Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG001797 | XP_024631074.1 | 95.916 | 759 | 30 | 1 | 1 | 758 | 1 | 759 | 0.0 | 1441 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG001797 | sp|Q0WPQ2|ETR2_ARATH | 54.235 | 791 | 302 | 15 | 1 | 756 | 1 | 766 | 0.0 | 786 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG001797 | tr|A0A072VSP2|A0A072VSP2_MEDTR | 95.916 | 759 | 30 | 1 | 1 | 758 | 1 | 759 | 0.0 | 1441 |
| Gene ID | Type | Classification |
|---|---|---|
| MsaG001797 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG001797 | MtrunA17_Chr1g0168161 | 95.916 | 759 | 30 | 1 | 1 | 758 | 1 | 759 | 0.0 | 1441 |
| MsaG001797 | MtrunA17_Chr1g0186431 | 71.429 | 763 | 209 | 7 | 1 | 759 | 1 | 758 | 0.0 | 1089 |
| MsaG001797 | MtrunA17_Chr7g0274831 | 54.681 | 737 | 320 | 7 | 25 | 756 | 31 | 758 | 0.0 | 821 |
| MsaG001797 | MtrunA17_Chr1g0190021 | 53.351 | 746 | 332 | 7 | 19 | 756 | 18 | 755 | 0.0 | 785 |
| MsaG001797 | MtrunA17_Chr4g0013831 | 37.703 | 740 | 440 | 15 | 28 | 757 | 5 | 733 | 2.12e-155 | 469 |
| MsaG001797 | MtrunA17_Chr7g0269631 | 39.304 | 575 | 323 | 11 | 28 | 588 | 5 | 567 | 5.80e-114 | 358 |
| MsaG001797 | MtrunA17_Chr4g0077091 | 64.865 | 74 | 24 | 2 | 688 | 759 | 1 | 74 | 2.69e-23 | 94.0 |
| MsaG001797 | MtrunA17_Chr8g0377481 | 31.579 | 133 | 81 | 3 | 632 | 756 | 837 | 967 | 1.29e-13 | 75.1 |
| MsaG001797 | MtrunA17_Chr3g0122391 | 29.412 | 136 | 85 | 3 | 632 | 759 | 895 | 1027 | 2.54e-12 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG001797 | AT3G23150.1 | 54.235 | 791 | 302 | 15 | 1 | 756 | 1 | 766 | 0.0 | 786 |
| MsaG001797 | AT3G04580.2 | 52.279 | 746 | 340 | 11 | 23 | 757 | 22 | 762 | 0.0 | 742 |
| MsaG001797 | AT3G04580.1 | 52.279 | 746 | 340 | 11 | 23 | 757 | 22 | 762 | 0.0 | 742 |
| MsaG001797 | AT3G23150.2 | 56.271 | 606 | 224 | 11 | 1 | 582 | 1 | 589 | 0.0 | 624 |
| MsaG001797 | AT1G04310.1 | 48.320 | 625 | 287 | 9 | 10 | 612 | 12 | 622 | 0.0 | 536 |
| MsaG001797 | AT1G04310.2 | 48.320 | 625 | 287 | 9 | 10 | 612 | 12 | 622 | 0.0 | 536 |
| MsaG001797 | AT1G66340.1 | 37.834 | 748 | 426 | 17 | 28 | 757 | 4 | 730 | 6.83e-154 | 466 |
| MsaG001797 | AT2G40940.1 | 41.202 | 466 | 268 | 5 | 42 | 503 | 17 | 480 | 2.60e-110 | 348 |
| MsaG001797 | AT5G35750.1 | 33.835 | 133 | 64 | 3 | 632 | 743 | 1031 | 1160 | 2.44e-12 | 71.2 |
