Chr3g0104501 44.554 101 46 2 47 147 94 184 1.75e-17 79.0
MsaG000853 MtrunA17_Chr7g0228991 37.864 103 63 1 96 197 31 133 2.26e-17 80.5
MsaG000853 MtrunA17_Chr7g0228991 33.333 105 68 2 40 143 27 130 4.03e-11 62.4
MsaG000853 MtrunA17_Chr1g0152011 39.423 104 61 2 96 197 14 117 2.46e-17 81.3
MsaG000853 MtrunA17_Chr5g0434911 36.893 103 64 1 96 197 23 125 2.58e-17 80.1
MsaG000853 MtrunA17_Chr5g0434911 36.190 105 65 2 39 142 18 121 2.78e-12 65.9
MsaG000853 MtrunA17_Chr4g0046181 53.846 65 30 0 88 152 213 277 3.81e-17 80.1
MsaG000853 MtrunA17_Chr4g0028311 40.385 104 60 2 96 197 14 117 4.66e-17 80.1
MsaG000853 MtrunA17_Chr8g0360111 37.374 99 61 1 96 193 27 125 1.85e-16 77.4
MsaG000853 MtrunA17_Chr4g0072751 41.237 97 55 2 96 190 14 110 2.02e-16 78.6
MsaG000853 MtrunA17_Chr2g0327351 36.986 146 76 3 96 225 14 159 3.00e-16 77.8
MsaG000853 MtrunA17_Chr7g0233161 61.404 57 22 0 91 147 294 350 4.23e-16 77.8
MsaG000853 MtrunA17_Chr6g0453751 41.489 94 45 3 91 174 17 110 1.32e-15 72.0
MsaG000853 MtrunA17_Chr7g0229131 41.772 79 46 0 129 207 8 86 1.51e-15 73.2
MsaG000853 MtrunA17_Chr4g0054391 38.144 97 58 2 96 190 14 110 2.86e-15 74.7
MsaG000853 MtrunA17_Chr4g0042611 44.737 76 41 1 94 168 12 87 6.66e-15 68.9
MsaG000853 MtrunA17_Chr5g0395221 40.789 76 44 1 94 168 12 87 1.62e-13 65.1
MsaG000853 MtrunA17_Chr8g0342511 40.789 76 42 2 96 169 14 88 1.03e-12 63.2
MsaG000853 MtrunA17_Chr7g0229101 42.424 66 38 0 129 194 8 73 1.04e-12 65.9
MsaG000853 MtrunA17_Chr2g0323321 40.000 85 48 2 91 173 8 91 1.08e-12 63.5
MsaG000853 MtrunA17_Chr5g0434901 40.909 66 39 0 129 194 9 74 1.45e-12 63.5
MsaG000853 MtrunA17_Chr3g0104491 44.776 67 33 1 134 196 1 67 1.46e-12 66.6
MsaG000853 MtrunA17_Chr8g0342531 37.647 85 49 3 96 177 14 97 3.00e-12 63.9
MsaG000853 MtrunA17_Chr7g0233151 52.941 51 24 0 146 196 1 51 4.74e-12 63.5
MsaG000853 MtrunA17_Chr8g0342461 37.634 93 48 4 96 185 14 99 5.86e-12 62.4
MsaG000853 MtrunA17_Chr8g0342471 36.000 100 44 4 96 192 14 96 6.28e-12 62.4
MsaG000853 MtrunA17_Chr3g0093811 42.029 69 40 0 129 197 18 86 1.59e-11 63.5
MsaG000853 MtrunA17_Chr7g0274481 39.326 89 52 2 94 181 4 91 2.87e-11 64.3
MsaG000853 MtrunA17_Chr7g0274481 35.238 105 65 3 40 143 2 104 4.25e-11 63.5
MsaG000853 MtrunA17_Chr2g0294811 38.158 76 46 1 94 168 12 87 5.81e-11 58.9
MsaG000853 MtrunA17_Chr7g0238651 33.333 114 68 2 99 204 10 123 8.13e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG000853 AT4G32730.1 66.071 168 57 0 31 198 22 189 1.98e-78 253
MsaG000853 AT4G32730.5 66.071 168 57 0 31 198 22 189 1.58e-77 254
MsaG000853 AT4G32730.4 66.071 168 57 0 31 198 22 189 1.58e-77 254
MsaG000853 AT4G32730.3 66.071 168 57 0 31 198 22 189 1.58e-77 254
MsaG000853 AT4G32730.2 66.071 168 57 0 31 198 22 189 1.58e-77 254
MsaG000853 AT5G02320.1 57.073 205 81 3 1 199 27 230 2.10e-77 246
MsaG000853 AT5G02320.2 57.073 205 81 3 1 199 27 230 2.10e-77 246
MsaG000853 AT5G02320.3 65.269 167 57 1 33 199 5 170 4.52e-77 243
MsaG000853 AT4G00540.2 55.769 208 82 3 1 198 1 208 7.21e-75 235
MsaG000853 AT4G00540.1 55.340 206 84 2 1 198 1 206 1.09e-73 233
MsaG000853 AT5G11510.5 58.242 182 76 0 17 198 2 183 1.65e-73 240
MsaG000853 AT5G11510.2 58.242 182 76 0 17 198 2 183 1.94e-73 241
