AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG001439

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG001439 MtrunA17_Chr1g0163251 84.431 334 43 2 259 583 8 341 0.0 560
MsaG001439 MtrunA17_Chr1g0163251 54.225 284 101 5 1 265 1 274 9.03e-92 290
MsaG001439 MtrunA17_Chr1g0163181 54.338 438 160 7 259 671 8 430 5.85e-155 454
MsaG001439 MtrunA17_Chr1g0163181 53.125 288 97 6 1 258 1 280 2.55e-89 285
MsaG001439 MtrunA17_Chr1g0163181 57.534 73 16 2 209 267 354 425 8.82e-15 77.0
MsaG001439 MtrunA17_Chr1g0163201 52.029 419 140 5 271 671 18 393 1.95e-136 405
MsaG001439 MtrunA17_Chr1g0163201 49.492 295 98 8 20 278 18 297 1.66e-75 248
MsaG001439 MtrunA17_Chr1g0163261 50.000 282 132 2 265 542 18 294 3.97e-86 272
MsaG001439 MtrunA17_Chr1g0163261 40.345 290 135 6 1 265 1 277 2.83e-59 201
MsaG001439 MtrunA17_Chr1g0163241 82.927 164 20 2 1 164 7 162 1.12e-85 266
MsaG001439 MtrunA17_Chr1g0163241 67.550 151 39 5 262 407 17 162 3.31e-55 186
MsaG001439 MtrunA17_Chr1g0163231 50.549 273 120 7 265 532 18 280 8.20e-82 261
MsaG001439 MtrunA17_Chr1g0163231 44.286 280 114 9 1 255 1 263 2.73e-63 212
MsaG001439 MtrunA17_Chr1g0171611 51.838 272 106 6 265 532 18 268 3.69e-81 259
MsaG001439 MtrunA17_Chr1g0171611 41.786 280 109 7 1 255 1 251 2.65e-56 193
MsaG001439 MtrunA17_Chr1g0163151 45.736 258 103 2 414 671 2 222 7.43e-71 229
MsaG001439 MtrunA17_Chr1g0163151 57.746 71 16 1 209 265 146 216 9.87e-17 79.7
MsaG001439 MtrunA17_Chr1g0163191 69.182 159 41 2 1 152 1 158 5.30e-61 201
MsaG001439 MtrunA17_Chr1g0163191 60.927 151 45 1 259 395 8 158 1.47e-52 178
MsaG001439 MtrunA17_Chr1g0163111 42.969 256 117 6 417 671 2 229 3.81e-60 201
MsaG001439 MtrunA17_Chr1g0163111 52.778 72 20 1 208 265 152 223 3.65e-15 75.5
MsaG001439 MtrunA17_Chr6g0476171 38.519 270 130 7 408 670 5 245 8.08e-43 155
MsaG001439 MtrunA17_Chr1g0162151 37.109 256 110 4 414 669 2 206 1.13e-41 150
MsaG001439 MtrunA17_Chr1g0163091 50.376 133 65 1 415 547 3 134 2.84e-37 136
MsaG001439 MtrunA17_Chr8g0390841 26.327 490 275 18 254 669 39 516 6.67e-36 142
MsaG001439 MtrunA17_Chr8g0390841 26.241 282 160 7 14 258 48 318 7.43e-22 99.8
MsaG001439 MtrunA17_Chr1g0163131 32.155 283 155 10 14 266 27 302 1.68e-34 133
MsaG001439 MtrunA17_Chr1g0163131 30.241 291 167 10 265 530 27 306 6.42e-30 120
MsaG001439 MtrunA17_Chr1g0163131 51.948 77 33 2 596 670 232 306 1.72e-15 77.8
MsaG001439 MtrunA17_Chr1g0208771 26.030 461 263 17 271 669 12 456 1.51e-33 134
