AlfalfaGEDB | MsaG001278

M. sativa ssp. caerulea / MsaG001278

KEGG: -
GO: GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009507 GO:0009536 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00010.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG001278	XP_013466599.1	90.691	333	20	5	1	328	29	355	0.0	590

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG001278	sp\|Q9LT23\|BH121_ARATH	50.996	251	114	4	42	290	49	292	1.97e-73	233

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG001278	tr\|A0A072VR73\|A0A072VR73_MEDTR	90.691	333	20	5	1	328	29	355	0.0	590

TFs/TRs:

Gene ID	Type	Classification
MsaG001278	TF	bHLH

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000117	MsaG001278	0.838219	6.018752e-57	2.222429e-54
MsaG000236	MsaG001278	0.804478	3.576871e-49	5.357330e-47
MsaG000287	MsaG001278	0.819435	2.033888e-52	4.407081e-50
MsaG000309	MsaG001278	0.849224	7.041740e-60	3.717008e-57
MsaG000450	MsaG001278	0.843503	2.512705e-58	1.096526e-55
MsaG000514	MsaG001278	0.814985	2.016480e-51	3.896553e-49
MsaG000534	MsaG001278	0.826428	4.855053e-54	1.270643e-51
MsaG000624	MsaG001278	0.831713	2.578263e-55	7.840128e-53
MsaG000662	MsaG001278	0.821707	6.155214e-53	1.416358e-50
MsaG000880	MsaG001278	0.856484	6.056743e-62	4.130190e-59
MsaG000884	MsaG001278	0.810792	1.655038e-50	2.881463e-48
MsaG001057	MsaG001278	0.801924	1.200874e-48	1.695887e-46
MsaG001001	MsaG001278	0.835502	2.948975e-56	1.002762e-53
MsaG001169	MsaG001278	0.834885	4.213478e-56	1.406516e-53
MsaG001238	MsaG001278	0.818367	3.547098e-52	7.474084e-50
MsaG001278	MsaG001366	0.865258	1.345170e-64	1.284158e-61
MsaG001278	MsaG001660	0.831361	3.145987e-55	9.467200e-53
MsaG001278	MsaG001724	0.801277	1.627131e-48	2.264289e-46
MsaG001278	MsaG001911	0.800028	2.917657e-48	3.947399e-46
MsaG001278	MsaG001991	0.824370	1.482713e-53	3.666367e-51
MsaG001278	MsaG002214	0.859718	6.687885e-63	5.144394e-60
MsaG001278	MsaG002350	0.804654	3.287797e-49	4.944512e-47
MsaG001278	MsaG002889	0.850894	2.411698e-60	1.348034e-57
MsaG001278	MsaG003161	0.845694	6.502821e-59	3.048830e-56
MsaG001278	MsaG003141	0.814393	2.722492e-51	5.183034e-49
MsaG001278	MsaG003192	0.819401	2.070872e-52	4.483165e-50
MsaG001278	MsaG003423	0.817529	5.473961e-52	1.128763e-49
MsaG001278	MsaG003560	0.809948	2.512903e-50	4.285873e-48
MsaG001278	MsaG003679	0.821907	5.534352e-53	1.280270e-50
MsaG001278	MsaG003728	0.834373	5.659986e-56	1.860741e-53
MsaG001278	MsaG003912	0.839859	2.273322e-57	8.835703e-55
MsaG001278	MsaG003964	0.811893	9.570084e-51	1.711775e-48
MsaG001278	MsaG004041	0.835655	2.698527e-56	9.217976e-54
MsaG001278	MsaG004048	0.809802	2.700184e-50	4.589276e-48
MsaG001278	MsaG004159	0.814061	3.220764e-51	6.080695e-49
MsaG001278	MsaG004164	0.802448	9.380869e-49	1.340743e-46
MsaG001278	MsaG004185	0.825789	6.876941e-54	1.768042e-51
MsaG001278	MsaG004290	0.833933	7.284871e-56	2.363558e-53
MsaG001278	MsaG004370	0.829050	1.146395e-54	3.228765e-52
MsaG001278	MsaG004361	0.823309	2.622425e-53	6.300014e-51
MsaG001278	MsaG004427	0.811217	1.339963e-50	2.357321e-48
MsaG001278	MsaG004431	0.807890	6.893376e-50	1.118863e-47
MsaG001278	MsaG004544	0.804403	3.705733e-49	5.540920e-47
MsaG001278	MsaG004648	0.864949	1.680410e-64	1.584329e-61
MsaG001278	MsaG004657	0.802745	8.149811e-49	1.172719e-46
MsaG001278	MsaG004684	0.810331	2.079569e-50	3.580148e-48
MsaG001278	MsaG004754	0.804571	3.420960e-49	5.134949e-47
MsaG001278	MsaG004793	0.835974	2.242209e-56	7.732894e-54
MsaG001278	MsaG005092	0.836863	1.335635e-56	4.731200e-54
MsaG001278	MsaG005201	0.809117	3.781311e-50	6.321372e-48
MsaG001278	MsaG005217	0.842497	4.639982e-58	1.960641e-55
MsaG001278	MsaG005346	0.800040	2.902075e-48	3.927290e-46
MsaG001278	MsaG005354	0.818487	3.332676e-52	7.044166e-50
MsaG001278	MsaG005584	0.826072	5.897377e-54	1.528184e-51
MsaG001278	MsaG005827	0.821690	6.209805e-53	1.428254e-50
MsaG001278	MsaG005993	0.812491	7.097436e-51	1.288407e-48
MsaG001278	MsaG005957	0.810701	1.731143e-50	3.007207e-48
MsaG001278	MsaG006151	0.831175	3.492076e-55	1.045230e-52
MsaG001278	MsaG006165	0.821837	5.744528e-53	1.326383e-50
MsaG001278	MsaG006120	0.802119	1.095244e-48	1.553565e-46
MsaG001278	MsaG006177	0.801891	1.219823e-48	1.721382e-46
MsaG001278	MsaG006225	0.801773	1.289495e-48	1.814755e-46
MsaG001278	MsaG006237	0.827905	2.160072e-54	5.891284e-52
MsaG001278	MsaG006249	0.825266	9.134989e-54	2.314779e-51
MsaG001278	MsaG006257	0.827674	2.452941e-54	6.646633e-52
MsaG001278	MsaG006343	0.810470	1.941154e-50	3.353255e-48
MsaG001278	MsaG006350	0.825397	8.509463e-54	2.164021e-51
MsaG001278	MsaG006387	0.826843	3.869454e-54	1.024399e-51
MsaG001278	MsaG006388	0.823666	2.164972e-53	5.251985e-51
MsaG001278	MsaG006423	0.832206	1.950355e-55	6.015855e-53
MsaG001278	MsaG006427	0.816534	9.137051e-52	1.836439e-49
MsaG001278	MsaG006440	0.856874	4.656157e-62	3.220365e-59
MsaG001278	MsaG006558	0.804288	3.914824e-49	5.838167e-47
MsaG001278	MsaG006623	0.803629	5.358943e-49	7.870144e-47
MsaG001278	MsaG006742	0.840770	1.317625e-57	5.269405e-55
MsaG001278	MsaG006755	0.817389	5.885768e-52	1.209317e-49
MsaG001278	MsaG006763	0.803316	6.217928e-49	9.065925e-47
MsaG001278	MsaG006877	0.813906	3.482827e-51	6.550204e-49
MsaG001278	MsaG006898	0.837690	8.219359e-57	2.985893e-54
MsaG001278	MsaG006884	0.836820	1.368970e-56	4.843261e-54
MsaG001278	MsaG006886	0.822358	4.354895e-53	1.019723e-50
MsaG001278	MsaG006918	0.823071	2.978205e-53	7.108907e-51