MsaG000853 AT5G11510.3 58.242 182 76 0 17 198 2 183 7.34e-73 241
MsaG000853 AT5G11510.1 58.242 182 76 0 17 198 2 183 7.34e-73 241
MsaG000853 AT5G11510.4 58.242 182 76 0 17 198 2 183 7.34e-73 241
MsaG000853 AT3G09370.2 63.253 166 60 1 34 199 74 238 4.05e-72 231
MsaG000853 AT3G09370.1 63.253 166 60 1 34 199 69 233 4.32e-72 231
MsaG000853 AT3G09370.3 63.253 166 60 1 34 199 82 246 7.50e-72 230
MsaG000853 AT3G27785.1 60.194 103 41 0 94 196 187 289 5.17e-38 139
MsaG000853 AT3G27785.1 38.739 111 65 2 30 138 173 282 2.19e-18 85.5
MsaG000853 AT3G50060.1 40.260 154 77 2 93 231 3 156 6.13e-38 136
MsaG000853 AT4G18770.1 55.357 112 50 0 86 197 207 318 1.57e-37 138
MsaG000853 AT4G18770.1 44.118 102 54 2 39 138 210 310 6.78e-19 86.7
MsaG000853 AT5G58850.1 53.846 104 48 0 93 196 102 205 1.14e-35 133
MsaG000853 AT3G09230.1 45.652 138 67 2 93 222 52 189 1.35e-35 132
MsaG000853 AT3G09230.1 35.922 103 65 1 40 142 51 152 1.32e-13 70.9
MsaG000853 AT5G11050.1 39.881 168 98 2 31 196 39 205 1.63e-35 132
MsaG000853 AT5G40360.1 55.085 118 48 3 93 209 154 267 4.36e-35 130
MsaG000853 AT5G40360.1 44.211 95 52 1 44 138 158 251 1.80e-17 82.0
MsaG000853 AT2G23290.1 52.885 104 49 0 93 196 10 113 1.22e-34 128
MsaG000853 AT5G67300.1 50.962 104 51 0 93 196 3 106 1.29e-34 127
MsaG000853 AT4G37260.1 46.667 120 60 1 91 210 8 123 2.32e-34 127
MsaG000853 AT2G25230.1 45.270 148 70 3 93 240 23 159 1.03e-33 123
MsaG000853 AT2G25230.1 37.895 95 58 1 44 138 26 119 5.79e-11 62.0
MsaG000853 AT3G55730.1 50.980 102 50 0 95 196 55 156 3.47e-33 126
MsaG000853 AT3G55730.1 33.010 103 68 1 40 142 52 153 2.06e-11 64.3
MsaG000853 AT3G29020.1 42.982 114 65 0 96 209 65 178 3.75e-31 117
MsaG000853 AT3G29020.2 42.982 114 65 0 96 209 67 180 2.64e-30 116
MsaG000853 AT2G39880.1 46.078 102 55 0 95 196 49 150 3.41e-30 117
MsaG000853 AT1G26780.1 44.737 114 63 0 94 207 96 209 4.88e-30 115
MsaG000853 AT1G69560.1 46.078 102 55 0 96 197 107 208 5.21e-30 116
MsaG000853 AT1G69560.2 46.078 102 55 0 96 197 123 224 5.90e-30 116
MsaG000853 AT1G17950.1 45.545 101 55 0 96 196 5 105 8.03e-30 114
MsaG000853 AT1G17950.1 29.897 97 67 1 43 139 4 99 3.60e-11 62.8
MsaG000853 AT4G33450.1 44.444 117 65 0 92 208 15 131 1.18e-29 113
MsaG000853 AT4G33450.1 34.884 86 55 1 44 129 19 103 1.50e-11 63.9
MsaG000853 AT1G26780.2 44.737 114 63 0 94 207 96 209 2.00e-29 115
MsaG000853 AT5G40430.1 48.544 103 52 1 93 195 51 152 1.68e-28 110
MsaG000853 AT5G40430.1 40.625 96 55 2 43 138 53 146 2.69e-12 65.9
MsaG000853 AT3G18100.1 38.356 146 89 1 44 189 495 639 1.99e-28 115
MsaG000853 AT3G18100.1 37.179 156 95 3 45 198 443 597 3.15e-26 108
MsaG000853 AT3G18100.1 41.121 107 56 3 38 141 543 645 6.70e-17 81.6
MsaG000853 AT3G18100.1 31.707 123 82 2 74 194 420 542 6.80e-13 69.3
MsaG000853 AT3G18100.3 38.356 146 89 1 44 189 447 591 2.30e-28 115
MsaG000853 AT3G18100.3 37.179 156 95 3 45 198 395 549 4.09e-26 108
MsaG000853 AT3G18100.3 41.121 107 56 3 38 141 495 597 9.00e-17 81.3
MsaG000853 AT3G18100.3 31.707 123 82 2 74 194 372 494 8.71e-13 69.3
MsaG000853 AT3G18100.4 38.356 146 89 1 44 189 334 478 2.51e-28 115
MsaG000853 AT3G18100.4 37.179 156 95 3 45 198 282 436 5.13e-26 108
MsaG000853 AT3G18100.4 41.121 107 56 3 38 141 382 484 8.64e-17 81.3
