Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG001555 | RHN78372.1 | 88.793 | 580 | 47 | 1 | 1 | 580 | 1 | 562 | 0.0 | 1073 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG001555 | sp|Q336N8|JM706_ORYSJ | 52.248 | 467 | 218 | 3 | 6 | 469 | 101 | 565 | 1.56e-167 | 501 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG001555 | tr|A0A396JLW8|A0A396JLW8_MEDTR | 88.793 | 580 | 47 | 1 | 1 | 580 | 1 | 562 | 0.0 | 1073 |
Gene ID | Type | Classification |
---|---|---|
MsaG001555 | TR | Jumonji |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG000222 | MsaG001555 | 0.831957 | 2.245938e-55 | 6.878046e-53 |
MsaG000151 | MsaG001555 | 0.800644 | 2.188848e-48 | 3.002902e-46 |
MsaG000163 | MsaG001555 | 0.850892 | 2.415214e-60 | 1.349880e-57 |
MsaG000242 | MsaG001555 | 0.843152 | 3.114824e-58 | 1.343950e-55 |
MsaG000370 | MsaG001555 | 0.817865 | 4.602997e-52 | 9.574002e-50 |
MsaG000707 | MsaG001555 | 0.843246 | 2.940032e-58 | 1.272423e-55 |
MsaG000977 | MsaG001555 | 0.850761 | 2.627050e-60 | 1.461601e-57 |
MsaG001273 | MsaG001555 | 0.846484 | 3.971653e-59 | 1.911484e-56 |
MsaG001371 | MsaG001555 | 0.831175 | 3.492581e-55 | 1.045377e-52 |
MsaG001765 | MsaG001555 | 0.842422 | 4.857476e-58 | 2.047548e-55 |
MsaG001878 | MsaG001555 | 0.878893 | 4.081523e-69 | 7.000631e-66 |
MsaG002526 | MsaG001555 | 0.812573 | 6.812791e-51 | 1.239260e-48 |
MsaG002604 | MsaG001555 | 0.833571 | 8.967462e-56 | 2.878675e-53 |
MsaG002796 | MsaG001555 | 0.807697 | 7.572485e-50 | 1.223370e-47 |
MsaG003072 | MsaG001555 | 0.852425 | 8.923449e-61 | 5.261788e-58 |
MsaG003088 | MsaG001555 | 0.812931 | 5.693580e-51 | 1.044913e-48 |
MsaG003399 | MsaG001555 | 0.802762 | 8.086037e-49 | 1.163987e-46 |
MsaG003384 | MsaG001555 | 0.831281 | 3.289613e-55 | 9.876541e-53 |
MsaG003444 | MsaG001555 | 0.832393 | 1.754540e-55 | 5.441136e-53 |
MsaG003503 | MsaG001555 | 0.855049 | 1.583031e-61 | 1.024458e-58 |
MsaG003536 | MsaG001555 | 0.832115 | 2.053237e-55 | 6.317091e-53 |
MsaG003632 | MsaG001555 | 0.850800 | 2.562908e-60 | 1.427874e-57 |
MsaG003662 | MsaG001555 | 0.803408 | 5.952277e-49 | 8.697095e-47 |
MsaG003667 | MsaG001555 | 0.808547 | 5.001758e-50 | 8.247469e-48 |
MsaG003795 | MsaG001555 | 0.830229 | 5.941031e-55 | 1.730642e-52 |
MsaG003894 | MsaG001555 | 0.815062 | 1.938966e-51 | 3.754024e-49 |
MsaG003966 | MsaG001555 | 0.841436 | 8.825982e-58 | 3.605001e-55 |
MsaG003972 | MsaG001555 | 0.801084 | 1.781665e-48 | 2.468529e-46 |
MsaG004152 | MsaG001555 | 0.871056 | 1.864570e-66 | 2.259527e-63 |
MsaG004153 | MsaG001555 | 0.894222 | 6.765425e-75 | 2.498535e-71 |
MsaG004324 | MsaG001555 | 0.857001 | 4.274993e-62 | 2.969998e-59 |
MsaG004426 | MsaG001555 | 0.809284 | 3.484147e-50 | 5.847701e-48 |
MsaG004656 | MsaG001555 | 0.862862 | 7.442553e-64 | 6.460105e-61 |
MsaG004681 | MsaG001555 | 0.803494 | 5.715159e-49 | 8.367143e-47 |
MsaG004930 | MsaG001555 | 0.845970 | 5.473780e-59 | 2.589883e-56 |
MsaG004943 | MsaG001555 | 0.827123 | 3.319477e-54 | 8.856918e-52 |
MsaG004972 | MsaG001555 | 0.821076 | 8.594341e-53 | 1.944831e-50 |
MsaG005005 | MsaG001555 | 0.810810 | 1.640427e-50 | 2.857263e-48 |
MsaG005073 | MsaG001555 | 0.823271 | 2.676126e-53 | 6.422618e-51 |
MsaG005105 | MsaG001555 | 0.835821 | 2.450230e-56 | 8.411666e-54 |
MsaG005601 | MsaG001555 | 0.847144 | 2.627518e-59 | 1.292904e-56 |
MsaG005880 | MsaG001555 | 0.843457 | 2.584445e-58 | 1.126128e-55 |
MsaG005994 | MsaG001555 | 0.827081 | 3.397112e-54 | 9.053334e-52 |
MsaG006065 | MsaG001555 | 0.804920 | 2.895154e-49 | 4.381024e-47 |
MsaG006122 | MsaG001555 | 0.819099 | 2.423750e-52 | 5.205812e-50 |
MsaG006240 | MsaG001555 | 0.835584 | 2.812475e-56 | 9.586606e-54 |
MsaG006351 | MsaG001555 | 0.831235 | 3.375963e-55 | 1.012210e-52 |
MsaG006407 | MsaG001555 | 0.809995 | 2.454529e-50 | 4.191206e-48 |
MsaG006422 | MsaG001555 | 0.857063 | 4.097920e-62 | 2.853740e-59 |
MsaG006480 | MsaG001555 | 0.830331 | 5.610677e-55 | 1.639195e-52 |
MsaG006610 | MsaG001555 | 0.815908 | 1.259135e-51 | 2.490653e-49 |
MsaG006691 | MsaG001555 | 0.828487 | 1.566101e-54 | 4.341818e-52 |
