Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG000859 | QDC33486.1 | 99.721 | 359 | 1 | 0 | 253 | 611 | 3 | 361 | 0.0 | 753 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG000859 | sp|Q67XG0|GLB3_ARATH | 79.054 | 148 | 30 | 1 | 98 | 245 | 1 | 147 | 6.84e-78 | 247 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG000859 | tr|A0A4Y5ULN1|A0A4Y5ULN1_MEDSA | 99.721 | 359 | 1 | 0 | 253 | 611 | 3 | 361 | 0.0 | 753 |
Gene ID | Type | Classification |
---|---|---|
MsaG000859 | TF | NAC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG000859 | MtrunA17_Chr1g0147421 | 97.500 | 360 | 7 | 2 | 253 | 611 | 3 | 361 | 0.0 | 729 |
MsaG000859 | MtrunA17_Chr3g0139331 | 59.780 | 363 | 111 | 14 | 267 | 611 | 1 | 346 | 3.37e-115 | 347 |
MsaG000859 | MtrunA17_Chr1g0147401 | 94.595 | 148 | 8 | 0 | 98 | 245 | 1 | 148 | 2.08e-99 | 300 |
MsaG000859 | MtrunA17_Chr6g0484441 | 75.625 | 160 | 35 | 3 | 274 | 433 | 2 | 157 | 2.71e-78 | 251 |
MsaG000859 | MtrunA17_Chr3g0139391 | 77.703 | 148 | 32 | 1 | 98 | 245 | 1 | 147 | 3.44e-78 | 245 |
MsaG000859 | MtrunA17_Chr2g0316971 | 72.903 | 155 | 38 | 2 | 277 | 428 | 23 | 176 | 1.58e-76 | 248 |
MsaG000859 | MtrunA17_Chr4g0060931 | 65.882 | 170 | 52 | 3 | 267 | 433 | 7 | 173 | 3.19e-73 | 239 |
MsaG000859 | MtrunA17_Chr3g0091921 | 65.476 | 168 | 51 | 4 | 270 | 433 | 8 | 172 | 1.51e-71 | 233 |
MsaG000859 | MtrunA17_Chr6g0461661 | 62.941 | 170 | 59 | 2 | 277 | 443 | 18 | 186 | 6.21e-70 | 231 |
MsaG000859 | MtrunA17_Chr7g0253011 | 64.535 | 172 | 54 | 4 | 277 | 443 | 17 | 186 | 2.72e-69 | 229 |
MsaG000859 | MtrunA17_Chr6g0453451 | 61.326 | 181 | 60 | 5 | 256 | 433 | 3 | 176 | 8.93e-69 | 226 |
MsaG000859 | MtrunA17_Chr3g0144271 | 56.831 | 183 | 75 | 1 | 271 | 449 | 17 | 199 | 2.33e-65 | 220 |
MsaG000859 | MtrunA17_Chr7g0217721 | 59.412 | 170 | 50 | 3 | 280 | 433 | 22 | 188 | 4.36e-61 | 206 |
MsaG000859 | MtrunA17_Chr1g0147391 | 98.913 | 92 | 1 | 0 | 1 | 92 | 1 | 92 | 3.53e-59 | 193 |
MsaG000859 | MtrunA17_Chr2g0312321 | 57.485 | 167 | 62 | 4 | 274 | 437 | 8 | 168 | 2.12e-57 | 195 |
MsaG000859 | MtrunA17_Chr1g0183741 | 52.830 | 159 | 71 | 2 | 269 | 427 | 2 | 156 | 1.37e-55 | 189 |
MsaG000859 | MtrunA17_Chr7g0217711 | 65.185 | 135 | 44 | 2 | 280 | 414 | 22 | 153 | 1.08e-54 | 184 |
MsaG000859 | MtrunA17_Chr2g0309331 | 47.826 | 207 | 95 | 7 | 274 | 475 | 7 | 205 | 1.74e-54 | 189 |
MsaG000859 | MtrunA17_Chr7g0261411 | 52.866 | 157 | 70 | 2 | 269 | 425 | 2 | 154 | 5.23e-54 | 186 |
MsaG000859 | MtrunA17_Chr4g0017921 | 59.740 | 154 | 54 | 4 | 277 | 427 | 8 | 156 | 8.67e-54 | 187 |
MsaG000859 | MtrunA17_Chr2g0318101 | 50.575 | 174 | 67 | 3 | 270 | 428 | 8 | 177 | 1.41e-52 | 184 |
MsaG000859 | MtrunA17_Chr4g0018391 | 56.494 | 154 | 60 | 4 | 277 | 427 | 7 | 156 | 1.54e-52 | 183 |
MsaG000859 | MtrunA17_Chr5g0417791 | 49.724 | 181 | 73 | 5 | 277 | 444 | 3 | 178 | 3.27e-52 | 180 |
MsaG000859 | MtrunA17_Chr7g0252971 | 48.663 | 187 | 77 | 4 | 274 | 445 | 5 | 187 | 3.97e-52 | 182 |
MsaG000859 | MtrunA17_Chr3g0124761 | 52.907 | 172 | 67 | 4 | 274 | 438 | 4 | 168 | 4.68e-52 | 180 |
MsaG000859 | MtrunA17_Chr4g0056541 | 56.494 | 154 | 60 | 4 | 277 | 427 | 7 | 156 | 5.68e-52 | 182 |
MsaG000859 | MtrunA17_Chr7g0263931 | 51.807 | 166 | 74 | 2 | 267 | 427 | 1 | 165 | 6.59e-52 | 181 |
MsaG000859 | MtrunA17_Chr5g0398971 | 54.545 | 154 | 65 | 3 | 277 | 427 | 7 | 158 | 7.26e-52 | 182 |
MsaG000859 | MtrunA17_Chr8g0359921 | 52.381 | 168 | 73 | 4 | 276 | 439 | 13 | 177 | 2.32e-51 | 180 |
MsaG000859 | MtrunA17_Chr6g0481091 | 55.769 | 156 | 63 | 4 | 277 | 429 | 6 | 158 | 3.50e-51 | 176 |
MsaG000859 | MtrunA17_Chr2g0318081 | 54.037 | 161 | 66 | 4 | 276 | 433 | 15 | 170 | 3.84e-51 | 180 |
MsaG000859 | MtrunA17_Chr2g0309891 | 57.595 | 158 | 58 | 6 | 276 | 428 | 5 | 158 | 4.82e-51 | 179 |
MsaG000859 | MtrunA17_Chr5g0405211 | 52.229 | 157 | 68 | 4 | 274 | 427 | 5 | 157 | 1.21e-50 | 179 |
MsaG000859 | MtrunA17_Chr8g0346001 | 48.370 | 184 | 79 | 4 | 274 | 444 | 12 | 192 | 1.63e-50 | 181 |
MsaG000859 | MtrunA17_Chr4g0047841 | 46.701 | 197 | 66 | 5 | 277 | 446 | 15 | 199 | 2.27e-50 | 177 |
MsaG000859 | MtrunA17_Chr1g0200561 | 49.708 | 171 | 79 | 4 | 266 | 433 | 8 | 174 | 2.57e-50 | 177 |
MsaG000859 | MtrunA17_Chr3g0109821 | 56.051 | 157 | 62 | 4 | 276 | 428 | 5 | 158 | 4.48e-50 | 184 |
MsaG000859 | MtrunA17_Chr5g0433781 | 56.410 | 156 | 62 | 4 | 276 | 428 | 5 | 157 | 7.04e-50 | 183 |
MsaG000859 | MtrunA17_Chr8g0384721 | 50.289 | 173 | 73 | 5 | 267 | 434 | 1 | 165 | 2.18e-49 | 173 |
MsaG000859 | MtrunA17_Chr2g0326361 | 47.179 | 195 | 82 | 4 | 276 | 453 | 13 | 203 | 2.78e-49 | 174 |
