AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG001790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG001790 MtrunA17_Chr1g0168031 96.447 1154 30 3 1 1144 1 1153 0.0 2288
MsaG001790 MtrunA17_Chr2g0320751 46.477 951 417 15 246 1144 106 1016 0.0 865
MsaG001790 MtrunA17_Chr7g0255821 34.751 682 356 16 454 1123 193 797 8.94e-119 387
MsaG001790 MtrunA17_Chr1g0212331 31.818 770 330 18 525 1143 313 1038 2.86e-107 361
MsaG001790 MtrunA17_Chr2g0281601 34.106 733 361 18 525 1143 577 1301 3.25e-103 354
MsaG001790 MtrunA17_Chr4g0024921 33.455 550 251 17 647 1143 446 933 1.77e-81 286
MsaG001790 MtrunA17_Chr4g0024921 34.586 133 66 3 518 643 253 371 5.47e-14 77.0
MsaG001790 MtrunA17_Chr5g0428401 29.333 300 158 10 581 831 488 782 4.90e-31 132
MsaG001790 MtrunA17_Chr5g0428401 32.727 165 94 4 994 1144 1493 1654 5.87e-18 90.1
MsaG001790 MtrunA17_Chr3g0083491 24.272 618 322 20 579 1111 728 1284 2.72e-30 130
MsaG001790 MtrunA17_Chr2g0286291 29.545 308 163 9 526 827 212 471 3.56e-28 123
MsaG001790 MtrunA17_Chr2g0286291 42.063 126 72 1 994 1118 508 633 3.34e-20 97.4
MsaG001790 MtrunA17_Chr4g0066741 28.165 316 179 7 526 838 209 479 9.02e-28 122
MsaG001790 MtrunA17_Chr4g0066741 40.580 138 81 1 982 1118 493 630 3.79e-20 97.1
MsaG001790 MtrunA17_Chr5g0394201 27.647 340 179 11 526 847 384 674 6.97e-26 115
MsaG001790 MtrunA17_Chr5g0394201 37.324 142 86 2 981 1121 675 814 3.01e-18 90.9
MsaG001790 MtrunA17_Chr1g0205891 28.963 328 168 12 526 836 397 676 7.46e-26 115
MsaG001790 MtrunA17_Chr1g0205891 37.324 142 86 2 981 1121 689 828 5.42e-18 90.1
MsaG001790 MtrunA17_Chr1g0175191 28.616 318 163 10 525 827 541 809 1.09e-24 112
MsaG001790 MtrunA17_Chr1g0175191 35.200 125 79 1 996 1120 1080 1202 2.79e-20 97.8
MsaG001790 MtrunA17_Chr7g0257101 27.864 323 170 13 526 827 599 879 7.89e-24 109
MsaG001790 MtrunA17_Chr7g0257101 33.333 162 102 2 973 1129 1188 1348 8.15e-21 99.8
MsaG001790 MtrunA17_Chr5g0393461 35.795 176 106 3 976 1144 537 712 1.68e-23 107
MsaG001790 MtrunA17_Chr5g0393461 25.145 346 190 12 525 843 210 513 2.03e-12 72.0
MsaG001790 MtrunA17_Chr1g0163011 37.748 151 93 1 976 1126 569 718 1.56e-22 104
MsaG001790 MtrunA17_Chr1g0163011 27.841 352 176 14 525 847 216 518 2.25e-16 84.3
MsaG001790 MtrunA17_Chr5g0442141 26.183 317 176 9 527 831 639 909 2.52e-22 104
MsaG001790 MtrunA17_Chr5g0442141 35.714 126 78 2 998 1122 953 1076 3.90e-17 87.4
MsaG001790 MtrunA17_Chr1g0183681 36.364 154 97 1 991 1143 748 901 7.74e-22 102
MsaG001790 MtrunA17_Chr3g0137091 32.164 171 112 2 973 1139 606 776 2.81e-21 100
MsaG001790 MtrunA17_Chr3g0137091 23.780 328 175 11 527 828 311 589 1.90e-17 88.6
MsaG001790 MtrunA17_Chr5g0403921 34.868 152 98 1 971 1121 499 650 3.97e-21 99.8
MsaG001790 MtrunA17_Chr5g0403921 24.781 343 184 12 521 837 200 494 4.03e-18 90.1
MsaG001790 MtrunA17_Chr4g0066651 28.571 322 162 12 526 827 1010 1283 4.31e-21 100
MsaG001790 MtrunA17_Chr4g0066651 36.957 138 86 1 991 1127 1321 1458 2.73e-19 94.7
MsaG001790 MtrunA17_Chr4g0040301 37.594 133 83 0 995 1127 397 529 4.92e-21 99.4
MsaG001790 MtrunA17_Chr4g0040301 28.814 236 126 9 533 752 18 227 9.07e-17 85.9
MsaG001790 MtrunA17_Chr3g0095091 24.528 318 180 8 527 831 593 863 8.66e-21 99.4
MsaG001790 MtrunA17_Chr3g0095091 34.921 126 79 2 998 1122 907 1030 4.27e-17 87.4
MsaG001790 MtrunA17_Chr4g0017211 34.091 132 84 1 987 1115 1821 1952 2.46e-20 98.2
MsaG001790 MtrunA17_Chr4g0017211 24.377 361 217 8 495 831 1440 1768 1.29e-18 92.4
MsaG001790 MtrunA17_Chr4g0052341 25.697 323 176 12 523 828 763 1038 3.68e-20 97.4
MsaG001790 MtrunA17_Chr4g0052341 37.500 128 75 3 998 1122 1080 1205 7.83e-18 90.1
MsaG001790 MtrunA17_Chr8g0384531 33.784 148 97 1 998 1144 760 907 7.00e-20 96.3
MsaG001790 MtrunA17_Chr1g0190381 33.158 190 111 4 969 1143 180 368 2.59e-19 93.2
MsaG001790 MtrunA17_Chr8g0348721 29.261 352 169 14 526 848 1008 1308 2.05e-18 92.0
MsaG001790 MtrunA17_Chr8g0348721 42.157 102 58 1 998 1098 1333 1434 2.43e-15 81.6
MsaG001790 MtrunA17_Chr7g0248031 29.023 348 176 12 526 848 1015 1316 4.59e-18 90.9
MsaG001790 MtrunA17_Chr7g0248031 37.500 136 80 3 998 1131 1341 1473 4.41e-16 84.3
MsaG001790 MtrunA17_Chr2g0320781 36.538 156 92 3 972 1121 88 242 4.44e-17 82.0
MsaG001790 MtrunA17_Chr7g0225791 36.538 156 92 3 972 1121 1081 1235 1.36e-16 85.5
MsaG001790 MtrunA17_Chr7g0231521 27.419 186 122 2 958 1131 266 450 2.12e-16 84.7
MsaG001790 MtrunA17_Chr4g0047081 36.538 156 92 3 972 1121 1031 1185 5.25e-16 83.6
MsaG001790 MtrunA17_Chr7g0233001 35.849 159 95 3 969 1121 313 470 6.31e-16 82.4
MsaG001790 MtrunA17_Chr7g0232121 26.882 186 123 2 958 1131 345 529 1.15e-15 82.4
MsaG001790 MtrunA17_Chr7g0232121 21.914 324 191 10 527 827 61 345 6.23e-11 67.0
MsaG001790 MtrunA17_Chr4g0069451 31.944 144 95 2 996 1138 488 629 1.88e-15 81.3
MsaG001790 MtrunA17_Chr7g0232991 32.168 143 92 2 994 1131 477 619 1.72e-13 75.1
MsaG001790 MtrunA17_Chr7g0232971 33.582 134 82 2 995 1121 1114 1247 4.19e-13 74.3
MsaG001790 MtrunA17_Chr2g0296421 34.615 130 80 2 995 1119 865 994 1.20e-12 72.8
MsaG001790 MtrunA17_Chr7g0233021 35.075 134 79 4 994 1121 1050 1181 2.62e-12 71.6
MsaG001790 MtrunA17_Chr7g0233031 35.374 147 81 6 994 1129 1062 1205 4.22e-12 70.9