MsaG006729 | MsaG001555 | 0.869645 | 5.383491e-66 | 6.146362e-63 |
MsaG006757 | MsaG001555 | 0.889709 | 4.172237e-73 | 1.211313e-69 |
MsaG006801 | MsaG001555 | 0.813961 | 3.387250e-51 | 6.379161e-49 |
MsaG006823 | MsaG001555 | 0.809710 | 2.825832e-50 | 4.791988e-48 |
MsaG006944 | MsaG001555 | 0.820866 | 9.598638e-53 | 2.159942e-50 |
MsaG007006 | MsaG001555 | 0.813327 | 4.665659e-51 | 8.647727e-49 |
MsaG007092 | MsaG001555 | 0.914691 | 3.532014e-84 | 4.563834e-80 |
MsaG007182 | MsaG001555 | 0.864748 | 1.940808e-64 | 1.815205e-61 |
MsaG007314 | MsaG001555 | 0.831833 | 2.409046e-55 | 7.351096e-53 |
MsaG007481 | MsaG001555 | 0.816538 | 9.119095e-52 | 1.833005e-49 |
MsaG007551 | MsaG001555 | 0.880507 | 1.096442e-69 | 2.026680e-66 |
MsaG007563 | MsaG001555 | 0.817061 | 6.968389e-52 | 1.419754e-49 |
MsaG007737 | MsaG001555 | 0.900186 | 2.169147e-77 | 1.122186e-73 |
MsaG007810 | MsaG001555 | 0.814076 | 3.196190e-51 | 6.036574e-49 |
MsaG007908 | MsaG001555 | 0.849380 | 6.374275e-60 | 3.382750e-57 |
MsaG008003 | MsaG001555 | 0.810511 | 1.902276e-50 | 3.289287e-48 |
MsaG008223 | MsaG001555 | 0.848693 | 9.871199e-60 | 5.116811e-57 |
MsaG008238 | MsaG001555 | 0.815351 | 1.673189e-51 | 3.263328e-49 |
MsaG008697 | MsaG001555 | 0.811960 | 9.257951e-51 | 1.658658e-48 |
MsaG008704 | MsaG001555 | 0.801292 | 1.616236e-48 | 2.249913e-46 |
MsaG009121 | MsaG001555 | 0.831921 | 2.291866e-55 | 7.011444e-53 |
MsaG009728 | MsaG001555 | 0.807474 | 8.437294e-50 | 1.355826e-47 |
MsaG010420 | MsaG001555 | 0.817026 | 7.095918e-52 | 1.444433e-49 |
MsaG010489 | MsaG001555 | 0.812524 | 6.980330e-51 | 1.268196e-48 |
MsaG010507 | MsaG001555 | 0.824604 | 1.307134e-53 | 3.252656e-51 |
MsaG010854 | MsaG001555 | 0.806686 | 1.236651e-49 | 1.950573e-47 |
MsaG010978 | MsaG001555 | 0.826239 | 5.383234e-54 | 1.401398e-51 |
MsaG011177 | MsaG001555 | 0.806426 | 1.402745e-49 | 2.199015e-47 |
MsaG011132 | MsaG001555 | 0.810560 | 1.857106e-50 | 3.214940e-48 |
MsaG011383 | MsaG001555 | 0.819727 | 1.746520e-52 | 3.813223e-50 |
MsaG011386 | MsaG001555 | 0.836880 | 1.321736e-56 | 4.684520e-54 |
MsaG011508 | MsaG001555 | 0.804907 | 2.912923e-49 | 4.406639e-47 |
MsaG012040 | MsaG001555 | 0.803177 | 6.642535e-49 | 9.654061e-47 |
MsaG012060 | MsaG001555 | 0.834418 | 5.514261e-56 | 1.815290e-53 |
MsaG012084 | MsaG001555 | 0.809483 | 3.159835e-50 | 5.329365e-48 |
MsaG012163 | MsaG001555 | 0.855649 | 1.060455e-61 | 7.014163e-59 |
MsaG012209 | MsaG001555 | 0.811035 | 1.467258e-50 | 2.569739e-48 |
MsaG012234 | MsaG001555 | 0.829388 | 9.497237e-55 | 2.700773e-52 |
MsaG012303 | MsaG001555 | 0.812564 | 6.843197e-51 | 1.244512e-48 |
MsaG012308 | MsaG001555 | 0.813684 | 3.896113e-51 | 7.286515e-49 |
MsaG012449 | MsaG001555 | 0.864441 | 2.418356e-64 | 2.234433e-61 |
MsaG041982 | MsaG001555 | 0.814345 | 2.789986e-51 | 5.305205e-49 |
MsaG042068 | MsaG001555 | 0.814690 | 2.342040e-51 | 4.492038e-49 |
MsaG042071 | MsaG001555 | 0.809200 | 3.630237e-50 | 6.080661e-48 |
MsaG042512 | MsaG001555 | 0.824603 | 1.308035e-53 | 3.254786e-51 |
MsaG042710 | MsaG001555 | 0.812543 | 6.913640e-51 | 1.256684e-48 |
MsaG043063 | MsaG001555 | 0.823224 | 2.743463e-53 | 6.575683e-51 |
MsaG043350 | MsaG001555 | 0.839120 | 3.531218e-57 | 1.341009e-54 |
MsaG043396 | MsaG001555 | 0.880185 | 1.427168e-69 | 2.598025e-66 |
MsaG044019 | MsaG001555 | 0.864730 | 1.965879e-64 | 1.837403e-61 |
MsaG044113 | MsaG001555 | 0.873160 | 3.748134e-67 | 4.973151e-64 |
MsaG044120 | MsaG001555 | 0.802126 | 1.091951e-48 | 1.549124e-46 |
MsaG044303 | MsaG001555 | 0.877855 | 9.407230e-69 | 1.537993e-65 |
MsaG044728 | MsaG001555 | 0.851723 | 1.409593e-60 | 8.108501e-58 |
MsaG044887 | MsaG001555 | 0.808675 | 4.697751e-50 | 7.770415e-48 |
MsaG045200 | MsaG001555 | 0.843145 | 3.126998e-58 | 1.348923e-55 |
MsaG045290 | MsaG001555 | 0.814973 | 2.028302e-51 | 3.918274e-49 |
MsaG045331 | MsaG001555 | 0.808425 | 5.308335e-50 | 8.727254e-48 |
MsaG045493 | MsaG001555 | 0.856601 | 5.596008e-62 | 3.832155e-59 |
MsaG045535 | MsaG001555 | 0.857730 | 2.607962e-62 | 1.861804e-59 |
MsaG045703 | MsaG001555 | 0.835786 | 2.501655e-56 | 8.578890e-54 |
