Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG001413 | GAU20275.1 | 62.613 | 222 | 65 | 5 | 1 | 221 | 1 | 205 | 6.55e-87 | 267 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG001413 | sp|Q8GYC1|IDD4_ARATH | 78.146 | 151 | 31 | 1 | 1 | 151 | 78 | 226 | 1.48e-83 | 260 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG001413 | tr|A0A2Z6LP87|A0A2Z6LP87_TRISU | 62.613 | 222 | 65 | 5 | 1 | 221 | 1 | 205 | 3.13e-87 | 267 |
Gene ID | Type | Classification |
---|---|---|
MsaG001413 | TF | C2H2 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG000519 | MsaG001413 | 0.809382 | 3.320631e-50 | 5.586516e-48 |
MsaG001156 | MsaG001413 | 0.814905 | 2.100311e-51 | 4.050326e-49 |
MsaG001179 | MsaG001413 | 0.816655 | 8.589163e-52 | 1.731631e-49 |
MsaG001413 | MsaG001414 | 0.904456 | 2.830836e-79 | 1.887424e-75 |
MsaG001413 | MsaG001415 | 0.929893 | 9.841740e-93 | 3.972918e-88 |
MsaG001413 | MsaG002016 | 0.819553 | 1.913070e-52 | 4.157862e-50 |
MsaG001413 | MsaG003276 | 0.807877 | 6.935652e-50 | 1.125394e-47 |
MsaG001413 | MsaG003288 | 0.809063 | 3.882930e-50 | 6.482852e-48 |
MsaG001413 | MsaG003374 | 0.806018 | 1.707642e-49 | 2.651080e-47 |
MsaG001413 | MsaG005150 | 0.809369 | 3.341340e-50 | 5.619680e-48 |
MsaG001413 | MsaG005205 | 0.839124 | 3.523190e-57 | 1.338129e-54 |
MsaG001413 | MsaG005648 | 0.800996 | 1.856221e-48 | 2.566754e-46 |
MsaG001413 | MsaG006074 | 0.824222 | 1.605988e-53 | 3.954875e-51 |
MsaG001413 | MsaG006084 | 0.818785 | 2.854845e-52 | 6.081171e-50 |
MsaG001413 | MsaG006533 | 0.813001 | 5.495481e-51 | 1.010357e-48 |
MsaG001413 | MsaG006601 | 0.815972 | 1.218669e-51 | 2.414550e-49 |
MsaG001413 | MsaG007067 | 0.807874 | 6.944391e-50 | 1.126739e-47 |
MsaG001413 | MsaG009346 | 0.808811 | 4.394898e-50 | 7.293015e-48 |
MsaG001413 | MsaG010900 | 0.800581 | 2.254097e-48 | 3.087990e-46 |
MsaG001413 | MsaG011115 | 0.831236 | 3.374738e-55 | 1.011877e-52 |
MsaG001413 | MsaG011505 | 0.806862 | 1.135555e-49 | 1.798481e-47 |
MsaG001413 | MsaG012273 | 0.892034 | 5.106401e-74 | 1.675177e-70 |
MsaG001413 | MsaG012341 | 0.821356 | 7.409247e-53 | 1.689086e-50 |
MsaG001413 | MsaG012426 | 0.823958 | 1.851498e-53 | 4.526825e-51 |
MsaG001413 | MsaG012581 | 0.845383 | 7.888100e-59 | 3.660488e-56 |
MsaG001413 | MsaG014821 | 0.809673 | 2.877218e-50 | 4.874771e-48 |
MsaG001413 | MsaG017883 | 0.825989 | 6.170207e-54 | 1.595214e-51 |
MsaG001413 | MsaG017976 | 0.843495 | 2.524523e-58 | 1.101409e-55 |
MsaG001413 | MsaG018183 | 0.817667 | 5.097863e-52 | 1.054912e-49 |