MsaG000859 | MtrunA17_Chr8g0372121 | 48.765 | 162 | 76 | 4 | 274 | 432 | 3 | 160 | 2.93e-49 | 174 |
MsaG000859 | MtrunA17_Chr4g0042561 | 50.289 | 173 | 72 | 5 | 267 | 432 | 1 | 166 | 4.29e-49 | 172 |
MsaG000859 | MtrunA17_Chr7g0214071 | 49.730 | 185 | 72 | 6 | 274 | 445 | 12 | 188 | 7.99e-49 | 171 |
MsaG000859 | MtrunA17_Chr3g0092671 | 52.866 | 157 | 70 | 2 | 279 | 433 | 7 | 161 | 1.49e-47 | 175 |
MsaG000859 | MtrunA17_Chr3g0130731 | 48.235 | 170 | 80 | 4 | 274 | 439 | 4 | 169 | 7.98e-47 | 166 |
MsaG000859 | MtrunA17_Chr1g0197361 | 50.318 | 157 | 74 | 2 | 279 | 433 | 10 | 164 | 3.66e-46 | 172 |
MsaG000859 | MtrunA17_Chr8g0361731 | 45.665 | 173 | 83 | 3 | 266 | 428 | 3 | 174 | 2.37e-44 | 162 |
MsaG000859 | MtrunA17_Chr5g0400461 | 47.159 | 176 | 83 | 5 | 276 | 444 | 5 | 177 | 2.57e-44 | 161 |
MsaG000859 | MtrunA17_Chr4g0054791 | 44.974 | 189 | 84 | 6 | 267 | 446 | 1 | 178 | 1.21e-42 | 155 |
MsaG000859 | MtrunA17_Chr3g0128151 | 53.846 | 156 | 66 | 4 | 276 | 428 | 21 | 173 | 1.35e-42 | 162 |
MsaG000859 | MtrunA17_Chr5g0417001 | 45.122 | 164 | 80 | 2 | 274 | 428 | 11 | 173 | 1.92e-42 | 157 |
MsaG000859 | MtrunA17_Chr6g0453131 | 43.017 | 179 | 86 | 4 | 260 | 428 | 2 | 174 | 1.48e-41 | 155 |
MsaG000859 | MtrunA17_Chr5g0428991 | 52.597 | 154 | 67 | 4 | 277 | 427 | 25 | 175 | 2.74e-41 | 158 |
MsaG000859 | MtrunA17_Chr3g0113001 | 66.667 | 111 | 31 | 2 | 327 | 433 | 14 | 122 | 4.75e-41 | 150 |
MsaG000859 | MtrunA17_Chr4g0076731 | 45.732 | 164 | 85 | 4 | 273 | 436 | 50 | 209 | 2.61e-40 | 152 |
MsaG000859 | MtrunA17_Chr1g0197351 | 50.000 | 162 | 69 | 4 | 276 | 428 | 41 | 199 | 5.77e-40 | 152 |
MsaG000859 | MtrunA17_Chr5g0442771 | 40.571 | 175 | 92 | 3 | 271 | 434 | 12 | 185 | 6.51e-40 | 148 |
MsaG000859 | MtrunA17_Chr3g0130101 | 48.701 | 154 | 73 | 4 | 279 | 429 | 9 | 159 | 9.52e-40 | 149 |
MsaG000859 | MtrunA17_Chr3g0128111 | 50.000 | 152 | 70 | 4 | 280 | 428 | 45 | 193 | 3.12e-39 | 144 |
MsaG000859 | MtrunA17_Chr1g0201021 | 50.000 | 160 | 70 | 6 | 279 | 433 | 21 | 175 | 1.01e-38 | 150 |
MsaG000859 | MtrunA17_Chr4g0038751 | 43.125 | 160 | 85 | 3 | 274 | 432 | 12 | 166 | 2.34e-37 | 140 |
MsaG000859 | MtrunA17_Chr2g0311651 | 39.683 | 189 | 97 | 5 | 261 | 433 | 5 | 192 | 3.27e-37 | 140 |
MsaG000859 | MtrunA17_Chr8g0385991 | 38.710 | 186 | 97 | 4 | 277 | 452 | 14 | 192 | 4.34e-37 | 137 |
MsaG000859 | MtrunA17_Chr2g0311661 | 38.830 | 188 | 99 | 4 | 261 | 433 | 5 | 191 | 1.16e-36 | 138 |
MsaG000859 | MtrunA17_Chr8g0364791 | 45.455 | 154 | 78 | 4 | 277 | 427 | 6 | 156 | 3.56e-36 | 140 |
MsaG000859 | MtrunA17_Chr3g0131911 | 38.605 | 215 | 109 | 8 | 277 | 481 | 14 | 215 | 1.17e-34 | 131 |
MsaG000859 | MtrunA17_Chr8g0384201 | 43.506 | 154 | 81 | 4 | 277 | 427 | 6 | 156 | 3.93e-34 | 135 |
MsaG000859 | MtrunA17_Chr8g0345671 | 44.667 | 150 | 76 | 3 | 277 | 424 | 11 | 155 | 1.91e-32 | 129 |
MsaG000859 | MtrunA17_Chr4g0026141 | 39.412 | 170 | 93 | 3 | 274 | 439 | 2 | 165 | 2.38e-32 | 125 |
MsaG000859 | MtrunA17_Chr8g0345711 | 42.759 | 145 | 78 | 3 | 275 | 417 | 10 | 151 | 2.43e-31 | 120 |
MsaG000859 | MtrunA17_Chr3g0113031 | 52.800 | 125 | 51 | 3 | 339 | 457 | 1 | 123 | 3.72e-31 | 122 |
MsaG000859 | MtrunA17_Chr8g0345691 | 45.736 | 129 | 67 | 2 | 277 | 403 | 12 | 139 | 5.46e-30 | 122 |
MsaG000859 | MtrunA17_Chr4g0050701 | 39.752 | 161 | 77 | 4 | 277 | 428 | 11 | 160 | 7.94e-30 | 116 |
MsaG000859 | MtrunA17_Chr2g0321631 | 42.143 | 140 | 69 | 4 | 278 | 409 | 5 | 140 | 1.21e-29 | 117 |
MsaG000859 | MtrunA17_Chr2g0321741 | 41.096 | 146 | 75 | 4 | 306 | 450 | 20 | 155 | 2.45e-29 | 119 |
MsaG000859 | MtrunA17_Chr7g0266701 | 36.257 | 171 | 97 | 5 | 275 | 434 | 2 | 171 | 3.03e-29 | 116 |
MsaG000859 | MtrunA17_Chr8g0345701 | 43.243 | 148 | 65 | 4 | 272 | 403 | 2 | 146 | 1.39e-28 | 112 |
MsaG000859 | MtrunA17_Chr8g0345731 | 39.474 | 152 | 86 | 4 | 277 | 424 | 24 | 173 | 6.96e-28 | 110 |
MsaG000859 | MtrunA17_Chr8g0345721 | 35.079 | 191 | 83 | 4 | 253 | 403 | 2 | 191 | 5.14e-27 | 108 |
MsaG000859 | MtrunA17_Chr7g0243371 | 55.696 | 79 | 35 | 0 | 332 | 410 | 18 | 96 | 1.35e-24 | 99.0 |
MsaG000859 | MtrunA17_Chr8g0345741 | 40.678 | 118 | 67 | 2 | 288 | 403 | 2 | 118 | 1.00e-23 | 97.8 |
MsaG000859 | MtrunA17_Chr8g0384351 | 41.060 | 151 | 67 | 5 | 277 | 427 | 10 | 138 | 2.48e-22 | 94.7 |
MsaG000859 | MtrunA17_Chr3g0130321 | 35.912 | 181 | 92 | 7 | 277 | 444 | 7 | 176 | 2.39e-21 | 92.8 |
MsaG000859 | MtrunA17_Chr3g0139401 | 57.692 | 104 | 28 | 5 | 1 | 92 | 1 | 100 | 4.50e-19 | 83.2 |
MsaG000859 | MtrunA17_Chr7g0251661 | 35.821 | 134 | 79 | 5 | 274 | 405 | 7 | 135 | 1.25e-17 | 80.5 |