MsaG045778 | MsaG001555 | 0.858356 | 1.702779e-62 | 1.244220e-59 |
MsaG046104 | MsaG001555 | 0.814978 | 2.023040e-51 | 3.908585e-49 |
MsaG046155 | MsaG001555 | 0.810953 | 1.528031e-50 | 2.670767e-48 |
MsaG046538 | MsaG001555 | 0.833611 | 8.760153e-56 | 2.815557e-53 |
MsaG046436 | MsaG001555 | 0.890607 | 1.863992e-73 | 5.671001e-70 |
MsaG046446 | MsaG001555 | 0.819048 | 2.489186e-52 | 5.339155e-50 |
MsaG046497 | MsaG001555 | 0.805941 | 1.772426e-49 | 2.746742e-47 |
MsaG046503 | MsaG001555 | 0.800010 | 2.942403e-48 | 3.979324e-46 |
MsaG046670 | MsaG001555 | 0.823162 | 2.836879e-53 | 6.788030e-51 |
MsaG046653 | MsaG001555 | 0.806119 | 1.626530e-49 | 2.531281e-47 |
MsaG046696 | MsaG001555 | 0.807301 | 9.180549e-50 | 1.469157e-47 |
MsaG046733 | MsaG001555 | 0.813353 | 4.603072e-51 | 8.537407e-49 |
MsaG047066 | MsaG001555 | 0.817496 | 5.568650e-52 | 1.147319e-49 |
MsaG047137 | MsaG001555 | 0.837395 | 9.774937e-57 | 3.519344e-54 |
MsaG002256 | MsaG001555 | 0.823636 | 2.200875e-53 | 5.334624e-51 |
MsaG001346 | MsaG001555 | 0.872626 | 5.646740e-67 | 7.319631e-64 |
MsaG001555 | MsaG001786 | 0.807080 | 1.022011e-49 | 1.626981e-47 |
MsaG001555 | MsaG007986 | 0.857831 | 2.435071e-62 | 1.744875e-59 |
MsaG001555 | MsaG008901 | 0.819352 | 2.124050e-52 | 4.592552e-50 |
MsaG001555 | MsaG010138 | 0.816636 | 8.672235e-52 | 1.747556e-49 |
MsaG001555 | MsaG008445 | 0.852883 | 6.614643e-61 | 3.963311e-58 |
MsaG001555 | MsaG008209 | 0.829250 | 1.025488e-54 | 2.904465e-52 |
MsaG001555 | MsaG007261 | 0.842062 | 6.043680e-58 | 2.518311e-55 |
MsaG001555 | MsaG012667 | 0.840911 | 1.210920e-57 | 4.864265e-55 |
MsaG001555 | MsaG012932 | 0.859043 | 1.063781e-62 | 7.976179e-60 |
MsaG001555 | MsaG013545 | 0.801878 | 1.227155e-48 | 1.731202e-46 |
MsaG001555 | MsaG014437 | 0.840028 | 2.055513e-57 | 8.031592e-55 |
MsaG001555 | MsaG014896 | 0.824474 | 1.402328e-53 | 3.477191e-51 |
MsaG001555 | MsaG012729 | 0.887021 | 4.464855e-72 | 1.129964e-68 |
MsaG001555 | MsaG011821 | 0.823973 | 1.836304e-53 | 4.491663e-51 |
MsaG001555 | MsaG019387 | 0.809371 | 3.337358e-50 | 5.613280e-48 |
MsaG001555 | MsaG022889 | 0.829528 | 8.785791e-55 | 2.508558e-52 |
MsaG001555 | MsaG027166 | 0.829996 | 6.765905e-55 | 1.957922e-52 |
MsaG001555 | MsaG028732 | 0.847455 | 2.159761e-59 | 1.073916e-56 |
MsaG001555 | MsaG028280 | 0.831114 | 3.614734e-55 | 1.080049e-52 |
MsaG001555 | MsaG033146 | 0.837361 | 9.975375e-57 | 3.587521e-54 |
MsaG001555 | MsaG033077 | 0.859135 | 9.986839e-63 | 7.513598e-60 |
MsaG001555 | MsaG034263 | 0.826601 | 4.418640e-54 | 1.161926e-51 |
MsaG001555 | MsaG031242 | 0.907653 | 9.587755e-81 | 7.794404e-77 |
MsaG001555 | MsaG030699 | 0.872709 | 5.300639e-67 | 6.895146e-64 |
MsaG001555 | MsaG033554 | 0.847851 | 1.682522e-59 | 8.478696e-57 |
MsaG001555 | MsaG030436 | 0.841149 | 1.049461e-57 | 4.247725e-55 |
MsaG001555 | MsaG036769 | 0.807992 | 6.558340e-50 | 1.067084e-47 |
MsaG001555 | MsaG036646 | 0.903153 | 1.086989e-78 | 6.703043e-75 |
MsaG001555 | MsaG035293 | 0.821645 | 6.358665e-53 | 1.460768e-50 |
MsaG001555 | MsaG037155 | 0.839759 | 2.414430e-57 | 9.353936e-55 |
MsaG001555 | MsaG036687 | 0.824325 | 1.518934e-53 | 3.751294e-51 |
MsaG001555 | MsaG035954 | 0.846663 | 3.552266e-59 | 1.719871e-56 |
MsaG001555 | MsaG039635 | 0.865147 | 1.457292e-64 | 1.384960e-61 |
MsaG001555 | MsaG037111 | 0.801502 | 1.464134e-48 | 2.047935e-46 |
MsaG001555 | MsaG039945 | 0.812034 | 8.921659e-51 | 1.601285e-48 |
MsaG001555 | MsaG035545 | 0.803757 | 5.042991e-49 | 7.428306e-47 |
MsaG001555 | MsaG036725 | 0.857519 | 3.008604e-62 | 2.130997e-59 |
MsaG001555 | MsaG035299 | 0.874761 | 1.084988e-67 | 1.544067e-64 |
MsaG001555 | MsaG039324 | 0.800681 | 2.151535e-48 | 2.954174e-46 |
MsaG001555 | MsaG042416 | 0.814820 | 2.192629e-51 | 4.219330e-49 |
MsaG001555 | MsaG041727 | 0.800033 | 2.910722e-48 | 3.938438e-46 |
MsaG001555 | MsaG043220 | 0.844021 | 1.828047e-58 | 8.110768e-56 |
MsaG001555 | MsaG043492 | 0.810733 | 1.704455e-50 | 2.963165e-48 |
MsaG001555 | MsaG040992 | 0.815786 | 1.340586e-51 | 2.643482e-49 |
MsaG001555 | MsaG043822 | 0.824893 | 1.118371e-53 | 2.805057e-51 |