MsaG001439 MtrunA17_Chr1g0208771 26.523 279 154 10 20 259 12 278 2.12e-19 91.7
MsaG001439 MtrunA17_Chr7g0233561 30.868 311 176 9 247 529 11 310 6.50e-33 129
MsaG001439 MtrunA17_Chr7g0233561 27.835 291 166 12 9 261 18 302 1.04e-18 87.8
MsaG001439 MtrunA17_Chr7g0233521 32.975 279 163 10 272 537 2 269 6.78e-30 119
MsaG001439 MtrunA17_Chr7g0233521 26.937 271 145 9 21 259 2 251 1.76e-18 86.3
MsaG001439 MtrunA17_Chr1g0163101 41.727 139 75 2 265 398 26 163 2.38e-28 112
MsaG001439 MtrunA17_Chr1g0163101 40.397 151 84 3 14 164 26 170 3.52e-25 103
MsaG001439 MtrunA17_Chr7g0233541 30.450 289 174 7 272 537 2 286 1.04e-27 113
MsaG001439 MtrunA17_Chr7g0233541 27.682 289 135 11 21 258 2 267 9.42e-19 87.4
MsaG001439 MtrunA17_Chr3g0103181 28.938 273 181 6 262 529 14 278 1.22e-27 113
MsaG001439 MtrunA17_Chr3g0103181 25.632 277 174 4 9 266 12 275 1.29e-22 98.6
MsaG001439 MtrunA17_Chr1g0163221 30.345 290 187 9 254 534 11 294 2.93e-27 114
MsaG001439 MtrunA17_Chr1g0163221 26.966 267 162 8 14 257 20 276 3.95e-15 77.4
MsaG001439 MtrunA17_Chr3g0131891 31.228 285 165 9 265 529 28 301 3.59e-27 113
MsaG001439 MtrunA17_Chr3g0131891 28.082 292 150 9 14 266 28 298 1.23e-21 96.7
MsaG001439 MtrunA17_Chr4g0067431 30.070 286 169 11 262 519 17 299 6.16e-26 109
MsaG001439 MtrunA17_Chr4g0067431 26.923 286 169 8 9 257 15 297 3.97e-18 86.3
MsaG001439 MtrunA17_Chr6g0476181 43.571 140 76 3 272 411 2 138 7.16e-26 104
MsaG001439 MtrunA17_Chr6g0476181 37.908 153 85 3 21 164 2 153 6.32e-23 95.9
MsaG001439 MtrunA17_Chr3g0103171 27.407 270 175 7 271 529 5 264 1.15e-25 107
MsaG001439 MtrunA17_Chr3g0103171 26.937 271 160 7 20 266 5 261 1.07e-23 101
MsaG001439 MtrunA17_Chr1g0162161 41.096 146 76 3 272 410 4 146 1.33e-25 103
MsaG001439 MtrunA17_Chr1g0162161 38.889 144 84 3 21 164 4 143 4.56e-24 99.4
MsaG001439 MtrunA17_Chr1g0163071 26.733 303 184 8 272 542 2 298 2.46e-24 104
MsaG001439 MtrunA17_Chr1g0163071 26.950 282 169 10 21 266 2 282 1.42e-18 87.0
MsaG001439 MtrunA17_Chr1g0163121 41.844 141 71 3 270 408 9 140 2.64e-24 99.4
MsaG001439 MtrunA17_Chr1g0163121 47.126 87 45 1 19 105 9 94 7.45e-20 86.7
MsaG001439 MtrunA17_Chr1g0163081 46.296 108 55 2 272 377 6 112 9.13e-24 97.8
MsaG001439 MtrunA17_Chr1g0163081 40.171 117 68 2 21 137 6 120 1.67e-20 88.6
MsaG001439 MtrunA17_Chr7g0233531 29.197 274 180 7 272 537 2 269 3.77e-23 100
MsaG001439 MtrunA17_Chr7g0233531 28.137 263 152 7 21 259 2 251 3.14e-17 82.8