MsaG001790 MtrunA17_Chr8g0352361 32.414 145 93 2 980 1119 701 845 4.78e-12 70.5
MsaG001790 MtrunA17_Chr7g0224051 30.612 147 94 4 969 1109 911 1055 4.87e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG001790 AT5G43530.1 57.428 1003 357 14 161 1143 324 1276 0.0 1142
MsaG001790 AT5G22750.1 48.686 951 405 17 246 1144 110 1029 0.0 889
MsaG001790 AT5G05130.1 32.832 731 382 19 452 1144 221 880 3.04e-111 368
MsaG001790 AT1G50410.2 31.034 783 324 17 525 1143 249 979 3.23e-102 346
MsaG001790 AT1G50410.1 31.034 783 324 17 525 1143 249 979 3.23e-102 346
MsaG001790 AT1G50410.3 31.034 783 324 17 525 1143 249 979 3.23e-102 346
MsaG001790 AT3G20010.2 31.559 789 323 19 525 1143 13 754 1.37e-100 336
MsaG001790 AT3G20010.3 31.559 789 323 19 525 1143 38 779 3.16e-100 335
MsaG001790 AT1G61140.3 31.793 736 347 18 525 1143 421 1118 2.97e-98 338
MsaG001790 AT3G20010.1 31.559 789 323 19 525 1143 304 1045 1.20e-97 335
MsaG001790 AT3G20010.5 31.559 789 323 19 525 1143 304 1045 1.20e-97 335
MsaG001790 AT3G20010.7 31.559 789 323 19 525 1143 304 1045 1.20e-97 335
MsaG001790 AT1G61140.1 31.793 736 347 18 525 1143 579 1276 1.83e-97 338
MsaG001790 AT3G16600.1 31.370 730 312 22 424 1126 20 587 1.11e-83 286
MsaG001790 AT1G05120.1 31.826 553 261 12 645 1144 343 832 3.57e-81 284
MsaG001790 AT1G05120.1 33.577 137 63 3 521 655 155 265 4.34e-15 80.9
MsaG001790 AT1G05120.2 31.826 553 261 12 645 1144 386 875 2.10e-80 283
MsaG001790 AT1G05120.2 33.577 137 63 3 521 655 198 308 4.34e-15 80.9
MsaG001790 AT1G11100.5 31.608 715 338 18 525 1143 422 1081 5.39e-80 285
MsaG001790 AT1G11100.1 31.608 715 338 18 525 1143 565 1224 1.78e-79 285
MsaG001790 AT1G11100.3 30.040 759 336 19 525 1143 422 1125 3.51e-75 271
MsaG001790 AT1G11100.2 30.040 759 336 19 525 1143 564 1267 8.31e-75 271
MsaG001790 AT1G50410.4 28.213 677 274 16 525 1041 249 873 1.35e-66 243
MsaG001790 AT3G20010.4 28.947 684 273 18 525 1042 304 940 2.68e-63 234
MsaG001790 AT3G20010.6 28.947 684 273 18 525 1042 304 940 2.68e-63 234
MsaG001790 AT3G20010.8 28.947 684 273 18 525 1042 304 940 2.68e-63 234
MsaG001790 AT1G11100.4 32.231 484 218 11 525 946 565 1000 5.10e-58 219
MsaG001790 AT1G11100.4 49.673 153 73 2 995 1143 1116 1268 1.41e-37 154
MsaG001790 AT1G61140.2 32.840 405 189 8 525 850 586 986 5.63e-56 212
MsaG001790 AT1G02670.4 32.402 358 177 6 518 840 137 464 1.58e-52 194
MsaG001790 AT1G02670.6 32.402 358 177 6 518 840 110 437 6.27e-52 195
MsaG001790 AT1G02670.6 50.000 152 73 1 996 1144 512 663 1.80e-36 148
MsaG001790 AT1G02670.5 32.402 358 177 6 518 840 110 437 7.79e-52 194
MsaG001790 AT1G02670.5 58.763 97 40 0 996 1092 512 608 1.86e-28 122
MsaG001790 AT1G02670.2 32.402 358 177 6 518 840 137 464 1.65e-51 193
MsaG001790 AT1G02670.2 58.763 97 40 0 996 1092 539 635 1.70e-28 123
MsaG001790 AT1G02670.3 32.402 358 177 6 518 840 137 464 1.67e-51 194
MsaG001790 AT1G02670.3 50.000 152 73 1 996 1144 539 690 1.97e-36 148
MsaG001790 AT1G02670.7 31.437 334 189 6 518 840 137 441 8.94e-42 164
MsaG001790 AT1G02670.7 50.000 152 73 1 996 1144 516 667 1.53e-36 148
MsaG001790 AT1G02670.1 31.437 334 189 6 518 840 148 452 8.99e-42 164
MsaG001790 AT1G02670.1 50.000 152 73 1 996 1144 527 678 1.63e-36 148
MsaG001790 AT2G40770.2 30.479 292 158 8 581 831 500 787 8.85e-32 135
MsaG001790 AT2G40770.2 29.213 267 151 7 908 1142 1344 1604 9.69e-20 96.7
MsaG001790 AT2G40770.1 30.479 292 158 8 581 831 500 787 8.85e-32 135
MsaG001790 AT2G40770.1 29.213 267 151 7 908 1142 1344 1604 9.69e-20 96.7
MsaG001790 AT2G40770.3 30.479 292 158 8 581 831 500 787 8.85e-32 135
MsaG001790 AT2G40770.3 29.213 267 151 7 908 1142 1344 1604 9.69e-20 96.7
MsaG001790 AT3G06400.2 28.571 308 166 9 526 827 210 469 2.89e-28 124
MsaG001790 AT3G06400.2 40.476 126 74 1 994 1118 506 631 1.00e-19 96.3
MsaG001790 AT3G06400.1 28.571 308 166 9 526 827 210 469 2.96e-28 124
MsaG001790 AT3G06400.1 40.476 126 74 1 994 1118 506 631 1.04e-19 96.3
MsaG001790 AT3G06400.3 28.571 308 166 9 526 827 210 469 2.97e-28 124
MsaG001790 AT3G06400.3 40.476 126 74 1 994 1118 506 631 1.06e-19 96.3
MsaG001790 AT3G06010.1 28.863 343 172 13 526 847 424 715 6.29e-28 122
MsaG001790 AT3G06010.1 37.333 150 91 2 973 1121 708 855 4.24e-18 90.9
MsaG001790 AT5G18620.1 27.619 315 180 7 526 837 215 484 7.63e-28 122
MsaG001790 AT5G18620.1 40.476 126 74 1 994 1118 511 636 1.31e-19 95.9
MsaG001790 AT5G18620.2 27.619 315 180 7 526 837 215 484 7.71e-28 122
MsaG001790 AT5G18620.2 40.476 126 74 1 994 1118 511 636 1.30e-19 95.9
MsaG001790 AT3G19210.3 39.205 176 100 3 976 1144 533 708 1.05e-27 121
MsaG001790 AT3G19210.2 39.205 176 100 3 976 1144 531 706 1.32e-27 121
MsaG001790 AT3G19210.1 39.205 176 100 3 976 1144 533 708 1.55e-27 121
MsaG001790 AT5G19310.2 27.697 343 175 13 526 847 143 433 8.71e-26 115
MsaG001790 AT5G19310.2 38.732 142 84 2 981 1121 434 573 1.24e-18 92.4
MsaG001790 AT5G19310.1 27.697 343 175 13 526 847 407 697 1.59e-25 115
MsaG001790 AT5G19310.1 38.732 142 84 2 981 1121 698 837 1.73e-18 92.0
MsaG001790 AT3G12810.2 27.619 315 170 8 525 827 552 820 1.53e-24 112
MsaG001790 AT3G12810.2 30.872 149 103 0 991 1139 1084 1232 1.76e-20 99.0
MsaG001790 AT3G12810.1 27.619 315 170 8 525 827 556 824 1.53e-24 112