MsaG001413 | MsaG018343 | 0.841276 | 9.718288e-58 | 3.949377e-55 |
MsaG001413 | MsaG018452 | 0.840495 | 1.554186e-57 | 6.162199e-55 |
MsaG001413 | MsaG020991 | 0.848789 | 9.288693e-60 | 4.830299e-57 |
MsaG001413 | MsaG021668 | 0.831049 | 3.749724e-55 | 1.118295e-52 |
MsaG001413 | MsaG021896 | 0.807483 | 8.403896e-50 | 1.350728e-47 |
MsaG001413 | MsaG022058 | 0.858095 | 2.033978e-62 | 1.471821e-59 |
MsaG001413 | MsaG022059 | 0.834834 | 4.339975e-56 | 1.446551e-53 |
MsaG001413 | MsaG023408 | 0.810934 | 1.542631e-50 | 2.695039e-48 |
MsaG001413 | MsaG023744 | 0.804493 | 3.550070e-49 | 5.319214e-47 |
MsaG001413 | MsaG023683 | 0.801974 | 1.172624e-48 | 1.657899e-46 |
MsaG001413 | MsaG023917 | 0.808029 | 6.440906e-50 | 1.048919e-47 |
MsaG001413 | MsaG023835 | 0.801437 | 1.510102e-48 | 2.109096e-46 |
MsaG001413 | MsaG023837 | 0.827634 | 2.507089e-54 | 6.785894e-52 |
MsaG001413 | MsaG023856 | 0.821462 | 7.006063e-53 | 1.601644e-50 |
MsaG001413 | MsaG024025 | 0.805653 | 2.035956e-49 | 3.133899e-47 |
MsaG001413 | MsaG024026 | 0.832448 | 1.700665e-55 | 5.282642e-53 |
MsaG001413 | MsaG026777 | 0.807123 | 1.000701e-49 | 1.594698e-47 |
MsaG001413 | MsaG027371 | 0.807649 | 7.748726e-50 | 1.250395e-47 |
MsaG001413 | MsaG029281 | 0.810365 | 2.044400e-50 | 3.522573e-48 |
MsaG001413 | MsaG029388 | 0.814469 | 2.619922e-51 | 4.997242e-49 |
MsaG001413 | MsaG030840 | 0.803930 | 4.644444e-49 | 6.868742e-47 |
MsaG001413 | MsaG032386 | 0.845091 | 9.453089e-59 | 4.344651e-56 |
MsaG001413 | MsaG032477 | 0.830309 | 5.679322e-55 | 1.658199e-52 |
MsaG001413 | MsaG032998 | 0.802834 | 7.813319e-49 | 1.126587e-46 |
MsaG001413 | MsaG033759 | 0.810300 | 2.111331e-50 | 3.632007e-48 |
MsaG001413 | MsaG033782 | 0.822649 | 3.729334e-53 | 8.800857e-51 |
MsaG001413 | MsaG034658 | 0.806049 | 1.682160e-49 | 2.613552e-47 |
MsaG001413 | MsaG037937 | 0.853705 | 3.855699e-61 | 2.378371e-58 |
MsaG001413 | MsaG040775 | 0.801781 | 1.284356e-48 | 1.807871e-46 |
MsaG001413 | MsaG042086 | 0.823390 | 2.510355e-53 | 6.044260e-51 |
MsaG001413 | MsaG044131 | 0.800349 | 2.512666e-48 | 3.424123e-46 |
MsaG001413 | MsaG044352 | 0.802798 | 7.950313e-49 | 1.145383e-46 |
MsaG001413 | MsaG046307 | 0.816084 | 1.150604e-51 | 2.286169e-49 |
MsaG001413 | MsaG046512 | 0.823011 | 3.074939e-53 | 7.327965e-51 |
MsaG001413 | MsaG002456 | 0.820574 | 1.119326e-52 | 2.499484e-50 |
MsaG001413 | MsaG009542 | 0.805142 | 2.602784e-49 | 3.959025e-47 |
MsaG001413 | MsaG014346 | 0.803085 | 6.938590e-49 | 1.006292e-46 |
MsaG001413 | MsaG013064 | 0.832503 | 1.647547e-55 | 5.126019e-53 |