MsaG001439 MtrunA17_Chr3g0077411 23.345 574 304 22 9 529 25 515 1.50e-22 102
MsaG001439 MtrunA17_Chr1g0163141 46.000 100 53 1 268 367 7 105 4.93e-22 94.4
MsaG001439 MtrunA17_Chr1g0163141 38.129 139 73 3 17 147 7 140 1.24e-21 93.2
MsaG001439 MtrunA17_Chr3g0103151 41.007 139 66 5 262 392 14 144 6.14e-22 93.2
MsaG001439 MtrunA17_Chr3g0103151 35.833 120 72 3 9 123 12 131 6.40e-17 78.6
MsaG001439 MtrunA17_Chr7g0233571 50.000 108 48 3 248 352 4 108 1.01e-21 94.4
MsaG001439 MtrunA17_Chr7g0233571 46.667 90 46 1 14 101 19 108 5.63e-18 83.6
MsaG001439 MtrunA17_Chr3g0103191 30.396 227 134 6 262 475 14 229 1.12e-20 92.0
MsaG001439 MtrunA17_Chr3g0103191 30.000 240 134 9 9 233 12 232 9.44e-20 89.4
MsaG001439 MtrunA17_Chr5g0419201 41.584 101 55 2 254 352 16 114 1.59e-19 87.0
MsaG001439 MtrunA17_Chr5g0419201 35.156 128 78 2 14 136 25 152 7.20e-19 85.1
MsaG001439 MtrunA17_Chr6g0467351 27.442 215 137 6 254 452 15 226 7.14e-18 83.6
MsaG001439 MtrunA17_Chr6g0467351 36.792 106 64 2 13 115 23 128 9.60e-15 74.3
MsaG001439 MtrunA17_Chr1g0163161 39.850 133 68 5 284 408 1 129 1.18e-16 77.0
MsaG001439 MtrunA17_Chr1g0163161 41.667 96 53 2 33 128 1 93 1.22e-15 74.3
MsaG001439 MtrunA17_Chr1g0154111 23.558 416 232 15 3 339 30 438 2.52e-15 79.7
MsaG001439 MtrunA17_Chr4g0033961 29.282 181 95 5 7 154 4 184 6.95e-13 71.2
MsaG001439 MtrunA17_Chr5g0419211 36.364 99 61 2 450 547 8 105 7.82e-13 65.5
MsaG001439 MtrunA17_Chr1g0154131 25.000 292 176 9 255 517 179 456 1.48e-12 70.5
MsaG001439 MtrunA17_Chr5g0429931 25.185 270 158 8 271 532 10 243 4.96e-12 66.6
MsaG001439 MtrunA17_Chr1g0163061 33.654 104 64 3 254 354 15 116 3.25e-11 64.7
MsaG001439 MtrunA17_Chr1g0163061 36.264 91 55 2 14 101 24 114 4.10e-11 64.3
MsaG001439 MtrunA17_Chr1g0162441 33.663 101 61 2 7 101 5 105 7.83e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG001439 AT3G18990.1 25.588 340 190 10 253 534 5 339 4.32e-21 95.5
MsaG001439 AT3G18990.1 25.581 344 168 11 7 272 4 337 2.59e-20 93.2
MsaG001439 AT3G18990.2 25.664 339 189 10 253 533 5 338 5.06e-21 95.9
MsaG001439 AT3G18990.2 25.581 344 168 11 7 272 4 337 3.37e-20 93.6
MsaG001439 AT4G01580.1 33.333 117 69 3 254 363 30 144 4.95e-11 62.8

Find 120 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACACCATTTGGTAATTTA+AGG 0.128822 1:-20158573 None:intergenic
GGAAATATGTGGAGAAATTT+TGG 0.157790 1:+20158527 MsaT001439.1:CDS
TATTTCAAGGTTAAGATATT+TGG 0.166474 1:+20158715 MsaT001439.1:CDS
TATTTCAAGGTTCAGATATT+TGG 0.174943 1:+20151376 MsaT001439.1:CDS
