Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG001797 | XP_024631074.1 | 95.916 | 759 | 30 | 1 | 1 | 758 | 1 | 759 | 0.0 | 1441 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG001797 | sp|Q0WPQ2|ETR2_ARATH | 54.235 | 791 | 302 | 15 | 1 | 756 | 1 | 766 | 0.0 | 786 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG001797 | tr|A0A072VSP2|A0A072VSP2_MEDTR | 95.916 | 759 | 30 | 1 | 1 | 758 | 1 | 759 | 0.0 | 1441 |
Gene ID | Type | Classification |
---|---|---|
MsaG001797 | TR | Others |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG001797 | MtrunA17_Chr1g0168161 | 95.916 | 759 | 30 | 1 | 1 | 758 | 1 | 759 | 0.0 | 1441 |
MsaG001797 | MtrunA17_Chr1g0186431 | 71.429 | 763 | 209 | 7 | 1 | 759 | 1 | 758 | 0.0 | 1089 |
MsaG001797 | MtrunA17_Chr7g0274831 | 54.681 | 737 | 320 | 7 | 25 | 756 | 31 | 758 | 0.0 | 821 |
MsaG001797 | MtrunA17_Chr1g0190021 | 53.351 | 746 | 332 | 7 | 19 | 756 | 18 | 755 | 0.0 | 785 |
MsaG001797 | MtrunA17_Chr4g0013831 | 37.703 | 740 | 440 | 15 | 28 | 757 | 5 | 733 | 2.12e-155 | 469 |
MsaG001797 | MtrunA17_Chr7g0269631 | 39.304 | 575 | 323 | 11 | 28 | 588 | 5 | 567 | 5.80e-114 | 358 |
MsaG001797 | MtrunA17_Chr4g0077091 | 64.865 | 74 | 24 | 2 | 688 | 759 | 1 | 74 | 2.69e-23 | 94.0 |
MsaG001797 | MtrunA17_Chr8g0377481 | 31.579 | 133 | 81 | 3 | 632 | 756 | 837 | 967 | 1.29e-13 | 75.1 |
MsaG001797 | MtrunA17_Chr3g0122391 | 29.412 | 136 | 85 | 3 | 632 | 759 | 895 | 1027 | 2.54e-12 | 70.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG001797 | AT3G23150.1 | 54.235 | 791 | 302 | 15 | 1 | 756 | 1 | 766 | 0.0 | 786 |
MsaG001797 | AT3G04580.2 | 52.279 | 746 | 340 | 11 | 23 | 757 | 22 | 762 | 0.0 | 742 |
MsaG001797 | AT3G04580.1 | 52.279 | 746 | 340 | 11 | 23 | 757 | 22 | 762 | 0.0 | 742 |
MsaG001797 | AT3G23150.2 | 56.271 | 606 | 224 | 11 | 1 | 582 | 1 | 589 | 0.0 | 624 |
MsaG001797 | AT1G04310.1 | 48.320 | 625 | 287 | 9 | 10 | 612 | 12 | 622 | 0.0 | 536 |
MsaG001797 | AT1G04310.2 | 48.320 | 625 | 287 | 9 | 10 | 612 | 12 | 622 | 0.0 | 536 |
MsaG001797 | AT1G66340.1 | 37.834 | 748 | 426 | 17 | 28 | 757 | 4 | 730 | 6.83e-154 | 466 |
MsaG001797 | AT2G40940.1 | 41.202 | 466 | 268 | 5 | 42 | 503 | 17 | 480 | 2.60e-110 | 348 |
MsaG001797 | AT5G35750.1 | 33.835 | 133 | 64 | 3 | 632 | 743 | 1031 | 1160 | 2.44e-12 | 71.2 |