MsaG001278	MsaG006943	0.802428	9.466135e-49	1.352323e-46
MsaG001278	MsaG007070	0.816003	1.199476e-51	2.378352e-49
MsaG001278	MsaG007114	0.822244	4.627967e-53	1.080298e-50
MsaG001278	MsaG007214	0.808688	4.667005e-50	7.722006e-48
MsaG001278	MsaG007431	0.809107	3.800329e-50	6.351636e-48
MsaG001278	MsaG007543	0.833677	8.439503e-56	2.717776e-53
MsaG001278	MsaG007568	0.841699	7.528899e-58	3.100887e-55
MsaG001278	MsaG007600	0.819871	1.619357e-52	3.549268e-50
MsaG001278	MsaG007626	0.802768	8.061640e-49	1.160641e-46
MsaG001278	MsaG007652	0.818076	4.125473e-52	8.627718e-50
MsaG001278	MsaG007655	0.816148	1.113531e-51	2.216197e-49
MsaG001278	MsaG007861	0.813454	4.374966e-51	8.135105e-49
MsaG001278	MsaG008035	0.855915	8.876611e-62	5.927336e-59
MsaG001278	MsaG008069	0.801616	1.388008e-48	1.946469e-46
MsaG001278	MsaG008085	0.819805	1.676696e-52	3.668437e-50
MsaG001278	MsaG008105	0.818200	3.868825e-52	8.116927e-50
MsaG001278	MsaG008112	0.807427	8.633403e-50	1.385783e-47
MsaG001278	MsaG008166	0.809476	3.169780e-50	5.345261e-48
MsaG001278	MsaG008250	0.835859	2.396940e-56	8.238017e-54
MsaG001278	MsaG008256	0.803241	6.444319e-49	9.379789e-47
MsaG001278	MsaG008286	0.806689	1.235123e-49	1.948276e-47
MsaG001278	MsaG008479	0.815956	1.228923e-51	2.433878e-49
MsaG001278	MsaG008522	0.821546	6.703213e-53	1.535820e-50
MsaG001278	MsaG008592	0.800768	2.065893e-48	2.842104e-46
MsaG001278	MsaG008604	0.800542	2.296186e-48	3.142789e-46
MsaG001278	MsaG008697	0.807095	1.014439e-49	1.615498e-47
MsaG001278	MsaG008880	0.835683	2.654536e-56	9.075186e-54
MsaG001278	MsaG009007	0.839323	3.129666e-57	1.195986e-54
MsaG001278	MsaG009009	0.840515	1.535978e-57	6.093789e-55
MsaG001278	MsaG009060	0.805704	1.986688e-49	3.061698e-47
MsaG001278	MsaG009140	0.811949	9.305309e-51	1.666751e-48
MsaG001278	MsaG009456	0.809483	3.159835e-50	5.329365e-48
MsaG001278	MsaG009477	0.802887	7.620882e-49	1.100201e-46
MsaG001278	MsaG009781	0.827675	2.451217e-54	6.642210e-52
MsaG001278	MsaG009787	0.859205	9.516251e-63	7.179092e-60
MsaG001278	MsaG009850	0.804745	3.148190e-49	4.744627e-47
MsaG001278	MsaG009859	0.809711	2.823348e-50	4.788007e-48
MsaG001278	MsaG010213	0.839945	2.160060e-57	8.417876e-55
MsaG001278	MsaG010328	0.803380	6.032236e-49	8.808295e-47
MsaG001278	MsaG010372	0.803144	6.747976e-49	9.799698e-47
MsaG001278	MsaG010571	0.812802	6.072419e-51	1.110884e-48
MsaG001278	MsaG010768	0.832248	1.904288e-55	5.880867e-53
MsaG001278	MsaG011018	0.824626	1.291819e-53	3.216472e-51
MsaG001278	MsaG011248	0.825464	8.204842e-54	2.090452e-51
MsaG001278	MsaG011286	0.824324	1.519980e-53	3.753758e-51
MsaG001278	MsaG011405	0.830636	4.728107e-55	1.393375e-52
MsaG001278	MsaG011580	0.823571	2.279135e-53	5.514324e-51
MsaG001278	MsaG012160	0.802689	8.369372e-49	1.202778e-46
MsaG001278	MsaG012169	0.808710	4.617635e-50	7.644346e-48
MsaG001278	MsaG012170	0.834627	4.890439e-56	1.619964e-53
MsaG001278	MsaG012226	0.833871	7.551067e-56	2.445351e-53
MsaG001278	MsaG012203	0.827529	2.655695e-54	7.167095e-52
MsaG001278	MsaG012204	0.832973	1.261577e-55	3.979243e-53
MsaG001278	MsaG012248	0.823867	1.943972e-53	4.741311e-51
MsaG001278	MsaG012290	0.842393	4.944965e-58	2.082447e-55
MsaG001278	MsaG012446	0.802543	8.965789e-49	1.284229e-46
MsaG001278	MsaG012507	0.818678	3.018750e-52	6.412220e-50
MsaG001278	MsaG012553	0.817071	6.934428e-52	1.413161e-49
MsaG001278	MsaG012561	0.814438	2.661506e-51	5.072663e-49
MsaG001278	MsaG012586	0.816085	1.150546e-51	2.286055e-49
MsaG001278	MsaG012652	0.820295	1.296323e-52	2.873543e-50
MsaG001278	MsaG012778	0.847098	2.704527e-59	1.328674e-56
MsaG001278	MsaG013198	0.807831	7.093621e-50	1.149710e-47
MsaG001278	MsaG013321	0.834347	5.743764e-56	1.886827e-53
MsaG001278	MsaG013849	0.847580	1.995981e-59	9.966470e-57
MsaG001278	MsaG014215	0.833932	7.290210e-56	2.365195e-53
MsaG001278	MsaG014542	0.804931	2.879253e-49	4.358110e-47
MsaG001278	MsaG014543	0.837443	9.507951e-57	3.428202e-54
MsaG001278	MsaG014544	0.810869	1.593309e-50	2.779108e-48
MsaG001278	MsaG015081	0.812496	7.080086e-51	1.285424e-48
MsaG001278	MsaG015142	0.808078	6.288087e-50	1.025234e-47
MsaG001278	MsaG015143	0.887910	2.052055e-72	5.433151e-69
MsaG001278	MsaG015184	0.804264	3.960433e-49	5.902795e-47
MsaG001278	MsaG015364	0.823102	2.929434e-53	6.998105e-51
MsaG001278	MsaG015807	0.806566	1.310620e-49	2.061386e-47
MsaG001278	MsaG015809	0.800698	2.134225e-48	2.931551e-46
MsaG001278	MsaG015953	0.824280	1.557033e-53	3.840408e-51
MsaG001278	MsaG016058	0.806589	1.296125e-49	2.039705e-47
MsaG001278	MsaG016078	0.800065	2.867741e-48	3.883100e-46
MsaG001278	MsaG016571	0.814448	2.647757e-51	5.047706e-49
MsaG001278	MsaG017105	0.836272	1.884934e-56	6.559720e-54
MsaG001278	MsaG017150	0.825576	7.722276e-54	1.973592e-51
MsaG001278	MsaG017259	0.809075	3.860371e-50	6.446948e-48
MsaG001278	MsaG017376	0.800498	2.343242e-48	3.204004e-46
MsaG001278	MsaG017437	0.806861	1.136470e-49	1.799863e-47
MsaG001278	MsaG017473	0.802948	7.402796e-49	1.070219e-46
MsaG001278	MsaG017589	0.831114	3.614734e-55	1.080049e-52
MsaG001278	MsaG017614	0.838677	4.592899e-57	1.720267e-54
MsaG001278	MsaG017690	0.819948	1.555601e-52	3.416588e-50
MsaG001278	MsaG017888	0.809368	3.343653e-50	5.623321e-48
MsaG001278	MsaG018113	0.816639	8.658612e-52	1.744920e-49
MsaG001278	MsaG018135	0.867647	2.365088e-65	2.486661e-62
MsaG001278	MsaG018212	0.825111	9.936952e-54	2.507296e-51