MsaG001555 | MsaG043047 | 0.815247 | 1.764901e-51 | 3.433130e-49 |
MsaG001555 | MsaG046905 | 0.882887 | 1.524769e-70 | 3.154005e-67 |
MsaG012639 | MsaG001555 | 0.801355 | 1.568716e-48 | 2.186903e-46 |
MsaG012890 | MsaG001555 | 0.817985 | 4.325497e-52 | 9.024905e-50 |
MsaG013333 | MsaG001555 | 0.839097 | 3.579769e-57 | 1.358502e-54 |
MsaG013876 | MsaG001555 | 0.821261 | 7.793344e-53 | 1.772217e-50 |
MsaG014193 | MsaG001555 | 0.819789 | 1.690210e-52 | 3.696529e-50 |
MsaG014214 | MsaG001555 | 0.838403 | 5.399086e-57 | 2.004944e-54 |
MsaG014205 | MsaG001555 | 0.841763 | 7.243646e-58 | 2.989467e-55 |
MsaG014543 | MsaG001555 | 0.814075 | 3.198069e-51 | 6.039944e-49 |
MsaG014555 | MsaG001555 | 0.810756 | 1.684461e-50 | 2.930145e-48 |
MsaG014971 | MsaG001555 | 0.818667 | 3.035785e-52 | 6.446692e-50 |
MsaG015134 | MsaG001555 | 0.807862 | 6.988439e-50 | 1.133520e-47 |
MsaG015145 | MsaG001555 | 0.838163 | 6.221752e-57 | 2.293372e-54 |
MsaG015142 | MsaG001555 | 0.806608 | 1.284545e-49 | 2.022394e-47 |
MsaG015333 | MsaG001555 | 0.862521 | 9.465388e-64 | 8.107456e-61 |
MsaG015721 | MsaG001555 | 0.888141 | 1.674618e-72 | 4.484526e-69 |
MsaG015809 | MsaG001555 | 0.877347 | 1.411904e-68 | 2.255411e-65 |
MsaG015851 | MsaG001555 | 0.804195 | 4.092946e-49 | 6.090451e-47 |
MsaG016247 | MsaG001555 | 0.816091 | 1.146728e-51 | 2.278851e-49 |
MsaG016248 | MsaG001555 | 0.812170 | 8.335044e-51 | 1.500981e-48 |
MsaG016290 | MsaG001555 | 0.835420 | 3.092020e-56 | 1.048838e-53 |
MsaG016304 | MsaG001555 | 0.812800 | 6.078448e-51 | 1.111923e-48 |
MsaG016347 | MsaG001555 | 0.876847 | 2.101609e-68 | 3.281918e-65 |
MsaG016421 | MsaG001555 | 0.823248 | 2.708828e-53 | 6.496940e-51 |
MsaG016550 | MsaG001555 | 0.823278 | 2.665815e-53 | 6.399146e-51 |
MsaG016778 | MsaG001555 | 0.849201 | 7.144781e-60 | 3.768485e-57 |
MsaG016877 | MsaG001555 | 0.808329 | 5.562834e-50 | 9.124511e-48 |
MsaG017066 | MsaG001555 | 0.826767 | 4.035093e-54 | 1.065980e-51 |
MsaG017109 | MsaG001555 | 0.800204 | 2.687557e-48 | 3.650413e-46 |
MsaG017318 | MsaG001555 | 0.806944 | 1.091365e-49 | 1.731823e-47 |
MsaG017200 | MsaG001555 | 0.802482 | 9.229298e-49 | 1.320111e-46 |
MsaG017341 | MsaG001555 | 0.807871 | 6.956207e-50 | 1.128556e-47 |
MsaG017722 | MsaG001555 | 0.804125 | 4.232414e-49 | 6.287774e-47 |
MsaG017800 | MsaG001555 | 0.839205 | 3.356153e-57 | 1.277873e-54 |
MsaG017804 | MsaG001555 | 0.801720 | 1.321933e-48 | 1.858196e-46 |
MsaG017839 | MsaG001555 | 0.805681 | 2.008764e-49 | 3.094032e-47 |
MsaG018025 | MsaG001555 | 0.853152 | 5.547649e-61 | 3.355496e-58 |
MsaG018078 | MsaG001555 | 0.878581 | 5.250907e-69 | 8.875776e-66 |
MsaG018083 | MsaG001555 | 0.820602 | 1.103321e-52 | 2.465459e-50 |
MsaG018249 | MsaG001555 | 0.814283 | 2.878268e-51 | 5.464528e-49 |
MsaG018282 | MsaG001555 | 0.845632 | 6.755479e-59 | 3.160827e-56 |
MsaG018602 | MsaG001555 | 0.811988 | 9.128943e-51 | 1.636638e-48 |
MsaG018608 | MsaG001555 | 0.848235 | 1.320001e-59 | 6.737252e-57 |
MsaG018714 | MsaG001555 | 0.829779 | 7.636192e-55 | 2.196060e-52 |
MsaG018881 | MsaG001555 | 0.830345 | 5.566243e-55 | 1.626892e-52 |
MsaG018897 | MsaG001555 | 0.815745 | 1.368877e-51 | 2.696483e-49 |
MsaG018898 | MsaG001555 | 0.813537 | 4.197070e-51 | 7.820485e-49 |
MsaG019083 | MsaG001555 | 0.802999 | 7.225776e-49 | 1.045872e-46 |
MsaG019092 | MsaG001555 | 0.801690 | 1.340497e-48 | 1.883012e-46 |
MsaG019132 | MsaG001555 | 0.841836 | 6.931471e-58 | 2.867336e-55 |
MsaG019525 | MsaG001555 | 0.810695 | 1.736631e-50 | 3.016273e-48 |
MsaG019656 | MsaG001555 | 0.805374 | 2.327770e-49 | 3.559844e-47 |
MsaG019770 | MsaG001555 | 0.817690 | 5.037150e-52 | 1.042968e-49 |
MsaG019795 | MsaG001555 | 0.809005 | 3.995782e-50 | 6.661898e-48 |
MsaG020005 | MsaG001555 | 0.803572 | 5.507405e-49 | 8.077544e-47 |
MsaG020031 | MsaG001555 | 0.839982 | 2.112783e-57 | 8.243283e-55 |
MsaG020162 | MsaG001555 | 0.827989 | 2.061804e-54 | 5.636606e-52 |
MsaG020266 | MsaG001555 | 0.819750 | 1.725623e-52 | 3.769920e-50 |
MsaG020336 | MsaG001555 | 0.900827 | 1.145655e-77 | 6.154778e-74 |