MsaG001790 AT3G12810.1 30.872 149 103 0 991 1139 1088 1236 1.79e-20 99.0
MsaG001790 AT3G57300.1 27.660 329 163 13 526 827 607 887 4.97e-23 107
MsaG001790 AT3G57300.1 34.375 160 104 1 973 1132 1202 1360 1.47e-21 102
MsaG001790 AT3G57300.4 27.660 329 163 13 526 827 607 887 4.97e-23 107
MsaG001790 AT3G57300.4 34.375 160 104 1 973 1132 1202 1360 1.47e-21 102
MsaG001790 AT3G57300.3 27.660 329 163 13 526 827 607 887 6.24e-23 106
MsaG001790 AT2G02090.1 37.179 156 96 2 976 1131 587 740 4.79e-22 103
MsaG001790 AT2G02090.1 27.193 342 191 13 525 847 234 536 7.34e-17 86.7
MsaG001790 AT5G63950.1 35.811 148 94 1 998 1144 752 899 1.12e-21 102
MsaG001790 AT5G63950.2 35.811 148 94 1 998 1144 735 882 1.14e-21 102
MsaG001790 AT3G57300.2 34.375 160 104 1 973 1132 1235 1393 1.25e-21 102
MsaG001790 AT3G57300.2 25.138 362 163 13 526 827 607 920 2.44e-19 95.1
MsaG001790 AT2G18760.3 36.364 154 97 1 991 1143 799 952 2.33e-21 101
MsaG001790 AT2G18760.4 36.364 154 97 1 991 1143 740 893 3.26e-21 101
MsaG001790 AT2G18760.1 36.364 154 97 1 991 1143 740 893 3.26e-21 101
MsaG001790 AT2G18760.2 36.364 154 97 1 991 1143 740 893 3.26e-21 101
MsaG001790 AT2G18760.7 36.364 154 97 1 991 1143 740 893 3.26e-21 101
MsaG001790 AT2G18760.5 36.364 154 97 1 991 1143 740 893 3.26e-21 101
MsaG001790 AT2G18760.6 36.364 154 97 1 991 1143 740 893 3.26e-21 101
MsaG001790 AT1G03750.1 40.157 127 76 0 995 1121 545 671 3.66e-21 100
MsaG001790 AT1G03750.1 27.622 286 160 10 525 794 159 413 5.10e-20 97.1
MsaG001790 AT2G13370.1 24.843 318 179 8 527 831 647 917 6.57e-21 100
MsaG001790 AT2G13370.1 28.358 201 117 4 923 1122 908 1082 5.52e-18 90.9
MsaG001790 AT2G13370.2 24.843 318 179 8 527 831 647 917 6.57e-21 100
MsaG001790 AT2G13370.2 28.358 201 117 4 923 1122 908 1082 5.52e-18 90.9
MsaG001790 AT2G13370.3 24.843 318 179 8 527 831 647 917 6.57e-21 100
MsaG001790 AT2G13370.3 28.358 201 117 4 923 1122 908 1082 5.52e-18 90.9
MsaG001790 AT2G28290.2 35.135 148 95 1 981 1127 1076 1223 8.73e-21 100
MsaG001790 AT2G28290.2 28.354 328 155 15 526 827 775 1048 2.02e-20 99.0
MsaG001790 AT2G28290.6 35.135 148 95 1 981 1127 1077 1224 9.43e-21 100
MsaG001790 AT2G28290.6 28.354 328 155 15 526 827 776 1049 2.02e-20 99.0
MsaG001790 AT2G28290.3 35.135 148 95 1 981 1127 1076 1223 9.59e-21 100
MsaG001790 AT2G28290.3 28.354 328 155 15 526 827 775 1048 2.12e-20 99.0
MsaG001790 AT2G28290.4 35.135 148 95 1 981 1127 1076 1223 9.59e-21 100
MsaG001790 AT2G28290.4 28.354 328 155 15 526 827 775 1048 2.12e-20 99.0
MsaG001790 AT2G28290.1 35.135 148 95 1 981 1127 1076 1223 9.60e-21 100
MsaG001790 AT2G28290.1 28.354 328 155 15 526 827 775 1048 2.20e-20 99.0
MsaG001790 AT2G28290.5 35.135 148 95 1 981 1127 1077 1224 9.60e-21 100
MsaG001790 AT2G28290.5 28.354 328 155 15 526 827 776 1049 2.20e-20 99.0
MsaG001790 AT3G54280.1 35.433 127 79 1 995 1118 1831 1957 1.46e-20 99.4
MsaG001790 AT3G54280.1 24.462 372 218 9 495 838 1441 1777 1.32e-17 89.7
MsaG001790 AT3G54280.2 35.433 127 79 1 995 1118 1862 1988 1.57e-20 99.4
MsaG001790 AT3G54280.2 24.462 372 218 9 495 838 1472 1808 1.18e-17 89.7
MsaG001790 AT1G08600.1 34.973 183 103 4 976 1143 1093 1274 1.89e-20 99.0
MsaG001790 AT1G08600.4 34.973 183 103 4 976 1143 1114 1295 2.12e-20 98.6
MsaG001790 AT1G08600.3 34.973 183 103 4 976 1143 1114 1295 2.12e-20 98.6
MsaG001790 AT1G08600.2 34.973 183 103 4 976 1143 1114 1295 2.12e-20 98.6
MsaG001790 AT2G25170.3 30.994 171 114 2 973 1139 616 786 2.29e-20 98.6
MsaG001790 AT2G25170.3 23.100 329 176 9 527 828 321 599 7.34e-19 93.6
MsaG001790 AT2G25170.1 30.994 171 114 2 973 1139 590 760 2.53e-20 98.2
MsaG001790 AT2G25170.1 23.100 329 176 9 527 828 295 573 5.79e-19 94.0
MsaG001790 AT2G25170.4 30.994 171 114 2 973 1139 590 760 2.53e-20 98.2
MsaG001790 AT2G25170.4 23.100 329 176 9 527 828 295 573 5.79e-19 94.0
MsaG001790 AT2G25170.2 30.994 171 114 2 973 1139 607 777 2.65e-20 98.2
MsaG001790 AT2G25170.2 23.100 329 176 9 527 828 312 590 6.23e-19 94.0
MsaG001790 AT1G05490.1 36.649 191 97 5 974 1141 1196 1385 4.25e-20 97.8
MsaG001790 AT5G66750.1 27.139 339 173 12 521 833 218 508 6.67e-20 96.3
MsaG001790 AT5G66750.1 35.385 130 83 1 993 1121 539 668 2.75e-19 94.4
MsaG001790 AT4G31900.3 33.775 151 97 2 973 1122 519 667 9.99e-20 96.3
MsaG001790 AT4G31900.3 25.472 318 159 11 527 828 247 502 1.37e-19 95.9
MsaG001790 AT4G31900.2 33.775 151 97 2 973 1122 478 626 1.00e-19 96.3
MsaG001790 AT4G31900.2 25.472 318 159 11 527 828 206 461 2.01e-19 95.1
MsaG001790 AT4G31900.1 33.775 151 97 2 973 1122 519 667 1.10e-19 96.3
MsaG001790 AT4G31900.1 25.472 318 159 11 527 828 247 502 1.37e-19 95.9
MsaG001790 AT5G44800.1 36.667 150 89 4 976 1122 1003 1149 1.33e-18 92.8
MsaG001790 AT5G44800.1 25.472 318 175 11 527 828 711 982 2.62e-17 88.6
MsaG001790 AT2G44980.1 29.480 173 121 1 958 1129 348 520 1.97e-16 85.1
MsaG001790 AT2G44980.1 22.756 312 187 9 530 827 77 348 2.75e-13 75.1
MsaG001790 AT3G24340.1 33.516 182 114 3 946 1121 896 1076 5.14e-16 84.3
MsaG001790 AT2G44980.3 28.415 183 120 1 958 1129 356 538 5.65e-16 84.0
MsaG001790 AT2G44980.3 21.807 321 194 7 527 827 73 356 1.31e-13 76.3
MsaG001790 AT2G44980.2 28.415 183 120 1 958 1129 357 539 6.00e-16 83.6