MsaG000853 AT3G18100.4 31.707 123 82 2 74 194 259 381 9.72e-13 68.9
MsaG000853 AT3G18100.2 38.356 146 89 1 44 189 282 426 2.54e-28 114
MsaG000853 AT3G18100.2 37.179 156 95 3 45 198 230 384 5.03e-26 108
MsaG000853 AT3G18100.2 41.121 107 56 3 38 141 330 432 1.08e-16 80.9
MsaG000853 AT3G18100.2 31.707 123 82 2 74 194 207 329 9.15e-13 68.9
MsaG000853 AT2G13960.1 49.074 108 48 3 1 102 27 133 4.08e-27 103
MsaG000853 AT1G73410.2 44.554 101 56 0 96 196 6 106 1.07e-26 104
MsaG000853 AT1G73410.1 44.554 101 56 0 96 196 6 106 1.49e-26 105
MsaG000853 AT4G28110.1 44.660 103 56 1 96 197 14 116 1.56e-26 105
MsaG000853 AT3G61250.1 48.673 113 54 3 94 204 12 122 3.74e-26 105
MsaG000853 AT3G61250.1 35.294 102 60 3 44 142 14 112 9.00e-13 67.8
MsaG000853 AT2G13960.2 57.317 82 34 1 21 102 18 98 4.62e-26 100
MsaG000853 AT5G17800.1 43.564 101 57 0 96 196 93 193 9.56e-26 104
MsaG000853 AT4G05100.1 44.643 112 60 2 94 204 13 123 1.70e-25 103
MsaG000853 AT5G16770.4 43.443 122 63 3 94 210 12 132 2.23e-25 103
MsaG000853 AT5G16770.4 34.000 100 64 2 44 142 14 112 4.97e-12 65.9
MsaG000853 AT5G16770.3 43.443 122 63 3 94 210 12 132 2.23e-25 103
MsaG000853 AT5G16770.3 34.000 100 64 2 44 142 14 112 4.97e-12 65.9
MsaG000853 AT4G17785.2 44.144 111 58 3 96 204 15 123 2.55e-25 103
MsaG000853 AT3G12720.1 45.133 113 58 3 96 206 24 134 2.74e-25 103
MsaG000853 AT4G17785.1 44.144 111 58 3 96 204 15 123 3.05e-25 103
MsaG000853 AT5G16770.1 43.443 122 63 3 94 210 12 132 3.10e-25 103
MsaG000853 AT5G16770.1 34.000 100 64 2 44 142 14 112 5.74e-12 65.9
MsaG000853 AT5G16770.2 43.443 122 63 3 94 210 12 132 3.10e-25 103
MsaG000853 AT5G16770.2 34.000 100 64 2 44 142 14 112 5.74e-12 65.9
MsaG000853 AT2G47190.1 42.453 106 60 1 93 197 19 124 4.01e-25 102
MsaG000853 AT5G14750.1 38.298 141 79 3 91 224 13 152 4.60e-25 100
MsaG000853 AT5G14750.1 38.614 101 58 3 44 142 18 116 4.04e-13 67.4
MsaG000853 AT1G56160.1 47.115 104 52 2 96 197 16 118 7.04e-25 101
MsaG000853 AT3G12820.1 47.115 104 52 2 96 197 16 118 7.81e-25 100
MsaG000853 AT5G40330.1 35.032 157 84 4 96 246 14 158 9.98e-25 99.8
MsaG000853 AT5G40330.1 34.862 109 67 3 37 143 7 113 1.87e-12 65.9
MsaG000853 AT5G65230.1 47.170 106 53 2 94 197 12 116 1.07e-24 101
MsaG000853 AT1G35515.1 41.818 110 62 2 96 204 14 122 1.40e-24 99.0
MsaG000853 AT1G35515.1 33.000 100 65 2 44 142 14 112 8.93e-11 60.8
MsaG000853 AT1G34670.1 41.732 127 68 3 94 215 12 137 1.69e-24 102
MsaG000853 AT3G11440.2 46.667 105 53 2 94 196 41 144 1.73e-24 103
MsaG000853 AT3G11440.2 35.417 96 60 2 44 138 43 137 5.67e-11 63.2
MsaG000853 AT4G38620.1 35.714 154 95 4 96 247 14 165 1.75e-24 100
MsaG000853 AT4G38620.1 34.314 102 65 2 42 142 12 112 5.13e-12 65.5
MsaG000853 AT3G11440.3 46.667 105 53 2 94 196 41 144 2.39e-24 103
MsaG000853 AT3G11440.3 35.417 96 60 2 44 138 43 137 9.35e-11 62.8
MsaG000853 AT3G11440.4 46.667 105 53 2 94 196 41 144 2.39e-24 103
MsaG000853 AT3G11440.4 35.417 96 60 2 44 138 43 137 9.35e-11 62.8
MsaG000853 AT3G11440.1 46.667 105 53 2 94 196 41 144 2.39e-24 103
MsaG000853 AT3G11440.1 35.417 96 60 2 44 138 43 137 9.35e-11 62.8
MsaG000853 AT4G21440.1 43.750 112 61 2 94 204 12 122 2.57e-24 101