Find 183 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTATGCATATTGGGTTTAA+TGG | 0.188176 | 1:-26845646 | MsaT001797.1:CDS |
GTTAAACTGTCGGAAACTTT+AGG | 0.198346 | 1:-26847823 | MsaT001797.1:CDS |
CCCCTTTGAAGTTATTCTTT+TGG | 0.208877 | 1:-26845791 | MsaT001797.1:CDS |
ATGGCTTTATGCAAGGGTTT+TGG | 0.236524 | 1:-26847031 | MsaT001797.1:CDS |
TTGTTTAATAGCTGGACTTA+TGG | 0.240419 | 1:-26848117 | MsaT001797.1:CDS |
ATGAAATAAAGAAGCTCAAT+AGG | 0.260762 | 1:+26848216 | None:intergenic |
GCAACTTATGAGAGAGAAAT+TGG | 0.272205 | 1:-26847386 | MsaT001797.1:CDS |
TAACAATACATCCTAGTTTC+TGG | 0.278898 | 1:+26845869 | None:intergenic |
TTAAACTGTCGGAAACTTTA+GGG | 0.291922 | 1:-26847822 | MsaT001797.1:CDS |
ATTGCTTTCATTGTACTTTG+TGG | 0.294523 | 1:-26848150 | MsaT001797.1:CDS |
CTTAACTTGCCTGATTTAGA+TGG | 0.294640 | 1:-26845766 | MsaT001797.1:CDS |
AGACCTCTGAACAAGGAATT+TGG | 0.296650 | 1:+26845949 | None:intergenic |
GATTCTTGTGTTTCAAGTTT+TGG | 0.305051 | 1:-26846894 | MsaT001797.1:CDS |
GTTACTTCAGGGAGGCTTGC+AGG | 0.306598 | 1:-26846743 | MsaT001797.1:CDS |
GCCTATCGCTGTTGCTTTAA+CGG | 0.315525 | 1:-26845698 | MsaT001797.1:CDS |
CCTTTGGAGATGAAATGTTT+TGG | 0.321337 | 1:-26847097 | MsaT001797.1:CDS |
GGAACTTGATAGATGGTAAT+GGG | 0.332716 | 1:-26846922 | MsaT001797.1:CDS |
CTGTTACGCGATACTTGTTT+TGG | 0.339387 | 1:-26847521 | MsaT001797.1:CDS |
CAGCATGGCCAACAAGATTA+AGG | 0.340276 | 1:+26845821 | None:intergenic |
GTGCAAACATTCCATTCAAA+TGG | 0.340458 | 1:-26848188 | MsaT001797.1:CDS |
CAAAACAAGTATCGCGTAAC+AGG | 0.352897 | 1:+26847522 | None:intergenic |
AGCTTGCATCGCCAAGTCTA+TGG | 0.355095 | 1:-26847050 | MsaT001797.1:CDS |
ATTGTTACATCTGTTTCTTC+CGG | 0.360494 | 1:-26845853 | MsaT001797.1:CDS |
AGGCCAATGCATTCAGTTAT+GGG | 0.362686 | 1:-26847265 | MsaT001797.1:CDS |
TCAGAGACCTCAGTTACTTC+AGG | 0.363567 | 1:-26846755 | MsaT001797.1:CDS |
TCTGAACTCTCGCCTGGCTC+AGG | 0.364727 | 1:+26845982 | None:intergenic |
TCTTTGCCTAACTATGTTAT+CGG | 0.373360 | 1:-26846986 | MsaT001797.1:CDS |
TTCGAATGCCTTAATCTTGT+TGG | 0.377583 | 1:-26845829 | MsaT001797.1:CDS |
TATTAAAGTTGTTGCTGATC+AGG | 0.379034 | 1:-26847449 | MsaT001797.1:CDS |
GTCATCGTCACAGTTGCATT+TGG | 0.382217 | 1:+26848320 | None:intergenic |
GATTTAAGGTTGAGGTTGAT+AGG | 0.383654 | 1:-26847009 | MsaT001797.1:CDS |