Find 183 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTATGCATATTGGGTTTAA+TGG | 0.188176 | 1:-26845646 | MsaT001797.1:CDS |
| GTTAAACTGTCGGAAACTTT+AGG | 0.198346 | 1:-26847823 | MsaT001797.1:CDS |
| CCCCTTTGAAGTTATTCTTT+TGG | 0.208877 | 1:-26845791 | MsaT001797.1:CDS |
| ATGGCTTTATGCAAGGGTTT+TGG | 0.236524 | 1:-26847031 | MsaT001797.1:CDS |
| TTGTTTAATAGCTGGACTTA+TGG | 0.240419 | 1:-26848117 | MsaT001797.1:CDS |
| ATGAAATAAAGAAGCTCAAT+AGG | 0.260762 | 1:+26848216 | None:intergenic |
| GCAACTTATGAGAGAGAAAT+TGG | 0.272205 | 1:-26847386 | MsaT001797.1:CDS |
| TAACAATACATCCTAGTTTC+TGG | 0.278898 | 1:+26845869 | None:intergenic |
| TTAAACTGTCGGAAACTTTA+GGG | 0.291922 | 1:-26847822 | MsaT001797.1:CDS |
| ATTGCTTTCATTGTACTTTG+TGG | 0.294523 | 1:-26848150 | MsaT001797.1:CDS |
| CTTAACTTGCCTGATTTAGA+TGG | 0.294640 | 1:-26845766 | MsaT001797.1:CDS |
| AGACCTCTGAACAAGGAATT+TGG | 0.296650 | 1:+26845949 | None:intergenic |
| GATTCTTGTGTTTCAAGTTT+TGG | 0.305051 | 1:-26846894 | MsaT001797.1:CDS |
| GTTACTTCAGGGAGGCTTGC+AGG | 0.306598 | 1:-26846743 | MsaT001797.1:CDS |
| GCCTATCGCTGTTGCTTTAA+CGG | 0.315525 | 1:-26845698 | MsaT001797.1:CDS |
| CCTTTGGAGATGAAATGTTT+TGG | 0.321337 | 1:-26847097 | MsaT001797.1:CDS |
| GGAACTTGATAGATGGTAAT+GGG | 0.332716 | 1:-26846922 | MsaT001797.1:CDS |
| CTGTTACGCGATACTTGTTT+TGG | 0.339387 | 1:-26847521 | MsaT001797.1:CDS |
| CAGCATGGCCAACAAGATTA+AGG | 0.340276 | 1:+26845821 | None:intergenic |
| GTGCAAACATTCCATTCAAA+TGG | 0.340458 | 1:-26848188 | MsaT001797.1:CDS |
| CAAAACAAGTATCGCGTAAC+AGG | 0.352897 | 1:+26847522 | None:intergenic |
| AGCTTGCATCGCCAAGTCTA+TGG | 0.355095 | 1:-26847050 | MsaT001797.1:CDS |
| ATTGTTACATCTGTTTCTTC+CGG | 0.360494 | 1:-26845853 | MsaT001797.1:CDS |
| AGGCCAATGCATTCAGTTAT+GGG | 0.362686 | 1:-26847265 | MsaT001797.1:CDS |
| TCAGAGACCTCAGTTACTTC+AGG | 0.363567 | 1:-26846755 | MsaT001797.1:CDS |
| TCTGAACTCTCGCCTGGCTC+AGG | 0.364727 | 1:+26845982 | None:intergenic |
| TCTTTGCCTAACTATGTTAT+CGG | 0.373360 | 1:-26846986 | MsaT001797.1:CDS |
| TTCGAATGCCTTAATCTTGT+TGG | 0.377583 | 1:-26845829 | MsaT001797.1:CDS |
| TATTAAAGTTGTTGCTGATC+AGG | 0.379034 | 1:-26847449 | MsaT001797.1:CDS |
| GTCATCGTCACAGTTGCATT+TGG | 0.382217 | 1:+26848320 | None:intergenic |
| GATTTAAGGTTGAGGTTGAT+AGG | 0.383654 | 1:-26847009 | MsaT001797.1:CDS |