MsaG000859 | MtrunA17_Chr7g0251651 | 34.351 | 131 | 79 | 5 | 277 | 405 | 18 | 143 | 8.52e-17 | 79.3 |
MsaG000859 | MtrunA17_Chr3g0113011 | 60.000 | 50 | 19 | 1 | 277 | 326 | 19 | 67 | 2.13e-15 | 71.2 |
MsaG000859 | MtrunA17_Chr3g0113041 | 63.043 | 46 | 16 | 1 | 281 | 326 | 23 | 67 | 1.32e-14 | 68.9 |
MsaG000859 | MtrunA17_Chr4g0046431 | 29.808 | 208 | 123 | 9 | 277 | 469 | 68 | 267 | 2.24e-14 | 74.7 |
MsaG000859 | MtrunA17_Chr7g0251671 | 31.343 | 134 | 85 | 4 | 274 | 405 | 7 | 135 | 3.27e-14 | 70.9 |
MsaG000859 | MtrunA17_Chr2g0324961 | 34.118 | 170 | 85 | 8 | 277 | 428 | 49 | 209 | 1.52e-13 | 71.6 |
MsaG000859 | MtrunA17_Chr8g0389661 | 30.994 | 171 | 90 | 6 | 277 | 425 | 47 | 211 | 4.10e-12 | 68.9 |
MsaG000859 | MtrunA17_Chr1g0198751 | 28.708 | 209 | 118 | 9 | 277 | 467 | 58 | 253 | 6.47e-11 | 65.1 |
MsaG000859 | MtrunA17_Chr7g0274971 | 30.000 | 180 | 112 | 8 | 283 | 455 | 11 | 183 | 7.42e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG000859 | AT2G24430.2 | 51.966 | 356 | 102 | 9 | 271 | 608 | 10 | 314 | 5.06e-101 | 310 |
MsaG000859 | AT2G24430.1 | 51.966 | 356 | 102 | 9 | 271 | 608 | 10 | 314 | 5.06e-101 | 310 |
MsaG000859 | AT3G18400.1 | 73.750 | 160 | 39 | 2 | 274 | 433 | 2 | 158 | 4.96e-79 | 253 |
MsaG000859 | AT4G32690.1 | 79.054 | 148 | 30 | 1 | 98 | 245 | 1 | 147 | 6.96e-79 | 247 |
MsaG000859 | AT5G53950.1 | 72.152 | 158 | 40 | 2 | 277 | 431 | 17 | 173 | 8.04e-76 | 246 |
MsaG000859 | AT5G61430.1 | 67.647 | 170 | 49 | 3 | 272 | 438 | 11 | 177 | 2.07e-73 | 239 |
MsaG000859 | AT3G15170.1 | 69.565 | 161 | 45 | 2 | 272 | 429 | 15 | 174 | 9.06e-73 | 236 |
MsaG000859 | AT5G07680.2 | 68.485 | 165 | 46 | 3 | 277 | 438 | 3 | 164 | 1.01e-72 | 236 |
MsaG000859 | AT5G07680.1 | 64.641 | 181 | 54 | 4 | 265 | 438 | 1 | 178 | 1.39e-72 | 236 |
MsaG000859 | AT1G76420.1 | 64.671 | 167 | 58 | 1 | 266 | 432 | 11 | 176 | 1.13e-70 | 231 |
MsaG000859 | AT5G39610.1 | 63.043 | 184 | 54 | 5 | 272 | 452 | 15 | 187 | 1.42e-69 | 227 |
MsaG000859 | AT5G18270.2 | 69.032 | 155 | 43 | 3 | 277 | 428 | 21 | 173 | 2.05e-67 | 223 |
MsaG000859 | AT5G18270.1 | 68.387 | 155 | 44 | 3 | 277 | 428 | 21 | 173 | 7.25e-67 | 221 |
MsaG000859 | AT3G29035.1 | 61.202 | 183 | 64 | 4 | 258 | 436 | 5 | 184 | 6.16e-66 | 219 |
MsaG000859 | AT3G04060.1 | 60.773 | 181 | 61 | 4 | 268 | 445 | 11 | 184 | 6.99e-65 | 216 |
MsaG000859 | AT3G12977.1 | 48.058 | 206 | 85 | 6 | 274 | 464 | 15 | 213 | 1.11e-55 | 190 |
MsaG000859 | AT4G27410.2 | 53.216 | 171 | 70 | 5 | 269 | 433 | 2 | 168 | 1.18e-55 | 191 |
MsaG000859 | AT4G10350.1 | 59.355 | 155 | 56 | 4 | 277 | 427 | 9 | 160 | 3.96e-54 | 188 |
MsaG000859 | AT1G56010.2 | 39.146 | 281 | 148 | 8 | 274 | 541 | 16 | 286 | 6.42e-54 | 187 |
MsaG000859 | AT1G33280.1 | 59.740 | 154 | 54 | 4 | 277 | 427 | 8 | 156 | 1.10e-53 | 186 |
MsaG000859 | AT4G27410.3 | 48.936 | 188 | 69 | 6 | 269 | 433 | 2 | 185 | 2.85e-52 | 182 |
MsaG000859 | AT2G18060.3 | 35.185 | 324 | 181 | 9 | 276 | 581 | 8 | 320 | 4.22e-52 | 183 |
MsaG000859 | AT2G18060.1 | 35.185 | 324 | 181 | 9 | 276 | 581 | 8 | 320 | 4.22e-52 | 183 |
MsaG000859 | AT1G12260.2 | 54.430 | 158 | 65 | 4 | 277 | 431 | 7 | 160 | 4.24e-52 | 182 |
MsaG000859 | AT1G12260.1 | 54.430 | 158 | 65 | 4 | 277 | 431 | 7 | 160 | 6.22e-52 | 184 |
MsaG000859 | AT1G69490.1 | 53.659 | 164 | 68 | 4 | 274 | 432 | 6 | 166 | 1.25e-51 | 179 |
MsaG000859 | AT1G62700.1 | 55.063 | 158 | 64 | 4 | 277 | 431 | 7 | 160 | 1.49e-51 | 182 |
MsaG000859 | AT1G62700.2 | 55.063 | 158 | 64 | 4 | 277 | 431 | 7 | 160 | 1.49e-51 | 182 |
MsaG000859 | AT4G28530.1 | 48.851 | 174 | 71 | 2 | 269 | 427 | 2 | 172 | 1.79e-51 | 181 |
MsaG000859 | AT3G04070.2 | 50.838 | 179 | 72 | 5 | 270 | 435 | 3 | 178 | 1.87e-51 | 181 |
MsaG000859 | AT1G65910.1 | 55.280 | 161 | 66 | 4 | 276 | 433 | 5 | 162 | 2.05e-51 | 187 |
MsaG000859 | AT3G10500.1 | 56.522 | 161 | 64 | 4 | 276 | 433 | 8 | 165 | 2.55e-51 | 186 |
MsaG000859 | AT1G61110.1 | 51.479 | 169 | 67 | 4 | 277 | 432 | 16 | 182 | 6.22e-51 | 179 |
MsaG000859 | AT1G52890.1 | 53.459 | 159 | 70 | 3 | 276 | 433 | 13 | 168 | 6.64e-51 | 179 |
MsaG000859 | AT1G01720.1 | 53.086 | 162 | 67 | 4 | 277 | 433 | 7 | 164 | 6.89e-51 | 177 |
MsaG000859 | AT1G71930.2 | 51.592 | 157 | 69 | 4 | 274 | 427 | 6 | 158 | 9.25e-51 | 178 |
MsaG000859 | AT1G71930.1 | 51.592 | 157 | 69 | 4 | 274 | 427 | 6 | 158 | 9.25e-51 | 178 |
MsaG000859 | AT4G36160.1 | 53.548 | 155 | 65 | 4 | 276 | 427 | 9 | 159 | 9.40e-51 | 180 |
MsaG000859 | AT4G36160.3 | 53.548 | 155 | 65 | 4 | 276 | 427 | 9 | 159 | 9.40e-51 | 180 |