MsaG001278	MsaG018240	0.812397	7.441468e-51	1.347677e-48
MsaG001278	MsaG018290	0.800562	2.274367e-48	3.114390e-46
MsaG001278	MsaG018309	0.809786	2.721540e-50	4.623748e-48
MsaG001278	MsaG018351	0.811270	1.305523e-50	2.299682e-48
MsaG001278	MsaG018417	0.852253	9.983040e-61	5.850821e-58
MsaG001278	MsaG018519	0.807927	6.767937e-50	1.099506e-47
MsaG001278	MsaG018809	0.812890	5.811656e-51	1.065493e-48
MsaG001278	MsaG018808	0.827830	2.251194e-54	6.126967e-52
MsaG001278	MsaG018891	0.801423	1.519647e-48	2.121760e-46
MsaG001278	MsaG018902	0.864008	3.295809e-64	2.992935e-61
MsaG001278	MsaG018909	0.806728	1.212181e-49	1.913821e-47
MsaG001278	MsaG019007	0.821529	6.762405e-53	1.548708e-50
MsaG001278	MsaG019132	0.844173	1.664939e-58	7.424738e-56
MsaG001278	MsaG019159	0.802678	8.414997e-49	1.209025e-46
MsaG001278	MsaG019178	0.807980	6.595214e-50	1.072783e-47
MsaG001278	MsaG019191	0.817089	6.869205e-52	1.400558e-49
MsaG001278	MsaG019215	0.832814	1.380682e-55	4.334634e-53
MsaG001278	MsaG019221	0.844704	1.200901e-58	5.449404e-56
MsaG001278	MsaG019273	0.830898	4.081452e-55	1.211953e-52
MsaG001278	MsaG019297	0.827086	3.387607e-54	9.029378e-52
MsaG001278	MsaG019354	0.841597	8.008779e-58	3.287856e-55
MsaG001278	MsaG019542	0.815319	1.700808e-51	3.314449e-49
MsaG001278	MsaG020062	0.812911	5.748630e-51	1.054520e-48
MsaG001278	MsaG020296	0.872262	7.459159e-67	9.518639e-64
MsaG001278	MsaG020353	0.833735	8.160256e-56	2.632322e-53
MsaG001278	MsaG020338	0.809797	2.706809e-50	4.599923e-48
MsaG001278	MsaG020402	0.859506	7.740559e-63	5.906279e-60
MsaG001278	MsaG020467	0.802713	8.273854e-49	1.189692e-46
MsaG001278	MsaG020574	0.802192	1.058284e-48	1.503660e-46
MsaG001278	MsaG020616	0.849273	6.824129e-60	3.607962e-57
MsaG001278	MsaG020645	0.821449	7.056654e-53	1.612641e-50
MsaG001278	MsaG020718	0.801302	1.608709e-48	2.239926e-46
MsaG001278	MsaG020787	0.865091	1.517467e-64	1.438840e-61
MsaG001278	MsaG020828	0.810756	1.685212e-50	2.931372e-48
MsaG001278	MsaG020888	0.837027	1.212850e-56	4.317758e-54
MsaG001278	MsaG020968	0.801019	1.836932e-48	2.541393e-46
MsaG001278	MsaG021423	0.869820	4.723384e-66	5.431995e-63
MsaG001278	MsaG021485	0.825261	9.164353e-54	2.321829e-51
MsaG001278	MsaG021544	0.800547	2.290087e-48	3.134862e-46
MsaG001278	MsaG021553	0.810909	1.561770e-50	2.726827e-48
MsaG001278	MsaG021973	0.829492	8.965562e-55	2.557250e-52
MsaG001278	MsaG022116	0.855676	1.041613e-61	6.895820e-59
MsaG001278	MsaG022094	0.805667	2.022417e-49	3.114008e-47
MsaG001278	MsaG022227	0.825723	7.129852e-54	1.829723e-51
MsaG001278	MsaG022494	0.839632	2.604417e-57	1.004967e-54
MsaG001278	MsaG022746	0.800789	2.045014e-48	2.814773e-46
MsaG001278	MsaG022895	0.817149	6.661608e-52	1.360301e-49
MsaG001278	MsaG023119	0.820008	1.507398e-52	3.316033e-50
MsaG001278	MsaG023120	0.817916	4.481146e-52	9.332989e-50
MsaG001278	MsaG023205	0.867696	2.281742e-65	2.403907e-62
MsaG001278	MsaG023396	0.830047	6.575421e-55	1.905564e-52
MsaG001278	MsaG023415	0.812542	6.918066e-51	1.257451e-48
MsaG001278	MsaG023475	0.812615	6.670177e-51	1.214554e-48
MsaG001278	MsaG023570	0.835760	2.539039e-56	8.700353e-54
MsaG001278	MsaG023810	0.806240	1.534017e-49	2.394259e-47
MsaG001278	MsaG023887	0.815397	1.634428e-51	3.191437e-49
MsaG001278	MsaG024009	0.815063	1.938129e-51	3.752469e-49
MsaG001278	MsaG024130	0.806902	1.113711e-49	1.765549e-47
MsaG001278	MsaG024546	0.823553	2.301095e-53	5.564699e-51
MsaG001278	MsaG025324	0.802040	1.136775e-48	1.609602e-46
MsaG001278	MsaG025418	0.802647	8.537868e-49	1.225822e-46
MsaG001278	MsaG025492	0.807862	6.988439e-50	1.133520e-47
MsaG001278	MsaG026849	0.812745	6.248297e-51	1.141426e-48
MsaG001278	MsaG026962	0.846363	4.285775e-59	2.054441e-56
MsaG001278	MsaG027027	0.837637	8.483438e-57	3.076822e-54
MsaG001278	MsaG027093	0.806634	1.268393e-49	1.998167e-47
MsaG001278	MsaG027160	0.802526	9.041868e-49	1.294599e-46
MsaG001278	MsaG027292	0.804101	4.281676e-49	6.357568e-47
MsaG001278	MsaG027383	0.804707	3.204490e-49	4.825202e-47
MsaG001278	MsaG027775	0.812796	6.090148e-51	1.113956e-48
MsaG001278	MsaG027819	0.811220	1.338262e-50	2.354471e-48
MsaG001278	MsaG027749	0.851787	1.352300e-60	7.796977e-58
MsaG001278	MsaG027992	0.805391	2.309277e-49	3.532894e-47
MsaG001278	MsaG028040	0.820307	1.288517e-52	2.857089e-50
MsaG001278	MsaG028043	0.802242	1.033709e-48	1.470400e-46
MsaG001278	MsaG028091	0.840713	1.363909e-57	5.444831e-55
MsaG001278	MsaG028256	0.827855	2.219724e-54	6.045558e-52
MsaG001278	MsaG028250	0.829016	1.167735e-54	3.285697e-52
MsaG001278	MsaG028487	0.808928	4.148858e-50	6.904322e-48
MsaG001278	MsaG028609	0.808112	6.185184e-50	1.009269e-47
MsaG001278	MsaG028665	0.810188	2.231310e-50	3.827922e-48
MsaG001278	MsaG028713	0.845733	6.344635e-59	2.978529e-56
MsaG001278	MsaG028862	0.800335	2.529094e-48	3.445367e-46
MsaG001278	MsaG028935	0.802395	9.615746e-49	1.372676e-46
MsaG001278	MsaG028937	0.813452	4.380601e-51	8.145111e-49
MsaG001278	MsaG028990	0.830833	4.233653e-55	1.254781e-52
MsaG001278	MsaG029132	0.814154	3.072489e-51	5.814250e-49
MsaG001278	MsaG029232	0.839937	2.169971e-57	8.454560e-55
MsaG001278	MsaG029345	0.809644	2.919154e-50	4.942338e-48
MsaG001278	MsaG029470	0.807798	7.209333e-50	1.167529e-47
MsaG001278	MsaG029950	0.814429	2.673594e-51	5.094574e-49
MsaG001278	MsaG030267	0.827085	3.389981e-54	9.035344e-52
MsaG001278	MsaG030237	0.821414	7.186601e-53	1.640831e-50
MsaG001278	MsaG030510	0.803710	5.157717e-49	7.589009e-47