GGTGTATCTGCAACTGCTAA+TGG | 0.389182 | 1:-26848348 | MsaT001797.1:CDS |
TGAGGAAAGCCTCTAGCATT+TGG | 0.394008 | 1:+26846060 | None:intergenic |
CTTAATCTTGTTGGCCATGC+TGG | 0.394439 | 1:-26845820 | MsaT001797.1:CDS |
TGGAGGTGGAAGATTTCCTT+TGG | 0.397483 | 1:-26847113 | MsaT001797.1:CDS |
AACTCATGACCCTTGCTCTT+CGG | 0.399844 | 1:-26846038 | MsaT001797.1:CDS |
GGAAGTTCAAAAGCCGTAAC+TGG | 0.402042 | 1:-26845720 | MsaT001797.1:CDS |
CTTGCAACAGAATCGGCTTT+CGG | 0.402801 | 1:+26845617 | None:intergenic |
ATGTATAAAGGAACAGCATC+TGG | 0.402875 | 1:-26848396 | MsaT001797.1:CDS |
TCTATTAACATTGTCGTTGT+CGG | 0.405681 | 1:+26845912 | None:intergenic |
CATCTAAATCAGGCAAGTTA+AGG | 0.412834 | 1:+26845767 | None:intergenic |
AAGGCCAATGCATTCAGTTA+TGG | 0.414233 | 1:-26847266 | MsaT001797.1:CDS |
CTTGAAAGTCCTCACTGCAT+TGG | 0.415305 | 1:-26848058 | MsaT001797.1:CDS |
AAGCGAAAGGCGAGGGAGCT+TGG | 0.417170 | 1:-26847958 | MsaT001797.1:CDS |
ATAGGACCTAATTTCCCTTC+AGG | 0.424148 | 1:+26845569 | None:intergenic |
CAGAGGTCTGCAAGTCTTGT+TGG | 0.425682 | 1:-26845935 | MsaT001797.1:CDS |
TCCAAAAGAATAACTTCAAA+GGG | 0.428364 | 1:+26845790 | None:intergenic |
GATCAAAGTGATGAGGGTTA+TGG | 0.428611 | 1:+26848020 | None:intergenic |
ACTTCAAATCCATCTAAATC+AGG | 0.429557 | 1:+26845757 | None:intergenic |
AAGATTAAGGCATTCGAATC+CGG | 0.430168 | 1:+26845834 | None:intergenic |
TGACACATTTGTTTAATAGC+TGG | 0.431512 | 1:-26848125 | MsaT001797.1:CDS |
GAAGGATGTGTACGAGTGAC+CGG | 0.443598 | 1:-26846721 | MsaT001797.1:CDS |
AAGCTCAGAAGAAGAATTGC+GGG | 0.444376 | 1:-26845674 | MsaT001797.1:CDS |
CCCTATGCTTCTTAAAGTAA+AGG | 0.446192 | 1:-26847998 | MsaT001797.1:CDS |
GGCATTCGGATCGCAGCAAC+CGG | 0.448019 | 1:+26847595 | None:intergenic |
GATGTTGGATCAATGTATAA+AGG | 0.452982 | 1:-26848408 | None:intergenic |
ATGCTATGGACAATTCAGAT+AGG | 0.455663 | 1:-26847141 | MsaT001797.1:CDS |
CCCTTGACTCTTACAACATC+CGG | 0.458403 | 1:+26847694 | None:intergenic |
TTCTATACCGATCACTGATC+CGG | 0.461024 | 1:-26847713 | MsaT001797.1:CDS |
TGAAATAAAGAAGCTCAATA+GGG | 0.466212 | 1:+26848217 | None:intergenic |
CTGCTTGCTGCTGCGAGTAG+TGG | 0.466733 | 1:-26847637 | MsaT001797.1:CDS |
TTGAAGTTACCGCAAGGATC+CGG | 0.468641 | 1:-26845741 | MsaT001797.1:CDS |
AACCTCACTCATGAATTGAA+TGG | 0.471461 | 1:-26847751 | MsaT001797.1:CDS |