| GGTGTATCTGCAACTGCTAA+TGG | 0.389182 | 1:-26848348 | MsaT001797.1:CDS |
| TGAGGAAAGCCTCTAGCATT+TGG | 0.394008 | 1:+26846060 | None:intergenic |
| CTTAATCTTGTTGGCCATGC+TGG | 0.394439 | 1:-26845820 | MsaT001797.1:CDS |
| TGGAGGTGGAAGATTTCCTT+TGG | 0.397483 | 1:-26847113 | MsaT001797.1:CDS |
| AACTCATGACCCTTGCTCTT+CGG | 0.399844 | 1:-26846038 | MsaT001797.1:CDS |
| GGAAGTTCAAAAGCCGTAAC+TGG | 0.402042 | 1:-26845720 | MsaT001797.1:CDS |
| CTTGCAACAGAATCGGCTTT+CGG | 0.402801 | 1:+26845617 | None:intergenic |
| ATGTATAAAGGAACAGCATC+TGG | 0.402875 | 1:-26848396 | MsaT001797.1:CDS |
| TCTATTAACATTGTCGTTGT+CGG | 0.405681 | 1:+26845912 | None:intergenic |
| CATCTAAATCAGGCAAGTTA+AGG | 0.412834 | 1:+26845767 | None:intergenic |
| AAGGCCAATGCATTCAGTTA+TGG | 0.414233 | 1:-26847266 | MsaT001797.1:CDS |
| CTTGAAAGTCCTCACTGCAT+TGG | 0.415305 | 1:-26848058 | MsaT001797.1:CDS |
| AAGCGAAAGGCGAGGGAGCT+TGG | 0.417170 | 1:-26847958 | MsaT001797.1:CDS |
| ATAGGACCTAATTTCCCTTC+AGG | 0.424148 | 1:+26845569 | None:intergenic |
| CAGAGGTCTGCAAGTCTTGT+TGG | 0.425682 | 1:-26845935 | MsaT001797.1:CDS |
| TCCAAAAGAATAACTTCAAA+GGG | 0.428364 | 1:+26845790 | None:intergenic |
| GATCAAAGTGATGAGGGTTA+TGG | 0.428611 | 1:+26848020 | None:intergenic |
| ACTTCAAATCCATCTAAATC+AGG | 0.429557 | 1:+26845757 | None:intergenic |
| AAGATTAAGGCATTCGAATC+CGG | 0.430168 | 1:+26845834 | None:intergenic |
| TGACACATTTGTTTAATAGC+TGG | 0.431512 | 1:-26848125 | MsaT001797.1:CDS |
| GAAGGATGTGTACGAGTGAC+CGG | 0.443598 | 1:-26846721 | MsaT001797.1:CDS |
| AAGCTCAGAAGAAGAATTGC+GGG | 0.444376 | 1:-26845674 | MsaT001797.1:CDS |
| CCCTATGCTTCTTAAAGTAA+AGG | 0.446192 | 1:-26847998 | MsaT001797.1:CDS |
| GGCATTCGGATCGCAGCAAC+CGG | 0.448019 | 1:+26847595 | None:intergenic |
| GATGTTGGATCAATGTATAA+AGG | 0.452982 | 1:-26848408 | None:intergenic |
| ATGCTATGGACAATTCAGAT+AGG | 0.455663 | 1:-26847141 | MsaT001797.1:CDS |
| CCCTTGACTCTTACAACATC+CGG | 0.458403 | 1:+26847694 | None:intergenic |
| TTCTATACCGATCACTGATC+CGG | 0.461024 | 1:-26847713 | MsaT001797.1:CDS |
| TGAAATAAAGAAGCTCAATA+GGG | 0.466212 | 1:+26848217 | None:intergenic |
| CTGCTTGCTGCTGCGAGTAG+TGG | 0.466733 | 1:-26847637 | MsaT001797.1:CDS |
| TTGAAGTTACCGCAAGGATC+CGG | 0.468641 | 1:-26845741 | MsaT001797.1:CDS |
| AACCTCACTCATGAATTGAA+TGG | 0.471461 | 1:-26847751 | MsaT001797.1:CDS |