MsaG001413 | MsaG024399 | 0.807645 | 7.764781e-50 | 1.252854e-47 |
MsaG001413 | MsaG028544 | 0.810926 | 1.548962e-50 | 2.705541e-48 |
MsaG001413 | MsaG032859 | 0.807777 | 7.283756e-50 | 1.179002e-47 |
MsaG001413 | MsaG034036 | 0.803903 | 4.704622e-49 | 6.953250e-47 |
MsaG001413 | MsaG033509 | 0.827926 | 2.134587e-54 | 5.825330e-52 |
MsaG001413 | MsaG030523 | 0.820727 | 1.032968e-52 | 2.315870e-50 |
MsaG001413 | MsaG038716 | 0.826245 | 5.366028e-54 | 1.397158e-51 |
MsaG001413 | MsaG037163 | 0.819571 | 1.894355e-52 | 4.119206e-50 |
MsaG001413 | MsaG035298 | 0.809959 | 2.499030e-50 | 4.263379e-48 |
MsaG001413 | MsaG037526 | 0.816132 | 1.123040e-51 | 2.234146e-49 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG001413 | MtrunA17_Chr1g0162971 | 79.012 | 162 | 32 | 1 | 1 | 162 | 65 | 224 | 9.04e-91 | 273 |
MsaG001413 | MtrunA17_Chr1g0162971 | 83.333 | 120 | 20 | 0 | 105 | 224 | 326 | 445 | 7.17e-45 | 155 |
MsaG001413 | MtrunA17_Chr1g0163001 | 95.082 | 122 | 6 | 0 | 1 | 122 | 67 | 188 | 2.48e-85 | 262 |
MsaG001413 | MtrunA17_Chr1g0199101 | 92.623 | 122 | 9 | 0 | 1 | 122 | 71 | 192 | 1.30e-84 | 261 |
MsaG001413 | MtrunA17_Chr1g0210821 | 91.803 | 122 | 10 | 0 | 1 | 122 | 68 | 189 | 5.58e-84 | 260 |
MsaG001413 | MtrunA17_Chr7g0263941 | 84.426 | 122 | 19 | 0 | 1 | 122 | 58 | 179 | 9.75e-79 | 241 |
MsaG001413 | MtrunA17_Chr8g0342421 | 84.426 | 122 | 19 | 0 | 1 | 122 | 86 | 207 | 7.60e-78 | 243 |
MsaG001413 | MtrunA17_Chr2g0330171 | 83.607 | 122 | 20 | 0 | 1 | 122 | 70 | 191 | 8.06e-78 | 241 |
MsaG001413 | MtrunA17_Chr4g0040571 | 69.375 | 160 | 42 | 2 | 1 | 160 | 63 | 215 | 5.79e-77 | 240 |
MsaG001413 | MtrunA17_Chr1g0181381 | 72.549 | 153 | 36 | 3 | 1 | 152 | 62 | 209 | 6.73e-77 | 239 |
MsaG001413 | MtrunA17_Chr8g0373541 | 81.967 | 122 | 22 | 0 | 1 | 122 | 57 | 178 | 1.06e-76 | 239 |
MsaG001413 | MtrunA17_Chr1g0185121 | 66.258 | 163 | 52 | 2 | 1 | 162 | 64 | 224 | 1.13e-75 | 235 |
MsaG001413 | MtrunA17_Chr7g0268961 | 80.328 | 122 | 24 | 0 | 1 | 122 | 46 | 167 | 2.07e-75 | 235 |
MsaG001413 | MtrunA17_Chr2g0324991 | 83.193 | 119 | 20 | 0 | 1 | 119 | 16 | 134 | 3.61e-75 | 224 |
MsaG001413 | MtrunA17_Chr1g0151351 | 81.301 | 123 | 22 | 1 | 1 | 122 | 65 | 187 | 7.75e-75 | 233 |
MsaG001413 | MtrunA17_Chr4g0029521 | 82.114 | 123 | 21 | 1 | 1 | 122 | 62 | 184 | 1.07e-74 | 234 |
MsaG001413 | MtrunA17_Chr1g0191991 | 79.508 | 122 | 25 | 0 | 1 | 122 | 87 | 208 | 3.21e-74 | 233 |
MsaG001413 | MtrunA17_Chr2g0326381 | 57.895 | 190 | 70 | 4 | 1 | 189 | 56 | 236 | 1.07e-73 | 229 |