TTTGCAAAGTTTCTGAAATA+TGG 0.203016 1:+20151319 MsaT001439.1:CDS
AAACTCTCTGGAGTTGAAAA+TGG 0.208119 1:+20156120 MsaT001439.1:CDS
TTTGCAAAGTCTCTCAAATA+TGG 0.220809 1:+20158658 MsaT001439.1:CDS
AAGAACTCACCTGAGAATTT+TGG 0.224542 1:-20151598 None:intergenic
TGGAGAGTAATGGAGATATT+TGG 0.238170 1:+20151275 MsaT001439.1:CDS
CCCCGAAGAGCATGCACTTT+TGG 0.246328 1:-20160288 None:intergenic
TTTGGGAATTGAAGGAATAT+TGG 0.249785 1:-20151226 None:intergenic
GCATGCACCAAAGAGATTTA+TGG 0.255225 1:+20164122 MsaT001439.1:intron
TCCAAAAGTGCATGCTCTTC+GGG 0.257450 1:+20160287 MsaT001439.1:CDS
AGAAGTATGTGGAGAACTTT+TGG 0.262295 1:+20151188 MsaT001439.1:CDS
AAAGAATGCAAAGTGAAAAT+TGG 0.268721 1:+20164267 MsaT001439.1:CDS
TTTGGTAATTTAAGGAATAT+AGG 0.271551 1:-20158565 None:intergenic
ACACAATACATTCAAGGTTT+TGG 0.282064 1:+20163984 MsaT001439.1:CDS
AAAATTTGTGGAGTTGAAAA+TGG 0.282812 1:+20164161 MsaT001439.1:CDS
CCTCTTTCCATAAATCTCTT+TGG 0.284821 1:-20164129 None:intergenic
TGGAGAATAATGGTGATATT+TGG 0.299993 1:+20158614 MsaT001439.1:CDS
AAAGTTCTCCACATACTTCT+TGG 0.303447 1:-20151185 None:intergenic
TCTTCTAATTCTATGACTAT+TGG 0.312742 1:+20159408 MsaT001439.1:CDS
GTGTTCAACAAAAGATATAT+TGG 0.315711 1:+20158590 MsaT001439.1:CDS
CAATATTATCCTATGAAAAT+CGG 0.317709 1:-20151027 None:intergenic
TTGGGAATTGAAGGAATATT+GGG 0.332157 1:-20151225 None:intergenic
AAATTTCTCCACATATTTCC+TGG 0.339774 1:-20158524 None:intergenic
CTTAGGGTTTGGTCCCTTGT+TGG 0.342702 1:-20159535 None:intergenic
CCTTGCAACTTCTTAGGGTT+TGG 0.347894 1:-20159546 None:intergenic
TTCCAAAAGTGCATGCTCTT+CGG 0.354458 1:+20160286 MsaT001439.1:CDS
TTGGTAATTTAAGGAATATA+GGG 0.370997 1:-20158564 None:intergenic
AATTTACCCTACCGGGTGTT+TGG 0.375647 1:-20164013 None:intergenic
CTTTCATTAACAACTTCAAC+TGG 0.392346 1:-20152561 None:intergenic
CAAGCTCAAATGACAACAAA+TGG 0.395225 1:+20158853 MsaT001439.1:CDS
ATAATTTATTTCTAGAGTAT+TGG 0.402563 1:-20151401 None:intergenic
AAATTTGTGGAGTTGAAAAT+GGG 0.407272 1:+20164162 MsaT001439.1:CDS
AACTCTCTGGAGTTGAAAAT+GGG 0.410653 1:+20156121 MsaT001439.1:CDS
AATATTATCCTATGAAAATC+GGG 0.414910 1:-20151026 None:intergenic
GTGTTTAAAGTTTCCATTGT+GGG 0.423593 1:+20164330 MsaT001439.1:CDS
AAAGAATTCAAAGTGGAGAT+TGG 0.425579 1:+20156226 MsaT001439.1:CDS
ATATATTGGGTGGAGAATAA+TGG 0.427862 1:+20158604 MsaT001439.1:CDS
GTTGTCATTTGAGCTTGCTT+TGG 0.430811 1:-20158847 None:intergenic
GTTGAAGTTGTTAATGAAAG+TGG 0.433708 1:+20152564 MsaT001439.1:CDS