MsaG000853 AT4G12350.1 34.197 193 121 4 96 286 14 202 2.71e-24 100
MsaG000853 AT1G16490.1 43.478 115 56 2 96 205 16 126 3.12e-24 99.4
MsaG000853 AT5G12870.1 45.631 103 55 1 96 197 20 122 3.31e-24 99.8
MsaG000853 AT5G60890.1 44.660 103 56 1 96 197 14 116 5.06e-24 99.4
MsaG000853 AT3G02940.2 44.762 105 57 1 94 197 12 116 5.39e-24 99.8
MsaG000853 AT3G23250.1 35.450 189 97 4 94 281 12 176 5.44e-24 99.0
MsaG000853 AT1G06180.1 43.750 128 66 4 94 218 12 136 5.49e-24 98.2
MsaG000853 AT5G55020.1 47.573 103 53 1 94 195 26 128 5.73e-24 102
MsaG000853 AT5G39700.1 36.283 113 72 0 97 209 57 169 6.27e-24 96.7
MsaG000853 AT2G26960.1 45.946 111 59 1 94 203 20 130 6.31e-24 101
MsaG000853 AT2G26960.1 38.144 97 58 2 43 138 21 116 1.44e-12 68.2
MsaG000853 AT3G27920.1 40.000 125 72 2 91 212 11 135 6.51e-24 97.4
MsaG000853 AT3G27920.1 34.513 113 70 3 32 142 4 114 9.06e-12 63.9
MsaG000853 AT1G79180.1 47.573 103 53 1 96 197 16 118 8.28e-24 99.0
MsaG000853 AT3G02940.1 44.762 105 57 1 94 197 12 116 8.48e-24 99.4
MsaG000853 AT3G02940.3 44.762 105 57 1 94 197 12 116 8.48e-24 99.4
MsaG000853 AT5G54230.1 42.727 110 61 2 96 204 14 122 8.65e-24 99.4
MsaG000853 AT4G34990.1 39.259 135 78 3 96 227 14 147 1.04e-23 98.2
MsaG000853 AT5G06100.1 44.444 117 59 3 82 196 23 135 1.10e-23 100
MsaG000853 AT5G10280.1 46.226 106 54 2 94 197 12 116 1.38e-23 99.0
MsaG000853 AT5G10280.1 34.000 100 64 2 44 142 14 112 2.96e-11 63.5
MsaG000853 AT5G06100.5 44.444 117 59 3 82 196 23 135 1.42e-23 100
MsaG000853 AT5G06100.2 44.444 117 59 3 82 196 23 135 1.42e-23 100
MsaG000853 AT5G06100.3 44.444 117 59 3 82 196 23 135 1.42e-23 100
MsaG000853 AT5G06100.4 44.444 117 59 3 82 196 23 135 1.42e-23 100
MsaG000853 AT3G53200.1 42.308 104 59 1 94 196 9 112 1.51e-23 97.1
MsaG000853 AT3G53200.1 34.000 100 62 3 44 141 11 108 3.01e-11 62.8
MsaG000853 AT5G59780.3 42.342 111 63 1 88 197 2 112 2.66e-23 96.3
MsaG000853 AT5G59780.3 36.634 101 60 3 44 142 10 108 2.54e-11 62.8
MsaG000853 AT4G26930.1 46.602 103 54 1 94 195 19 121 2.87e-23 99.0
MsaG000853 AT4G01680.3 42.069 145 70 5 94 226 12 154 3.03e-23 96.3
MsaG000853 AT1G57560.2 37.162 148 85 3 94 234 12 158 3.14e-23 96.7
MsaG000853 AT2G32460.1 47.115 104 54 1 94 196 18 121 3.41e-23 99.4
MsaG000853 AT2G32460.2 47.115 104 54 1 94 196 6 109 3.61e-23 99.4
MsaG000853 AT3G08500.1 43.925 107 59 1 92 197 28 134 3.71e-23 97.8
MsaG000853 AT4G13480.1 46.154 104 53 2 96 197 8 110 4.30e-23 96.3
MsaG000853 AT3G48920.1 45.714 105 56 1 96 199 20 124 5.02e-23 95.9
MsaG000853 AT4G22680.1 38.158 152 84 5 96 245 14 157 6.89e-23 95.9
MsaG000853 AT3G13890.2 35.616 146 92 2 96 239 14 159 7.82e-23 97.1
MsaG000853 AT3G30210.1 44.554 101 55 1 96 195 29 129 1.15e-22 95.5
MsaG000853 AT1G57560.1 34.896 192 106 7 94 283 12 186 1.17e-22 95.9
MsaG000853 AT5G26660.1 47.170 106 53 2 94 197 12 116 1.31e-22 96.7
MsaG000853 AT5G14340.1 44.340 106 56 2 94 197 24 128 1.33e-22 95.1
MsaG000853 AT1G66230.1 46.226 106 54 2 94 197 12 116 1.70e-22 95.1
MsaG000853 AT5G56110.1 32.680 153 98 3 96 247 14 162 1.76e-22 95.5
MsaG000853 AT4G09460.1 40.909 110 63 2 96 204 14 122 1.99e-22 94.0
MsaG000853 AT3G46130.1 43.689 103 57 1 96 197 11 113 2.02e-22 94.4