MsaG001278	MsaG030804	0.819213	2.284191e-52	4.920676e-50
MsaG001278	MsaG031058	0.802274	1.018146e-48	1.449376e-46
MsaG001278	MsaG031652	0.816059	1.165785e-51	2.314790e-49
MsaG001278	MsaG032064	0.807403	8.733399e-50	1.401041e-47
MsaG001278	MsaG032101	0.832857	1.347330e-55	4.235299e-53
MsaG001278	MsaG032228	0.823548	2.307407e-53	5.579220e-51
MsaG001278	MsaG032504	0.828739	1.362186e-54	3.802934e-52
MsaG001278	MsaG033134	0.804587	3.393908e-49	5.096217e-47
MsaG001278	MsaG033480	0.803286	6.309055e-49	9.192338e-47
MsaG001278	MsaG033688	0.840285	1.762863e-57	6.943628e-55
MsaG001278	MsaG033863	0.832276	1.874175e-55	5.792698e-53
MsaG001278	MsaG034207	0.801769	1.291500e-48	1.817428e-46
MsaG001278	MsaG034444	0.837780	7.798681e-57	2.840932e-54
MsaG001278	MsaG034548	0.818344	3.589686e-52	7.559286e-50
MsaG001278	MsaG034601	0.827497	2.703271e-54	7.288719e-52
MsaG001278	MsaG034605	0.824378	1.476664e-53	3.652097e-51
MsaG001278	MsaG034633	0.836203	1.962180e-56	6.814159e-54
MsaG001278	MsaG034673	0.837785	7.775263e-57	2.832854e-54
MsaG001278	MsaG034861	0.829835	7.402294e-55	2.132191e-52
MsaG001278	MsaG035054	0.820043	1.479385e-52	3.257529e-50
MsaG001278	MsaG035118	0.803820	4.895027e-49	7.220704e-47
MsaG001278	MsaG035128	0.828049	1.994981e-54	5.463034e-52
MsaG001278	MsaG035317	0.826955	3.639416e-54	9.665410e-52
MsaG001278	MsaG035439	0.818086	4.103684e-52	8.584303e-50
MsaG001278	MsaG035987	0.830913	4.046434e-55	1.202078e-52
MsaG001278	MsaG036420	0.815634	1.448340e-51	2.845139e-49
MsaG001278	MsaG036523	0.827082	3.395681e-54	9.049770e-52
MsaG001278	MsaG036577	0.807297	9.195275e-50	1.471405e-47
MsaG001278	MsaG037061	0.825060	1.021568e-53	2.574045e-51
MsaG001278	MsaG037874	0.817813	4.727629e-52	9.820316e-50
MsaG001278	MsaG038043	0.813109	5.204259e-51	9.593724e-49
MsaG001278	MsaG038528	0.808468	5.196786e-50	8.552892e-48
MsaG001278	MsaG039166	0.812497	7.074766e-51	1.284505e-48
MsaG001278	MsaG039418	0.814443	2.654623e-51	5.060176e-49
MsaG001278	MsaG039438	0.810333	2.076943e-50	3.575887e-48
MsaG001278	MsaG039760	0.802440	9.416455e-49	1.345576e-46
MsaG001278	MsaG039946	0.811079	1.435039e-50	2.516074e-48
MsaG001278	MsaG039924	0.823775	2.042408e-53	4.969267e-51
MsaG001278	MsaG040026	0.816219	1.073962e-51	2.141274e-49
MsaG001278	MsaG040093	0.856450	6.196659e-62	4.220251e-59
MsaG001278	MsaG040350	0.801579	1.412384e-48	1.978950e-46
MsaG001278	MsaG040417	0.828516	1.541341e-54	4.276581e-52
MsaG001278	MsaG040435	0.805637	2.051178e-49	3.156204e-47
MsaG001278	MsaG040474	0.829793	7.578520e-55	2.180329e-52
MsaG001278	MsaG040499	0.804942	2.864282e-49	4.336567e-47
MsaG001278	MsaG040578	0.835456	3.028613e-56	1.028418e-53
MsaG001278	MsaG040583	0.822982	3.123588e-53	7.437909e-51
MsaG001278	MsaG041358	0.803091	6.917616e-49	1.003407e-46
MsaG001278	MsaG041463	0.816392	9.826541e-52	1.967877e-49
MsaG001278	MsaG042142	0.861727	1.653884e-63	1.373398e-60
MsaG001278	MsaG042222	0.800705	2.127259e-48	2.922438e-46
MsaG001278	MsaG042510	0.828607	1.465037e-54	4.075294e-52
MsaG001278	MsaG042557	0.815839	1.304330e-51	2.575532e-49
MsaG001278	MsaG042535	0.817124	6.745427e-52	1.376566e-49
MsaG001278	MsaG042898	0.874812	1.042596e-67	1.487240e-64
MsaG001278	MsaG043017	0.803656	5.291020e-49	7.775376e-47
MsaG001278	MsaG043133	0.826473	4.736947e-54	1.241298e-51
MsaG001278	MsaG043225	0.812707	6.369565e-51	1.162487e-48
MsaG001278	MsaG043392	0.812726	6.310471e-51	1.152226e-48
MsaG001278	MsaG043414	0.856248	7.097362e-62	4.798143e-59
MsaG001278	MsaG043506	0.825457	8.237337e-54	2.098313e-51
MsaG001278	MsaG043571	0.819969	1.537993e-52	3.379905e-50
MsaG001278	MsaG043563	0.803675	5.243026e-49	7.708302e-47
MsaG001278	MsaG043881	0.842229	5.461086e-58	2.287507e-55
MsaG001278	MsaG043976	0.808042	6.401185e-50	1.042755e-47
MsaG001278	MsaG044048	0.819365	2.109926e-52	4.563526e-50
MsaG001278	MsaG044106	0.838063	6.598381e-57	2.424797e-54
MsaG001278	MsaG044319	0.819838	1.647147e-52	3.607033e-50
MsaG001278	MsaG044333	0.844138	1.701972e-58	7.581138e-56
MsaG001278	MsaG044614	0.808228	5.843946e-50	9.562512e-48
MsaG001278	MsaG044623	0.819175	2.330323e-52	5.015110e-50
MsaG001278	MsaG044880	0.806481	1.365995e-49	2.144184e-47
MsaG001278	MsaG044983	0.807225	9.522773e-50	1.521157e-47
MsaG001278	MsaG045004	0.825998	6.137685e-54	1.587227e-51
MsaG001278	MsaG045200	0.802351	9.820840e-49	1.400523e-46
MsaG001278	MsaG045353	0.801984	1.167397e-48	1.650847e-46
MsaG001278	MsaG045392	0.836990	1.239442e-56	4.407408e-54
MsaG001278	MsaG045461	0.823491	2.377985e-53	5.741097e-51
MsaG001278	MsaG045536	0.853896	3.398312e-61	2.110599e-58
MsaG001278	MsaG045576	0.814916	2.088215e-51	4.028131e-49
MsaG001278	MsaG045609	0.800574	2.262183e-48	3.098535e-46
MsaG001278	MsaG045740	0.800577	2.258136e-48	3.093270e-46
MsaG001278	MsaG045699	0.820478	1.177645e-52	2.623032e-50
MsaG001278	MsaG045745	0.831837	2.403830e-55	7.336027e-53
MsaG001278	MsaG045873	0.871063	1.855191e-66	2.248701e-63
MsaG001278	MsaG045965	0.813422	4.445916e-51	8.260473e-49
MsaG001278	MsaG045974	0.820405	1.223605e-52	2.720177e-50
MsaG001278	MsaG045997	0.857652	2.749715e-62	1.957185e-59
MsaG001278	MsaG045984	0.835643	2.718242e-56	9.281725e-54
MsaG001278	MsaG046225	0.800246	2.636129e-48	3.583968e-46
MsaG001278	MsaG046247	0.861604	1.802230e-63	1.489533e-60
MsaG001278	MsaG046277	0.810949	1.530940e-50	2.675621e-48
MsaG001278	MsaG046279	0.819481	1.986157e-52	4.308795e-50