| GCGAAATCGAGCATTGCAAC+AGG | 0.472193 | 1:-26847359 | MsaT001797.1:CDS |
| CAACACTAAGCATTGGCATT+CGG | 0.473530 | 1:+26847581 | None:intergenic |
| TACGAGTGACCGGGCATTCG+AGG | 0.475000 | 1:-26846711 | MsaT001797.1:CDS |
| TCAGATAGGGACGGTGGAGG+TGG | 0.475127 | 1:-26847127 | MsaT001797.1:CDS |
| TTTCAGAAAGTCATGAGTAA+TGG | 0.476424 | 1:-26847295 | MsaT001797.1:CDS |
| CTAGTGAAGAGGCTAGATCT+TGG | 0.479339 | 1:-26847492 | MsaT001797.1:CDS |
| GAAAGTCATGAGTAATGGAA+TGG | 0.480686 | 1:-26847290 | MsaT001797.1:CDS |
| TGCAAACATTCCATTCAAAT+GGG | 0.481437 | 1:-26848187 | MsaT001797.1:CDS |
| CAGAAATTTCTCCAGAAACT+AGG | 0.482342 | 1:-26845880 | MsaT001797.1:CDS |
| CTTAGTGTTGGCGATTTCAA+AGG | 0.483799 | 1:-26847568 | MsaT001797.1:CDS |
| TGTAAGAGTCAAGGGAGATA+AGG | 0.484906 | 1:-26847686 | MsaT001797.1:CDS |
| GAGCATTGCAACAGGAGAAA+AGG | 0.488985 | 1:-26847351 | MsaT001797.1:CDS |
| ACCTCACTCATGAATTGAAT+GGG | 0.492396 | 1:-26847750 | MsaT001797.1:CDS |
| CAACAGCGATAGGCCAGTTA+CGG | 0.493707 | 1:+26845707 | None:intergenic |
| TTAGTGTTGGCGATTTCAAA+GGG | 0.496178 | 1:-26847567 | MsaT001797.1:CDS |
| GACGACTCTGAACTCTCGCC+TGG | 0.499228 | 1:+26845976 | None:intergenic |
| AGGAACTTGATAGATGGTAA+TGG | 0.501172 | 1:-26846923 | MsaT001797.1:CDS |
| GAAACTTATTGTTGATTCGA+TGG | 0.502928 | 1:-26847200 | MsaT001797.1:CDS |
| GTCCAAAAGAATAACTTCAA+AGG | 0.504471 | 1:+26845789 | None:intergenic |
| ATAATGAAACAGAATGAAGC+TGG | 0.506215 | 1:-26847919 | MsaT001797.1:CDS |
| TAACAGGCCTCCGTTACCTC+AGG | 0.507753 | 1:+26847538 | None:intergenic |
| GGATGGTTACCGCGGTAGAA+TGG | 0.508582 | 1:+26846004 | None:intergenic |
| TCAAAGTTTCCTCGAATGCC+CGG | 0.509649 | 1:+26846702 | None:intergenic |
| GCGGTAACCATCCCTGAGCC+AGG | 0.509860 | 1:-26845994 | MsaT001797.1:CDS |
| AGTGGAGTTTCTGTTGATGC+AGG | 0.512394 | 1:-26847619 | MsaT001797.1:CDS |
| CAAGTCTATGGCTTTATGCA+AGG | 0.514591 | 1:-26847038 | MsaT001797.1:CDS |
| CTGAACTCTCGCCTGGCTCA+GGG | 0.514998 | 1:+26845983 | None:intergenic |
| TTATTGTTGATTCGATGGTA+AGG | 0.515750 | 1:-26847195 | MsaT001797.1:CDS |
| CCTTTACTTTAAGAAGCATA+GGG | 0.517469 | 1:+26847998 | None:intergenic |
| GCGAATCCTTGCAACAGAAT+CGG | 0.518862 | 1:+26845610 | None:intergenic |
| CAGAGACCTCAGTTACTTCA+GGG | 0.520849 | 1:-26846754 | MsaT001797.1:CDS |
| TCGTCACCGATAACATAGTT+AGG | 0.524597 | 1:+26846980 | None:intergenic |