GCGAAATCGAGCATTGCAAC+AGG | 0.472193 | 1:-26847359 | MsaT001797.1:CDS |
CAACACTAAGCATTGGCATT+CGG | 0.473530 | 1:+26847581 | None:intergenic |
TACGAGTGACCGGGCATTCG+AGG | 0.475000 | 1:-26846711 | MsaT001797.1:CDS |
TCAGATAGGGACGGTGGAGG+TGG | 0.475127 | 1:-26847127 | MsaT001797.1:CDS |
TTTCAGAAAGTCATGAGTAA+TGG | 0.476424 | 1:-26847295 | MsaT001797.1:CDS |
CTAGTGAAGAGGCTAGATCT+TGG | 0.479339 | 1:-26847492 | MsaT001797.1:CDS |
GAAAGTCATGAGTAATGGAA+TGG | 0.480686 | 1:-26847290 | MsaT001797.1:CDS |
TGCAAACATTCCATTCAAAT+GGG | 0.481437 | 1:-26848187 | MsaT001797.1:CDS |
CAGAAATTTCTCCAGAAACT+AGG | 0.482342 | 1:-26845880 | MsaT001797.1:CDS |
CTTAGTGTTGGCGATTTCAA+AGG | 0.483799 | 1:-26847568 | MsaT001797.1:CDS |
TGTAAGAGTCAAGGGAGATA+AGG | 0.484906 | 1:-26847686 | MsaT001797.1:CDS |
GAGCATTGCAACAGGAGAAA+AGG | 0.488985 | 1:-26847351 | MsaT001797.1:CDS |
ACCTCACTCATGAATTGAAT+GGG | 0.492396 | 1:-26847750 | MsaT001797.1:CDS |
CAACAGCGATAGGCCAGTTA+CGG | 0.493707 | 1:+26845707 | None:intergenic |
TTAGTGTTGGCGATTTCAAA+GGG | 0.496178 | 1:-26847567 | MsaT001797.1:CDS |
GACGACTCTGAACTCTCGCC+TGG | 0.499228 | 1:+26845976 | None:intergenic |
AGGAACTTGATAGATGGTAA+TGG | 0.501172 | 1:-26846923 | MsaT001797.1:CDS |
GAAACTTATTGTTGATTCGA+TGG | 0.502928 | 1:-26847200 | MsaT001797.1:CDS |
GTCCAAAAGAATAACTTCAA+AGG | 0.504471 | 1:+26845789 | None:intergenic |
ATAATGAAACAGAATGAAGC+TGG | 0.506215 | 1:-26847919 | MsaT001797.1:CDS |
TAACAGGCCTCCGTTACCTC+AGG | 0.507753 | 1:+26847538 | None:intergenic |
GGATGGTTACCGCGGTAGAA+TGG | 0.508582 | 1:+26846004 | None:intergenic |
TCAAAGTTTCCTCGAATGCC+CGG | 0.509649 | 1:+26846702 | None:intergenic |
GCGGTAACCATCCCTGAGCC+AGG | 0.509860 | 1:-26845994 | MsaT001797.1:CDS |
AGTGGAGTTTCTGTTGATGC+AGG | 0.512394 | 1:-26847619 | MsaT001797.1:CDS |
CAAGTCTATGGCTTTATGCA+AGG | 0.514591 | 1:-26847038 | MsaT001797.1:CDS |
CTGAACTCTCGCCTGGCTCA+GGG | 0.514998 | 1:+26845983 | None:intergenic |
TTATTGTTGATTCGATGGTA+AGG | 0.515750 | 1:-26847195 | MsaT001797.1:CDS |
CCTTTACTTTAAGAAGCATA+GGG | 0.517469 | 1:+26847998 | None:intergenic |
GCGAATCCTTGCAACAGAAT+CGG | 0.518862 | 1:+26845610 | None:intergenic |
CAGAGACCTCAGTTACTTCA+GGG | 0.520849 | 1:-26846754 | MsaT001797.1:CDS |
TCGTCACCGATAACATAGTT+AGG | 0.524597 | 1:+26846980 | None:intergenic |