MsaG020430 | MsaG001555 | 0.821998 | 5.274237e-53 | 1.223056e-50 |
MsaG020497 | MsaG001555 | 0.817371 | 5.940328e-52 | 1.219964e-49 |
MsaG020684 | MsaG001555 | 0.803378 | 6.038713e-49 | 8.817356e-47 |
MsaG020747 | MsaG001555 | 0.812257 | 7.978432e-51 | 1.439872e-48 |
MsaG020713 | MsaG001555 | 0.806045 | 1.685699e-49 | 2.618740e-47 |
MsaG020754 | MsaG001555 | 0.847483 | 2.121875e-59 | 1.056077e-56 |
MsaG020815 | MsaG001555 | 0.841604 | 7.971568e-58 | 3.273407e-55 |
MsaG020838 | MsaG001555 | 0.892619 | 2.987691e-74 | 1.011336e-70 |
MsaG020889 | MsaG001555 | 0.840819 | 1.279752e-57 | 5.125907e-55 |
MsaG021564 | MsaG001555 | 0.808357 | 5.486957e-50 | 9.006137e-48 |
MsaG021683 | MsaG001555 | 0.801638 | 1.373913e-48 | 1.927659e-46 |
MsaG023415 | MsaG001555 | 0.808427 | 5.301709e-50 | 8.716917e-48 |
MsaG023674 | MsaG001555 | 0.850746 | 2.652905e-60 | 1.475202e-57 |
MsaG023894 | MsaG001555 | 0.822639 | 3.749706e-53 | 8.846545e-51 |
MsaG024008 | MsaG001555 | 0.815354 | 1.671012e-51 | 3.259274e-49 |
MsaG024139 | MsaG001555 | 0.800579 | 2.256789e-48 | 3.091514e-46 |
MsaG024303 | MsaG001555 | 0.895267 | 2.536167e-75 | 9.908140e-72 |
MsaG024993 | MsaG001555 | 0.835032 | 3.870714e-56 | 1.297843e-53 |
MsaG025732 | MsaG001555 | 0.808811 | 4.394898e-50 | 7.293015e-48 |
MsaG026487 | MsaG001555 | 0.847907 | 1.624186e-59 | 8.199849e-57 |
MsaG026607 | MsaG001555 | 0.899417 | 4.638848e-77 | 2.293758e-73 |
MsaG026625 | MsaG001555 | 0.809221 | 3.594346e-50 | 6.023474e-48 |
MsaG026719 | MsaG001555 | 0.836574 | 1.580895e-56 | 5.551454e-54 |
MsaG026786 | MsaG001555 | 0.838122 | 6.373624e-57 | 2.346409e-54 |
MsaG027138 | MsaG001555 | 0.913144 | 2.126619e-83 | 2.475911e-79 |
MsaG027163 | MsaG001555 | 0.825687 | 7.269334e-54 | 1.863641e-51 |
MsaG027241 | MsaG001555 | 0.818764 | 2.886653e-52 | 6.145499e-50 |
MsaG027302 | MsaG001555 | 0.809163 | 3.697968e-50 | 6.188720e-48 |
MsaG027514 | MsaG001555 | 0.844174 | 1.664150e-58 | 7.421438e-56 |
MsaG027519 | MsaG001555 | 0.806893 | 1.118710e-49 | 1.773093e-47 |
MsaG027590 | MsaG001555 | 0.833134 | 1.150959e-55 | 3.647859e-53 |
MsaG027591 | MsaG001555 | 0.874545 | 1.283888e-67 | 1.810069e-64 |
MsaG027763 | MsaG001555 | 0.854768 | 1.907274e-61 | 1.221980e-58 |
MsaG027936 | MsaG001555 | 0.851132 | 2.067746e-60 | 1.165277e-57 |
MsaG028119 | MsaG001555 | 0.868416 | 1.341778e-65 | 1.456044e-62 |
MsaG028135 | MsaG001555 | 0.858272 | 1.803631e-62 | 1.313875e-59 |
MsaG028248 | MsaG001555 | 0.847495 | 2.106566e-59 | 1.048853e-56 |
MsaG028277 | MsaG001555 | 0.813407 | 4.480375e-51 | 8.321235e-49 |
MsaG028516 | MsaG001555 | 0.817418 | 5.797205e-52 | 1.192037e-49 |
MsaG028600 | MsaG001555 | 0.808549 | 4.994761e-50 | 8.236462e-48 |
MsaG028900 | MsaG001555 | 0.820255 | 1.323569e-52 | 2.930959e-50 |
MsaG028883 | MsaG001555 | 0.809282 | 3.487317e-50 | 5.852729e-48 |
MsaG029235 | MsaG001555 | 0.846194 | 4.760334e-59 | 2.269182e-56 |
MsaG029370 | MsaG001555 | 0.851038 | 2.197199e-60 | 1.234228e-57 |
MsaG029381 | MsaG001555 | 0.821628 | 6.416667e-53 | 1.473422e-50 |
MsaG029547 | MsaG001555 | 0.824688 | 1.248891e-53 | 3.114912e-51 |
MsaG031088 | MsaG001555 | 0.817478 | 5.620768e-52 | 1.157540e-49 |
MsaG031167 | MsaG001555 | 0.801399 | 1.537028e-48 | 2.144869e-46 |
MsaG031410 | MsaG001555 | 0.815666 | 1.425380e-51 | 2.802225e-49 |
MsaG031480 | MsaG001555 | 0.811970 | 9.210832e-51 | 1.650620e-48 |
MsaG032702 | MsaG001555 | 0.839900 | 2.219106e-57 | 8.636041e-55 |
MsaG032839 | MsaG001555 | 0.822096 | 5.007828e-53 | 1.164314e-50 |
MsaG033495 | MsaG001555 | 0.830150 | 6.209711e-55 | 1.804861e-52 |
MsaG033534 | MsaG001555 | 0.806129 | 1.618531e-49 | 2.519464e-47 |
MsaG033991 | MsaG001555 | 0.822975 | 3.134264e-53 | 7.462143e-51 |
MsaG033995 | MsaG001555 | 0.862131 | 1.245818e-63 | 1.050857e-60 |
MsaG034109 | MsaG001555 | 0.849342 | 6.530249e-60 | 3.460779e-57 |
MsaG034326 | MsaG001555 | 0.849608 | 5.510648e-60 | 2.947361e-57 |
MsaG034426 | MsaG001555 | 0.883877 | 6.626899e-71 | 1.437604e-67 |
MsaG034794 | MsaG001555 | 0.821520 | 6.794491e-53 | 1.555678e-50 |
MsaG034824 | MsaG001555 | 0.812422 | 7.346895e-51 | 1.331382e-48 |