MsaG001413 | MtrunA17_Chr3g0141431 | 73.950 | 119 | 30 | 1 | 1 | 118 | 46 | 164 | 6.84e-67 | 211 |
MsaG001413 | MtrunA17_Chr6g0479921 | 60.504 | 119 | 46 | 1 | 1 | 118 | 53 | 171 | 5.76e-53 | 177 |
MsaG001413 | MtrunA17_Chr8g0375521 | 60.000 | 120 | 46 | 2 | 1 | 118 | 51 | 170 | 9.86e-52 | 172 |
MsaG001413 | MtrunA17_Chr8g0352011 | 37.692 | 130 | 72 | 4 | 1 | 122 | 174 | 302 | 9.57e-19 | 83.2 |
MsaG001413 | MtrunA17_Chr1g0200421 | 36.154 | 130 | 71 | 4 | 1 | 118 | 246 | 375 | 1.13e-18 | 84.0 |
MsaG001413 | MtrunA17_Chr7g0258011 | 36.154 | 130 | 74 | 4 | 1 | 122 | 184 | 312 | 4.70e-18 | 81.3 |
MsaG001413 | MtrunA17_Chr5g0422571 | 35.115 | 131 | 75 | 3 | 1 | 122 | 109 | 238 | 7.52e-18 | 80.1 |
MsaG001413 | MtrunA17_Chr1g0198651 | 35.821 | 134 | 72 | 4 | 1 | 122 | 110 | 241 | 1.82e-17 | 79.3 |
MsaG001413 | MtrunA17_Chr1g0173841 | 35.385 | 130 | 75 | 4 | 1 | 122 | 223 | 351 | 3.17e-17 | 79.3 |
MsaG001413 | MtrunA17_Chr4g0053341 | 35.385 | 130 | 75 | 3 | 1 | 122 | 82 | 210 | 4.05e-17 | 77.4 |
MsaG001413 | MtrunA17_Chr2g0321291 | 37.008 | 127 | 69 | 4 | 5 | 122 | 145 | 269 | 4.31e-17 | 78.2 |
MsaG001413 | MtrunA17_Chr2g0328921 | 34.615 | 130 | 76 | 4 | 1 | 122 | 146 | 274 | 9.08e-17 | 77.4 |
MsaG001413 | MtrunA17_Chr2g0320341 | 36.800 | 125 | 65 | 4 | 8 | 118 | 246 | 370 | 9.32e-17 | 78.2 |
MsaG001413 | MtrunA17_Chr4g0026521 | 35.433 | 127 | 71 | 4 | 5 | 122 | 130 | 254 | 2.47e-16 | 76.3 |
MsaG001413 | MtrunA17_Chr3g0123941 | 34.127 | 126 | 75 | 3 | 1 | 118 | 132 | 257 | 5.45e-15 | 72.8 |
MsaG001413 | MtrunA17_Chr8g0382121 | 33.333 | 129 | 75 | 5 | 1 | 118 | 120 | 248 | 4.38e-14 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG001413 | AT2G02080.6 | 78.146 | 151 | 31 | 1 | 1 | 151 | 1 | 149 | 3.58e-85 | 259 |
MsaG001413 | AT2G02080.2 | 78.146 | 151 | 31 | 1 | 1 | 151 | 1 | 149 | 3.58e-85 | 259 |
MsaG001413 | AT2G02080.1 | 78.146 | 151 | 31 | 1 | 1 | 151 | 78 | 226 | 1.51e-84 | 260 |
MsaG001413 | AT2G02080.4 | 78.146 | 151 | 31 | 1 | 1 | 151 | 78 | 226 | 1.51e-84 | 260 |
MsaG001413 | AT2G02080.5 | 78.146 | 151 | 31 | 1 | 1 | 151 | 78 | 226 | 1.51e-84 | 260 |
MsaG001413 | AT2G02080.3 | 78.146 | 151 | 31 | 1 | 1 | 151 | 78 | 226 | 1.51e-84 | 260 |
MsaG001413 | AT1G14580.1 | 77.703 | 148 | 31 | 1 | 1 | 148 | 77 | 222 | 7.47e-83 | 254 |
MsaG001413 | AT1G14580.2 | 77.703 | 148 | 31 | 1 | 1 | 148 | 77 | 222 | 7.47e-83 | 254 |
MsaG001413 | AT1G14580.3 | 77.703 | 148 | 31 | 1 | 1 | 148 | 91 | 236 | 1.14e-82 | 254 |
MsaG001413 | AT2G02070.2 | 90.984 | 122 | 11 | 0 | 1 | 122 | 76 | 197 | 8.04e-82 | 255 |