TACTACCTTGGTTAAACTGT+CGG | 0.524792 | 1:-26847833 | MsaT001797.1:CDS |
CAAGATCTAGCCTCTTCACT+AGG | 0.525819 | 1:+26847493 | None:intergenic |
GGAGAAAAGGAACGCTATGA+TGG | 0.526316 | 1:-26847338 | MsaT001797.1:CDS |
ACCTTTACTTTAAGAAGCAT+AGG | 0.527347 | 1:+26847997 | None:intergenic |
AAAGTCATGAGTAATGGAAT+GGG | 0.532334 | 1:-26847289 | MsaT001797.1:CDS |
TGTTATTGGCAGTCAATGAA+AGG | 0.541552 | 1:-26846099 | MsaT001797.1:intron |
AGTTTCTGTTGATGCAGGAC+CGG | 0.541642 | 1:-26847614 | MsaT001797.1:CDS |
AAGTCTATGGCTTTATGCAA+GGG | 0.542582 | 1:-26847037 | MsaT001797.1:CDS |
GATGCCTAATGTTGATAAAA+CGG | 0.545342 | 1:-26847779 | MsaT001797.1:CDS |
GATCCAAATTCCTTGTTCAG+AGG | 0.550462 | 1:-26845952 | MsaT001797.1:CDS |
TGTTGCTGATCAGGTAGCCG+TGG | 0.554230 | 1:-26847440 | MsaT001797.1:CDS |
AAATCGCCAACACTAAGCAT+TGG | 0.554872 | 1:+26847574 | None:intergenic |
GAACTTGATGAATGATGCTA+TGG | 0.555490 | 1:-26847155 | MsaT001797.1:CDS |
TCCCATTCAATTCATGAGTG+AGG | 0.557270 | 1:+26847749 | None:intergenic |
TTGCGATTCTTCTAGAATTG+CGG | 0.559822 | 1:+26847405 | None:intergenic |
GAACTTGATAGATGGTAATG+GGG | 0.559862 | 1:-26846921 | MsaT001797.1:CDS |
AGAGTTCTTGCTGAAGCGAA+AGG | 0.561096 | 1:-26847971 | MsaT001797.1:CDS |
ATGTTATCGGTGACGAGAAG+AGG | 0.561390 | 1:-26846973 | MsaT001797.1:CDS |
CAGCATGATTTGAAATGTGT+GGG | 0.561684 | 1:+26848092 | None:intergenic |
CCGGATGTTGTAAGAGTCAA+GGG | 0.561701 | 1:-26847694 | MsaT001797.1:CDS |
TGCTATGGACAATTCAGATA+GGG | 0.564858 | 1:-26847140 | MsaT001797.1:CDS |
GCCGTTAAAGCAACAGCGAT+AGG | 0.568669 | 1:+26845697 | None:intergenic |
CCAAAACATTTCATCTCCAA+AGG | 0.569295 | 1:+26847097 | None:intergenic |
CAGATACACCCAATAAGAGC+AGG | 0.570029 | 1:+26848361 | None:intergenic |
ATGGTTAGGAACTTGATAGA+TGG | 0.571670 | 1:-26846929 | MsaT001797.1:CDS |
ATTCTAGAATGGCAGAAAGT+CGG | 0.574057 | 1:-26848273 | MsaT001797.1:CDS |
GTAGTTGAAACCGAAGAGCA+AGG | 0.574554 | 1:+26846028 | None:intergenic |
CGAATGCCAATGCTTAGTGT+TGG | 0.574855 | 1:-26847580 | MsaT001797.1:CDS |
CATATGCAAGAAGATAATCC+AGG | 0.578098 | 1:-26846672 | MsaT001797.1:intron |
CTTGCATAAAGCCATAGACT+TGG | 0.578350 | 1:+26847039 | None:intergenic |
TCCGGATGTTGTAAGAGTCA+AGG | 0.578653 | 1:-26847695 | MsaT001797.1:CDS |
ATTCTGTTGCAAGGATTCGC+CGG | 0.579730 | 1:-26845607 | MsaT001797.1:CDS |