| TACTACCTTGGTTAAACTGT+CGG | 0.524792 | 1:-26847833 | MsaT001797.1:CDS |
| CAAGATCTAGCCTCTTCACT+AGG | 0.525819 | 1:+26847493 | None:intergenic |
| GGAGAAAAGGAACGCTATGA+TGG | 0.526316 | 1:-26847338 | MsaT001797.1:CDS |
| ACCTTTACTTTAAGAAGCAT+AGG | 0.527347 | 1:+26847997 | None:intergenic |
| AAAGTCATGAGTAATGGAAT+GGG | 0.532334 | 1:-26847289 | MsaT001797.1:CDS |
| TGTTATTGGCAGTCAATGAA+AGG | 0.541552 | 1:-26846099 | MsaT001797.1:intron |
| AGTTTCTGTTGATGCAGGAC+CGG | 0.541642 | 1:-26847614 | MsaT001797.1:CDS |
| AAGTCTATGGCTTTATGCAA+GGG | 0.542582 | 1:-26847037 | MsaT001797.1:CDS |
| GATGCCTAATGTTGATAAAA+CGG | 0.545342 | 1:-26847779 | MsaT001797.1:CDS |
| GATCCAAATTCCTTGTTCAG+AGG | 0.550462 | 1:-26845952 | MsaT001797.1:CDS |
| TGTTGCTGATCAGGTAGCCG+TGG | 0.554230 | 1:-26847440 | MsaT001797.1:CDS |
| AAATCGCCAACACTAAGCAT+TGG | 0.554872 | 1:+26847574 | None:intergenic |
| GAACTTGATGAATGATGCTA+TGG | 0.555490 | 1:-26847155 | MsaT001797.1:CDS |
| TCCCATTCAATTCATGAGTG+AGG | 0.557270 | 1:+26847749 | None:intergenic |
| TTGCGATTCTTCTAGAATTG+CGG | 0.559822 | 1:+26847405 | None:intergenic |
| GAACTTGATAGATGGTAATG+GGG | 0.559862 | 1:-26846921 | MsaT001797.1:CDS |
| AGAGTTCTTGCTGAAGCGAA+AGG | 0.561096 | 1:-26847971 | MsaT001797.1:CDS |
| ATGTTATCGGTGACGAGAAG+AGG | 0.561390 | 1:-26846973 | MsaT001797.1:CDS |
| CAGCATGATTTGAAATGTGT+GGG | 0.561684 | 1:+26848092 | None:intergenic |
| CCGGATGTTGTAAGAGTCAA+GGG | 0.561701 | 1:-26847694 | MsaT001797.1:CDS |
| TGCTATGGACAATTCAGATA+GGG | 0.564858 | 1:-26847140 | MsaT001797.1:CDS |
| GCCGTTAAAGCAACAGCGAT+AGG | 0.568669 | 1:+26845697 | None:intergenic |
| CCAAAACATTTCATCTCCAA+AGG | 0.569295 | 1:+26847097 | None:intergenic |
| CAGATACACCCAATAAGAGC+AGG | 0.570029 | 1:+26848361 | None:intergenic |
| ATGGTTAGGAACTTGATAGA+TGG | 0.571670 | 1:-26846929 | MsaT001797.1:CDS |
| ATTCTAGAATGGCAGAAAGT+CGG | 0.574057 | 1:-26848273 | MsaT001797.1:CDS |
| GTAGTTGAAACCGAAGAGCA+AGG | 0.574554 | 1:+26846028 | None:intergenic |
| CGAATGCCAATGCTTAGTGT+TGG | 0.574855 | 1:-26847580 | MsaT001797.1:CDS |
| CATATGCAAGAAGATAATCC+AGG | 0.578098 | 1:-26846672 | MsaT001797.1:intron |
| CTTGCATAAAGCCATAGACT+TGG | 0.578350 | 1:+26847039 | None:intergenic |
| TCCGGATGTTGTAAGAGTCA+AGG | 0.578653 | 1:-26847695 | MsaT001797.1:CDS |
| ATTCTGTTGCAAGGATTCGC+CGG | 0.579730 | 1:-26845607 | MsaT001797.1:CDS |