MsaG001790 AT2G44980.2 21.698 318 192 7 530 827 77 357 1.04e-12 73.2
MsaG001790 AT3G54460.2 30.667 150 100 2 989 1135 891 1039 7.31e-16 83.6
MsaG001790 AT3G54460.2 33.121 157 97 4 579 728 455 610 4.31e-13 74.7
MsaG001790 AT3G54460.1 30.667 150 100 2 989 1135 1188 1336 9.09e-16 83.6
MsaG001790 AT3G54460.1 33.121 157 97 4 579 728 752 907 4.56e-13 74.7
MsaG001790 AT1G48310.3 31.847 157 99 3 969 1118 453 608 4.62e-15 80.5
MsaG001790 AT1G48310.2 32.432 148 92 3 969 1109 458 604 4.90e-15 80.5
MsaG001790 AT1G48310.1 32.432 148 92 3 969 1109 453 599 5.34e-15 80.5
MsaG001790 AT2G46020.2 38.060 134 78 3 998 1130 1328 1457 1.20e-14 80.1
MsaG001790 AT2G46020.2 29.697 330 163 14 526 827 1002 1290 2.13e-14 79.3
MsaG001790 AT2G46020.3 38.060 134 78 3 998 1130 1328 1457 1.20e-14 80.1
MsaG001790 AT2G46020.3 29.697 330 163 14 526 827 1002 1290 2.13e-14 79.3
MsaG001790 AT2G46020.4 38.060 134 78 3 998 1130 1328 1457 1.20e-14 80.1
MsaG001790 AT2G46020.4 29.697 330 163 14 526 827 1002 1290 2.13e-14 79.3
MsaG001790 AT2G46020.5 38.060 134 78 3 998 1130 1327 1456 1.24e-14 80.1
MsaG001790 AT2G46020.5 29.787 329 163 14 526 827 1002 1289 4.08e-14 78.2
MsaG001790 AT2G46020.1 38.060 134 78 3 998 1130 1327 1456 1.24e-14 80.1
MsaG001790 AT2G46020.1 29.787 329 163 14 526 827 1002 1289 4.08e-14 78.2
MsaG001790 AT2G46020.6 38.060 134 78 3 998 1130 1327 1456 1.24e-14 80.1
MsaG001790 AT2G46020.6 29.787 329 163 14 526 827 1002 1289 4.08e-14 78.2
MsaG001790 AT3G42670.2 40.566 106 61 2 1006 1109 1088 1193 2.95e-13 75.1
MsaG001790 AT3G42670.3 40.566 106 61 2 1006 1109 1088 1193 2.95e-13 75.1
MsaG001790 AT3G42670.1 40.566 106 61 2 1006 1109 1088 1193 2.95e-13 75.1
MsaG001790 AT3G42670.4 40.566 106 61 2 1006 1109 1090 1195 3.00e-13 75.1
MsaG001790 AT5G07810.1 32.824 131 88 0 993 1123 553 683 5.25e-13 74.3
MsaG001790 AT5G20420.1 40.566 106 61 2 1006 1109 1094 1199 2.42e-12 72.4
MsaG001790 AT2G21450.3 32.090 134 86 1 993 1121 544 677 3.69e-12 71.2
MsaG001790 AT2G21450.2 32.090 134 86 1 993 1121 642 775 3.89e-12 71.2
MsaG001790 AT2G21450.1 32.090 134 86 1 993 1121 635 768 3.90e-12 71.2

Find 252 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATTCCCTTGACCAATTTC+AGG 0.167428 1:-26658567 None:intergenic
TGGATACATCGATGAGGTTT+TGG 0.202894 1:+26659441 MsaT001790.1:CDS
AGATATCATCTTCTGTTTCT+TGG 0.213521 1:-26660793 None:intergenic
GGCTACACATCAGTGTCTTT+GGG 0.220757 1:-26656988 None:intergenic
TTCTTTATCCTTTGTTTCCT+TGG 0.222309 1:-26658614 None:intergenic
AGGCTACACATCAGTGTCTT+TGG 0.233821 1:-26656989 None:intergenic
ATATCCATATTTGTTCATTA+TGG 0.248590 1:+26657735 MsaT001790.1:CDS
CGCCGACACCGGTGTTGGTT+CGG 0.259876 1:-26654886 None:intergenic
TGCATCATTTCAAGCTTATA+CGG 0.290345 1:-26655960 None:intergenic
CACTGCCGCTGGTGTCTAAC+TGG 0.304962 1:+26658049 MsaT001790.1:CDS
GCATCAGACTCGTCGGAGTT+AGG 0.316471 1:-26654941 None:intergenic
CCCACCATAATGAACAAATA+TGG 0.317995 1:-26657739 None:intergenic
TGAGCCTGGGTGGTCATTAT+TGG 0.320846 1:+26655537 MsaT001790.1:CDS
ATGATGAAGTTCGGACTTCC+AGG 0.322572 1:+26660829 MsaT001790.1:CDS
GGTGAGTTTCCTGTTGAGCC+TGG 0.323707 1:+26655523 MsaT001790.1:CDS
GTGCAACATACTGCTCAAAT+TGG 0.336046 1:-26659069 None:intergenic
TTCTCAATATCAACCTTGAA+TGG 0.340545 1:-26659661 None:intergenic
TTATACGATGTATGCGGATT+CGG 0.347936 1:-26655640 None:intergenic
AAGCTGTGAGTGATGAAGTT+AGG 0.351208 1:+26655434 MsaT001790.1:CDS
ATAGGATTCTTAAGATTTGA+TGG 0.357413 1:+26659826 MsaT001790.1:CDS
TCCTCAGTTGTTGCTGGAAG+TGG 0.360185 1:-26656801 None:intergenic
TAACAGCAAATCAGGATTAC+TGG 0.364949 1:-26657769 None:intergenic
AACCCATCGTCTAATTTAGA+AGG 0.369065 1:+26657526 MsaT001790.1:CDS
TGTTCATCCTCAGTTGTTGC+TGG 0.371403 1:-26656807 None:intergenic
GCCGACACCGGTGTTGGTTC+GGG 0.371451 1:-26654885 None:intergenic
GTGATTCCTCTTGTGCAATC+TGG 0.373109 1:+26655903 MsaT001790.1:CDS
GGATCAAAGAGCCCTGAAAT+TGG 0.375209 1:+26658555 MsaT001790.1:CDS
TTGGCAGATGCAATGGGACT+TGG 0.378144 1:+26657388 MsaT001790.1:CDS
GGTTAAGGTTGAACCGGTTA+AGG 0.378958 1:+26655306 MsaT001790.1:CDS
GAGCCTGGGTGGTCATTATT+GGG 0.379945 1:+26655538 MsaT001790.1:CDS
AGATTCATTACCTTCCTATA+TGG 0.380304 1:-26656426 None:intergenic
CAAACGGGTTCAACCTTAAC+CGG 0.381013 1:-26655349 None:intergenic
TAACCCATTGCATATATTGT+AGG 0.382758 1:-26657110 None:intergenic
CGTGTCTCGACCAAACGTTC+TGG 0.385149 1:+26655679 MsaT001790.1:CDS
CACTTTAATTGTTTGTCCTA+TGG 0.391139 1:+26657552 MsaT001790.1:CDS
GGTTAAGGCTGAACCGGTTA+AGG 0.392088 1:+26655336 MsaT001790.1:CDS
AAGAAATAATGTTGTTAGTA+AGG 0.393172 1:+26655982 MsaT001790.1:CDS
AGAGGCTGAGCGACGAGAAC+GGG 0.394665 1:-26654848 None:intergenic
TAATGAGGATTCATCGTATT+GGG 0.397048 1:+26660204 MsaT001790.1:CDS
AGCTGTGAGTGATGAAGTTA+GGG 0.397540 1:+26655435 MsaT001790.1:CDS
GGTTAAGGTTGAACCGGTTA+AGG 0.399768 1:+26655321 MsaT001790.1:CDS
AGAATGCCTATTCAATTGTT+GGG 0.399973 1:+26659558 MsaT001790.1:CDS
TCTAACTGGAACACCACTTC+AGG 0.402583 1:+26658063 MsaT001790.1:CDS
GATGTTGTCTTGACAACTTA+TGG 0.404787 1:+26657798 MsaT001790.1:CDS
AATGACCACCCAGGCTCAAC+AGG 0.405219 1:-26655532 None:intergenic
TGATACACAGGAATCGGTTA+AGG 0.409942 1:+26655291 MsaT001790.1:CDS
AAGAAACAGAAGATGATATC+TGG 0.411298 1:+26660795 MsaT001790.1:CDS
ATATACGTCAACATATTTAC+TGG 0.411869 1:+26657226 MsaT001790.1:CDS