MsaG000859 | AT4G36160.2 | 53.548 | 155 | 65 | 4 | 276 | 427 | 13 | 163 | 1.16e-50 | 180 |
MsaG000859 | AT3G15500.1 | 53.459 | 159 | 70 | 3 | 276 | 433 | 13 | 168 | 2.12e-50 | 177 |
MsaG000859 | AT5G62380.2 | 52.795 | 161 | 69 | 4 | 277 | 434 | 7 | 163 | 2.18e-50 | 178 |
MsaG000859 | AT5G62380.1 | 52.795 | 161 | 69 | 4 | 277 | 434 | 7 | 163 | 2.18e-50 | 178 |
MsaG000859 | AT3G03200.1 | 57.051 | 156 | 60 | 4 | 276 | 427 | 5 | 157 | 3.00e-50 | 181 |
MsaG000859 | AT3G17730.1 | 55.128 | 156 | 64 | 4 | 277 | 429 | 6 | 158 | 3.26e-50 | 174 |
MsaG000859 | AT3G61910.1 | 47.802 | 182 | 75 | 4 | 274 | 438 | 8 | 186 | 4.25e-50 | 177 |
MsaG000859 | AT2G46770.1 | 50.877 | 171 | 64 | 5 | 274 | 427 | 13 | 180 | 1.06e-49 | 177 |
MsaG000859 | AT5G04410.1 | 55.280 | 161 | 66 | 4 | 276 | 433 | 8 | 165 | 1.47e-49 | 181 |
MsaG000859 | AT5G08790.1 | 52.096 | 167 | 70 | 4 | 274 | 434 | 4 | 166 | 2.57e-49 | 173 |
MsaG000859 | AT3G04070.1 | 46.667 | 195 | 72 | 5 | 270 | 435 | 3 | 194 | 3.45e-49 | 175 |
MsaG000859 | AT5G66300.1 | 51.613 | 155 | 69 | 3 | 276 | 427 | 11 | 162 | 3.92e-49 | 173 |
MsaG000859 | AT1G79580.3 | 56.410 | 156 | 59 | 5 | 276 | 427 | 16 | 166 | 4.18e-49 | 175 |
MsaG000859 | AT1G79580.5 | 56.410 | 156 | 59 | 5 | 276 | 427 | 16 | 166 | 4.18e-49 | 175 |
MsaG000859 | AT1G79580.4 | 56.410 | 156 | 59 | 5 | 276 | 427 | 16 | 166 | 4.18e-49 | 175 |
MsaG000859 | AT1G79580.2 | 56.410 | 156 | 59 | 5 | 276 | 427 | 16 | 166 | 4.18e-49 | 175 |
MsaG000859 | AT1G79580.1 | 56.410 | 156 | 59 | 5 | 276 | 427 | 16 | 166 | 4.18e-49 | 175 |
MsaG000859 | AT5G17260.1 | 56.410 | 156 | 61 | 4 | 276 | 427 | 5 | 157 | 4.57e-49 | 178 |
MsaG000859 | AT5G63790.1 | 45.933 | 209 | 101 | 5 | 234 | 434 | 5 | 209 | 7.30e-49 | 173 |
MsaG000859 | AT5G63790.2 | 46.190 | 210 | 99 | 6 | 234 | 434 | 15 | 219 | 7.43e-49 | 173 |
MsaG000859 | AT3G10490.1 | 52.727 | 165 | 69 | 5 | 269 | 428 | 19 | 179 | 3.90e-47 | 166 |
MsaG000859 | AT1G77450.1 | 51.220 | 164 | 66 | 4 | 277 | 433 | 10 | 166 | 1.28e-46 | 165 |
MsaG000859 | AT3G10480.1 | 55.975 | 159 | 59 | 6 | 276 | 428 | 26 | 179 | 1.81e-46 | 170 |
MsaG000859 | AT1G32770.1 | 49.697 | 165 | 66 | 5 | 277 | 427 | 16 | 177 | 3.65e-46 | 167 |
MsaG000859 | AT5G61430.2 | 67.826 | 115 | 32 | 2 | 327 | 438 | 2 | 114 | 4.05e-46 | 164 |
MsaG000859 | AT3G15510.1 | 47.305 | 167 | 69 | 3 | 281 | 432 | 21 | 183 | 5.06e-46 | 167 |
MsaG000859 | AT3G10480.2 | 54.777 | 157 | 63 | 5 | 276 | 428 | 26 | 178 | 5.29e-46 | 169 |
MsaG000859 | AT3G10490.2 | 52.727 | 165 | 69 | 5 | 269 | 428 | 19 | 179 | 1.34e-45 | 168 |
MsaG000859 | AT5G46590.1 | 50.955 | 157 | 71 | 4 | 276 | 428 | 5 | 159 | 1.41e-45 | 163 |
MsaG000859 | AT4G17980.1 | 51.572 | 159 | 67 | 4 | 276 | 427 | 5 | 160 | 1.62e-45 | 162 |
MsaG000859 | AT5G13180.1 | 50.318 | 157 | 73 | 3 | 277 | 432 | 14 | 166 | 2.15e-45 | 161 |
MsaG000859 | AT5G46590.2 | 56.818 | 132 | 53 | 3 | 276 | 405 | 5 | 134 | 2.39e-45 | 162 |
MsaG000859 | AT4G17980.2 | 51.572 | 159 | 67 | 4 | 276 | 427 | 5 | 160 | 4.02e-45 | 162 |
MsaG000859 | AT1G54330.1 | 52.795 | 161 | 67 | 5 | 276 | 433 | 5 | 159 | 4.15e-45 | 162 |
MsaG000859 | AT1G33060.1 | 52.500 | 160 | 70 | 4 | 275 | 431 | 22 | 178 | 7.99e-45 | 169 |
MsaG000859 | AT1G33060.2 | 53.846 | 156 | 66 | 4 | 275 | 427 | 22 | 174 | 8.43e-45 | 169 |
MsaG000859 | AT4G35580.1 | 53.846 | 156 | 66 | 4 | 275 | 427 | 7 | 159 | 2.84e-44 | 165 |
MsaG000859 | AT4G35580.3 | 53.846 | 156 | 66 | 4 | 275 | 427 | 7 | 159 | 3.33e-44 | 166 |
MsaG000859 | AT4G35580.2 | 53.846 | 156 | 66 | 4 | 275 | 427 | 7 | 159 | 3.92e-44 | 166 |
MsaG000859 | AT1G52880.1 | 50.617 | 162 | 62 | 4 | 281 | 428 | 21 | 178 | 6.41e-43 | 157 |
MsaG000859 | AT1G26870.1 | 43.429 | 175 | 88 | 2 | 264 | 428 | 3 | 176 | 7.99e-43 | 159 |
MsaG000859 | AT1G34180.3 | 50.000 | 158 | 73 | 4 | 279 | 433 | 18 | 172 | 9.53e-43 | 160 |
MsaG000859 | AT5G39820.1 | 41.489 | 188 | 85 | 4 | 264 | 428 | 7 | 192 | 4.60e-42 | 155 |
MsaG000859 | AT2G02450.1 | 47.561 | 164 | 82 | 4 | 279 | 442 | 53 | 212 | 6.93e-42 | 155 |
MsaG000859 | AT1G34190.1 | 50.000 | 158 | 73 | 4 | 279 | 433 | 18 | 172 | 7.65e-42 | 159 |
MsaG000859 | AT1G34180.1 | 50.000 | 158 | 73 | 4 | 279 | 433 | 18 | 172 | 7.77e-42 | 159 |
MsaG000859 | AT2G02450.2 | 47.561 | 164 | 82 | 4 | 279 | 442 | 53 | 212 | 8.05e-42 | 156 |
MsaG000859 | AT2G33480.1 | 50.658 | 152 | 68 | 4 | 277 | 427 | 15 | 160 | 1.94e-41 | 151 |
MsaG000859 | AT1G34180.4 | 46.471 | 170 | 73 | 4 | 279 | 433 | 18 | 184 | 6.02e-41 | 155 |
MsaG000859 | AT3G10480.3 | 46.875 | 192 | 58 | 7 | 276 | 428 | 26 | 212 | 6.63e-41 | 156 |