AGCTTCAACAACTTCATCAA+TGG 0.433788 1:-20151437 None:intergenic
TGATAAGAGTTTAGATGAAA+GGG 0.437563 1:+20151501 MsaT001439.1:CDS
CCAAAGGAGTTTATGAAAAG+AGG 0.438669 1:+20156088 MsaT001439.1:CDS
GAACACCATTTGGGAATTGA+AGG 0.440819 1:-20151234 None:intergenic
AAGTTCTCCACATACTTCTT+GGG 0.445593 1:-20151184 None:intergenic
GATGAAACACAATACATTCA+AGG 0.445828 1:+20163978 MsaT001439.1:CDS
AGGAAGTCATGAAAACTCTC+TGG 0.451275 1:+20156108 MsaT001439.1:CDS
TGTTCAACAAAAGATATATT+GGG 0.453889 1:+20158591 MsaT001439.1:CDS
TATTGGTGGATCATATTTCA+AGG 0.456312 1:+20158702 MsaT001439.1:CDS
GACTTACCATCCTGCATCCA+TGG 0.457913 1:-20152635 None:intergenic
GTGATAAGAGTTTAGATGAA+AGG 0.458458 1:+20151500 MsaT001439.1:CDS
GTTATAGGTTCTCTGAAGGT+TGG 0.464034 1:+20156191 MsaT001439.1:intron
CGTGGTTGTCAGTTCAGTAA+AGG 0.468915 1:+20164228 MsaT001439.1:CDS
CTTGTCCTTTGAGCTTGGGT+GGG 0.470047 1:-20151529 None:intergenic
CATAGGTGGATCATATTTCA+AGG 0.473274 1:+20151363 MsaT001439.1:CDS
AACTGACAACCACGAATACT+AGG 0.474382 1:-20164219 None:intergenic
ATTTATTATCCTAGTATTCG+TGG 0.474870 1:+20164210 MsaT001439.1:CDS
TCTTGTCCTTTGAGCTTGGG+TGG 0.484511 1:-20151530 None:intergenic
CTTTGTTGCAGAGGATTCCC+AGG 0.485121 1:+20158506 MsaT001439.1:intron
TTACGCCCATGGTCATATCT+TGG 0.485636 1:+20159187 MsaT001439.1:CDS
AATCTTACGCCCATGGATGC+AGG 0.492072 1:+20152625 MsaT001439.1:CDS
GTAAATTTGTGATGACTCAA+AGG 0.493932 1:+20159478 MsaT001439.1:CDS
AATTTCTCCACATATTTCCT+GGG 0.497622 1:-20158523 None:intergenic
ATATTCCTTAAATTACCAAA+TGG 0.502910 1:+20158568 MsaT001439.1:CDS
TAAATTTGTGATGACTCAAA+GGG 0.506330 1:+20159479 MsaT001439.1:CDS
ACTATATCCACTTTCATAGC+AGG 0.506832 1:-20159369 None:intergenic
CCAAAGAGATTTATGGAAAG+AGG 0.511759 1:+20164129 MsaT001439.1:CDS
TGTTCTCATCAATCCGCTCT+AGG 0.512670 1:-20164302 None:intergenic
ATATTCCTTCAATTCCCAAA+TGG 0.516176 1:+20151229 MsaT001439.1:CDS
TCATACTTGAACAAATTTGA+AGG 0.519341 1:+20159318 MsaT001439.1:CDS
ATAGTAATAGTGAATAAAAG+TGG 0.519587 1:-20159504 None:intergenic
CTAATTCTATGACTATTGGT+TGG 0.519860 1:+20159412 MsaT001439.1:CDS
CATACTTGAACAAATTTGAA+GGG 0.523429 1:+20159319 MsaT001439.1:CDS
GGGATTGCAAGCTTAAGAGT+TGG 0.529065 1:+20159339 MsaT001439.1:CDS
GTTGTCAGTTCAGTAAAGGT+TGG 0.536590 1:+20164232 MsaT001439.1:CDS
ACTACCCAGCCAAAATTCTC+AGG 0.537063 1:+20151589 MsaT001439.1:CDS
CATGGTTATAGGTTCTCTGA+AGG 0.540492 1:+20156187 MsaT001439.1:intron
CATCCATGGGCGTAAGATTG+TGG 0.545061 1:-20152621 None:intergenic
ATGATCGTGATATTCTAAAG+AGG 0.547186 1:+20160235 MsaT001439.1:CDS