TTTGGTACTTCCTAGTGAAG+AGG | 0.580067 | 1:-26847503 | MsaT001797.1:CDS |
GAACGCTATGATGGCGAGTG+AGG | 0.581349 | 1:-26847329 | MsaT001797.1:CDS |
CTTGCTGAAGCGAAAGGCGA+GGG | 0.583282 | 1:-26847965 | MsaT001797.1:CDS |
CTTCAGGGAGGCTTGCAGGA+AGG | 0.584384 | 1:-26846739 | MsaT001797.1:CDS |
ACATCACCGTTAGACGAGCT+TGG | 0.587602 | 1:+26846821 | None:intergenic |
CGGAATCTGGAAGTCGAGGA+AGG | 0.587888 | 1:-26846871 | MsaT001797.1:CDS |
AATTCAGATAGGGACGGTGG+AGG | 0.588433 | 1:-26847130 | MsaT001797.1:CDS |
CATAGGGATCAAAGTGATGA+GGG | 0.588741 | 1:+26848014 | None:intergenic |
CGAAAGCCGATTCTGTTGCA+AGG | 0.594166 | 1:-26845616 | MsaT001797.1:CDS |
AGGGAGCTTGGAATTGAGTA+CGG | 0.594494 | 1:-26847946 | MsaT001797.1:CDS |
AATCCCATAACTGAATGCAT+TGG | 0.595120 | 1:+26847262 | None:intergenic |
AAGGATGTGTACGAGTGACC+GGG | 0.595446 | 1:-26846720 | MsaT001797.1:CDS |
GACTTGCAGACCTCTGAACA+AGG | 0.597590 | 1:+26845942 | None:intergenic |
CAAGCTCAGAAGAAGAATTG+CGG | 0.599403 | 1:-26845675 | MsaT001797.1:CDS |
GTGACGATGACTCGAGCTGG+TGG | 0.600417 | 1:-26848308 | MsaT001797.1:CDS |
TTTGAACTTCCGGATCCTTG+CGG | 0.601307 | 1:+26845732 | None:intergenic |
TGTTATCGGTGACGAGAAGA+GGG | 0.602377 | 1:-26846972 | MsaT001797.1:CDS |
CAAAGGGGCATGCACCAGCA+TGG | 0.602581 | 1:+26845806 | None:intergenic |
CAATTGAAAAGATTCTAGAA+TGG | 0.604554 | 1:-26848284 | MsaT001797.1:CDS |
AGAGCAAGGGTCATGAGTTG+AGG | 0.607034 | 1:+26846042 | None:intergenic |
ACAACATCCGGATCAGTGAT+CGG | 0.610257 | 1:+26847706 | None:intergenic |
AGTGTTGGCGATTTCAAAGG+GGG | 0.610884 | 1:-26847565 | MsaT001797.1:CDS |
GTTGCTGATCAGGTAGCCGT+GGG | 0.610984 | 1:-26847439 | MsaT001797.1:CDS |
TTGGCGGAATCTGGAAGTCG+AGG | 0.612913 | 1:-26846875 | MsaT001797.1:CDS |
GCATAGGGATCAAAGTGATG+AGG | 0.615167 | 1:+26848013 | None:intergenic |
TCTTGCTGAAGCGAAAGGCG+AGG | 0.616326 | 1:-26847966 | MsaT001797.1:CDS |
TTGAACATGAATATGCAACT+TGG | 0.616599 | 1:-26846847 | MsaT001797.1:CDS |
TAGTTGAAACCGAAGAGCAA+GGG | 0.619553 | 1:+26846029 | None:intergenic |
GTGCATGTTAGATTTGACAT+AGG | 0.621016 | 1:-26846800 | MsaT001797.1:CDS |
AACTTGATAGATGGTAATGG+GGG | 0.622142 | 1:-26846920 | MsaT001797.1:CDS |
ACTGTGACGATGACTCGAGC+TGG | 0.623009 | 1:-26848311 | MsaT001797.1:CDS |
GGGGACGCCTGAGGTAACGG+AGG | 0.625733 | 1:-26847545 | MsaT001797.1:CDS |