CTTTCTTGCGTGTGCAACCT+TGG 0.413656 1:+26658367 MsaT001790.1:CDS
TGTTTGTCCTATGGCGTTGT+TGG 0.416565 1:+26657561 MsaT001790.1:CDS
CAATTGTTGGGGTACCTCAA+TGG 0.418156 1:+26659570 MsaT001790.1:CDS
TGTGCAATCTGGAAATGTTA+AGG 0.418183 1:+26655914 MsaT001790.1:CDS
TCTGCTCAAGTCTGCATACT+TGG 0.418328 1:-26659275 None:intergenic
TGAGTATTTGACGGCAGATT+GGG 0.418796 1:-26659603 None:intergenic
TCATACTCTAACAGCAAATC+AGG 0.419834 1:-26657777 None:intergenic
GAGAATGCCTATTCAATTGT+TGG 0.424697 1:+26659557 MsaT001790.1:CDS
CATCAGACTCGTCGGAGTTA+GGG 0.434254 1:-26654940 None:intergenic
TCCATCAGAAAGCCCATTCA+AGG 0.436190 1:+26659648 MsaT001790.1:CDS
AATTGTTGGGGTACCTCAAT+GGG 0.437831 1:+26659571 MsaT001790.1:CDS
AGGTACCCCAACAATTGAAT+AGG 0.439398 1:-26659564 None:intergenic
CATCGATGTATCCACGAGAT+TGG 0.440850 1:-26659432 None:intergenic
TCTTCTGACTTCAACCTGCC+TGG 0.441017 1:-26657448 None:intergenic
CGGGCACGGACGACGGTTAG+AGG 0.442496 1:-26654866 None:intergenic
ACCAGAGTCAAGCTCTGTAT+TGG 0.444501 1:+26657020 MsaT001790.1:CDS
TCAGCTTTGAACAAACTTGT+TGG 0.445273 1:+26656843 MsaT001790.1:CDS
AGAGAAATCTACATCCTTGC+TGG 0.445334 1:+26657083 MsaT001790.1:CDS
AATTCCCTTGACCAATTTCA+GGG 0.447512 1:-26658566 None:intergenic
TTAACCGGTTCAACCTTAAC+CGG 0.448681 1:-26655319 None:intergenic
TGAGGATGAACAAGCACTTT+CGG 0.449645 1:+26656818 MsaT001790.1:CDS
TCCATATTTGTTCATTATGG+TGG 0.450185 1:+26657738 MsaT001790.1:CDS
TCTGTATAGGTGGACTAAGT+TGG 0.452785 1:+26658510 MsaT001790.1:intron
TTAACGAAACAAAAGAGAAA+AGG 0.453574 1:+26659890 MsaT001790.1:CDS
TTGAGTATTTGACGGCAGAT+TGG 0.453634 1:-26659604 None:intergenic
CTTGCCATCTGTGTTGCTTG+TGG 0.453973 1:-26657268 None:intergenic
TGGGAGGCTGCCAATGGAAT+GGG 0.459219 1:+26655872 MsaT001790.1:CDS
AACTCACCATCCTCAAGATT+CGG 0.461007 1:-26655508 None:intergenic
CCATATTTGTTCATTATGGT+GGG 0.461498 1:+26657739 MsaT001790.1:CDS
ACCTTGAATGGGCTTTCTGA+TGG 0.461531 1:-26659649 None:intergenic
CTCTGTCGTCACACTGCCGC+TGG 0.466043 1:+26658038 MsaT001790.1:CDS
TTAACCGGTTCAGCCTTAAC+CGG 0.471528 1:-26655334 None:intergenic
TCAACCTCCGGCGGCGGAGA+CGG 0.473174 1:+26655042 MsaT001790.1:CDS
TCTCAATATCAACCTTGAAT+GGG 0.473363 1:-26659660 None:intergenic
CCTGTCAATAAGCGAAGAAA+AGG 0.473656 1:+26656768 MsaT001790.1:CDS
ACAGCACATATCAGATGATT+CGG 0.473769 1:-26659326 None:intergenic
GCTTCATCTTCAAATTCTTG+TGG 0.474467 1:-26654998 None:intergenic
GTTTGTCCTATGGCGTTGTT+GGG 0.476566 1:+26657562 MsaT001790.1:CDS
GTGTGCAACCTTGGTGCAGC+TGG 0.480527 1:+26658376 MsaT001790.1:CDS
CACTCACTGATGATGAAGTT+CGG 0.480785 1:+26660820 MsaT001790.1:CDS
CCTATCCCTCTCCTCCTCAA+TGG 0.480799 1:-26659808 None:intergenic
AACCTTGGTGCAGCTGGCAG+TGG 0.481522 1:+26658382 MsaT001790.1:CDS
ATTGCTTGCTCCTCAACTGC+AGG 0.481909 1:-26660182 None:intergenic
TGCTAGAGATTGAGCCATAT+AGG 0.482526 1:+26656412 MsaT001790.1:CDS
TAGTACCACTCCAGAACGTT+TGG 0.482761 1:-26655689 None:intergenic
GTGAGTTTCCTGTTGAGCCT+GGG 0.483079 1:+26655524 MsaT001790.1:CDS
CTTTCTATTCCAGAATAGCT+TGG 0.483883 1:+26658323 MsaT001790.1:intron
TCACTAAAAGCTGGTGGTGT+TGG 0.484085 1:+26660020 MsaT001790.1:CDS
TGAACCGGTTAAGGCTGAAC+CGG 0.484926 1:+26655330 MsaT001790.1:CDS
TTGGGAGGCTGCCAATGGAA+TGG 0.486979 1:+26655871 MsaT001790.1:CDS
TGAACCGGTTAAGGTTGAAC+CGG 0.489926 1:+26655315 MsaT001790.1:CDS
TGAATCAACGATTCAAATGA+AGG 0.490031 1:+26655183 MsaT001790.1:CDS
CCGAGTCTGTTGATACCACT+TGG 0.490574 1:+26656328 MsaT001790.1:CDS
GCACTGATTCTTAGTAATCC+AGG 0.491332 1:+26657430 MsaT001790.1:CDS
TAACGAAACAAAAGAGAAAA+GGG 0.491918 1:+26659891 MsaT001790.1:CDS
ATAATGAGGATTCATCGTAT+TGG 0.493417 1:+26660203 MsaT001790.1:CDS
CCATTGAGGAGGAGAGGGAT+AGG 0.495492 1:+26659808 MsaT001790.1:CDS
ACATTTCCAGATTGCACAAG+AGG 0.497026 1:-26655909 None:intergenic
GGTTTGTGATACACAGGAAT+CGG 0.501830 1:+26655285 MsaT001790.1:CDS
GGTTCAAAAGCCCTATGAGC+AGG 0.501967 1:+26658531 MsaT001790.1:CDS
ATTGCTACTTCTACTGCTAA+AGG 0.502889 1:+26655574 MsaT001790.1:CDS
TACCATTAGGAAAACATTTG+AGG 0.504959 1:-26660060 None:intergenic
CAATAGCAGCCTCAGCAACC+TGG 0.505107 1:-26658015 None:intergenic
CTCCACCTCATCATCGCAAA+CGG 0.505221 1:-26655386 None:intergenic
GGAATCGGTTAAGGTTGAAC+CGG 0.506348 1:+26655300 MsaT001790.1:CDS
CATATTTGTTCATTATGGTG+GGG 0.508018 1:+26657740 MsaT001790.1:CDS
TTCACCACCGTCTCCGCCGC+CGG 0.512195 1:-26655049 None:intergenic
CAGCCTACAATATATGCAAT+GGG 0.512274 1:+26657107 MsaT001790.1:CDS
ATTGAATATCAGTTGGTGGC+AGG 0.512813 1:-26658821 None:intergenic
ATCGTATTGGGCAAAAGCGA+AGG 0.513110 1:+26660216 MsaT001790.1:CDS
CAATTTGACGGAGTCTTCAA+AGG 0.513432 1:+26659684 MsaT001790.1:CDS
GAGAATCCATTGAGGAGGAG+AGG 0.516866 1:+26659802 MsaT001790.1:CDS
GCCCGAACCAACACCGGTGT+CGG 0.517808 1:+26654884 MsaT001790.1:CDS
ATCAATTGAATATCAGTTGG+TGG 0.519017 1:-26658825 None:intergenic
CTAGCACCACTCTGTACCAT+TGG 0.520086 1:-26657961 None:intergenic
CACCGGTGTTGGTTCGGGCA+CGG 0.521625 1:-26654880 None:intergenic
TGAGCAGTCAGAATCTGAAC+GGG 0.521921 1:+26658854 MsaT001790.1:CDS
ATTTCACCCTGAGGAAATGA+AGG 0.524690 1:+26656527 MsaT001790.1:intron
AGAGGAATCTTACCTTCCAC+TGG 0.525557 1:-26657585 None:intergenic
GAGAGAATAGCATCTACCAC+AGG 0.525859 1:+26657936 MsaT001790.1:CDS
TACAGAGCTTGACTCTGGTA+AGG 0.528541 1:-26657016 None:intergenic