MsaG000853 AT3G46130.1 37.624 101 59 3 44 142 11 109 9.36e-12 64.3
MsaG000853 AT1G09540.1 46.226 106 54 2 94 197 12 116 2.51e-22 95.9
MsaG000853 AT1G22640.1 40.000 110 64 2 96 204 14 122 2.87e-22 94.0
MsaG000853 AT1G22640.1 35.000 100 63 2 44 142 14 112 4.66e-13 68.2
MsaG000853 AT4G01680.1 41.085 129 72 3 94 221 12 137 2.91e-22 95.1
MsaG000853 AT1G18570.1 41.905 105 60 1 94 197 13 117 3.00e-22 95.5
MsaG000853 AT1G74080.1 41.441 111 59 2 94 198 12 122 3.01e-22 95.1
MsaG000853 AT1G74080.1 32.000 100 66 2 44 142 14 112 1.05e-11 65.1
MsaG000853 AT3G24310.1 44.660 103 54 2 96 196 20 121 3.22e-22 94.0
MsaG000853 AT3G01140.1 44.037 109 52 2 94 197 55 159 3.70e-22 95.9
MsaG000853 AT3G01140.2 44.037 109 52 2 94 197 12 116 3.71e-22 95.1
MsaG000853 AT1G63910.1 44.660 103 56 1 96 197 14 116 3.74e-22 95.5
MsaG000853 AT1G74430.1 43.810 105 58 1 94 197 12 116 4.76e-22 93.6
MsaG000853 AT2G31180.1 43.363 113 61 2 96 205 14 126 5.09e-22 92.8
MsaG000853 AT5G15310.4 38.095 126 76 2 94 218 12 136 6.67e-22 92.4
MsaG000853 AT1G68320.1 39.623 106 63 1 93 197 18 123 8.38e-22 93.2
MsaG000853 AT1G25340.1 41.748 103 59 1 96 197 20 122 1.03e-21 92.8
MsaG000853 AT3G13890.1 34.194 155 91 3 96 239 14 168 1.08e-21 94.0
MsaG000853 AT5G15310.1 42.857 105 59 1 94 197 12 116 1.15e-21 93.6
MsaG000853 AT2G16720.1 41.228 114 57 3 96 204 14 122 1.21e-21 92.4
MsaG000853 AT5G15310.2 42.857 105 59 1 94 197 12 116 1.32e-21 93.2
MsaG000853 AT5G16600.1 45.283 106 55 2 94 197 12 116 1.46e-21 93.2
MsaG000853 AT1G14350.2 38.384 99 61 0 99 197 28 126 1.65e-21 94.4
MsaG000853 AT1G14350.1 38.384 99 61 0 99 197 28 126 1.65e-21 94.4
MsaG000853 AT5G62470.1 43.137 102 58 0 96 197 14 115 1.84e-21 93.2
MsaG000853 AT3G13540.1 31.902 163 92 6 96 253 25 173 2.12e-21 91.3
MsaG000853 AT1G18710.1 41.121 107 54 2 96 197 14 116 2.25e-21 91.7
MsaG000853 AT1G25340.2 41.176 102 56 1 96 197 20 117 3.35e-21 91.3
MsaG000853 AT1G25340.3 41.176 102 56 1 96 197 20 117 3.57e-21 91.7
MsaG000853 AT2G02820.3 37.374 99 62 0 99 197 33 131 3.72e-21 92.0
MsaG000853 AT3G01530.1 33.813 139 91 1 96 233 27 165 3.86e-21 89.7
MsaG000853 AT4G01680.2 39.007 141 70 4 94 221 12 149 4.61e-21 92.0
MsaG000853 AT3G28470.1 43.299 97 54 1 96 191 14 110 5.24e-21 91.7
MsaG000853 AT2G02820.1 37.374 99 62 0 99 197 33 131 6.30e-21 92.8
MsaG000853 AT2G02820.2 37.374 99 62 0 99 197 33 131 7.13e-21 92.8
MsaG000853 AT5G40350.1 41.748 103 59 1 96 197 19 121 7.26e-21 89.0
MsaG000853 AT4G25560.1 45.098 102 55 1 96 196 12 113 8.22e-21 90.5
MsaG000853 AT5G35550.1 39.091 110 66 1 89 197 9 118 8.38e-21 89.7
MsaG000853 AT1G08810.1 40.870 115 67 1 96 209 14 128 1.20e-20 89.7
MsaG000853 AT5G52600.1 41.176 102 59 1 96 196 14 115 2.13e-20 87.4
MsaG000853 AT5G61420.2 34.615 156 92 4 94 241 12 165 2.88e-20 90.1
MsaG000853 AT5G49330.1 40.000 115 60 2 94 203 12 122 3.31e-20 89.7
MsaG000853 AT3G27810.1 40.777 103 60 1 96 197 22 124 3.56e-20 87.4
MsaG000853 AT1G74650.1 43.689 103 57 1 96 197 14 116 3.88e-20 89.4
MsaG000853 AT5G62470.2 42.056 107 53 2 96 197 14 116 4.22e-20 89.4
MsaG000853 AT3G62610.1 42.718 103 58 1 96 197 14 116 4.45e-20 89.4
MsaG000853 AT5G07700.1 40.952 105 61 1 94 197 12 116 4.51e-20 89.4
MsaG000853 AT5G07700.2 40.952 105 61 1 94 197 12 116 4.51e-20 89.4