ACTCTCGCCTGGCTCAGGGA+TGG | 0.633721 | 1:+26845987 | None:intergenic |
TGGAGACCAAGCTCGTCTAA+CGG | 0.635163 | 1:-26846827 | MsaT001797.1:CDS |
TCACTCATGAATTGAATGGG+AGG | 0.638853 | 1:-26847747 | MsaT001797.1:CDS |
ACTTATGAGAGAGAAATTGG+AGG | 0.641195 | 1:-26847383 | MsaT001797.1:CDS |
TCAGCATGATTTGAAATGTG+TGG | 0.647150 | 1:+26848091 | None:intergenic |
GATTCGATGGTAAGGACAAG+CGG | 0.650665 | 1:-26847187 | MsaT001797.1:CDS |
GACAATTCAGATAGGGACGG+TGG | 0.651579 | 1:-26847133 | MsaT001797.1:CDS |
ATGGATTTGAAGTTACCGCA+AGG | 0.658657 | 1:-26845747 | MsaT001797.1:CDS |
TCATGAGTAATGGAATGGGA+AGG | 0.660080 | 1:-26847285 | MsaT001797.1:CDS |
GATGGCGAGTGAGGCTAGAG+CGG | 0.664178 | 1:-26847320 | MsaT001797.1:CDS |
TGTTCAGTACCAAATGCTAG+AGG | 0.667794 | 1:-26846069 | MsaT001797.1:CDS |
GGTTGCAGAACTGTGCTGTG+TGG | 0.669623 | 1:-26847801 | MsaT001797.1:CDS |
AGTTTCCGACAGTTTAACCA+AGG | 0.671343 | 1:+26847828 | None:intergenic |
AAGCCTCCCTGAAGTAACTG+AGG | 0.673026 | 1:+26846748 | None:intergenic |
ATGGACAATTCAGATAGGGA+CGG | 0.674602 | 1:-26847136 | MsaT001797.1:CDS |
GTGTTGGCGATTTCAAAGGG+GGG | 0.681741 | 1:-26847564 | MsaT001797.1:CDS |
TAGTGTTGGCGATTTCAAAG+GGG | 0.690768 | 1:-26847566 | MsaT001797.1:CDS |
TCAACTACGCCATTCTACCG+CGG | 0.695471 | 1:-26846013 | MsaT001797.1:CDS |
TGCGGCATGAGAAAGACCCA+CGG | 0.697860 | 1:+26847423 | None:intergenic |
AGACCTCAGTTACTTCAGGG+AGG | 0.704562 | 1:-26846751 | MsaT001797.1:CDS |
TGGCTCAGGGATGGTTACCG+CGG | 0.718477 | 1:+26845996 | None:intergenic |
CCAAAAGAATAACTTCAAAG+GGG | 0.718508 | 1:+26845791 | None:intergenic |
CACATGAAACCAATGCAGTG+AGG | 0.730416 | 1:+26848049 | None:intergenic |
AGCATGATTTGAAATGTGTG+GGG | 0.747887 | 1:+26848093 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 26845576 | 26848418 | 26845576 | ID=MsaG001797 |
Chr1 | mRNA | 26845576 | 26848418 | 26845576 | ID=MsaT001797.1;Parent=MsaG001797 |
Chr1 | exon | 26845576 | 26846109 | 26845576 | ID=MsaT001797.1.exon2;Parent=MsaT001797.1 |
Chr1 | CDS | 26845576 | 26846109 | 26845576 | ID=cds.MsaT001797.1;Parent=MsaT001797.1 |
Chr1 | exon | 26846673 | 26848418 | 26846673 | ID=MsaT001797.1.exon1;Parent=MsaT001797.1 |
Chr1 | CDS | 26846673 | 26848418 | 26846673 | ID=cds.MsaT001797.1;Parent=MsaT001797.1 |
Gene Sequence |
Protein sequence |