MsaG001413 | AT2G02070.1 | 90.984 | 122 | 11 | 0 | 1 | 122 | 76 | 197 | 8.04e-82 | 255 |
MsaG001413 | AT3G50700.1 | 85.246 | 122 | 18 | 0 | 1 | 122 | 58 | 179 | 2.93e-78 | 242 |
MsaG001413 | AT1G55110.3 | 84.553 | 123 | 18 | 1 | 1 | 122 | 87 | 209 | 3.23e-76 | 237 |
MsaG001413 | AT1G55110.1 | 84.553 | 123 | 18 | 1 | 1 | 122 | 87 | 209 | 3.23e-76 | 237 |
MsaG001413 | AT1G55110.2 | 84.553 | 123 | 18 | 1 | 1 | 122 | 87 | 209 | 3.23e-76 | 237 |
MsaG001413 | AT5G66730.1 | 83.607 | 122 | 20 | 0 | 1 | 122 | 56 | 177 | 9.06e-76 | 237 |
MsaG001413 | AT3G13810.6 | 85.366 | 123 | 17 | 1 | 1 | 122 | 75 | 197 | 2.85e-74 | 233 |
MsaG001413 | AT5G03150.1 | 68.263 | 167 | 47 | 3 | 1 | 166 | 77 | 238 | 3.44e-74 | 233 |
MsaG001413 | AT3G13810.4 | 85.366 | 123 | 17 | 1 | 1 | 122 | 94 | 216 | 3.52e-74 | 233 |
MsaG001413 | AT3G13810.1 | 85.366 | 123 | 17 | 1 | 1 | 122 | 94 | 216 | 3.52e-74 | 233 |
MsaG001413 | AT3G45260.2 | 82.927 | 123 | 20 | 1 | 1 | 122 | 63 | 185 | 3.80e-74 | 231 |
MsaG001413 | AT3G45260.1 | 82.927 | 123 | 20 | 1 | 1 | 122 | 63 | 185 | 3.80e-74 | 231 |
MsaG001413 | AT3G13810.5 | 85.366 | 123 | 17 | 1 | 1 | 122 | 89 | 211 | 3.88e-74 | 233 |
MsaG001413 | AT3G13810.3 | 85.366 | 123 | 17 | 1 | 1 | 122 | 81 | 203 | 4.09e-74 | 233 |
MsaG001413 | AT3G13810.2 | 85.366 | 123 | 17 | 1 | 1 | 122 | 95 | 217 | 4.82e-74 | 233 |
MsaG001413 | AT1G03840.2 | 66.038 | 159 | 52 | 1 | 1 | 159 | 63 | 219 | 4.96e-74 | 233 |
MsaG001413 | AT1G03840.1 | 66.038 | 159 | 52 | 1 | 1 | 159 | 65 | 221 | 5.26e-74 | 233 |
MsaG001413 | AT4G02670.1 | 69.281 | 153 | 44 | 2 | 1 | 152 | 77 | 227 | 1.45e-73 | 228 |
MsaG001413 | AT4G02670.2 | 69.281 | 153 | 44 | 2 | 1 | 152 | 79 | 229 | 1.50e-73 | 229 |
MsaG001413 | AT5G60470.1 | 66.038 | 159 | 51 | 2 | 1 | 158 | 59 | 215 | 1.57e-73 | 230 |
MsaG001413 | AT5G60470.2 | 66.038 | 159 | 51 | 2 | 1 | 158 | 68 | 224 | 2.42e-73 | 229 |
MsaG001413 | AT5G60470.3 | 66.038 | 159 | 51 | 2 | 1 | 158 | 64 | 220 | 2.99e-73 | 229 |
MsaG001413 | AT5G44160.2 | 70.548 | 146 | 41 | 1 | 1 | 146 | 22 | 165 | 8.55e-73 | 227 |
MsaG001413 | AT5G44160.1 | 70.548 | 146 | 41 | 1 | 1 | 146 | 61 | 204 | 1.53e-72 | 228 |
MsaG001413 | AT1G68130.1 | 62.500 | 120 | 43 | 2 | 1 | 118 | 65 | 184 | 5.24e-54 | 179 |
MsaG001413 | AT1G25250.3 | 61.157 | 121 | 44 | 2 | 1 | 118 | 57 | 177 | 1.07e-53 | 177 |
MsaG001413 | AT2G01940.1 | 62.500 | 120 | 43 | 2 | 1 | 118 | 68 | 187 | 1.09e-53 | 178 |
MsaG001413 | AT1G25250.1 | 61.157 | 121 | 44 | 2 | 1 | 118 | 34 | 154 | 1.14e-53 | 176 |