MsaG000853 AT1G48000.1 35.185 108 69 1 93 199 31 138 4.67e-20 87.4
MsaG000853 AT3G47600.1 40.171 117 60 3 96 206 14 126 5.51e-20 89.0
MsaG000853 AT5G07690.1 42.718 103 58 1 94 195 12 114 6.30e-20 89.0
MsaG000853 AT5G57620.1 35.882 170 100 6 96 261 14 178 1.05e-19 88.2
MsaG000853 AT5G62320.1 41.593 113 56 3 94 197 13 124 1.08e-19 86.7
MsaG000853 AT2G47460.1 35.556 135 84 2 96 229 14 146 1.93e-19 87.8
MsaG000853 AT3G28910.1 41.346 104 60 1 96 198 14 117 3.21e-19 86.7
MsaG000853 AT3G60460.1 42.157 102 57 2 96 195 13 114 4.17e-19 85.9
MsaG000853 AT1G79180.2 35.714 140 48 2 96 197 16 151 5.13e-19 86.3
MsaG000853 AT3G06490.1 37.391 115 66 2 93 201 18 132 8.69e-19 85.5
MsaG000853 AT5G52260.1 43.689 103 55 2 96 196 14 115 2.35e-18 83.2
MsaG000853 AT2G26950.1 40.000 100 57 2 94 191 16 114 3.12e-18 84.3
MsaG000853 AT5G14750.3 39.252 107 56 3 126 224 13 118 3.56e-18 80.5
MsaG000853 AT3G49690.1 41.346 104 59 2 96 197 14 117 3.91e-18 83.6
MsaG000853 AT2G36890.1 40.385 104 60 2 96 197 14 117 4.64e-18 83.2
MsaG000853 AT2G36890.2 40.385 104 60 2 96 197 55 158 5.86e-18 83.2
MsaG000853 AT5G65790.1 40.385 104 60 2 96 197 14 117 6.08e-18 83.6
MsaG000853 AT3G12820.2 52.174 69 33 0 129 197 2 70 9.79e-18 80.1
MsaG000853 AT5G23000.1 40.385 104 60 2 96 197 14 117 1.42e-17 82.0
MsaG000853 AT4G37780.1 42.593 108 52 3 96 197 14 117 1.49e-17 81.6
MsaG000853 AT5G49620.1 36.522 115 67 2 93 201 25 139 1.51e-17 81.6
MsaG000853 AT5G26660.2 50.725 69 34 0 129 197 17 85 3.16e-17 80.9
MsaG000853 AT1G66370.1 38.679 106 64 1 94 198 8 113 5.38e-17 79.3
MsaG000853 AT1G56650.1 32.370 173 109 5 94 260 8 178 9.89e-17 78.6
MsaG000853 AT3G53200.2 47.059 68 36 0 129 196 12 79 2.25e-16 76.6
MsaG000853 AT5G35550.2 47.826 69 36 0 129 197 53 121 4.33e-16 77.0
MsaG000853 AT5G40350.2 44.928 69 38 0 129 197 8 76 3.02e-15 72.8
MsaG000853 AT1G66380.1 40.385 104 61 1 94 196 8 111 3.65e-15 71.6
MsaG000853 AT3G47600.2 44.304 79 43 1 129 206 42 120 8.13e-15 73.9
MsaG000853 AT5G49620.2 33.333 129 66 3 93 201 25 153 8.86e-15 73.9
MsaG000853 AT3G27810.2 43.478 69 39 0 129 197 7 75 1.20e-14 71.2
MsaG000853 AT5G59780.2 43.478 69 39 0 129 197 23 91 3.62e-14 70.5
MsaG000853 AT3G46130.3 43.478 69 39 0 129 197 13 81 5.32e-14 70.5
MsaG000853 AT3G46130.4 43.478 69 39 0 129 197 23 91 6.87e-14 70.1
MsaG000853 AT1G66390.1 40.385 104 61 1 94 196 8 111 1.65e-13 69.3
MsaG000853 AT3G23250.2 44.737 76 32 1 140 215 2 67 9.82e-13 67.0
MsaG000853 AT5G14750.4 43.333 60 34 0 140 199 2 61 2.66e-12 63.9
MsaG000853 AT5G14750.2 43.333 60 34 0 140 199 2 61 2.66e-12 63.9
MsaG000853 AT1G22640.3 44.615 65 35 1 140 204 2 65 5.28e-12 64.3
MsaG000853 AT1G14350.3 40.984 61 36 0 137 197 23 83 9.36e-12 65.5
MsaG000853 AT1G14350.4 40.984 61 36 0 137 197 23 83 9.36e-12 65.5
MsaG000853 AT1G71030.1 37.879 66 41 0 132 197 19 84 2.05e-11 62.4
MsaG000853 AT1G71030.2 37.879 66 41 0 132 197 5 70 2.11e-11 62.0
MsaG000853 AT1G09770.1 39.326 89 52 2 94 181 4 91 3.10e-11 64.3

Find 63 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCGAGCTTGTTAAGATAAA+TGG 0.141546 1:-11576546 MsaT000853.1:CDS
CTTGCAGCTGCTTGTGTTAC+TGG 0.142973 1:-11576773 MsaT000853.1:intron