MsaG001278	MsaG046303	0.829762	7.709283e-55	2.215969e-52
MsaG001278	MsaG046312	0.810687	1.743239e-50	3.027176e-48
MsaG001278	MsaG046554	0.813227	4.905576e-51	9.070077e-49
MsaG001278	MsaG046703	0.805514	2.176373e-49	3.339075e-47
MsaG001278	MsaG046733	0.806284	1.502187e-49	2.347008e-47
MsaG001278	MsaG046746	0.809543	3.067848e-50	5.181591e-48
MsaG001278	MsaG046895	0.815487	1.561582e-51	3.055977e-49
MsaG001278	MsaG046946	0.849433	6.162817e-60	3.276412e-57
MsaG001278	MsaG001077	0.827533	2.650104e-54	7.152758e-52
MsaG001278	MsaG000837	0.849502	5.897116e-60	3.142596e-57
MsaG001278	MsaG002575	0.832731	1.447489e-55	4.533677e-53
MsaG001278	MsaG004304	0.814634	2.410105e-51	4.616000e-49
MsaG001278	MsaG004474	0.800841	1.996654e-48	2.751309e-46
MsaG001278	MsaG001947	0.835032	3.870805e-56	1.297859e-53
MsaG001278	MsaG002774	0.804768	3.113737e-49	4.695190e-47
MsaG001278	MsaG002307	0.806575	1.304965e-49	2.052949e-47
MsaG001278	MsaG000843	0.802531	9.020067e-49	1.291626e-46
MsaG001278	MsaG007338	0.805255	2.465064e-49	3.759330e-47
MsaG001278	MsaG008854	0.845804	6.073289e-59	2.857701e-56
MsaG001278	MsaG009633	0.842218	5.499317e-58	2.302681e-55
MsaG001278	MsaG009207	0.814650	2.390154e-51	4.579687e-49
MsaG001278	MsaG010534	0.820486	1.172453e-52	2.612084e-50
MsaG001278	MsaG008766	0.840662	1.406398e-57	5.605428e-55
MsaG001278	MsaG006602	0.842147	5.738766e-58	2.397541e-55
MsaG001278	MsaG014349	0.842112	5.864597e-58	2.447371e-55
MsaG001278	MsaG013008	0.827227	3.136273e-54	8.392240e-52
MsaG001278	MsaG015244	0.802117	1.096564e-48	1.555347e-46
MsaG001278	MsaG016152	0.867904	1.958067e-65	2.080409e-62
MsaG001278	MsaG012824	0.812969	5.585038e-51	1.025993e-48
MsaG001278	MsaG013115	0.800108	2.811096e-48	3.810007e-46
MsaG001278	MsaG012483	0.804972	2.823412e-49	4.277652e-47
MsaG001278	MsaG011633	0.824244	1.587218e-53	3.911075e-51
MsaG001278	MsaG013857	0.832972	1.262072e-55	3.980737e-53
MsaG001278	MsaG014799	0.802534	9.003749e-49	1.289412e-46
MsaG001278	MsaG013372	0.814712	2.316418e-51	4.445299e-49
MsaG001278	MsaG015300	0.806724	1.214356e-49	1.917075e-47
MsaG001278	MsaG013434	0.826907	3.736451e-54	9.909580e-52
MsaG001278	MsaG013071	0.835204	3.503554e-56	1.180725e-53
MsaG001278	MsaG021945	0.863779	3.881930e-64	3.493451e-61
MsaG001278	MsaG024279	0.842266	5.339676e-58	2.239370e-55
MsaG001278	MsaG018567	0.826564	4.509312e-54	1.184533e-51
MsaG001278	MsaG019592	0.807508	8.302126e-50	1.335179e-47
MsaG001278	MsaG019319	0.820881	9.521377e-53	2.143482e-50
MsaG001278	MsaG019753	0.823398	2.499815e-53	6.020043e-51
MsaG001278	MsaG027643	0.856753	5.053445e-62	3.479857e-59
MsaG001278	MsaG027790	0.803788	4.969997e-49	7.325869e-47
MsaG001278	MsaG027101	0.840763	1.323705e-57	5.292361e-55
MsaG001278	MsaG029395	0.811343	1.259091e-50	2.221857e-48
MsaG001278	MsaG025855	0.842916	3.595226e-58	1.539615e-55
MsaG001278	MsaG027262	0.800118	2.798607e-48	3.793836e-46
MsaG001278	MsaG032663	0.807970	6.628162e-50	1.077864e-47
MsaG001278	MsaG034613	0.826733	4.110501e-54	1.084904e-51
MsaG001278	MsaG033462	0.821753	6.007170e-53	1.383946e-50
MsaG001278	MsaG032342	0.850507	3.094071e-60	1.706458e-57
MsaG001278	MsaG033161	0.801704	1.332030e-48	1.871687e-46
MsaG001278	MsaG030982	0.803840	4.847634e-49	7.154186e-47
MsaG001278	MsaG030924	0.805788	1.907681e-49	2.945734e-47
MsaG001278	MsaG033458	0.803337	6.157901e-49	8.982623e-47
MsaG001278	MsaG031225	0.809152	3.717817e-50	6.220341e-48
MsaG001278	MsaG032865	0.826417	4.886096e-54	1.278311e-51
MsaG001278	MsaG034520	0.855137	1.492779e-61	9.691142e-59
MsaG001278	MsaG034532	0.812557	6.865134e-51	1.248298e-48
MsaG001278	MsaG030136	0.818114	4.044350e-52	8.466471e-50
MsaG001278	MsaG030752	0.800028	2.917657e-48	3.947399e-46
MsaG001278	MsaG031107	0.828964	1.201959e-54	3.376995e-52
MsaG001278	MsaG033182	0.827140	3.289377e-54	8.780625e-52
MsaG001278	MsaG031628	0.801520	1.451919e-48	2.031658e-46
MsaG001278	MsaG034183	0.816679	8.482628e-52	1.711252e-49
MsaG001278	MsaG033058	0.819548	1.917822e-52	4.167670e-50
MsaG001278	MsaG031222	0.812581	6.785123e-51	1.234474e-48
MsaG001278	MsaG030000	0.874776	1.072095e-67	1.526822e-64
MsaG001278	MsaG033283	0.834268	6.011345e-56	1.969908e-53
MsaG001278	MsaG032866	0.823959	1.849715e-53	4.522737e-51
MsaG001278	MsaG031699	0.826688	4.213938e-54	1.110792e-51
MsaG001278	MsaG037377	0.832435	1.713047e-55	5.319144e-53
MsaG001278	MsaG035814	0.827957	2.098130e-54	5.730712e-52
MsaG001278	MsaG036784	0.841668	7.669737e-58	3.155855e-55
MsaG001278	MsaG036358	0.828665	1.418920e-54	3.953238e-52
MsaG001278	MsaG039794	0.814171	3.046782e-51	5.768121e-49
MsaG001278	MsaG040619	0.817440	5.732594e-52	1.179394e-49
MsaG001278	MsaG036457	0.826741	4.092054e-54	1.080276e-51
MsaG001278	MsaG038711	0.877078	1.748802e-68	2.760096e-65
MsaG001278	MsaG037879	0.801680	1.346953e-48	1.891638e-46
MsaG001278	MsaG037513	0.848533	1.092846e-59	5.633870e-57
MsaG001278	MsaG036623	0.807153	9.865355e-50	1.573204e-47
MsaG001278	MsaG035918	0.884166	5.189543e-71	1.141456e-67
MsaG001278	MsaG036743	0.822847	3.355523e-53	7.961293e-51
MsaG001278	MsaG036872	0.852075	1.121692e-60	6.533250e-58
MsaG001278	MsaG044907	0.809309	3.441644e-50	5.779782e-48
MsaG001278	MsaG041479	0.801192	1.693770e-48	2.352503e-46
MsaG001278	MsaG042698	0.811811	9.968552e-51	1.779472e-48
MsaG001278	MsaG041446	0.806916	1.106332e-49	1.754393e-47
MsaG001278	MsaG042833	0.819218	2.278705e-52	4.909531e-50
MsaG001278	MsaG047040	0.823472	2.402530e-53	5.797307e-51