MsaG035363 | MsaG001555 | 0.869498 | 6.008976e-66 | 6.817936e-63 |
MsaG035513 | MsaG001555 | 0.840866 | 1.243910e-57 | 4.989721e-55 |
MsaG035539 | MsaG001555 | 0.844549 | 1.321091e-58 | 5.964059e-56 |
MsaG035659 | MsaG001555 | 0.805947 | 1.767547e-49 | 2.739532e-47 |
MsaG036045 | MsaG001555 | 0.843187 | 3.047125e-58 | 1.316286e-55 |
MsaG036046 | MsaG001555 | 0.846423 | 4.126281e-59 | 1.981821e-56 |
MsaG036417 | MsaG001555 | 0.844969 | 1.019039e-58 | 4.665383e-56 |
MsaG036716 | MsaG001555 | 0.826627 | 4.354589e-54 | 1.145919e-51 |
MsaG036720 | MsaG001555 | 0.852770 | 7.125019e-61 | 4.252197e-58 |
MsaG037871 | MsaG001555 | 0.817702 | 5.007302e-52 | 1.037095e-49 |
MsaG038007 | MsaG001555 | 0.828269 | 1.766439e-54 | 4.867111e-52 |
MsaG038422 | MsaG001555 | 0.893983 | 8.455564e-75 | 3.082103e-71 |
MsaG038518 | MsaG001555 | 0.817564 | 5.377314e-52 | 1.109823e-49 |
MsaG039468 | MsaG001555 | 0.844679 | 1.219032e-58 | 5.527222e-56 |
MsaG040095 | MsaG001555 | 0.811963 | 9.240254e-51 | 1.655639e-48 |
MsaG040713 | MsaG001555 | 0.861135 | 2.501944e-63 | 2.031049e-60 |
MsaG040725 | MsaG001555 | 0.816316 | 1.022039e-51 | 2.042780e-49 |
MsaG041202 | MsaG001555 | 0.806050 | 1.681215e-49 | 2.612161e-47 |
MsaG041237 | MsaG001555 | 0.840851 | 1.255424e-57 | 5.033415e-55 |
MsaG041721 | MsaG001555 | 0.852208 | 1.028092e-60 | 6.015845e-58 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG001555 | MtrunA17_Chr1g0164761 | 88.793 | 580 | 47 | 1 | 1 | 580 | 1 | 562 | 0.0 | 1073 |
MsaG001555 | MtrunA17_Chr1g0164731 | 78.322 | 572 | 96 | 3 | 2 | 571 | 39 | 584 | 0.0 | 901 |
MsaG001555 | MtrunA17_Chr5g0410721 | 52.673 | 505 | 218 | 4 | 2 | 493 | 83 | 579 | 0.0 | 557 |
MsaG001555 | MtrunA17_Chr3g0116441 | 37.466 | 363 | 185 | 9 | 8 | 346 | 18 | 362 | 3.22e-66 | 234 |
MsaG001555 | MtrunA17_Chr8g0380981 | 31.455 | 550 | 290 | 14 | 4 | 476 | 39 | 578 | 2.72e-58 | 210 |
MsaG001555 | MtrunA17_Chr7g0214951 | 80.000 | 120 | 6 | 2 | 181 | 299 | 99 | 201 | 1.09e-57 | 192 |
MsaG001555 | MtrunA17_Chr1g0189211 | 30.667 | 525 | 278 | 13 | 6 | 454 | 148 | 662 | 1.67e-54 | 199 |
MsaG001555 | MtrunA17_Chr1g0199511 | 44.681 | 188 | 100 | 1 | 152 | 339 | 291 | 474 | 1.47e-52 | 194 |
MsaG001555 | MtrunA17_Chr5g0397501 | 40.484 | 289 | 135 | 9 | 88 | 354 | 303 | 576 | 2.12e-51 | 191 |
MsaG001555 | MtrunA17_Chr2g0303101 | 34.509 | 397 | 222 | 14 | 134 | 502 | 232 | 618 | 3.05e-48 | 181 |
MsaG001555 | MtrunA17_Chr7g0214941 | 75.676 | 74 | 18 | 0 | 468 | 541 | 1 | 74 | 1.12e-29 | 111 |
MsaG001555 | MtrunA17_Chr7g0261401 | 31.447 | 318 | 188 | 10 | 156 | 455 | 338 | 643 | 2.81e-29 | 123 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG001555 | AT5G46910.1 | 54.105 | 475 | 215 | 3 | 7 | 479 | 102 | 575 | 0.0 | 546 |
MsaG001555 | AT5G46910.2 | 54.701 | 468 | 210 | 2 | 7 | 473 | 102 | 568 | 0.0 | 546 |
MsaG001555 | AT2G34880.1 | 31.203 | 532 | 286 | 14 | 7 | 470 | 60 | 579 | 4.82e-59 | 211 |
MsaG001555 | AT3G48430.1 | 34.584 | 373 | 194 | 9 | 8 | 339 | 20 | 383 | 6.42e-59 | 213 |
MsaG001555 | AT1G63490.1 | 43.939 | 264 | 122 | 6 | 94 | 340 | 53 | 307 | 1.40e-57 | 209 |
MsaG001555 | AT1G63490.4 | 43.939 | 264 | 122 | 6 | 94 | 340 | 306 | 560 | 1.99e-57 | 209 |
MsaG001555 | AT1G63490.2 | 43.939 | 264 | 122 | 6 | 94 | 340 | 306 | 560 | 2.07e-57 | 209 |
MsaG001555 | AT1G30810.3 | 29.444 | 540 | 290 | 15 | 4 | 466 | 55 | 580 | 2.15e-57 | 206 |
MsaG001555 | AT1G30810.2 | 29.444 | 540 | 290 | 15 | 4 | 466 | 55 | 580 | 2.15e-57 | 206 |
MsaG001555 | AT1G30810.1 | 29.444 | 540 | 290 | 15 | 4 | 466 | 55 | 580 | 2.15e-57 | 206 |
MsaG001555 | AT4G20400.1 | 27.074 | 639 | 360 | 17 | 4 | 562 | 52 | 664 | 8.47e-56 | 203 |
MsaG001555 | AT4G20400.2 | 27.113 | 627 | 351 | 17 | 16 | 562 | 7 | 607 | 2.84e-52 | 192 |
MsaG001555 | AT5G04240.1 | 46.277 | 188 | 97 | 1 | 152 | 339 | 259 | 442 | 6.51e-52 | 192 |
MsaG001555 | AT1G08620.2 | 40.000 | 240 | 124 | 4 | 117 | 343 | 313 | 545 | 5.51e-45 | 172 |
MsaG001555 | AT1G08620.4 | 40.000 | 240 | 124 | 4 | 117 | 343 | 313 | 545 | 5.51e-45 | 172 |
MsaG001555 | AT1G08620.1 | 40.000 | 240 | 124 | 4 | 117 | 343 | 313 | 545 | 5.51e-45 | 172 |