MsaG000859 | AT5G24590.2 | 45.652 | 184 | 91 | 5 | 276 | 452 | 12 | 193 | 7.02e-41 | 154 |
MsaG000859 | AT3G49530.2 | 50.000 | 156 | 73 | 4 | 275 | 427 | 11 | 164 | 9.93e-41 | 153 |
MsaG000859 | AT2G43000.1 | 44.304 | 158 | 83 | 3 | 272 | 427 | 13 | 167 | 1.22e-40 | 149 |
MsaG000859 | AT2G33480.2 | 50.000 | 156 | 61 | 5 | 277 | 427 | 15 | 158 | 1.26e-40 | 149 |
MsaG000859 | AT3G49530.1 | 50.314 | 159 | 68 | 5 | 275 | 427 | 11 | 164 | 3.24e-40 | 153 |
MsaG000859 | AT5G64060.1 | 46.154 | 156 | 78 | 4 | 277 | 429 | 6 | 158 | 3.85e-40 | 150 |
MsaG000859 | AT1G34180.2 | 46.471 | 170 | 73 | 4 | 279 | 433 | 18 | 184 | 4.24e-40 | 155 |
MsaG000859 | AT5G09330.5 | 49.359 | 156 | 73 | 4 | 277 | 429 | 6 | 158 | 5.57e-40 | 153 |
MsaG000859 | AT5G09330.2 | 49.359 | 156 | 73 | 4 | 277 | 429 | 6 | 158 | 5.57e-40 | 153 |
MsaG000859 | AT5G09330.4 | 49.359 | 156 | 73 | 4 | 277 | 429 | 6 | 158 | 5.57e-40 | 153 |
MsaG000859 | AT5G09330.3 | 49.359 | 156 | 73 | 4 | 277 | 429 | 6 | 158 | 5.57e-40 | 153 |
MsaG000859 | AT5G09330.1 | 49.359 | 156 | 73 | 4 | 277 | 429 | 6 | 158 | 5.57e-40 | 153 |
MsaG000859 | AT1G32870.3 | 48.370 | 184 | 78 | 7 | 257 | 433 | 29 | 202 | 2.83e-39 | 152 |
MsaG000859 | AT2G27300.1 | 49.032 | 155 | 68 | 5 | 276 | 429 | 13 | 157 | 3.76e-39 | 147 |
MsaG000859 | AT1G32870.2 | 51.235 | 162 | 69 | 5 | 277 | 433 | 10 | 166 | 7.37e-39 | 150 |
MsaG000859 | AT1G32870.1 | 51.235 | 162 | 69 | 5 | 277 | 433 | 10 | 166 | 7.62e-39 | 150 |
MsaG000859 | AT1G32510.1 | 45.783 | 166 | 80 | 4 | 277 | 433 | 6 | 170 | 1.35e-38 | 144 |
MsaG000859 | AT2G17040.1 | 43.226 | 155 | 82 | 3 | 279 | 432 | 8 | 157 | 3.37e-38 | 142 |
MsaG000859 | AT5G22290.1 | 44.848 | 165 | 78 | 5 | 276 | 439 | 20 | 172 | 8.90e-37 | 140 |
MsaG000859 | AT1G56010.1 | 37.991 | 229 | 117 | 9 | 327 | 541 | 2 | 219 | 2.65e-35 | 134 |
MsaG000859 | AT3G12977.2 | 47.059 | 153 | 60 | 5 | 327 | 464 | 14 | 160 | 3.92e-35 | 132 |
MsaG000859 | AT3G12910.1 | 38.378 | 185 | 95 | 6 | 268 | 434 | 9 | 192 | 2.52e-34 | 132 |
MsaG000859 | AT3G44290.2 | 40.556 | 180 | 87 | 6 | 279 | 453 | 16 | 180 | 6.08e-34 | 129 |
MsaG000859 | AT4G28530.2 | 47.059 | 136 | 57 | 1 | 269 | 389 | 2 | 137 | 7.57e-34 | 131 |
MsaG000859 | AT4G10350.2 | 57.798 | 109 | 40 | 3 | 323 | 427 | 7 | 113 | 1.24e-33 | 130 |
MsaG000859 | AT3G44290.1 | 40.556 | 180 | 87 | 6 | 279 | 453 | 16 | 180 | 4.20e-33 | 130 |
MsaG000859 | AT5G04395.1 | 44.371 | 151 | 69 | 3 | 269 | 405 | 20 | 169 | 3.32e-32 | 123 |
MsaG000859 | AT3G44350.2 | 35.542 | 166 | 100 | 3 | 275 | 434 | 3 | 167 | 2.37e-26 | 108 |
MsaG000859 | AT5G64530.1 | 36.782 | 174 | 78 | 6 | 277 | 433 | 3 | 161 | 9.66e-26 | 105 |
MsaG000859 | AT5G64530.2 | 42.748 | 131 | 58 | 4 | 277 | 405 | 3 | 118 | 1.70e-25 | 103 |
MsaG000859 | AT2G33480.3 | 54.167 | 96 | 41 | 2 | 333 | 427 | 10 | 103 | 2.26e-25 | 104 |
MsaG000859 | AT3G44350.1 | 38.462 | 143 | 83 | 2 | 275 | 413 | 3 | 144 | 5.34e-25 | 102 |
MsaG000859 | AT1G02230.1 | 43.846 | 130 | 66 | 5 | 278 | 403 | 4 | 130 | 4.12e-24 | 104 |
MsaG000859 | AT4G01550.1 | 37.748 | 151 | 87 | 3 | 280 | 427 | 7 | 153 | 1.89e-23 | 104 |
MsaG000859 | AT4G01520.1 | 34.239 | 184 | 113 | 4 | 278 | 457 | 5 | 184 | 2.31e-23 | 101 |
MsaG000859 | AT3G04420.2 | 39.416 | 137 | 78 | 3 | 278 | 411 | 4 | 138 | 2.64e-23 | 100 |
MsaG000859 | AT5G22380.1 | 40.310 | 129 | 71 | 3 | 280 | 403 | 8 | 135 | 5.11e-23 | 98.6 |
MsaG000859 | AT3G04420.1 | 40.602 | 133 | 74 | 3 | 278 | 407 | 4 | 134 | 5.85e-23 | 100 |
MsaG000859 | AT4G01540.4 | 36.306 | 157 | 92 | 4 | 280 | 432 | 7 | 159 | 8.26e-23 | 101 |
MsaG000859 | AT4G01540.2 | 36.306 | 157 | 92 | 4 | 280 | 432 | 7 | 159 | 1.78e-22 | 100 |
MsaG000859 | AT4G01540.3 | 36.306 | 157 | 92 | 4 | 280 | 432 | 7 | 159 | 1.82e-22 | 100 |
MsaG000859 | AT4G01540.1 | 36.306 | 157 | 92 | 4 | 280 | 432 | 7 | 159 | 2.93e-22 | 100 |
MsaG000859 | AT1G02250.1 | 38.462 | 130 | 73 | 4 | 278 | 403 | 4 | 130 | 1.28e-20 | 94.4 |
MsaG000859 | AT3G10490.4 | 56.250 | 80 | 31 | 2 | 351 | 428 | 2 | 79 | 4.21e-20 | 92.8 |
MsaG000859 | AT3G10490.3 | 56.250 | 80 | 31 | 2 | 351 | 428 | 2 | 79 | 4.21e-20 | 92.8 |
MsaG000859 | AT2G18060.2 | 34.266 | 143 | 89 | 3 | 356 | 496 | 2 | 141 | 2.80e-19 | 89.0 |
MsaG000859 | AT1G02220.1 | 37.984 | 129 | 72 | 4 | 278 | 403 | 4 | 127 | 3.08e-19 | 90.9 |
MsaG000859 | AT2G43000.2 | 41.758 | 91 | 49 | 2 | 339 | 427 | 1 | 89 | 2.69e-18 | 84.0 |
MsaG000859 | AT1G01010.1 | 37.594 | 133 | 72 | 5 | 280 | 403 | 6 | 136 | 4.51e-17 | 84.3 |