MsaG001413 | AT2G01940.3 | 62.810 | 121 | 42 | 3 | 1 | 119 | 68 | 187 | 1.62e-52 | 175 |
MsaG001413 | AT1G68130.2 | 63.265 | 98 | 34 | 2 | 23 | 118 | 1 | 98 | 2.24e-41 | 144 |
MsaG001413 | AT2G01940.2 | 64.286 | 98 | 33 | 2 | 23 | 118 | 1 | 98 | 5.27e-41 | 143 |
MsaG001413 | AT1G25250.2 | 61.616 | 99 | 35 | 2 | 23 | 118 | 1 | 99 | 7.80e-41 | 141 |
MsaG001413 | AT1G34370.3 | 34.848 | 132 | 72 | 3 | 1 | 118 | 29 | 160 | 1.39e-17 | 79.7 |
MsaG001413 | AT1G34370.2 | 34.848 | 132 | 72 | 3 | 1 | 118 | 239 | 370 | 2.19e-17 | 80.9 |
MsaG001413 | AT1G34370.1 | 34.848 | 132 | 72 | 3 | 1 | 118 | 239 | 370 | 2.19e-17 | 80.9 |
MsaG001413 | AT3G20880.1 | 34.615 | 130 | 76 | 4 | 1 | 122 | 251 | 379 | 3.35e-17 | 79.7 |
MsaG001413 | AT3G57670.1 | 35.385 | 130 | 75 | 4 | 1 | 122 | 212 | 340 | 3.74e-17 | 79.7 |
MsaG001413 | AT1G51220.1 | 33.846 | 130 | 77 | 4 | 1 | 122 | 173 | 301 | 4.30e-17 | 79.0 |
MsaG001413 | AT1G08290.1 | 36.220 | 127 | 71 | 4 | 5 | 122 | 179 | 304 | 1.91e-16 | 77.4 |
MsaG001413 | AT5G22890.1 | 33.333 | 132 | 74 | 3 | 1 | 118 | 212 | 343 | 2.42e-16 | 77.4 |
MsaG001413 | AT1G34790.1 | 36.641 | 131 | 72 | 5 | 1 | 122 | 140 | 268 | 3.34e-16 | 76.3 |
MsaG001413 | AT1G13290.1 | 34.848 | 132 | 75 | 4 | 1 | 122 | 96 | 226 | 4.55e-16 | 75.9 |
Find 44 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACAAATAAACCTTTCTCTT+TGG | 0.255380 | 1:-19759431 | None:intergenic |
GTATGTGAAGTGTGCCAAAA+AGG | 0.353724 | 1:+19759326 | MsaT001413.1:CDS |
TCTGCAGCAACAAAGGTTAA+TGG | 0.357357 | 1:+19762318 | MsaT001413.1:CDS |
GCAGAGAATAATGGAAATAT+TGG | 0.362372 | 1:+19762447 | MsaT001413.1:CDS |
AGATAGGGCTTGCGCTTGTT+TGG | 0.373788 | 1:-19762173 | None:intergenic |
TGGTGAACACATGTTGGTTC+TGG | 0.406411 | 1:-19759455 | None:intergenic |
AACTTGGAAGCAGAGAATAA+TGG | 0.409292 | 1:+19762438 | MsaT001413.1:CDS |
TCTTCAATACTAAGAAGCTT+TGG | 0.417560 | 1:+19762282 | MsaT001413.1:CDS |
TATTGAAGAAGAAGTATTGT+TGG | 0.444187 | 1:-19762268 | None:intergenic |
AGTATGCTGTTCAATCTGAT+TGG | 0.446846 | 1:+19759576 | MsaT001413.1:CDS |
TTCTAAGACTTGTGGTACTA+AGG | 0.456129 | 1:+19759607 | MsaT001413.1:CDS |
GCTGACATGTGAGGAGAGAT+AGG | 0.463590 | 1:-19762189 | None:intergenic |
GTGTTCACCATGACCCTTCA+AGG | 0.470912 | 1:+19759468 | MsaT001413.1:CDS |
AGAAGTATTGTTGGTGGTGG+TGG | 0.473552 | 1:-19762259 | None:intergenic |
AATGGAAATATTGGTGGTGG+AGG | 0.493890 | 1:+19762456 | MsaT001413.1:CDS |
GAAGAGGACACAATTTGCCT+TGG | 0.500777 | 1:+19759381 | MsaT001413.1:CDS |
AATAATGGAAATATTGGTGG+TGG | 0.516109 | 1:+19762453 | MsaT001413.1:CDS |