MsaG001555 | AT1G08620.3 | 40.000 | 240 | 124 | 4 | 117 | 343 | 327 | 559 | 5.55e-45 | 172 |
MsaG001555 | AT2G38950.1 | 25.198 | 631 | 365 | 20 | 2 | 550 | 102 | 707 | 1.22e-34 | 139 |
MsaG001555 | AT1G63490.3 | 55.172 | 87 | 39 | 0 | 254 | 340 | 15 | 101 | 4.45e-25 | 110 |
Find 84 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACACAATTGTACAGCCTCTT+AGG | 0.195974 | 1:+22292664 | MsaT001555.1:CDS |
TGTTCTGATGGATAATAAAT+TGG | 0.204032 | 1:-22292114 | None:intergenic |
TTTCACATACCTTGTGTTCT+TGG | 0.206416 | 1:-22294982 | None:intergenic |
GATGCATTCATTTATGTTAT+AGG | 0.249252 | 1:-22294960 | None:intergenic |
TTCTTTACCGCAAAATCTAT+TGG | 0.253886 | 1:-22292876 | None:intergenic |
GCTCCTGAGGCTTCTAAATA+TGG | 0.264118 | 1:+22292174 | MsaT001555.1:CDS |
TGTCTTAACGGAAGAGAAAA+AGG | 0.267528 | 1:+22292629 | MsaT001555.1:CDS |
GAGAAAGGAACAGTTGAATA+TGG | 0.277961 | 1:+22292953 | MsaT001555.1:CDS |
TCCTGCAGTATCTTCCCTTT+TGG | 0.292966 | 1:+22295395 | MsaT001555.1:CDS |
AATCCAGCATGATATGAATT+AGG | 0.298533 | 1:-22293766 | None:intergenic |
AGTTCCTCATATGGAATTAT+AGG | 0.316333 | 1:-22294424 | None:intergenic |
TTACTATGGAAAAGGCAAAT+TGG | 0.326117 | 1:-22294706 | None:intergenic |
ATAAAGGACTCGTTGTCTTT+TGG | 0.343992 | 1:-22295334 | None:intergenic |
TTACAAAGAAGTTCCTCATA+TGG | 0.344918 | 1:-22294433 | None:intergenic |
GCTGGATCCGACGTGTCTTC+AGG | 0.355814 | 1:-22294508 | None:intergenic |
AGCTCTTCAAATACATCATT+AGG | 0.370354 | 1:+22294610 | MsaT001555.1:CDS |
TGACATGCAGCCTCTGCAAT+AGG | 0.375602 | 1:+22294638 | MsaT001555.1:CDS |
AACAAGCAATTTCAATTTGA+AGG | 0.380018 | 1:+22293027 | MsaT001555.1:CDS |
TAAACTTTGCTATTGGTGAT+TGG | 0.380389 | 1:+22294350 | MsaT001555.1:CDS |
GACAAAAGAAGCAGGATTAG+AGG | 0.392437 | 1:-22292610 | None:intergenic |
TTGGTGATTGGTTTCCACTT+GGG | 0.409363 | 1:+22294362 | MsaT001555.1:CDS |
ACTGAAAGCAGAATAATAAC+TGG | 0.419321 | 1:+22295154 | MsaT001555.1:intron |
TTTGATTTGAAAACCCTAAG+AGG | 0.423006 | 1:-22292678 | None:intergenic |
CTGATCCTATGCTTTACATT+GGG | 0.424948 | 1:+22293358 | MsaT001555.1:CDS |
TCAATTTGAAAAGACTGTCT+TGG | 0.425142 | 1:+22293582 | MsaT001555.1:CDS |
CACAATTGTACAGCCTCTTA+GGG | 0.435355 | 1:+22292665 | MsaT001555.1:CDS |
TGAGACATCGCTATCGCGCT+TGG | 0.436728 | 1:+22294567 | MsaT001555.1:CDS |
CTTGTTCCAAGCTTATCATC+AGG | 0.440827 | 1:-22293010 | None:intergenic |
GAAGCTGTAAACTTTGCTAT+TGG | 0.453482 | 1:+22294343 | MsaT001555.1:CDS |
GCTACCTATAATTCCATATG+AGG | 0.458631 | 1:+22294420 | MsaT001555.1:CDS |
TGGTGATTGGTTTCCACTTG+GGG | 0.467102 | 1:+22294363 | MsaT001555.1:CDS |
TTTCTGTCAAGTAAACGTAA+TGG | 0.468536 | 1:-22293236 | None:intergenic |
GAAATAATACATGGAGAGAA+AGG | 0.474488 | 1:+22292938 | MsaT001555.1:CDS |
TGCTCAAACTCTTGTTCTGA+TGG | 0.476367 | 1:-22292126 | None:intergenic |
GTGCCACAAAAGTGTTTATG+TGG | 0.479205 | 1:+22294824 | MsaT001555.1:CDS |
TTACCATATTTAGAAGCCTC+AGG | 0.481047 | 1:-22292177 | None:intergenic |
TTTCCTAATTCATATCATGC+TGG | 0.481919 | 1:+22293763 | MsaT001555.1:CDS |
TCGAGGTCTTACTATGGAAA+AGG | 0.482942 | 1:-22294714 | None:intergenic |
ACATAATGTGCCGGTTTACA+AGG | 0.487938 | 1:+22293708 | MsaT001555.1:CDS |
TTGAAGATCACTATTTGTAC+AGG | 0.488775 | 1:+22293409 | MsaT001555.1:CDS |
ATTGGTGATTGGTTTCCACT+TGG | 0.491227 | 1:+22294361 | MsaT001555.1:CDS |
GCAGGATTAGAGGCAGTGAT+TGG | 0.491790 | 1:-22292600 | None:intergenic |
ATTTGAAGCTCTTGCAAACA+AGG | 0.496352 | 1:+22292847 | MsaT001555.1:CDS |
GACATGCAGCCTCTGCAATA+GGG | 0.498995 | 1:+22294639 | MsaT001555.1:CDS |
ATCATCAGGATCACTTGAAA+AGG | 0.501772 | 1:-22292996 | None:intergenic |
AAGAAAGATAGTACAATAGC+TGG | 0.506340 | 1:-22294526 | None:intergenic |
TACAACTCCTCAAAAGATAG+AGG | 0.507371 | 1:+22294472 | MsaT001555.1:CDS |
GGTGGAAATAAAACTTGGTA+TGG | 0.514584 | 1:+22293538 | MsaT001555.1:CDS |
ACTGATCCTATGCTTTACAT+TGG | 0.515442 | 1:+22293357 | MsaT001555.1:CDS |
AGTGATCCTGATGATAAGCT+TGG | 0.516084 | 1:+22293004 | MsaT001555.1:CDS |
TTAACAGAACATGGAGAGAA+TGG | 0.517335 | 1:+22293628 | MsaT001555.1:CDS |
TGCTATTCAGTATGTTTGCA+TGG | 0.518171 | 1:+22293382 | MsaT001555.1:CDS |