MsaG000859 | AT3G04430.1 | 33.775 | 151 | 84 | 5 | 283 | 419 | 6 | 154 | 7.23e-16 | 77.0 |
MsaG000859 | AT5G50820.1 | 32.192 | 146 | 72 | 6 | 277 | 412 | 17 | 145 | 1.43e-14 | 73.2 |
MsaG000859 | AT5G14000.1 | 33.125 | 160 | 97 | 6 | 277 | 433 | 15 | 167 | 3.85e-14 | 72.0 |
MsaG000859 | AT5G22290.2 | 45.783 | 83 | 34 | 3 | 357 | 439 | 2 | 73 | 6.63e-14 | 72.4 |
MsaG000859 | AT3G56530.1 | 30.612 | 147 | 98 | 3 | 273 | 417 | 48 | 192 | 5.29e-13 | 70.9 |
MsaG000859 | AT5G56620.3 | 30.286 | 175 | 90 | 6 | 277 | 425 | 43 | 211 | 1.54e-11 | 67.0 |
MsaG000859 | AT5G56620.2 | 30.286 | 175 | 90 | 6 | 277 | 425 | 43 | 211 | 1.59e-11 | 67.0 |
MsaG000859 | AT5G56620.1 | 30.682 | 176 | 88 | 7 | 277 | 425 | 43 | 211 | 2.54e-11 | 66.2 |
MsaG000859 | AT3G55210.1 | 27.647 | 170 | 105 | 5 | 276 | 432 | 10 | 174 | 3.13e-11 | 65.1 |
Find 156 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCCTCGTTCTTTCTCTTCT+AGG | 0.154847 | 1:-11669696 | MsaT000859.1:intron |
GGAGAAGGATTCACCATTTC+AGG | 0.161758 | 1:-11654707 | MsaT000859.1:CDS |
TTTCTTAGAATTCGCAAATA+TGG | 0.199348 | 1:+11667804 | None:intergenic |
AGGTTTGAAGACCGAGTTTC+TGG | 0.205358 | 1:+11667981 | None:intergenic |
AATATACCTATTGTAGAAAT+TGG | 0.207575 | 1:+11667943 | None:intergenic |
CCAACAATGATGCAGCATTT+AGG | 0.221902 | 1:-11654848 | MsaT000859.1:CDS |
CTAAGGGTGATGATGATAAA+TGG | 0.225370 | 1:+11654732 | None:intergenic |
GTTGGTTCTTATACTGGATT+TGG | 0.259797 | 1:+11656059 | None:intergenic |
TACCTTGTTGGTTCTTATAC+TGG | 0.266381 | 1:+11656053 | None:intergenic |
TCAAAATGATGAACTTCTTC+AGG | 0.280778 | 1:-11665262 | MsaT000859.1:intron |
GCTACTCATTTCCAGCTCTA+TGG | 0.284860 | 1:-11654815 | MsaT000859.1:CDS |
CAACAATGATGCAGCATTTA+GGG | 0.296732 | 1:-11654847 | MsaT000859.1:CDS |
GTAGCTTCTACCTAATCTTA+TGG | 0.309104 | 1:+11669903 | None:intergenic |
TAGCAAAGAAAGGAAGGATT+TGG | 0.310503 | 1:-11657087 | MsaT000859.1:CDS |
GCCATCAACTACTCATACTA+TGG | 0.320155 | 1:-11654630 | MsaT000859.1:CDS |
GTGTGGATCTTGATCATTAC+TGG | 0.322379 | 1:-11654448 | MsaT000859.1:CDS |
AAAGAACGAGGGAGATTATC+AGG | 0.345952 | 1:+11669706 | None:intergenic |
TTTGAGTCATCATCTATATC+TGG | 0.353896 | 1:+11665287 | None:intergenic |
TCAGGGCTTAATTTGAATCT+TGG | 0.354521 | 1:-11654689 | MsaT000859.1:CDS |
TCATAAATACCTTCTATTGT+TGG | 0.355093 | 1:+11669778 | None:intergenic |
CAACAGTGTTACATCAGAAT+TGG | 0.355460 | 1:-11656172 | MsaT000859.1:CDS |
GAGCAACAAACACTGGATAT+TGG | 0.356961 | 1:-11656224 | MsaT000859.1:CDS |
AATAATAATAACTTAGGGTT+TGG | 0.365351 | 1:-11654545 | MsaT000859.1:CDS |
ATGAACTTTGATAAAGGAAG+TGG | 0.376915 | 1:-11669739 | MsaT000859.1:CDS |
AGAGACAAGAAGAAAATCTT+TGG | 0.377277 | 1:-11669808 | MsaT000859.1:CDS |
GGCTCAACTCCAACAATAGA+AGG | 0.389067 | 1:-11669787 | MsaT000859.1:CDS |
GCAGAGAATAATAATAACTT+AGG | 0.389630 | 1:-11654551 | MsaT000859.1:CDS |
TGCGAGCCATGGGAGCTTCC+AGG | 0.393548 | 1:-11656909 | MsaT000859.1:intron |
TACTCAATGAACTTTGATAA+AGG | 0.399554 | 1:-11669745 | MsaT000859.1:CDS |
GTACAATATGCAGGGTACTA+TGG | 0.400982 | 1:-11654477 | MsaT000859.1:CDS |
ATCACTATTCACCTCCTTTG+TGG | 0.406981 | 1:-11660415 | MsaT000859.1:CDS |
GCAGGTCATCCTGCTCTAAT+TGG | 0.407029 | 1:-11665389 | MsaT000859.1:intron |
TGAATTCTTTGTGCAAAGAA+TGG | 0.408379 | 1:-11667758 | MsaT000859.1:CDS |
TCTCCACCAATTTCTACAAT+AGG | 0.413888 | 1:-11667949 | MsaT000859.1:intron |
AATTATATAATATACCTTGT+TGG | 0.426634 | 1:+11656041 | None:intergenic |
ATTCAAATTAAGCCCTGAAA+TGG | 0.426887 | 1:+11654694 | None:intergenic |
GATTTGAAGAAGCAAAGATT+TGG | 0.427351 | 1:-11669949 | MsaT000859.1:CDS |
GGTTGGTATGAAGAAAACTT+TGG | 0.429083 | 1:-11656151 | MsaT000859.1:CDS |
AATAATAACTTAGGGTTTGG+TGG | 0.433273 | 1:-11654542 | MsaT000859.1:CDS |
ACCGAGTTTCTGGAAGAGAT+TGG | 0.434596 | 1:+11667991 | None:intergenic |
GACCAACTTCTAGATTGATA+TGG | 0.439869 | 1:+11654900 | None:intergenic |
GTAAGATTTGAAGAAGAAGA+AGG | 0.440782 | 1:+11654944 | None:intergenic |
CATTTATCATCATCACCCTT+AGG | 0.446380 | 1:-11654731 | MsaT000859.1:CDS |
CTATTAGTTCTCACACCTGT+TGG | 0.449944 | 1:+11656246 | None:intergenic |
AGTTGTTAGCAAAGAAAGGA+AGG | 0.451453 | 1:-11657093 | MsaT000859.1:CDS |
CAAACCCTACTCATGGCAAT+AGG | 0.453517 | 1:-11654499 | MsaT000859.1:CDS |
GGTGAATCCTTCTCCTCCTA+AGG | 0.457239 | 1:+11654715 | None:intergenic |
GCTTGATGTGTGACTGGAAA+TGG | 0.458663 | 1:+11665356 | None:intergenic |
TAAGGGTGATGATGATAAAT+GGG | 0.459246 | 1:+11654733 | None:intergenic |
ACAACTCAAACCATAAGATT+AGG | 0.462343 | 1:-11669913 | MsaT000859.1:CDS |
ATGATGATGAAGAAGAAGAA+TGG | 0.465587 | 1:-11667834 | MsaT000859.1:CDS |
TTCTTATACTGGATTTGGAA+TGG | 0.468387 | 1:+11656064 | None:intergenic |