TTTGATTCTAATTGCGTCTT+AGG 0.190116 1:+11574599 None:intergenic
CAAGAAAGCAATTCCGTTCT+TGG 0.201902 1:-11578351 MsaT000853.1:CDS
ATCAAGACTCACAAAATATA+TGG 0.210499 1:-11576279 MsaT000853.1:CDS
TGCATGGATGTTAGTGTTCT+TGG 0.215594 1:+11574765 None:intergenic
CCTTTAGTTGATCTTCTTGT+AGG 0.220569 1:+11577442 None:intergenic
ATACCTTCCATGCAGAAATT+TGG 0.243914 1:+11576236 None:intergenic
TCTTTATATCTGGATTTAAA+TGG 0.268979 1:+11576337 None:intergenic
TAGAGTCGACTCCTCTTCTT+TGG 0.300498 1:+11576302 None:intergenic
GTATCAATGCTTGTTTCAAC+TGG 0.312381 1:+11574844 None:intergenic
AAGCACTTAATATATCTCTT+AGG 0.330862 1:+11574662 None:intergenic
ACAAAATATATGGGAATAGT+TGG 0.337373 1:-11576269 MsaT000853.1:CDS
TAATTGCGTCTTAGGATAGA+TGG 0.344686 1:+11574607 None:intergenic
GAATTGCTCTTTGAAGAAAA+AGG 0.365014 1:-11574920 MsaT000853.1:CDS
AGCTGTATCATAATCAGTTC+TGG 0.375606 1:+11574870 None:intergenic
CTTGCATTGTCTATGCTTTG+AGG 0.391340 1:+11574808 None:intergenic
GTTTCTTCTGTAGAATTTGA+TGG 0.395878 1:+11574706 None:intergenic
GCATGGATGTTAGTGTTCTT+GGG 0.426629 1:+11574766 None:intergenic
ATGTTCAATGTCTGCATCGC+TGG 0.431569 1:-11576742 MsaT000853.1:CDS
GCGAGCTTGTTAAGATAAAT+GGG 0.446526 1:-11576545 MsaT000853.1:CDS
AACATGACAAAGATTTGAAT+CGG 0.447727 1:-11578392 MsaT000853.1:CDS
CAAAGGACCTTGGTCAGAAC+AGG 0.449291 1:-11576693 MsaT000853.1:intron
ATTTGATGGGTTATTACAAA+GGG 0.451203 1:+11574720 None:intergenic
GACTCCTCTTCTTTGGTCCA+TGG 0.454598 1:+11576309 None:intergenic
CAAGGTCCTTTGATAAGATC+AGG 0.456953 1:+11576704 None:intergenic
CACTAACCGTTGTTGAATAG+AGG 0.469040 1:+11578314 None:intergenic
TTTACCTATGCGACCTGGTA+AGG 0.469131 1:+11576494 None:intergenic
TCAAGACTCACAAAATATAT+GGG 0.469743 1:-11576278 MsaT000853.1:CDS
CAAAATATATGGGAATAGTT+GGG 0.478966 1:-11576268 MsaT000853.1:CDS
ATGTCTGCATCGCTGGCAAA+AGG 0.482193 1:-11576735 MsaT000853.1:CDS
TTTCTTCTGTAGAATTTGAT+GGG 0.498863 1:+11574707 None:intergenic
AAAACTCTATCAAGAACCAT+TGG 0.516944 1:-11574942 MsaT000853.1:CDS
TAGGTAAACAATGTAGAGAA+AGG 0.521859 1:-11576479 MsaT000853.1:intron
CAGGTAGCAAAGTCCTTACC+AGG 0.531555 1:-11576507 MsaT000853.1:CDS
TATCAATGCTTGTTTCAACT+GGG 0.537247 1:+11574845 None:intergenic
TAGCCAAATTTCTGCATGGA+AGG 0.541115 1:-11576239 MsaT000853.1:intron
AATTTGATGGGTTATTACAA+AGG 0.542044 1:+11574719 None:intergenic
GAAGATCAACTAAAGGAGGC+TGG 0.544707 1:-11577435 MsaT000853.1:CDS
GTGCTTTAAAGACTTCTGCT+AGG 0.545613 1:-11574645 MsaT000853.1:CDS
ATTTGTACCTGTTCTGACCA+AGG 0.555478 1:+11576686 None:intergenic
CTGAATCCTGATCTTATCAA+AGG 0.558658 1:-11576710 MsaT000853.1:CDS
ACATGACAAAGATTTGAATC+GGG 0.560128 1:-11578391 MsaT000853.1:CDS
AACCGTTGTTGAATAGAGGC+AGG 0.565230 1:+11578318 None:intergenic
ATGACTAATAGAAGGGTGAC+TGG 0.565778 1:-11577466 MsaT000853.1:intron
CTGATCTTATCAAAGGACCT+TGG 0.567133 1:-11576703 MsaT000853.1:CDS
CCTACAAGAAGATCAACTAA+AGG 0.583785 1:-11577442 MsaT000853.1:CDS
CTTAATATATCTCTTAGGCT+AGG 0.583832 1:+11574667 None:intergenic
AGGAGGCTGGACAGAGAAGG+AGG 0.589108 1:-11577422 MsaT000853.1:intron
CATTGTTTACCTATGCGACC+TGG 0.593105 1:+11576489 None:intergenic
TCTTCAAAGAGCAATTCCAA+TGG 0.603151 1:+11574926 None:intergenic
CAGATATAAAGAAAACTCCA+TGG 0.607480 1:-11576326 MsaT000853.1:CDS
ACAAGAAGATCAACTAAAGG+AGG 0.608718 1:-11577439 MsaT000853.1:CDS