TACTATCACTAAAGCCAACA+AGG 0.548522 1:+20159521 MsaT001439.1:CDS
TCCTTTGCAGGTGGGGACAG+AGG 0.549969 1:+20152507 MsaT001439.1:intron
ATTCTAAAGAGGAAAGACAT+TGG 0.551775 1:+20160246 MsaT001439.1:CDS
AAGCTCAAATGACAACAAAT+GGG 0.558116 1:+20158854 MsaT001439.1:CDS
CAGAGGAGGCATGATTAAGA+AGG 0.558194 1:+20152524 MsaT001439.1:CDS
TATGATCTTGAAAAGTTGCA+TGG 0.578670 1:-20159300 None:intergenic
GAGGATTCCCAGGAAATATG+TGG 0.582383 1:+20158516 MsaT001439.1:intron
TGCAAGCTTAAGAGTTGGAG+AGG 0.584782 1:+20159344 MsaT001439.1:CDS
TTGCCACAATCTTACGCCCA+TGG 0.586417 1:+20152618 MsaT001439.1:CDS
AGAGGACCCTGCTATGAAAG+TGG 0.587637 1:+20159362 MsaT001439.1:CDS
ACTTACCATCCTGCATCCAT+GGG 0.589632 1:-20152634 None:intergenic
GAAATACTTGTCTCCTAGAG+CGG 0.589908 1:+20164289 MsaT001439.1:CDS
CCAAACCCTAAGAAGTTGCA+AGG 0.590895 1:+20159546 MsaT001439.1:CDS
GAGGATTCCCAAGAAGTATG+TGG 0.591680 1:+20151177 MsaT001439.1:intron
ATGACACAAACTTACGCCCA+TGG 0.594951 1:+20159176 MsaT001439.1:CDS
ATATTTGCAGAATGTTCCAA+AGG 0.598638 1:+20156072 MsaT001439.1:intron
AAAGAAGGAGTTGAAGTGAG+TGG 0.599535 1:+20151472 MsaT001439.1:CDS
CTCTCTGGAGTTGAAAATGG+GGG 0.599653 1:+20156123 MsaT001439.1:CDS
ATTTGTGGAGTTGAAAATGG+GGG 0.611391 1:+20164164 MsaT001439.1:CDS
TTTGGTGAATTCCAAACACC+CGG 0.613257 1:+20164002 MsaT001439.1:CDS
ATTCATAAAAGAATTCAAAG+TGG 0.616700 1:+20156219 MsaT001439.1:CDS
AAATACCCACCCAAGCTCAA+AGG 0.617335 1:+20151524 MsaT001439.1:CDS
TTTGTGGAGTTGAAAATGGG+GGG 0.623702 1:+20164165 MsaT001439.1:CDS
CTATATCCACTTTCATAGCA+GGG 0.623870 1:-20159368 None:intergenic
TTTGCAGGTGGGGACAGAGG+AGG 0.624914 1:+20152510 MsaT001439.1:intron
AATTTGTGGAGTTGAAAATG+GGG 0.630421 1:+20164163 MsaT001439.1:CDS
TCAACAAAAGATATATTGGG+TGG 0.634459 1:+20158594 MsaT001439.1:CDS
CCAAAAGTGCATGCTCTTCG+GGG 0.637566 1:+20160288 MsaT001439.1:CDS
TGTGTTTAAAGTTTCCATTG+TGG 0.641962 1:+20164329 MsaT001439.1:CDS
ACTCTCTGGAGTTGAAAATG+GGG 0.658989 1:+20156122 MsaT001439.1:CDS
ACTATCACTAAAGCCAACAA+GGG 0.662647 1:+20159522 MsaT001439.1:CDS
TTACGCCCATGGATGCAGGA+TGG 0.665735 1:+20152629 MsaT001439.1:CDS
ACTTACCAAGATATGACCAT+GGG 0.667874 1:-20159192 None:intergenic
ATATTATCCTATGAAAATCG+GGG 0.671225 1:-20151025 None:intergenic
CATTGGGTTCTATCCCACAA+TGG 0.671401 1:-20164343 None:intergenic
AGGTAGGAACATTGAAGACA+CGG 0.671619 1:+20159073 MsaT001439.1:intron
AAGACATTGGAGAAACCTGT+AGG 0.672963 1:+20160259 MsaT001439.1:CDS
TACTTACCAAGATATGACCA+TGG 0.678715 1:-20159193 None:intergenic