TAACAAAGAGCCAAAGAGAA+AGG | 0.517289 | 1:+19759421 | MsaT001413.1:CDS |
AGGGCACTTGGTGATCTCAC+TGG | 0.527339 | 1:+19759488 | MsaT001413.1:CDS |
CATGACCCTTCAAGGGCACT+TGG | 0.527782 | 1:+19759476 | MsaT001413.1:CDS |
AGAAACATGAATGGAGGAGT+TGG | 0.532530 | 1:+19762393 | MsaT001413.1:CDS |
GAGAATAATGGAAATATTGG+TGG | 0.544890 | 1:+19762450 | MsaT001413.1:CDS |
AAGGTTAATGGTGGTGGTGA+TGG | 0.546808 | 1:+19762330 | MsaT001413.1:CDS |
ATTAACCTTTGTTGCTGCAG+AGG | 0.549390 | 1:-19762316 | None:intergenic |
TTCTTCCTCTGCAGCAACAA+AGG | 0.557640 | 1:+19762311 | MsaT001413.1:CDS |
AGATCACCAAGTGCCCTTGA+AGG | 0.560455 | 1:-19759482 | None:intergenic |
ACTGTGGTACTCTCTTCTCC+AGG | 0.561759 | 1:+19759642 | MsaT001413.1:CDS |
ATAGTTATGAGAAACATGAA+TGG | 0.565754 | 1:+19762384 | MsaT001413.1:CDS |
ATGGAAATATTGGTGGTGGA+GGG | 0.575851 | 1:+19762457 | MsaT001413.1:CDS |
CAAGTGCCCTTGAAGGGTCA+TGG | 0.580343 | 1:-19759475 | None:intergenic |
TGAAGAAGAAGTATTGTTGG+TGG | 0.581655 | 1:-19762265 | None:intergenic |
GTTATGAGAAACATGAATGG+AGG | 0.584520 | 1:+19762387 | MsaT001413.1:CDS |
GATCACCAAGTGCCCTTGAA+GGG | 0.585984 | 1:-19759481 | None:intergenic |
AAGTCAACGTAATTTCAACT+TGG | 0.588729 | 1:+19762422 | MsaT001413.1:CDS |
GCAACAAAGGTTAATGGTGG+TGG | 0.590964 | 1:+19762324 | MsaT001413.1:CDS |
AGAAGAAGTATTGTTGGTGG+TGG | 0.609899 | 1:-19762262 | None:intergenic |
CTGACATGTGAGGAGAGATA+GGG | 0.611438 | 1:-19762188 | None:intergenic |
AAAGCTCATTCTAAGACTTG+TGG | 0.613886 | 1:+19759599 | MsaT001413.1:CDS |
TGTTCACCATGACCCTTCAA+GGG | 0.614167 | 1:+19759469 | MsaT001413.1:CDS |
AATTTACAACTACATAGAAG+AGG | 0.622328 | 1:+19759365 | MsaT001413.1:CDS |
GCAGCAACAAAGGTTAATGG+TGG | 0.676561 | 1:+19762321 | MsaT001413.1:CDS |
GGGTCATGGTGAACACATGT+TGG | 0.698022 | 1:-19759461 | None:intergenic |
AAAGCTGTTGCTGACATGTG+AGG | 0.698667 | 1:-19762198 | None:intergenic |
AAGGAGTATAGATGTGACTG+TGG | 0.709247 | 1:+19759626 | MsaT001413.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 19759308 | 19762491 | 19759308 | ID=MsaG001413 |
Chr1 | mRNA | 19759308 | 19762491 | 19759308 | ID=MsaT001413.1;Parent=MsaG001413 |
Chr1 | exon | 19759308 | 19759663 | 19759308 | ID=MsaT001413.1.exon1;Parent=MsaT001413.1 |
Chr1 | CDS | 19759308 | 19759663 | 19759308 | ID=cds.MsaT001413.1;Parent=MsaT001413.1 |
Chr1 | exon | 19762173 | 19762491 | 19762173 | ID=MsaT001413.1.exon2;Parent=MsaT001413.1 |
Chr1 | CDS | 19762173 | 19762491 | 19762173 | ID=cds.MsaT001413.1;Parent=MsaT001413.1 |
Gene Sequence |
Protein sequence |