TAAAGGAGGCTGGACAGAGA+AGG 0.611791 1:-11577425 MsaT000853.1:CDS
AACTCCATGGACCAAAGAAG+AGG 0.612896 1:-11576313 MsaT000853.1:CDS
AAGTCCTTACCAGGTCGCAT+AGG 0.617150 1:-11576498 MsaT000853.1:CDS
GAAATAGCCAAATTTCTGCA+TGG 0.618995 1:-11576243 MsaT000853.1:CDS
ATCAATGCTTGTTTCAACTG+GGG 0.635613 1:+11574846 None:intergenic
AGGTCTTTGAGTTCCAAGAA+CGG 0.645576 1:+11578338 None:intergenic
TGTATCATAATCAGTTCTGG+AGG 0.660753 1:+11574873 None:intergenic
GGTTGATTTAAATACCTCAG+TGG 0.679208 1:-11574899 MsaT000853.1:CDS
GACCTGCCTCTATTCAACAA+CGG 0.701726 1:-11578320 MsaT000853.1:intron
AGTTCTGGAGGTGTCCACTG+AGG 0.730252 1:+11574885 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 11574606 11578418 11574606 ID=MsaG000853
Chr1 mRNA 11574606 11578418 11574606 ID=MsaT000853.1;Parent=MsaG000853
Chr1 exon 11574606 11574969 11574606 ID=MsaT000853.1.exon7;Parent=MsaT000853.1
Chr1 CDS 11574606 11574969 11574606 ID=cds.MsaT000853.1;Parent=MsaT000853.1
Chr1 exon 11576240 11576368 11576240 ID=MsaT000853.1.exon6;Parent=MsaT000853.1
Chr1 CDS 11576240 11576368 11576240 ID=cds.MsaT000853.1;Parent=MsaT000853.1
Chr1 exon 11576480 11576583 11576480 ID=MsaT000853.1.exon5;Parent=MsaT000853.1
Chr1 CDS 11576480 11576583 11576480 ID=cds.MsaT000853.1;Parent=MsaT000853.1
Chr1 exon 11576694 11576788 11576694 ID=MsaT000853.1.exon4;Parent=MsaT000853.1
Chr1 CDS 11576694 11576788 11576694 ID=cds.MsaT000853.1;Parent=MsaT000853.1
Chr1 exon 11577227 11577284 11577227 ID=MsaT000853.1.exon3;Parent=MsaT000853.1
Chr1 CDS 11577227 11577284 11577227 ID=cds.MsaT000853.1;Parent=MsaT000853.1
Chr1 exon 11577423 11577477 11577423 ID=MsaT000853.1.exon2;Parent=MsaT000853.1
Chr1 CDS 11577423 11577477 11577423 ID=cds.MsaT000853.1;Parent=MsaT000853.1
Chr1 exon 11578321 11578418 11578321 ID=MsaT000853.1.exon1;Parent=MsaT000853.1
Chr1 CDS 11578321 11578418 11578321 ID=cds.MsaT000853.1;Parent=MsaT000853.1
Gene Sequence

>MsaT000853.1

ATGGAACATGACAAAGATTTGAATCGGGCATCAAGTTCTTCAGAACAAGAAAGCAATTCCGTTCTTGGAACTCAAAGACCTGCCTCTATTCAACAACGAAGGGTGACTGGTCCTACAAGAAGATCAACTAAAGGAGGCTGGACAGAGAAGGAGGATAAACTTTTGATTGCTGCTGTGAAAAAGTATAATGGAAAAAGTTGGAAAAAGATAGCTGCTTGTGTTACTGGCAGAACAGATGTTCAATGTCTGCATCGCTGGCAAAAGGTTCTGAATCCTGATCTTATCAAAGGACCTTGGTCAGAACAGGAAGATAATCAACTAAGCGAGCTTGTTAAGATAAATGGGAAAAAAAATTGGTCTCAGGTAGCAAAGTCCTTACCAGGTCGCATAGGTAAACAATGTAGAGAAAGGTGGTATAACCATTTAAATCCAGATATAAAGAAAACTCCATGGACCAAAGAAGAGGAGTCGACTCTAATCAAGACTCACAAAATATATGGGAATAGTTGGGCTGAAATAGCCAAATTTCTGCATGGAAGGAGTGAAAACTCTATCAAGAACCATTGGAATTGCTCTTTGAAGAAAAAGGTTGATTTAAATACCTCAGTGGACACCTCCAGAACTGATTATGATACAGCTACCCCAGTTGAAACAAGCATTGATACAAATGTTGAAACTCCTCAAAGCATAGACAATGCAAGTCATGACTTTTTGGCAACACCCAAGAACACTAACATCCATGCACAAAATACTTCAATTTTTAATTCCCTTTGTAATAACCCATCAAATTCTACAGAAGAAACACTTGATACTAGTAGTCCTAGCCTAAGAGATATATTAAGTGCTTTAAAGACTTCTGCTAGGAAATGTAAATACATTCCATCTATCCTAAGACGCAATTAG
Protein sequence

>MsaT000853.1

MEHDKDLNRASSSSEQESNSVLGTQRPASIQQRRVTGPTRRSTKGGWTEKEDKLLIAAVKKYNGKSWKKIAACVTGRTDVQCLHRWQKVLNPDLIKGPWSEQEDNQLSELVKINGKKNWSQVAKSLPGRIGKQCRERWYNHLNPDIKKTPWTKEEESTLIKTHKIYGNSWAEIAKFLHGRSENSIKNHWNCSLKKKVDLNTSVDTSRTDYDTATPVETSIDTNVETPQSIDNASHDFLATPKNTNIHAQNTSIFNSLCNNPSNSTEETLDTSSPSLRDILSALKTSARKCKYIPSILRRN*