TATAAAATCCCATAAAAGCC+AGG 0.528721 1:+26657997 MsaT001790.1:CDS
GCTACACATCAGTGTCTTTG+GGG 0.529216 1:-26656987 None:intergenic
TCTGGAAATGTTAAGGTTCG+AGG 0.529804 1:+26655921 MsaT001790.1:CDS
ATACATCGTATAAGTTTCAA+TGG 0.530401 1:+26655650 MsaT001790.1:CDS
AAGGAAACAAAGGATAAAGA+AGG 0.531212 1:+26658616 MsaT001790.1:CDS
AAACAAAGGATAAAGAAGGA+AGG 0.532039 1:+26658620 MsaT001790.1:CDS
GACAACTTACTTTAGCTCTC+AGG 0.533333 1:-26658896 None:intergenic
GTTGGTGGCAGGACAAGTAT+AGG 0.534691 1:-26658810 None:intergenic
TTTGAAGGCGGTGAAGAAGG+AGG 0.534810 1:+26655459 MsaT001790.1:CDS
ACCTCCGGCGGCGGAGACGG+TGG 0.535447 1:+26655045 MsaT001790.1:CDS
CACCTTCTAAATTAGACGAT+GGG 0.536082 1:-26657528 None:intergenic
GAGGTGTTGAAAGTGGTGAA+GGG 0.537493 1:+26655406 MsaT001790.1:CDS
TGATATTGAGAACAATTTGA+CGG 0.537534 1:+26659672 MsaT001790.1:CDS
AACAGGGAACAGTGGAAGAT+CGG 0.539243 1:+26660754 MsaT001790.1:intron
GGCGTTGTTGGGCCAGTGGA+AGG 0.540622 1:+26657573 MsaT001790.1:CDS
AGCTGCAGAAGTCTTTGACC+TGG 0.540849 1:+26656866 MsaT001790.1:CDS
TCAATCAATTGAATATCAGT+TGG 0.541901 1:-26658828 None:intergenic
GTTGGTTCGGGCACGGACGA+CGG 0.545004 1:-26654873 None:intergenic
TGCTAAAGGAGTGAGAAGAT+TGG 0.545817 1:+26655588 MsaT001790.1:CDS
TGGCAGATGCAATGGGACTT+GGG 0.546445 1:+26657389 MsaT001790.1:CDS
ATATTTGTTCATTATGGTGG+GGG 0.549272 1:+26657741 MsaT001790.1:CDS
GCAGTATGTTGCACAAGGAA+AGG 0.550817 1:+26659078 MsaT001790.1:CDS
TCCAATACAGAGCTTGACTC+TGG 0.552781 1:-26657021 None:intergenic
GGAGGTGTTGAAAGTGGTGA+AGG 0.554092 1:+26655405 MsaT001790.1:CDS
AGTCAAGGATATTTGCATAG+TGG 0.556170 1:-26659108 None:intergenic
TTGTTGATGTCACTAAAAGC+TGG 0.557014 1:+26660011 MsaT001790.1:CDS
ATGATTCGGTATGAGACTCT+AGG 0.557763 1:-26659312 None:intergenic
ACAGATTTAGCCCATTCCAT+TGG 0.557887 1:-26655882 None:intergenic
TCAGCCTACAATATATGCAA+TGG 0.557968 1:+26657106 MsaT001790.1:CDS
GTCCGTGCCCGAACCAACAC+CGG 0.561375 1:+26654878 MsaT001790.1:CDS
AGGAAATGAAGGCTCAAAGC+GGG 0.562153 1:+26656538 MsaT001790.1:intron
TCCTGATAATTAACCTGAAG+TGG 0.565478 1:-26658076 None:intergenic
TGTAAGAAGATTCATTGTGA+AGG 0.568078 1:+26660244 MsaT001790.1:CDS
TGGGCACTTACCACCCATTG+AGG 0.570505 1:-26659584 None:intergenic
AAAGGTTGGGAGGCTGCCAA+TGG 0.570834 1:+26655866 MsaT001790.1:intron
TGAATCGTTGAAATCAATGA+AGG 0.572213 1:+26655159 MsaT001790.1:CDS
TTCAAAAGCCCTATGAGCAG+GGG 0.573467 1:+26658533 MsaT001790.1:CDS
CAGATTCCGAATCTTGAGGA+TGG 0.573996 1:+26655502 MsaT001790.1:CDS
GATTCAGATTCCGAATCTTG+AGG 0.577226 1:+26655498 MsaT001790.1:CDS
CTGCAAAACTGATGTGCACA+TGG 0.577259 1:-26659535 None:intergenic
AAGAGCCCTGAAATTGGTCA+AGG 0.581201 1:+26658561 MsaT001790.1:CDS
AACCGTTTGCGATGATGAGG+TGG 0.583375 1:+26655384 MsaT001790.1:CDS
AGCTTCGATCATCAAAGTCA+AGG 0.586086 1:+26654970 MsaT001790.1:CDS
ATCTGTTGGAGAATCCATTG+AGG 0.586420 1:+26659794 MsaT001790.1:CDS
ACAAATATGGATATGCTGCC+TGG 0.586898 1:-26657726 None:intergenic
CTTGAAACGCATTCAAAACC+AGG 0.587458 1:+26657708 MsaT001790.1:CDS
CGCCGGAGGTTGAAAAGCGA+CGG 0.587591 1:-26655032 None:intergenic
CCAAGTGGTATCAACAGACT+CGG 0.588986 1:-26656328 None:intergenic
CCATAAAAGCCAGGTTGCTG+AGG 0.589354 1:+26658006 MsaT001790.1:CDS
GTTCAAAAGCCCTATGAGCA+GGG 0.590959 1:+26658532 MsaT001790.1:CDS
TAGAGGCTGAGCGACGAGAA+CGG 0.592641 1:-26654849 None:intergenic
GCAAGAATCGGTGAAATCAA+AGG 0.594279 1:+26655240 MsaT001790.1:CDS
TCGTATTGGGCAAAAGCGAA+GGG 0.594361 1:+26660217 MsaT001790.1:CDS
TGAGGTGGAGGTGTTGAAAG+TGG 0.594444 1:+26655399 MsaT001790.1:CDS
TAATGAAAATGTAGGATCCA+TGG 0.594818 1:+26660153 MsaT001790.1:intron
CTGGGTGGTCATTATTGGGA+AGG 0.595959 1:+26655542 MsaT001790.1:CDS
TTGAAGTCAGAAGACAGTGA+TGG 0.595984 1:+26657457 MsaT001790.1:CDS
AGAATCCATTGAGGAGGAGA+GGG 0.596609 1:+26659803 MsaT001790.1:CDS
TGATTCTTAGTAATCCAGGC+AGG 0.598687 1:+26657434 MsaT001790.1:CDS
ACCACCGTCTCCGCCGCCGG+AGG 0.599049 1:-26655046 None:intergenic
GAATGCCTATTCAATTGTTG+GGG 0.601301 1:+26659559 MsaT001790.1:CDS
GCGAACGCCGACACCGGTGT+TGG 0.601442 1:-26654891 None:intergenic
TTGAGGAGCAAGCAATAATG+AGG 0.603347 1:+26660189 MsaT001790.1:CDS
GAAAACCGTTTGCGATGATG+AGG 0.603670 1:+26655381 MsaT001790.1:CDS
CTATGGCGTTGTTGGGCCAG+TGG 0.605396 1:+26657569 MsaT001790.1:CDS
CACTGGCCCAACAACGCCAT+AGG 0.606616 1:-26657568 None:intergenic
AGGTGTTGAAAGTGGTGAAG+GGG 0.607119 1:+26655407 MsaT001790.1:CDS
TGTAGAATGTGCTATATGCA+TGG 0.608661 1:+26659486 MsaT001790.1:CDS
GGTGTGTTGTAAAGGTTGGG+AGG 0.608735 1:+26655856 MsaT001790.1:intron
CCACCTTCTAAATTAGACGA+TGG 0.610308 1:-26657529 None:intergenic
CAGTGTAAGCAGTGGATATG+CGG 0.610377 1:-26656382 None:intergenic
GTGAGCAGTCAGAATCTGAA+CGG 0.611649 1:+26658853 MsaT001790.1:CDS
GCATCTACCACAGGGTCCAA+TGG 0.612645 1:+26657945 MsaT001790.1:CDS
TAAAGGAGTGAGAAGATTGG+TGG 0.612751 1:+26655591 MsaT001790.1:CDS
AGAAAGTTCTGATGTTGATG+TGG 0.614262 1:+26655207 MsaT001790.1:CDS
CGTCAACATATTTACTGGAG+AGG 0.615150 1:+26657231 MsaT001790.1:CDS
TGCAGAAGTCTTTGACCTGG+AGG 0.615592 1:+26656869 MsaT001790.1:CDS
ATGGTGGAATCCTGCAGTTG+AGG 0.617051 1:+26660172 MsaT001790.1:CDS
AAGGAGAACCAAGGAAACAA+AGG 0.619004 1:+26658606 MsaT001790.1:CDS
ATTTCCACAAGCAACACAGA+TGG 0.621081 1:+26657264 MsaT001790.1:CDS
AGAGATTGAGCCATATAGGA+AGG 0.621596 1:+26656416 MsaT001790.1:CDS