AATTGAGAGGCAGCAGAGCT+AGG | 0.520627 | 1:-22293565 | None:intergenic |
TTACAAGGCGATGCAAAAGC+CGG | 0.522105 | 1:+22293723 | MsaT001555.1:CDS |
TCCGTTAAGACAAAAGAAGC+AGG | 0.523048 | 1:-22292618 | None:intergenic |
ACTCAGGTGGAAATAAAACT+TGG | 0.530514 | 1:+22293533 | MsaT001555.1:CDS |
TTATGTTCTAACAAGACATC+AGG | 0.538881 | 1:-22293691 | None:intergenic |
AGAAGAACTGTTAACTCGCT+AGG | 0.543521 | 1:+22295195 | MsaT001555.1:CDS |
TATGCAGAAAATTGCTCCTG+AGG | 0.544690 | 1:+22292161 | MsaT001555.1:CDS |
CTTGTTAGAACATAATGTGC+CGG | 0.547471 | 1:+22293699 | MsaT001555.1:CDS |
CAAGACATCAGGAGAGAACA+TGG | 0.563327 | 1:-22293680 | None:intergenic |
TACAAGGCGATGCAAAAGCC+GGG | 0.563332 | 1:+22293724 | MsaT001555.1:CDS |
ATAAATTATCATCACTCAGG+TGG | 0.565750 | 1:+22293520 | MsaT001555.1:CDS |
AATGGAGACTGTGGCAGCCG+CGG | 0.576119 | 1:-22293218 | None:intergenic |
ATGGAAAAGGCAAATTGGAT+CGG | 0.581592 | 1:-22294701 | None:intergenic |
AAGGTGATGACAAACTCTCC+CGG | 0.582876 | 1:-22293742 | None:intergenic |
TTCTGGCATGAAATAATACA+TGG | 0.588144 | 1:+22292929 | MsaT001555.1:CDS |
GCCAAAAGGGAAGATACTGC+AGG | 0.591239 | 1:-22295396 | None:intergenic |
AGTATAAATTATCATCACTC+AGG | 0.598943 | 1:+22293517 | MsaT001555.1:intron |
AACAAAATCTTAACAGAACA+TGG | 0.599486 | 1:+22293619 | MsaT001555.1:CDS |
TCACTAGCTGCAGCCCCAAG+TGG | 0.606035 | 1:-22294376 | None:intergenic |
AGCATCCCAATGTAAAGCAT+AGG | 0.618659 | 1:-22293363 | None:intergenic |
TATCATGCTGGATTTAGTCA+CGG | 0.625895 | 1:+22293775 | MsaT001555.1:CDS |
GAGAACATACTGTATTCAAG+AGG | 0.632379 | 1:+22294849 | MsaT001555.1:CDS |
AGCATGATATGAATTAGGAA+AGG | 0.636839 | 1:-22293761 | None:intergenic |
TGCCACAAAAGTGTTTATGT+GGG | 0.637266 | 1:+22294825 | MsaT001555.1:CDS |
TGAATATGGAGTCAATGTTG+AGG | 0.637328 | 1:+22292967 | MsaT001555.1:CDS |
GCAGAATAATAACTGGCATG+AGG | 0.639560 | 1:+22295161 | MsaT001555.1:intron |
ATTCAAGAGGAATGACATGT+CGG | 0.643125 | 1:+22294862 | MsaT001555.1:CDS |
CATAACAATCCCTATTGCAG+AGG | 0.648673 | 1:-22294648 | None:intergenic |
TGAGAAAACATGAATCAGAA+CGG | 0.651996 | 1:+22295361 | MsaT001555.1:CDS |
TGAATGCATCCAAGAACACA+AGG | 0.658928 | 1:+22294973 | MsaT001555.1:CDS |
AGTAAACGTAATGGAGACTG+TGG | 0.682153 | 1:-22293227 | None:intergenic |
AATCAAACCTGAAGACACGT+CGG | 0.715406 | 1:+22294501 | MsaT001555.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 22292090 | 22295440 | 22292090 | ID=MsaG001555 |
Chr1 | mRNA | 22292090 | 22295440 | 22292090 | ID=MsaT001555.1;Parent=MsaG001555 |
Chr1 | exon | 22292090 | 22292195 | 22292090 | ID=MsaT001555.1.exon1;Parent=MsaT001555.1 |
Chr1 | CDS | 22292090 | 22292195 | 22292090 | ID=cds.MsaT001555.1;Parent=MsaT001555.1 |
Chr1 | exon | 22292580 | 22292736 | 22292580 | ID=MsaT001555.1.exon2;Parent=MsaT001555.1 |
Chr1 | CDS | 22292580 | 22292736 | 22292580 | ID=cds.MsaT001555.1;Parent=MsaT001555.1 |
Chr1 | exon | 22292829 | 22293048 | 22292829 | ID=MsaT001555.1.exon3;Parent=MsaT001555.1 |
Chr1 | CDS | 22292829 | 22293048 | 22292829 | ID=cds.MsaT001555.1;Parent=MsaT001555.1 |
Chr1 | exon | 22293212 | 22293265 | 22293212 | ID=MsaT001555.1.exon4;Parent=MsaT001555.1 |
Chr1 | CDS | 22293212 | 22293265 | 22293212 | ID=cds.MsaT001555.1;Parent=MsaT001555.1 |
Chr1 | exon | 22293351 | 22293430 | 22293351 | ID=MsaT001555.1.exon5;Parent=MsaT001555.1 |
Chr1 | CDS | 22293351 | 22293430 | 22293351 | ID=cds.MsaT001555.1;Parent=MsaT001555.1 |
Chr1 | exon | 22293519 | 22293796 | 22293519 | ID=MsaT001555.1.exon6;Parent=MsaT001555.1 |
Chr1 | CDS | 22293519 | 22293796 | 22293519 | ID=cds.MsaT001555.1;Parent=MsaT001555.1 |
Chr1 | exon | 22294329 | 22294724 | 22294329 | ID=MsaT001555.1.exon7;Parent=MsaT001555.1 |
Chr1 | CDS | 22294329 | 22294724 | 22294329 | ID=cds.MsaT001555.1;Parent=MsaT001555.1 |
Chr1 | exon | 22294819 | 22294994 | 22294819 | ID=MsaT001555.1.exon8;Parent=MsaT001555.1 |
Chr1 | CDS | 22294819 | 22294994 | 22294819 | ID=cds.MsaT001555.1;Parent=MsaT001555.1 |
Chr1 | exon | 22295165 | 22295440 | 22295165 | ID=MsaT001555.1.exon9;Parent=MsaT001555.1 |
Chr1 | CDS | 22295165 | 22295440 | 22295165 | ID=cds.MsaT001555.1;Parent=MsaT001555.1 |
Gene Sequence |
Protein sequence |