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG001278	MtrunA17_Chr1g0161461	90.691	333	20	5	1	328	29	355	0.0	590
MsaG001278	MtrunA17_Chr4g0038511	57.676	241	85	5	51	284	6	236	1.36e-79	244
MsaG001278	MtrunA17_Chr4g0060591	43.137	102	58	0	50	151	27	128	1.27e-22	94.4
MsaG001278	MtrunA17_Chr4g0042041	37.838	148	80	4	5	148	35	174	7.55e-20	87.0
MsaG001278	MtrunA17_Chr2g0319301	44.000	100	51	2	56	154	74	169	1.34e-19	86.3
MsaG001278	MtrunA17_Chr2g0323031	44.565	92	50	1	56	146	110	201	9.05e-18	81.6
MsaG001278	MtrunA17_Chr1g0167821	37.423	163	76	6	56	217	95	232	2.60e-17	80.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG001278	AT3G19860.1	51.639	244	109	4	49	290	3	239	1.70e-75	234
MsaG001278	AT3G19860.3	50.996	251	114	4	42	290	27	270	5.41e-75	233
MsaG001278	AT3G19860.2	50.996	251	114	4	42	290	49	292	2.00e-74	233
MsaG001278	AT4G36060.2	40.486	247	95	8	55	289	30	236	1.13e-47	162
MsaG001278	AT4G36060.1	40.486	247	95	8	55	289	48	254	4.35e-47	160
MsaG001278	AT4G36060.4	40.506	237	90	7	55	280	30	226	1.38e-45	156
MsaG001278	AT4G36060.3	40.506	237	90	7	55	280	48	244	4.94e-45	155
MsaG001278	AT5G54680.1	43.000	100	52	2	56	154	76	171	6.50e-19	84.7
MsaG001278	AT3G23210.2	39.130	138	73	5	56	182	138	275	1.10e-18	85.1
MsaG001278	AT3G23210.1	39.130	138	73	5	56	182	167	304	2.03e-18	84.7
MsaG001278	AT1G51070.1	45.745	94	50	1	56	148	71	164	4.76e-17	79.3
MsaG001278	AT1G51070.2	45.745	94	50	1	56	148	137	230	1.15e-16	79.3
MsaG001278	AT3G47640.1	33.645	107	71	0	50	156	26	132	2.61e-16	77.4
MsaG001278	AT3G47640.3	33.645	107	71	0	50	156	26	132	2.61e-16	77.4
MsaG001278	AT3G47640.2	33.645	107	71	0	50	156	26	132	2.61e-16	77.4
MsaG001278	AT4G14410.2	34.028	144	73	4	56	198	129	251	3.37e-14	72.0
MsaG001278	AT4G14410.3	34.028	144	73	4	56	198	129	251	3.37e-14	72.0
MsaG001278	AT4G14410.1	34.028	144	73	4	56	198	135	257	4.44e-14	72.0