TGGCAATAGGTACAATATGC+AGG | 0.471195 | 1:-11654486 | MsaT000859.1:CDS |
GGGCTTAATTTGAATCTTGG+AGG | 0.471334 | 1:-11654686 | MsaT000859.1:CDS |
AGAGTATTCCGCAAGAGTGC+AGG | 0.472263 | 1:-11654980 | MsaT000859.1:CDS |
GAATTCTTTGTGCAAAGAAT+GGG | 0.472466 | 1:-11667757 | MsaT000859.1:CDS |
AGAAAGGAAGGATTTGGAAA+TGG | 0.473442 | 1:-11657081 | MsaT000859.1:CDS |
TATATATGCAGCAGGATGAA+TGG | 0.479522 | 1:-11655012 | MsaT000859.1:intron |
TACCATATCAATCTAGAAGT+TGG | 0.481646 | 1:-11654902 | MsaT000859.1:CDS |
GCCATAGTATGAGTAGTTGA+TGG | 0.484673 | 1:+11654629 | None:intergenic |
ATTGGTGGAGAGGTTAATGA+AGG | 0.485594 | 1:+11667961 | None:intergenic |
AAGAAGTTGTTAGCAAAGAA+AGG | 0.487064 | 1:-11657097 | MsaT000859.1:CDS |
TATAGTTCCTTCCATAGAGC+TGG | 0.487958 | 1:+11654804 | None:intergenic |
CTAGAGGAGAGAAAACCAAC+TGG | 0.491009 | 1:-11656107 | MsaT000859.1:CDS |
GGTAGGATGAAATCGAAATC+CGG | 0.491316 | 1:+11657025 | None:intergenic |
AGAGATCGTAAATATCCAAC+AGG | 0.491428 | 1:-11656261 | MsaT000859.1:CDS |
GAAGAGATTGGTTTCATCGA+TGG | 0.497755 | 1:+11668003 | None:intergenic |
CCTAAATGCTGCATCATTGT+TGG | 0.501547 | 1:+11654848 | None:intergenic |
TCATGGTAGCTTTGATAGTG+TGG | 0.502359 | 1:+11669874 | None:intergenic |
ATATATGCAGCAGGATGAAT+GGG | 0.505037 | 1:-11655011 | MsaT000859.1:intron |
ATTTATAGGGAAGGCCAAGA+TGG | 0.507478 | 1:-11656313 | MsaT000859.1:intron |
ATCTCAACAAATGCGAGCCA+TGG | 0.513090 | 1:-11656920 | MsaT000859.1:CDS |
ACTTCTAGATTGATATGGTA+AGG | 0.513737 | 1:+11654905 | None:intergenic |
AGGTATACCGCGGAGGGAGG+CGG | 0.517654 | 1:+11660385 | None:intergenic |
TCCGCAGCTTGATGTGTGAC+TGG | 0.521689 | 1:+11665350 | None:intergenic |
TGTACCTATTGCCATGAGTA+GGG | 0.521891 | 1:+11654495 | None:intergenic |
CAGAGAATAATAATAACTTA+GGG | 0.522455 | 1:-11654550 | MsaT000859.1:CDS |
CCAAGATGGGTACAAAAGAA+TGG | 0.522857 | 1:-11656299 | MsaT000859.1:CDS |
GGAAGGAACACGTGAGAAAG+AGG | 0.523705 | 1:-11657060 | MsaT000859.1:CDS |
AATAACTTAGGGTTTGGTGG+TGG | 0.530200 | 1:-11654539 | MsaT000859.1:CDS |
GAAATCGAAATCCGGGAGGT+AGG | 0.532076 | 1:+11657033 | None:intergenic |
TGATAAAGGAAGTGGGTGGA+TGG | 0.533937 | 1:-11669731 | MsaT000859.1:CDS |
TTGTACCTATTGCCATGAGT+AGG | 0.535715 | 1:+11654494 | None:intergenic |
CACTATCAAAGCTACCATGA+TGG | 0.538962 | 1:-11669871 | MsaT000859.1:CDS |
AAATGGGAATATTGATGCAT+TGG | 0.541252 | 1:+11654749 | None:intergenic |
TTCAACAGAAAGCTTCAGAA+TGG | 0.543755 | 1:-11668054 | MsaT000859.1:CDS |
ACTAATAGAGCAACAAACAC+TGG | 0.544961 | 1:-11656231 | MsaT000859.1:CDS |
ACTATTCACCTCCTTTGTGG+AGG | 0.545835 | 1:-11660412 | MsaT000859.1:CDS |
ACTATCAAAGCTACCATGAT+GGG | 0.547321 | 1:-11669870 | MsaT000859.1:CDS |
AAATCGAAATCCGGGAGGTA+GGG | 0.547523 | 1:+11657034 | None:intergenic |
TTCAGCTCCAACATGATGAC+AGG | 0.548671 | 1:-11654599 | MsaT000859.1:CDS |
TGCTGCATCATTGTTGGTGG+TGG | 0.549436 | 1:+11654854 | None:intergenic |
ATACCTATTGTAGAAATTGG+TGG | 0.550022 | 1:+11667946 | None:intergenic |
CGATGTCGACCAATTAGAGC+AGG | 0.550377 | 1:+11665380 | None:intergenic |
ACCAATCTCTTCCAGAAACT+CGG | 0.550908 | 1:-11667992 | MsaT000859.1:CDS |
GAGAAGGATTCACCATTTCA+GGG | 0.553123 | 1:-11654706 | MsaT000859.1:CDS |
TCTTTGCACCTGCACTCTTG+CGG | 0.553400 | 1:+11654972 | None:intergenic |
TCATCACCCTTAGGAGGAGA+AGG | 0.556810 | 1:-11654722 | MsaT000859.1:CDS |
ACATCACATGCAACTAGCAT+TGG | 0.559036 | 1:-11665318 | MsaT000859.1:CDS |
TTCTTTGTGCAAAGAATGGG+AGG | 0.560217 | 1:-11667754 | MsaT000859.1:CDS |
AAATGCTGCATCATTGTTGG+TGG | 0.560573 | 1:+11654851 | None:intergenic |
CTATTCACCTCCTTTGTGGA+GGG | 0.565851 | 1:-11660411 | MsaT000859.1:CDS |
TAAGATTTGAAGAAGAAGAA+GGG | 0.568739 | 1:+11654945 | None:intergenic |
TGCGAATTCTAAGAAAGAAG+AGG | 0.569572 | 1:-11667797 | MsaT000859.1:CDS |
ATTATTCTCTGCAGCAACAA+GGG | 0.570178 | 1:+11654562 | None:intergenic |
ATTTGCACCTGTCATCATGT+TGG | 0.570618 | 1:+11654592 | None:intergenic |
GTATGAGTAGTTGATGGCAT+TGG | 0.570711 | 1:+11654635 | None:intergenic |
GTAGGATGAAATCGAAATCC+GGG | 0.573405 | 1:+11657026 | None:intergenic |
TTTATAGGGAAGGCCAAGAT+GGG | 0.574283 | 1:-11656312 | MsaT000859.1:intron |
AGGAAGGATTTGGAAATGGA+AGG | 0.575195 | 1:-11657077 | MsaT000859.1:CDS |
CACATCAAGCTGCGGAGAGG+TGG | 0.577368 | 1:-11665343 | MsaT000859.1:CDS |
AAATAAAGTGATCAGTAAGA+AGG | 0.577405 | 1:+11654422 | None:intergenic |
TCTCAACAAATGCGAGCCAT+GGG | 0.580584 | 1:-11656919 | MsaT000859.1:CDS |
AATCTCCTTGTCTTTCCCTG+TGG | 0.581208 | 1:+11656197 | None:intergenic |
ACTGGATATTGGAAAACCAC+AGG | 0.581954 | 1:-11656213 | MsaT000859.1:CDS |