TCTCTGGAGTTGAAAATGGG+GGG 0.680996 1:+20156124 MsaT001439.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 20151008 20164356 20151008 ID=MsaG001439
Chr1 mRNA 20151008 20164356 20151008 ID=MsaT001439.1;Parent=MsaG001439
Chr1 exon 20151008 20151064 20151008 ID=MsaT001439.1.exon1;Parent=MsaT001439.1
Chr1 CDS 20151008 20151064 20151008 ID=cds.MsaT001439.1;Parent=MsaT001439.1
Chr1 exon 20151178 20151610 20151178 ID=MsaT001439.1.exon2;Parent=MsaT001439.1
Chr1 CDS 20151178 20151610 20151178 ID=cds.MsaT001439.1;Parent=MsaT001439.1
Chr1 exon 20152517 20152650 20152517 ID=MsaT001439.1.exon3;Parent=MsaT001439.1
Chr1 CDS 20152517 20152650 20152517 ID=cds.MsaT001439.1;Parent=MsaT001439.1
Chr1 exon 20156082 20156155 20156082 ID=MsaT001439.1.exon4;Parent=MsaT001439.1
Chr1 CDS 20156082 20156155 20156082 ID=cds.MsaT001439.1;Parent=MsaT001439.1
Chr1 exon 20156198 20156284 20156198 ID=MsaT001439.1.exon5;Parent=MsaT001439.1
Chr1 CDS 20156198 20156284 20156198 ID=cds.MsaT001439.1;Parent=MsaT001439.1
Chr1 exon 20158378 20158402 20158378 ID=MsaT001439.1.exon6;Parent=MsaT001439.1
Chr1 CDS 20158378 20158402 20158378 ID=cds.MsaT001439.1;Parent=MsaT001439.1
Chr1 exon 20158517 20158925 20158517 ID=MsaT001439.1.exon7;Parent=MsaT001439.1
Chr1 CDS 20158517 20158925 20158517 ID=cds.MsaT001439.1;Parent=MsaT001439.1
Chr1 exon 20159075 20159208 20159075 ID=MsaT001439.1.exon8;Parent=MsaT001439.1
Chr1 CDS 20159075 20159208 20159075 ID=cds.MsaT001439.1;Parent=MsaT001439.1
Chr1 exon 20159294 20159567 20159294 ID=MsaT001439.1.exon9;Parent=MsaT001439.1
Chr1 CDS 20159294 20159567 20159294 ID=cds.MsaT001439.1;Parent=MsaT001439.1
Chr1 exon 20160220 20160309 20160220 ID=MsaT001439.1.exon10;Parent=MsaT001439.1
Chr1 CDS 20160220 20160309 20160220 ID=cds.MsaT001439.1;Parent=MsaT001439.1
Chr1 exon 20163959 20164023 20163959 ID=MsaT001439.1.exon11;Parent=MsaT001439.1
Chr1 CDS 20163959 20164023 20163959 ID=cds.MsaT001439.1;Parent=MsaT001439.1
Chr1 exon 20164123 20164356 20164123 ID=MsaT001439.1.exon12;Parent=MsaT001439.1
Chr1 CDS 20164123 20164356 20164123 ID=cds.MsaT001439.1;Parent=MsaT001439.1
Gene Sequence

>MsaT001439.1