Find 83 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGGAATATGACCAGGATTT+TGG	0.212723	1:-17720964	None:intergenic
CATCAATTGGGAAACGTAAT+AGG	0.223751	1:+17719738	MsaT001278.1:CDS
ATAGGAACGGGGTACGTATA+AGG	0.292057	1:-17720872	None:intergenic
TTAAAGACGCTTTCTCTTCT+CGG	0.308272	1:-17720754	None:intergenic
GTGTTTAGCGGCGGAGGCGG+TGG	0.314738	1:-17719463	None:intergenic
TTGTCATTCCGTGGTCTATC+AGG	0.332142	1:-17720522	None:intergenic
CTCAATGTATATTCCATTCT+CGG	0.354937	1:+17720994	MsaT001278.1:CDS
TCAAGCTCTGTTGCCACATC+TGG	0.367803	1:-17721154	None:intergenic
TGAGCTGATGGCATCTCTAT+TGG	0.379396	1:-17721031	None:intergenic
AGGCTGACCGTGAGAAAATC+AGG	0.380020	1:+17719691	MsaT001278.1:CDS
GAGCCAGTATTCTGCATCTC+AGG	0.388043	1:+17721369	MsaT001278.1:CDS
AAAGTCAATTAACTAGCCTT+TGG	0.391631	1:-17721427	None:intergenic
ATCTCTATTGGAGGGATAGC+TGG	0.399284	1:-17721019	None:intergenic
ATTGGCATTGGCATAGGAAC+GGG	0.403675	1:-17720884	None:intergenic
GTCCCTGAGATGCAGAATAC+TGG	0.415172	1:-17721372	None:intergenic
TGTTTAGCGGCGGAGGCGGT+GGG	0.428409	1:-17719462	None:intergenic
TTGAATTGTCTCTGTGATGA+TGG	0.441426	1:-17720550	None:intergenic
TAGGAACGGGGTACGTATAA+GGG	0.451220	1:-17720871	None:intergenic
TGGAGTGTTGCTGACGCTGT+TGG	0.452978	1:-17721407	None:intergenic
TTCGAGGTGTTTAGCGGCGG+AGG	0.460101	1:-17719469	None:intergenic
TGGTTTCCATAGTAAGGAAA+AGG	0.470758	1:-17720944	None:intergenic
GAGCTTGAGCTTAAGATGCC+TGG	0.473388	1:+17721169	MsaT001278.1:CDS
GCCTGGATCATCAACACAAC+AGG	0.473485	1:+17721186	MsaT001278.1:CDS
GGGTGAATGGAAACCGGACC+AGG	0.474052	1:-17720911	None:intergenic
AATGCCAATCCCTCCTGGTC+CGG	0.475088	1:+17720898	MsaT001278.1:CDS
GCATGGCTCTGACTCTCTGC+TGG	0.479835	1:-17720808	None:intergenic
GTGATTCTTCTGCCGCAGTA+AGG	0.481448	1:-17719501	None:intergenic
AGGTTGCATAGGTGGGTGAA+TGG	0.481673	1:-17720924	None:intergenic
GAAACCGGACCAGGAGGGAT+TGG	0.482079	1:-17720902	None:intergenic
AATATCTTTACGATTGGTGA+TGG	0.482957	1:-17719533	None:intergenic
GAGGTGTTTAGCGGCGGAGG+CGG	0.484202	1:-17719466	None:intergenic
CTAAACACGTGGGATGTAGA+AGG	0.488709	1:-17721058	None:intergenic
CCTGACAATATCTTTACGAT+TGG	0.490047	1:-17719539	None:intergenic
ATGCCAATGCCAATCCCTCC+TGG	0.495420	1:+17720893	MsaT001278.1:CDS
GGGATAGCTGGAGCCGAGAA+TGG	0.495557	1:-17721007	None:intergenic
TTACGATTGGTGATGGGCAG+CGG	0.497262	1:-17719526	None:intergenic
TACTATGGAAACCAAAATCC+TGG	0.503568	1:+17720953	MsaT001278.1:CDS
TAAGGAAAAGGTTGCATAGG+TGG	0.507917	1:-17720932	None:intergenic
GTGTAGAGAGAAGAGTGAGA+TGG	0.512423	1:+17719635	MsaT001278.1:intron
AGAGACAATTCAAGTGCTAA+AGG	0.518046	1:+17720560	MsaT001278.1:CDS
TTTCTAGCAACAACAACACT+TGG	0.522874	1:-17719660	None:intergenic
CCAATCGTAAAGATATTGTC+AGG	0.525025	1:+17719539	MsaT001278.1:CDS
TGCAACACATGATCAATCAA+TGG	0.526037	1:+17719437	None:intergenic
AATTGCAGTCCATGGTGGCA+TGG	0.531488	1:-17720825	None:intergenic
GCTGATGGCATCTCTATTGG+AGG	0.536435	1:-17721028	None:intergenic
CTATAGGATTGCACATCTAG+AGG	0.536684	1:+17721289	MsaT001278.1:intron
CTACATCTTTCTGCATCACT+AGG	0.537613	1:-17721124	None:intergenic
ACCTGTTGTGTTGATGATCC+AGG	0.545050	1:-17721187	None:intergenic
GGAGGGATTGGCATTGGCAT+AGG	0.546018	1:-17720890	None:intergenic
GAATGGTCAATTGCAGTCCA+TGG	0.547989	1:-17720833	None:intergenic
ATAGGTGGGTGAATGGAAAC+CGG	0.548801	1:-17720917	None:intergenic
CTAGGTCTTCTTCTATGACC+TGG	0.556746	1:-17721106	None:intergenic
GGACCAGGAGGGATTGGCAT+TGG	0.561637	1:-17720896	None:intergenic
TAGTAAGGAAAAGGTTGCAT+AGG	0.564004	1:-17720935	None:intergenic
TGATTCTTCTGCCGCAGTAA+GGG	0.566675	1:-17719500	None:intergenic
AAGGAAAAGGTTGCATAGGT+GGG	0.567952	1:-17720931	None:intergenic
GATTGGCATTGGCATAGGAA+CGG	0.568920	1:-17720885	None:intergenic
GTAGAAGGATACTGAGCTGA+TGG	0.572163	1:-17721043	None:intergenic
ATATCTTTACGATTGGTGAT+GGG	0.578157	1:-17719532	None:intergenic
TGTTGCTAGAAAAGTTCAGA+AGG	0.582816	1:+17719671	MsaT001278.1:CDS
AGCCAGTATTCTGCATCTCA+GGG	0.590410	1:+17721370	MsaT001278.1:CDS
ATATACATTGAGGATAGACT+TGG	0.594802	1:-17720983	None:intergenic
TCTTCTGCCGCAGTAAGGGA+TGG	0.602962	1:-17719496	None:intergenic
GAGTCTCGAAGCAAGTCACC+AGG	0.602988	1:+17721088	MsaT001278.1:CDS
AGAGCATAAATCACTTTCTG+AGG	0.607090	1:+17720614	MsaT001278.1:CDS
CGAGAATGGAATATACATTG+AGG	0.609687	1:-17720993	None:intergenic
GATAGACTTGGAATATGACC+AGG	0.610908	1:-17720971	None:intergenic
CGATTGGTGATGGGCAGCGG+AGG	0.614010	1:-17719523	None:intergenic
ATGGTTGCCTTGTCATTCCG+TGG	0.623588	1:-17720531	None:intergenic
TGAATGGAAACCGGACCAGG+AGG	0.624977	1:-17720908	None:intergenic
GGCTACTCATGACAACAGAA+TGG	0.634259	1:-17720850	None:intergenic
GAATGGAAACCGGACCAGGA+GGG	0.634490	1:-17720907	None:intergenic
CTGATGGCATCTCTATTGGA+GGG	0.634505	1:-17721027	None:intergenic
CAGCGTCAGCAACACTCCAA+AGG	0.635368	1:+17721411	MsaT001278.1:CDS
GAGTCAGAGCCATGCCACCA+TGG	0.644309	1:+17720816	MsaT001278.1:CDS
TGATAGACCACGGAATGACA+AGG	0.652628	1:+17720524	MsaT001278.1:CDS
TTGGCATTGGCATAGGAACG+GGG	0.655443	1:-17720883	None:intergenic
ATGTAGTGTGTCTCCAGATG+TGG	0.671060	1:+17721141	MsaT001278.1:CDS
ATGCAGATCCTGATAGACCA+CGG	0.688242	1:+17720514	MsaT001278.1:intron
TGGTCAATTGCAGTCCATGG+TGG	0.700069	1:-17720830	None:intergenic
TGACCGTGAGAAAATCAGGA+GGG	0.711741	1:+17719695	MsaT001278.1:CDS
CTGACCGTGAGAAAATCAGG+AGG	0.717963	1:+17719694	MsaT001278.1:CDS
GAAAACACCATCCCTTACTG+CGG	0.761554	1:+17719489	MsaT001278.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	17719445	17721441	17719445	ID=MsaG001278
Chr1	mRNA	17719445	17721441	17719445	ID=MsaT001278.1;Parent=MsaG001278
Chr1	exon	17719445	17719560	17719445	ID=MsaT001278.1.exon1;Parent=MsaT001278.1
Chr1	CDS	17719445	17719560	17719445	ID=cds.MsaT001278.1;Parent=MsaT001278.1
Chr1	exon	17719641	17719759	17719641	ID=MsaT001278.1.exon2;Parent=MsaT001278.1
Chr1	CDS	17719641	17719759	17719641	ID=cds.MsaT001278.1;Parent=MsaT001278.1
Chr1	exon	17720520	17720647	17720520	ID=MsaT001278.1.exon3;Parent=MsaT001278.1
Chr1	CDS	17720520	17720647	17720520	ID=cds.MsaT001278.1;Parent=MsaT001278.1
Chr1	exon	17720731	17721207	17720731	ID=MsaT001278.1.exon4;Parent=MsaT001278.1
Chr1	CDS	17720731	17721207	17720731	ID=cds.MsaT001278.1;Parent=MsaT001278.1
Chr1	exon	17721295	17721441	17721295	ID=MsaT001278.1.exon5;Parent=MsaT001278.1
Chr1	CDS	17721295	17721441	17721295	ID=cds.MsaT001278.1;Parent=MsaT001278.1