TCAACTGCATTAGTAAGTCA+AGG 0.621907 1:-26659123 None:intergenic
TCAAACTCTATCCAATCTCG+TGG 0.622566 1:+26659421 MsaT001790.1:CDS
CTCTGTACCATTGGACCCTG+TGG 0.622668 1:-26657952 None:intergenic
CCATCGTCTAATTTAGAAGG+TGG 0.623287 1:+26657529 MsaT001790.1:CDS
ACTTACTAATGCAGTTGAGA+CGG 0.623430 1:+26659128 MsaT001790.1:CDS
AGTTTCCTGTTGAGCCTGGG+TGG 0.623936 1:+26655527 MsaT001790.1:CDS
TGATACCACTTGGAGACTAG+AGG 0.624921 1:+26656338 MsaT001790.1:CDS
TTTGCATGCATCAGACTCGT+CGG 0.627349 1:-26654948 None:intergenic
CAAGCAACACAGATGGCAAG+AGG 0.631120 1:+26657271 MsaT001790.1:CDS
AGAGCCCTGAAATTGGTCAA+GGG 0.632813 1:+26658562 MsaT001790.1:CDS
CGTTTGCGATGATGAGGTGG+AGG 0.632948 1:+26655387 MsaT001790.1:CDS
CTCGACCAAACGTTCTGGAG+TGG 0.641808 1:+26655684 MsaT001790.1:CDS
GAGAACGCGAACGCCGACAC+CGG 0.646491 1:-26654897 None:intergenic
TTTGAGCAGTATGTTGCACA+AGG 0.648339 1:+26659073 MsaT001790.1:CDS
GCAACACAGATGGCAAGAGG+AGG 0.648362 1:+26657274 MsaT001790.1:CDS
TATACGGCGTAGCAATGCAT+CGG 0.649387 1:-26655944 None:intergenic
TGTTGGAGAATCCATTGAGG+AGG 0.653975 1:+26659797 MsaT001790.1:CDS
GAACGTGGTTTGTGATACAC+AGG 0.657147 1:+26655279 MsaT001790.1:CDS
TCAAAAGCCCTATGAGCAGG+GGG 0.659831 1:+26658534 MsaT001790.1:CDS
TGAAACTTATACGATGTATG+CGG 0.662039 1:-26655646 None:intergenic
TCAACTGCAGGATTCCACCA+TGG 0.662992 1:-26660170 None:intergenic
GAGGCTGAGCGACGAGAACG+GGG 0.664885 1:-26654847 None:intergenic
GACGGTGGTGAAGTGTGAGA+CGG 0.665972 1:+26655060 MsaT001790.1:CDS
TGTTGGGGTACCTCAATGGG+TGG 0.666377 1:+26659574 MsaT001790.1:CDS
TCAAACGCAAGCATCGAACG+TGG 0.667645 1:-26655094 None:intergenic
TACGAACACGAAAGTTGCGT+CGG 0.671806 1:+26655132 MsaT001790.1:CDS
TGAAAATGTAGGATCCATGG+TGG 0.671865 1:+26660156 MsaT001790.1:intron
ACTTGGAGACTAGAGGCTTG+TGG 0.680060 1:+26656345 MsaT001790.1:CDS
GTGTTCCAGTTAGACACCAG+CGG 0.680938 1:-26658054 None:intergenic
CTTCCCAATAATGACCACCC+AGG 0.682740 1:-26655541 None:intergenic
ATATTTAACAGTGTAAGCAG+TGG 0.685796 1:-26656390 None:intergenic
ATTGATGTTAAGGAGAACCA+AGG 0.686095 1:+26658597 MsaT001790.1:CDS
ACAAGCCTCTAGTCTCCAAG+TGG 0.689651 1:-26656343 None:intergenic
TTGATGTCACTAAAAGCTGG+TGG 0.692474 1:+26660014 MsaT001790.1:CDS
TACCACTGCCAGCTGCACCA+AGG 0.695747 1:-26658384 None:intergenic
AGAGAATAGCATCTACCACA+GGG 0.698579 1:+26657937 MsaT001790.1:CDS
GCCACTTCCAGCAACAACTG+AGG 0.699488 1:+26656800 MsaT001790.1:CDS
AGAAGTTGCTAATCTGAACG+TGG 0.704739 1:+26655264 MsaT001790.1:CDS
ATATTGTAGGCTGACCAGCA+AGG 0.716176 1:-26657097 None:intergenic
GAGGAAATGAAGGCTCAAAG+CGG 0.734460 1:+26656537 MsaT001790.1:intron
ATCTCGTGGATACATCGATG+AGG 0.750732 1:+26659435 MsaT001790.1:CDS
CAGGGTCCAATGGTACAGAG+TGG 0.752658 1:+26657955 MsaT001790.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 26654812 26660881 26654812 ID=MsaG001790
Chr1 mRNA 26654812 26660881 26654812 ID=MsaT001790.1;Parent=MsaG001790
Chr1 exon 26654812 26655705 26654812 ID=MsaT001790.1.exon1;Parent=MsaT001790.1
Chr1 CDS 26654812 26655705 26654812 ID=cds.MsaT001790.1;Parent=MsaT001790.1
Chr1 exon 26655870 26656003 26655870 ID=MsaT001790.1.exon2;Parent=MsaT001790.1
Chr1 CDS 26655870 26656003 26655870 ID=cds.MsaT001790.1;Parent=MsaT001790.1
Chr1 exon 26656302 26656437 26656302 ID=MsaT001790.1.exon3;Parent=MsaT001790.1
Chr1 CDS 26656302 26656437 26656302 ID=cds.MsaT001790.1;Parent=MsaT001790.1
Chr1 exon 26656540 26656572 26656540 ID=MsaT001790.1.exon4;Parent=MsaT001790.1
Chr1 CDS 26656540 26656572 26656540 ID=cds.MsaT001790.1;Parent=MsaT001790.1
Chr1 exon 26656741 26656890 26656741 ID=MsaT001790.1.exon5;Parent=MsaT001790.1
Chr1 CDS 26656741 26656890 26656741 ID=cds.MsaT001790.1;Parent=MsaT001790.1
Chr1 exon 26656977 26657128 26656977 ID=MsaT001790.1.exon6;Parent=MsaT001790.1
Chr1 CDS 26656977 26657128 26656977 ID=cds.MsaT001790.1;Parent=MsaT001790.1
Chr1 exon 26657219 26657297 26657219 ID=MsaT001790.1.exon7;Parent=MsaT001790.1
Chr1 CDS 26657219 26657297 26657219 ID=cds.MsaT001790.1;Parent=MsaT001790.1
Chr1 exon 26657385 26657594 26657385 ID=MsaT001790.1.exon8;Parent=MsaT001790.1
Chr1 CDS 26657385 26657594 26657385 ID=cds.MsaT001790.1;Parent=MsaT001790.1
Chr1 exon 26657702 26657845 26657702 ID=MsaT001790.1.exon9;Parent=MsaT001790.1
Chr1 CDS 26657702 26657845 26657702 ID=cds.MsaT001790.1;Parent=MsaT001790.1
Chr1 exon 26657932 26658084 26657932 ID=MsaT001790.1.exon10;Parent=MsaT001790.1
Chr1 CDS 26657932 26658084 26657932 ID=cds.MsaT001790.1;Parent=MsaT001790.1
Chr1 exon 26658336 26658403 26658336 ID=MsaT001790.1.exon11;Parent=MsaT001790.1
Chr1 CDS 26658336 26658403 26658336 ID=cds.MsaT001790.1;Parent=MsaT001790.1
Chr1 exon 26658519 26658641 26658519 ID=MsaT001790.1.exon12;Parent=MsaT001790.1
Chr1 CDS 26658519 26658641 26658519 ID=cds.MsaT001790.1;Parent=MsaT001790.1
Chr1 exon 26658809 26658908 26658809 ID=MsaT001790.1.exon13;Parent=MsaT001790.1
Chr1 CDS 26658809 26658908 26658809 ID=cds.MsaT001790.1;Parent=MsaT001790.1
Chr1 exon 26659067 26659179 26659067 ID=MsaT001790.1.exon14;Parent=MsaT001790.1
Chr1 CDS 26659067 26659179 26659067 ID=cds.MsaT001790.1;Parent=MsaT001790.1
Chr1 exon 26659261 26659912 26659261 ID=MsaT001790.1.exon15;Parent=MsaT001790.1
Chr1 CDS 26659261 26659912 26659261 ID=cds.MsaT001790.1;Parent=MsaT001790.1