ATGTCATTTCAAAATATCCCCGATTTTCATAGGATAATATTGCAAGATAAGAAGCTTAGGATTCCCAAGAAGTATGTGGAGAACTTTTGGAAAAGAATATCAAACCCAATATTCCTTCAATTCCCAAATGGTGTTCAACAAAAAATATTTTGGGTGGAGAGTAATGGAGATATTTGGTTTCAAAAAAATTGGGAAAGTTTTGCAAAGTTTCTGAAATATGGTTATCTCTTAACTTTTAAATACATAGGTGGATCATATTTCAAGGTTCAGATATTTGGTGCCAATACTCTAGAAATAAATTATTCCAACATAAAATCCATTGATGAAGTTGTTGAAGCTACAGAAAAAGCTAAAGAAGGAGTTGAAGTGAGTGGTGATAGTGATAAGAGTTTAGATGAAAGGGAAATACCCACCCAAGCTCAAAGGACAAGAAAAAATGGCAAGAGAAAAAATAGTGTGGATTTGGATACTACCCAGCCAAAATTCTCAGGTGGGGACAGAGGAGGCATGATTAAGAAGGCTAAAAATTGTTCACCAGTTGAAGTTGTTAATGAAAGTGGCAATAATGAGAATCCCTTTTTTGATGTTACATTGCCACAATCTTACGCCCATGGATGCAGGATGAATGTTCCAAAGGAGTTTATGAAAAGAGGAAGTCATGAAAACTCTCTGGAGTTGAAAATGGGGGGACGATCATGGTTCTCTGAAGGTTGGAGACAATTCATAAAAGAATTCAAAGTGGAGATTGGAGATACTCTTCTCTTCAAGTTGATTGATGAGAGCAAGATAATATTGCAAGATAAGAAGCTTAGGATTCCCAGGAAATATGTGGAGAAATTTTGGAAAGGAATATCAAACCCTATATTCCTTAAATTACCAAATGGTGTTCAACAAAAGATATATTGGGTGGAGAATAATGGTGATATTTGGTTTCAAAAAAATTGGGATAATTTTGCAAAGTCTCTCAAATATGGAAATCTTTTAATTTTTAAATATATTGGTGGATCATATTTCAAGGTTAAGATATTTGGCGTCAATGCTTTAGAAATAGATTATTCCATTATAAAAGCTGTTGATGAAGTTGTTGAAGCTAGAAAAGAAGCTAAAGAAATTACTGATTTGACTGTTGAGAGTGAATTACCAAAGCAAGCTCAAATGACAACAAATGGGAAGAGAAAAATGAGTATAGATACTGACACTCTTAAGCAAAAATTCCCAGGTAGGAACATTGAAGACACGGTTAAGAAAGTTAAAAAAAGCTCAAGAATTGAAGTTGTTAATGAGACAACCAATGATGAGAATCCCGTTTTTGAAGTTTTAATGACACAAACTTACGCCCATGGTCATATCTTGGTGATACCATGCAACTTTTCAAGATCATACTTGAACAAATTTGAAGGGATTGCAAGCTTAAGAGTTGGAGAGGACCCTGCTATGAAAGTGGATATAGTGTTTAACAATAAAAGATCTTCTAATTCTATGACTATTGGTTGGAAGTCATTTAACCAAAAATATAACTTAAAAGTTGGTGATATATGTAAATTTGTGATGACTCAAAGGGAACCACTTTTATTCACTATTACTATCACTAAAGCCAACAAGGGACCAAACCCTAAGAAGTTGCAAGAAGGGATCTCTTATGATGATCGTGATATTCTAAAGAGGAAAGACATTGGAGAAACCTGTAGGACCCTTCCAAAAGTGCATGCTCTTCGGGAATCAAAGGGTCAAAACGTGATGAAACACAATACATTCAAGGTTTTGGTGAATTCCAAACACCCGCATGCACCAAAGAGATTTATGGAAAGAGGATGTCGTGAAAAATTTGTGGAGTTGAAAATGGGGGGACAATCATGGTTCGTAAAAGTGATTTATTATCCTAGTATTCGTGGTTGTCAGTTCAGTAAAGGTTGGATAAAATTTATGAAAGAATGCAAAGTGAAAATTGGAAATACTTGTCTCCTAGAGCGGATTGATGAGAACAATTATGTGTTTAAAGTTTCCATTGTGGGATAG
Protein sequence

>MsaT001439.1

MSFQNIPDFHRIILQDKKLRIPKKYVENFWKRISNPIFLQFPNGVQQKIFWVESNGDIWFQKNWESFAKFLKYGYLLTFKYIGGSYFKVQIFGANTLEINYSNIKSIDEVVEATEKAKEGVEVSGDSDKSLDEREIPTQAQRTRKNGKRKNSVDLDTTQPKFSGGDRGGMIKKAKNCSPVEVVNESGNNENPFFDVTLPQSYAHGCRMNVPKEFMKRGSHENSLELKMGGRSWFSEGWRQFIKEFKVEIGDTLLFKLIDESKIILQDKKLRIPRKYVEKFWKGISNPIFLKLPNGVQQKIYWVENNGDIWFQKNWDNFAKSLKYGNLLIFKYIGGSYFKVKIFGVNALEIDYSIIKAVDEVVEARKEAKEITDLTVESELPKQAQMTTNGKRKMSIDTDTLKQKFPGRNIEDTVKKVKKSSRIEVVNETTNDENPVFEVLMTQTYAHGHILVIPCNFSRSYLNKFEGIASLRVGEDPAMKVDIVFNNKRSSNSMTIGWKSFNQKYNLKVGDICKFVMTQREPLLFTITITKANKGPNPKKLQEGISYDDRDILKRKDIGETCRTLPKVHALRESKGQNVMKHNTFKVLVNSKHPHAPKRFMERGCREKFVELKMGGQSWFVKVIYYPSIRGCQFSKGWIKFMKECKVKIGNTCLLERIDENNYVFKVSIVG*