| TTTGGTACTTCCTAGTGAAG+AGG | 0.580067 | 1:-26847503 | MsaT001797.1:CDS |
| GAACGCTATGATGGCGAGTG+AGG | 0.581349 | 1:-26847329 | MsaT001797.1:CDS |
| CTTGCTGAAGCGAAAGGCGA+GGG | 0.583282 | 1:-26847965 | MsaT001797.1:CDS |
| CTTCAGGGAGGCTTGCAGGA+AGG | 0.584384 | 1:-26846739 | MsaT001797.1:CDS |
| ACATCACCGTTAGACGAGCT+TGG | 0.587602 | 1:+26846821 | None:intergenic |
| CGGAATCTGGAAGTCGAGGA+AGG | 0.587888 | 1:-26846871 | MsaT001797.1:CDS |
| AATTCAGATAGGGACGGTGG+AGG | 0.588433 | 1:-26847130 | MsaT001797.1:CDS |
| CATAGGGATCAAAGTGATGA+GGG | 0.588741 | 1:+26848014 | None:intergenic |
| CGAAAGCCGATTCTGTTGCA+AGG | 0.594166 | 1:-26845616 | MsaT001797.1:CDS |
| AGGGAGCTTGGAATTGAGTA+CGG | 0.594494 | 1:-26847946 | MsaT001797.1:CDS |
| AATCCCATAACTGAATGCAT+TGG | 0.595120 | 1:+26847262 | None:intergenic |
| AAGGATGTGTACGAGTGACC+GGG | 0.595446 | 1:-26846720 | MsaT001797.1:CDS |
| GACTTGCAGACCTCTGAACA+AGG | 0.597590 | 1:+26845942 | None:intergenic |
| CAAGCTCAGAAGAAGAATTG+CGG | 0.599403 | 1:-26845675 | MsaT001797.1:CDS |
| GTGACGATGACTCGAGCTGG+TGG | 0.600417 | 1:-26848308 | MsaT001797.1:CDS |
| TTTGAACTTCCGGATCCTTG+CGG | 0.601307 | 1:+26845732 | None:intergenic |
| TGTTATCGGTGACGAGAAGA+GGG | 0.602377 | 1:-26846972 | MsaT001797.1:CDS |
| CAAAGGGGCATGCACCAGCA+TGG | 0.602581 | 1:+26845806 | None:intergenic |
| CAATTGAAAAGATTCTAGAA+TGG | 0.604554 | 1:-26848284 | MsaT001797.1:CDS |
| AGAGCAAGGGTCATGAGTTG+AGG | 0.607034 | 1:+26846042 | None:intergenic |
| ACAACATCCGGATCAGTGAT+CGG | 0.610257 | 1:+26847706 | None:intergenic |
| AGTGTTGGCGATTTCAAAGG+GGG | 0.610884 | 1:-26847565 | MsaT001797.1:CDS |
| GTTGCTGATCAGGTAGCCGT+GGG | 0.610984 | 1:-26847439 | MsaT001797.1:CDS |
| TTGGCGGAATCTGGAAGTCG+AGG | 0.612913 | 1:-26846875 | MsaT001797.1:CDS |
| GCATAGGGATCAAAGTGATG+AGG | 0.615167 | 1:+26848013 | None:intergenic |
| TCTTGCTGAAGCGAAAGGCG+AGG | 0.616326 | 1:-26847966 | MsaT001797.1:CDS |
| TTGAACATGAATATGCAACT+TGG | 0.616599 | 1:-26846847 | MsaT001797.1:CDS |
| TAGTTGAAACCGAAGAGCAA+GGG | 0.619553 | 1:+26846029 | None:intergenic |
| GTGCATGTTAGATTTGACAT+AGG | 0.621016 | 1:-26846800 | MsaT001797.1:CDS |
| AACTTGATAGATGGTAATGG+GGG | 0.622142 | 1:-26846920 | MsaT001797.1:CDS |
| ACTGTGACGATGACTCGAGC+TGG | 0.623009 | 1:-26848311 | MsaT001797.1:CDS |
| GGGGACGCCTGAGGTAACGG+AGG | 0.625733 | 1:-26847545 | MsaT001797.1:CDS |