TATTGTAGAAATTGGTGGAG+AGG | 0.587892 | 1:+11667951 | None:intergenic |
AAAGAGGAAACCCTACCTCC+CGG | 0.588423 | 1:-11657044 | MsaT000859.1:CDS |
CTCATTTCCAGCTCTATGGA+AGG | 0.590822 | 1:-11654811 | MsaT000859.1:CDS |
TTATCATCATCACCCTTAGG+AGG | 0.591927 | 1:-11654728 | MsaT000859.1:CDS |
TATTATTCTCTGCAGCAACA+AGG | 0.597751 | 1:+11654561 | None:intergenic |
AATAATGCAAACCCTACTCA+TGG | 0.598055 | 1:-11654506 | MsaT000859.1:CDS |
GGCATATTATTATTAAAGCT+AGG | 0.598474 | 1:+11654875 | None:intergenic |
AGTGTTACATCAGAATTGGT+TGG | 0.599286 | 1:-11656168 | MsaT000859.1:CDS |
GGAAGGAACTATATCAACAC+TGG | 0.599703 | 1:-11654794 | MsaT000859.1:CDS |
GTGAATCCTTCTCCTCCTAA+GGG | 0.600976 | 1:+11654716 | None:intergenic |
GTGATGAGTTCTTCATCGGT+AGG | 0.602022 | 1:+11657008 | None:intergenic |
TACAAAGGTCGTGCTCCTAG+AGG | 0.602672 | 1:-11656123 | MsaT000859.1:CDS |
GTAAGTGATGAGTTCTTCAT+CGG | 0.604469 | 1:+11657004 | None:intergenic |
CAAAATAGTTTGTGAAGACG+TGG | 0.607429 | 1:+11654661 | None:intergenic |
ATATTCATGCATGACCCAGT+TGG | 0.607778 | 1:+11656092 | None:intergenic |
GGCAATAGGTACAATATGCA+GGG | 0.608820 | 1:-11654485 | MsaT000859.1:CDS |
GGGTACTATGGACCATTGTG+TGG | 0.616034 | 1:-11654465 | MsaT000859.1:CDS |
AGGGTCGCCGCCTCCCTCCG+CGG | 0.616912 | 1:-11660392 | MsaT000859.1:intron |
GAGGCGGCGACCCTCCACAA+AGG | 0.622365 | 1:+11660401 | None:intergenic |
TAAAGTGATCAGTAAGAAGG+TGG | 0.627141 | 1:+11654425 | None:intergenic |
GCGGCGACCCTCCACAAAGG+AGG | 0.627241 | 1:+11660404 | None:intergenic |
TGAACTTTGATAAAGGAAGT+GGG | 0.627661 | 1:-11669738 | MsaT000859.1:CDS |
CAGAAAGCTTCAGAATGGAG+TGG | 0.635695 | 1:-11668049 | MsaT000859.1:CDS |
AGAAGGTATACCGCGGAGGG+AGG | 0.645003 | 1:+11660382 | None:intergenic |
TCCAGTCACACATCAAGCTG+CGG | 0.649183 | 1:-11665351 | MsaT000859.1:CDS |
CTGGATATTGGAAAACCACA+GGG | 0.650427 | 1:-11656212 | MsaT000859.1:CDS |
ATATTATTATTAAAGCTAGG+AGG | 0.657871 | 1:+11654878 | None:intergenic |
ACCTAGAAGAGAAAGAACGA+GGG | 0.661702 | 1:+11669695 | None:intergenic |
TATGCAGCAGGATGAATGGG+TGG | 0.662923 | 1:-11655008 | MsaT000859.1:intron |
AGTAGAAGGTATACCGCGGA+GGG | 0.671447 | 1:+11660379 | None:intergenic |
ATCCAGTATAAGAACCAACA+AGG | 0.673356 | 1:-11656055 | MsaT000859.1:intron |
GAAAACCACAGGGAAAGACA+AGG | 0.680177 | 1:-11656202 | MsaT000859.1:CDS |
TAGAGGAGAGAAAACCAACT+GGG | 0.682123 | 1:-11656106 | MsaT000859.1:CDS |
TACCTAGAAGAGAAAGAACG+AGG | 0.683358 | 1:+11669694 | None:intergenic |
GAGTAGAAGGTATACCGCGG+AGG | 0.690341 | 1:+11660378 | None:intergenic |
TCACACATCAAGCTGCGGAG+AGG | 0.704071 | 1:-11665346 | MsaT000859.1:CDS |
TCTTTGTGCAAAGAATGGGA+GGG | 0.707440 | 1:-11667753 | MsaT000859.1:CDS |
AATGATCAAGATCCACACAA+TGG | 0.714365 | 1:+11654453 | None:intergenic |
GGATGAAATCGAAATCCGGG+AGG | 0.762260 | 1:+11657029 | None:intergenic |
ATGATGGGACAAAACCAGTG+TGG | 0.763400 | 1:-11669855 | MsaT000859.1:CDS |
ACTTTGATAAAGGAAGTGGG+TGG | 0.792260 | 1:-11669735 | MsaT000859.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 11654433 | 11669974 | 11654433 | ID=MsaG000859 |
Chr1 | mRNA | 11654433 | 11669974 | 11654433 | ID=MsaT000859.1;Parent=MsaG000859 |
Chr1 | exon | 11654433 | 11655023 | 11654433 | ID=MsaT000859.1.exon8;Parent=MsaT000859.1 |
Chr1 | CDS | 11654433 | 11655023 | 11654433 | ID=cds.MsaT000859.1;Parent=MsaT000859.1 |
Chr1 | exon | 11656056 | 11656327 | 11656056 | ID=MsaT000859.1.exon7;Parent=MsaT000859.1 |
Chr1 | CDS | 11656056 | 11656327 | 11656056 | ID=cds.MsaT000859.1;Parent=MsaT000859.1 |
Chr1 | exon | 11656910 | 11657126 | 11656910 | ID=MsaT000859.1.exon6;Parent=MsaT000859.1 |
Chr1 | CDS | 11656910 | 11657126 | 11656910 | ID=cds.MsaT000859.1;Parent=MsaT000859.1 |
Chr1 | exon | 11660393 | 11660441 | 11660393 | ID=MsaT000859.1.exon5;Parent=MsaT000859.1 |
Chr1 | CDS | 11660393 | 11660441 | 11660393 | ID=cds.MsaT000859.1;Parent=MsaT000859.1 |
Chr1 | exon | 11665263 | 11665407 | 11665263 | ID=MsaT000859.1.exon4;Parent=MsaT000859.1 |
Chr1 | CDS | 11665263 | 11665407 | 11665263 | ID=cds.MsaT000859.1;Parent=MsaT000859.1 |
Chr1 | exon | 11667728 | 11667861 | 11667728 | ID=MsaT000859.1.exon3;Parent=MsaT000859.1 |
Chr1 | CDS | 11667728 | 11667861 | 11667728 | ID=cds.MsaT000859.1;Parent=MsaT000859.1 |
Chr1 | exon | 11667950 | 11668099 | 11667950 | ID=MsaT000859.1.exon2;Parent=MsaT000859.1 |
Chr1 | CDS | 11667950 | 11668099 | 11667950 | ID=cds.MsaT000859.1;Parent=MsaT000859.1 |
Chr1 | exon | 11669697 | 11669974 | 11669697 | ID=MsaT000859.1.exon1;Parent=MsaT000859.1 |
Chr1 | CDS | 11669697 | 11669974 | 11669697 | ID=cds.MsaT000859.1;Parent=MsaT000859.1 |
Gene Sequence |
Protein sequence |