Gene Sequence

>MsaT001278.1

ATGATCAATCAATGGAACCCACCGCCTCCGCCGCTAAACACCTCGAAAACACCATCCCTTACTGCGGCAGAAGAATCACCTCCGCTGCCCATCACCAATCGTAAAGATATTGTCAGAGAGAAGAGTGAGATGGAACCAAGTGTTGTTGTTGCTAGAAAAGTTCAGAAGGCTGACCGTGAGAAAATCAGGAGGGATCGTTTAAATGATCATTTTCATCAATTGGGAAACGTAATAGATCCTGATAGACCACGGAATGACAAGGCAACCATCATCACAGAGACAATTCAAGTGCTAAAGGACATAACATCTGAAGTTGATAGACTGAAAACAGAGCATAAATCACTTTCTGAGGAGTCACATGAACTAATACAAGAAAAGAATGAACTCCGAGAAGAGAAAGCGTCTTTAAAATCCGATATAGAAAATCTTAATTCTCAGTACCAGCAGAGAGTCAGAGCCATGCCACCATGGACTGCAATTGACCATTCTGTTGTCATGAGTAGCCCTTATACGTACCCCGTTCCTATGCCAATGCCAATCCCTCCTGGTCCGGTTTCCATTCACCCACCTATGCAACCTTTTCCTTACTATGGAAACCAAAATCCTGGTCATATTCCAAGTCTATCCTCAATGTATATTCCATTCTCGGCTCCAGCTATCCCTCCAATAGAGATGCCATCAGCTCAGTATCCTTCTACATCCCACGTGTTTAGTCGAAAAGAGTCTCGAAGCAAGTCACCAGGTCATAGAAGAAGACCTAGTGATGCAGAAAGATGTAGTGTGTCTCCAGATGTGGCAACAGAGCTTGAGCTTAAGATGCCTGGATCATCAACACAACAGGATTGCACATCTAGAGGAAAAAAGGCAAAGCATTCGGTGATGAGTGATAGAATCATCATAGATGAGAGTGCTTCGAGCCAGTATTCTGCATCTCAGGGACTTCAAGATAGCTCCAACAGCGTCAGCAACACTCCAAAGGCTAGTTAA

Protein sequence

>MsaT001278.1

MINQWNPPPPPLNTSKTPSLTAAEESPPLPITNRKDIVREKSEMEPSVVVARKVQKADREKIRRDRLNDHFHQLGNVIDPDRPRNDKATIITETIQVLKDITSEVDRLKTEHKSLSEESHELIQEKNELREEKASLKSDIENLNSQYQQRVRAMPPWTAIDHSVVMSSPYTYPVPMPMPIPPGPVSIHPPMQPFPYYGNQNPGHIPSLSSMYIPFSAPAIPPIEMPSAQYPSTSHVFSRKESRSKSPGHRRRPSDAERCSVSPDVATELELKMPGSSTQQDCTSRGKKAKHSVMSDRIIIDESASSQYSASQGLQDSSNSVSNTPKAS*