| ACTCTCGCCTGGCTCAGGGA+TGG | 0.633721 | 1:+26845987 | None:intergenic |
| TGGAGACCAAGCTCGTCTAA+CGG | 0.635163 | 1:-26846827 | MsaT001797.1:CDS |
| TCACTCATGAATTGAATGGG+AGG | 0.638853 | 1:-26847747 | MsaT001797.1:CDS |
| ACTTATGAGAGAGAAATTGG+AGG | 0.641195 | 1:-26847383 | MsaT001797.1:CDS |
| TCAGCATGATTTGAAATGTG+TGG | 0.647150 | 1:+26848091 | None:intergenic |
| GATTCGATGGTAAGGACAAG+CGG | 0.650665 | 1:-26847187 | MsaT001797.1:CDS |
| GACAATTCAGATAGGGACGG+TGG | 0.651579 | 1:-26847133 | MsaT001797.1:CDS |
| ATGGATTTGAAGTTACCGCA+AGG | 0.658657 | 1:-26845747 | MsaT001797.1:CDS |
| TCATGAGTAATGGAATGGGA+AGG | 0.660080 | 1:-26847285 | MsaT001797.1:CDS |
| GATGGCGAGTGAGGCTAGAG+CGG | 0.664178 | 1:-26847320 | MsaT001797.1:CDS |
| TGTTCAGTACCAAATGCTAG+AGG | 0.667794 | 1:-26846069 | MsaT001797.1:CDS |
| GGTTGCAGAACTGTGCTGTG+TGG | 0.669623 | 1:-26847801 | MsaT001797.1:CDS |
| AGTTTCCGACAGTTTAACCA+AGG | 0.671343 | 1:+26847828 | None:intergenic |
| AAGCCTCCCTGAAGTAACTG+AGG | 0.673026 | 1:+26846748 | None:intergenic |
| ATGGACAATTCAGATAGGGA+CGG | 0.674602 | 1:-26847136 | MsaT001797.1:CDS |
| GTGTTGGCGATTTCAAAGGG+GGG | 0.681741 | 1:-26847564 | MsaT001797.1:CDS |
| TAGTGTTGGCGATTTCAAAG+GGG | 0.690768 | 1:-26847566 | MsaT001797.1:CDS |
| TCAACTACGCCATTCTACCG+CGG | 0.695471 | 1:-26846013 | MsaT001797.1:CDS |
| TGCGGCATGAGAAAGACCCA+CGG | 0.697860 | 1:+26847423 | None:intergenic |
| AGACCTCAGTTACTTCAGGG+AGG | 0.704562 | 1:-26846751 | MsaT001797.1:CDS |
| TGGCTCAGGGATGGTTACCG+CGG | 0.718477 | 1:+26845996 | None:intergenic |
| CCAAAAGAATAACTTCAAAG+GGG | 0.718508 | 1:+26845791 | None:intergenic |
| CACATGAAACCAATGCAGTG+AGG | 0.730416 | 1:+26848049 | None:intergenic |
| AGCATGATTTGAAATGTGTG+GGG | 0.747887 | 1:+26848093 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 26845576 | 26848418 | 26845576 | ID=MsaG001797 |
| Chr1 | mRNA | 26845576 | 26848418 | 26845576 | ID=MsaT001797.1;Parent=MsaG001797 |
| Chr1 | exon | 26845576 | 26846109 | 26845576 | ID=MsaT001797.1.exon2;Parent=MsaT001797.1 |
| Chr1 | CDS | 26845576 | 26846109 | 26845576 | ID=cds.MsaT001797.1;Parent=MsaT001797.1 |
| Chr1 | exon | 26846673 | 26848418 | 26846673 | ID=MsaT001797.1.exon1;Parent=MsaT001797.1 |
| Chr1 | CDS | 26846673 | 26848418 | 26846673 | ID=cds.MsaT001797.1;Parent=MsaT001797.1 |
| Gene Sequence |
| Protein sequence |