Chr1 exon 26660008 26660079 26660008 ID=MsaT001790.1.exon16;Parent=MsaT001790.1
Chr1 CDS 26660008 26660079 26660008 ID=cds.MsaT001790.1;Parent=MsaT001790.1
Chr1 exon 26660167 26660265 26660167 ID=MsaT001790.1.exon17;Parent=MsaT001790.1
Chr1 CDS 26660167 26660265 26660167 ID=cds.MsaT001790.1;Parent=MsaT001790.1
Chr1 exon 26660759 26660881 26660759 ID=MsaT001790.1.exon18;Parent=MsaT001790.1
Chr1 CDS 26660759 26660881 26660759 ID=cds.MsaT001790.1;Parent=MsaT001790.1
Gene Sequence

>MsaT001790.1

ATGGAAAACGACAATGTCGTTTTTAGAAACGGCAACCCCGTTCTCGTCGCTCAGCCTCTAACCGTCGTCCGTGCCCGAACCAACACCGGTGTCGGCGTTCGCGTTCTCGCAACGCCGCCGAATCAAAACCCTAACTCCGACGAGTCTGATGCATGCAAAGCTTCGATCATCAAAGTCAAGGATGAACCACAAGAATTTGAAGATGAAGCAAAATCTGTCACCGTCGCTTTTCAACCTCCGGCGGCGGAGACGGTGGTGAAGTGTGAGACGGTTTCTGATGAACCACGTTCGATGCTTGCGTTTGATGATTTTTTGAAAGCTACGAACACGAAAGTTGCGTCGGTTGATGAATCGTTGAAATCAATGAAGGTTGAATCAACGATTCAAATGAAGGTAGAAAGTTCTGATGTTGATGTGGTTTTCGAAACGCAAGAATCGGTGAAATCAAAGGAAGAAGTTGCTAATCTGAACGTGGTTTGTGATACACAGGAATCGGTTAAGGTTGAACCGGTTAAGGTTGAACCGGTTAAGGCTGAACCGGTTAAGGTTGAACCCGTTTGTGCAGAGAAGAAAACCGTTTGCGATGATGAGGTGGAGGTGTTGAAAGTGGTGAAGGGGAAAGAAGCTGTGAGTGATGAAGTTAGGGTTTTGAAGGCGGTGAAGAAGGAGGTAGTTGAAGAGAAGAAGATTCAGATTCCGAATCTTGAGGATGGTGAGTTTCCTGTTGAGCCTGGGTGGTCATTATTGGGAAGGAAGATTGAGATTGCTACTTCTACTGCTAAAGGAGTGAGAAGATTGGTGGATAATGAGATTATTCATTTTGATTTTCCGAATCCGCATACATCGTATAAGTTTCAATGGATCGTTCGTGTCTCGACCAAACGTTCTGGAGTGGTTGGGAGGCTGCCAATGGAATGGGCTAAATCTGTGATTCCTCTTGTGCAATCTGGAAATGTTAAGGTTCGAGGCCGATGCATTGCTACGCCGTATAAGCTTGAAATGATGCAAGAAATAATGTTGTTAGTAAGTTTTTATGTTCATCACTCTGTATTCTCCGAGTCTGTTGATACCACTTGGAGACTAGAGGCTTGTGGTAATGTTAACTCTGCCGCATATCCACTGCTTACACTGTTAAATATGCTAGAGATTGAGCCATATAGGAAGGAAATGAAGGCTCAAAGCGGGTGCTTAAAGTATCTTGACTCAGATGAAGTTTCAGTAATTCCTGTCAATAAGCGAAGAAAAGGTGTCAGTGAGCCACTTCCAGCAACAACTGAGGATGAACAAGCACTTTCGGAGTCAGCTTTGAACAAACTTGTTGGAGCTGCAGAAGTCTTTGACCTGGAGGAGAAGGAAGCCCCAAAGACACTGATGTGTAGCCTAAAACCTTACCAGAGTCAAGCTCTGTATTGGATGACAAAAATTGAGAAGGGAGGTGATGATGAAAATGCTGAGAGAAATCTACATCCTTGCTGGTCAGCCTACAATATATGCAATGGGAGGTCAATATACGTCAACATATTTACTGGAGAGGCAGCAAAGAAATTTCCACAAGCAACACAGATGGCAAGAGGAGGAATTTTGGCAGATGCAATGGGACTTGGGAAGACTGTTATGACAATTGCACTGATTCTTAGTAATCCAGGCAGGTTGAAGTCAGAAGACAGTGATGGAGAGAGCGTATATGACAATATTTTTTCAGCTAAGAGGAGGAATGTTAACCCATCGTCTAATTTAGAAGGTGGCACTTTAATTGTTTGTCCTATGGCGTTGTTGGGCCAGTGGAAGGATGAACTTGAAACGCATTCAAAACCAGGCAGCATATCCATATTTGTTCATTATGGTGGGGGAAGAACCAGTAATCCTGATTTGCTGTTAGAGTATGATGTTGTCTTGACAACTTATGGTGTCCTATCAGCTTCTTATAAAAGTGAAAGAGAGAATAGCATCTACCACAGGGTCCAATGGTACAGAGTGGTGCTAGACGAAGCTCATCATATAAAATCCCATAAAAGCCAGGTTGCTGAGGCTGCTATTGCTCTGTCGTCACACTGCCGCTGGTGTCTAACTGGAACACCACTTCAGAATAGCTTGGAAGATCTATTCAGTCTCTTGTCTTTCTTGCGTGTGCAACCTTGGTGCAGCTGGCAGTGGTGGACTAAGTTGGTTCAAAAGCCCTATGAGCAGGGGGATCAAAGAGCCCTGAAATTGGTCAAGGGAATTTTGAGGACATTGATGTTAAGGAGAACCAAGGAAACAAAGGATAAAGAAGGAAGGCCTATACTTGTCCTGCCACCAACTGATATTCAATTGATTGAATGTGAGCAGTCAGAATCTGAACGGGACTTCTATGATGCTCTCTTCCTGAGAGCTAAAGTCCAATTTGAGCAGTATGTTGCACAAGGAAAGGTTCTTAACCACTATGCAAATATCCTTGACTTACTAATGCAGTTGAGACGGTGCTGCAACCATCCGTTTTTGGTCATGAGTGGGAGTGATACTGCCAAGTATGCAGACTTGAGCAGACTTGCAAGAAAATTCCTAGAGTCTCATACCGAATCATCTGATATGTGCTGTGAAAGTGATGCACCACAAAATGCAGAACTGAATAAACTTGCTAGTAATTTCTTACAGAATTCTGCTTCTGCTTCAAACTCTATCCAATCTCGTGGATACATCGATGAGGTTTTGGGGCATATTCAAAAGGGTGAAACTGTAGAATGTGCTATATGCATGGAATCACCAGATGATCCTGTTTTTACACCATGTGCACATCAGTTTTGCAGAGAATGCCTATTCAATTGTTGGGGTACCTCAATGGGTGGTAAGTGCCCAATCTGCCGTCAAATACTCAAGAAAAACGATCTTATTGTACTTCCATCAGAAAGCCCATTCAAGGTTGATATTGAGAACAATTTGACGGAGTCTTCAAAGGTTTCTAAGCTCTTTGATTTCTTAGAACATAGTCAGAAATATTCTGATGAAAAAAGTATTGTTTTTAGTCAATGGACTTCATTTTTTGATCTGTTGGAGAATCCATTGAGGAGGAGAGGGATAGGATTCTTAAGATTTGATGGAAAGTTGACTCAGAAGCAGAGAGAAAAAGTTTTGAAAGAATTTAACGAAACAAAAGAGAAAAGGGTTTTGTTGATGTCACTAAAAGCTGGTGGTGTTGGCTTGAACTTGACAGCAGCCTCAAATGTTTTCCTAATGGATCCATGGTGGAATCCTGCAGTTGAGGAGCAAGCAATAATGAGGATTCATCGTATTGGGCAAAAGCGAAGGGTTACTGTAAGAAGATTCATTGTGAAGGGAACAGTGGAAGATCGGTTGCAACAAGTGCAAGCCAAGAAACAGAAGATGATATCTGGTGCACTCACTGATGATGAAGTTCGGACTTCCAGGATTCAAGACCTCAAAATGCTTTTCTCATAG
Protein sequence

>MsaT001790.1

MENDNVVFRNGNPVLVAQPLTVVRARTNTGVGVRVLATPPNQNPNSDESDACKASIIKVKDEPQEFEDEAKSVTVAFQPPAAETVVKCETVSDEPRSMLAFDDFLKATNTKVASVDESLKSMKVESTIQMKVESSDVDVVFETQESVKSKEEVANLNVVCDTQESVKVEPVKVEPVKAEPVKVEPVCAEKKTVCDDEVEVLKVVKGKEAVSDEVRVLKAVKKEVVEEKKIQIPNLEDGEFPVEPGWSLLGRKIEIATSTAKGVRRLVDNEIIHFDFPNPHTSYKFQWIVRVSTKRSGVVGRLPMEWAKSVIPLVQSGNVKVRGRCIATPYKLEMMQEIMLLVSFYVHHSVFSESVDTTWRLEACGNVNSAAYPLLTLLNMLEIEPYRKEMKAQSGCLKYLDSDEVSVIPVNKRRKGVSEPLPATTEDEQALSESALNKLVGAAEVFDLEEKEAPKTLMCSLKPYQSQALYWMTKIEKGGDDENAERNLHPCWSAYNICNGRSIYVNIFTGEAAKKFPQATQMARGGILADAMGLGKTVMTIALILSNPGRLKSEDSDGESVYDNIFSAKRRNVNPSSNLEGGTLIVCPMALLGQWKDELETHSKPGSISIFVHYGGGRTSNPDLLLEYDVVLTTYGVLSASYKSERENSIYHRVQWYRVVLDEAHHIKSHKSQVAEAAIALSSHCRWCLTGTPLQNSLEDLFSLLSFLRVQPWCSWQWWTKLVQKPYEQGDQRALKLVKGILRTLMLRRTKETKDKEGRPILVLPPTDIQLIECEQSESERDFYDALFLRAKVQFEQYVAQGKVLNHYANILDLLMQLRRCCNHPFLVMSGSDTAKYADLSRLARKFLESHTESSDMCCESDAPQNAELNKLASNFLQNSASASNSIQSRGYIDEVLGHIQKGETVECAICMESPDDPVFTPCAHQFCRECLFNCWGTSMGGKCPICRQILKKNDLIVLPSESPFKVDIENNLTESSKVSKLFDFLEHSQKYSDEKSIVFSQWTSFFDLLENPLRRRGIGFLRFDGKLTQKQREKVLKEFNETKEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRRVTVRRFIVKGTVEDRLQQVQAKKQKMISGALTDDEVRTSRIQDLKMLFS*