Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG002130 | RHN78917.1 | 94.218 | 588 | 33 | 1 | 1 | 588 | 17 | 603 | 0.0 | 1068 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG002130 | sp|P93755|C3H30_ARATH | 48.516 | 674 | 290 | 19 | 1 | 647 | 34 | 677 | 0.0 | 539 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG002130 | tr|A0A396JW33|A0A396JW33_MEDTR | 94.218 | 588 | 33 | 1 | 1 | 588 | 17 | 603 | 0.0 | 1068 |
Gene ID | Type | Classification |
---|---|---|
MsaG002130 | TF | C3H |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG002130 | MtrunA17_Chr1g0171151 | 94.218 | 588 | 33 | 1 | 1 | 588 | 17 | 603 | 0.0 | 1068 |
MsaG002130 | MtrunA17_Chr3g0088521 | 56.848 | 679 | 249 | 17 | 1 | 648 | 31 | 696 | 0.0 | 658 |
MsaG002130 | MtrunA17_Chr7g0257831 | 54.018 | 672 | 269 | 20 | 1 | 647 | 33 | 689 | 0.0 | 612 |
MsaG002130 | MtrunA17_Chr3g0092171 | 45.887 | 462 | 158 | 10 | 1 | 451 | 69 | 449 | 1.26e-122 | 374 |
MsaG002130 | MtrunA17_Chr5g0437251 | 35.038 | 665 | 337 | 19 | 15 | 636 | 30 | 642 | 1.45e-110 | 348 |
MsaG002130 | MtrunA17_Chr5g0430211 | 36.458 | 672 | 336 | 21 | 15 | 638 | 35 | 663 | 1.27e-108 | 343 |
MsaG002130 | MtrunA17_Chr1g0187591 | 48.494 | 332 | 150 | 4 | 14 | 343 | 32 | 344 | 5.84e-102 | 325 |
MsaG002130 | MtrunA17_Chr3g0092221 | 46.465 | 396 | 149 | 10 | 64 | 451 | 12 | 352 | 9.67e-101 | 313 |
MsaG002130 | MtrunA17_Chr3g0113651 | 42.771 | 332 | 130 | 4 | 14 | 345 | 9 | 280 | 1.04e-87 | 283 |
MsaG002130 | MtrunA17_Chr3g0105131 | 36.117 | 443 | 194 | 12 | 36 | 474 | 37 | 394 | 4.98e-72 | 241 |
MsaG002130 | MtrunA17_Chr3g0105101 | 33.817 | 482 | 207 | 16 | 1 | 472 | 11 | 390 | 3.88e-69 | 230 |
MsaG002130 | MtrunA17_Chr3g0105141 | 54.198 | 131 | 59 | 1 | 205 | 334 | 13 | 143 | 1.41e-49 | 170 |
MsaG002130 | MtrunA17_Chr6g0487481 | 65.421 | 107 | 37 | 0 | 224 | 330 | 99 | 205 | 3.71e-49 | 176 |
MsaG002130 | MtrunA17_Chr8g0389561 | 60.504 | 119 | 47 | 0 | 224 | 342 | 77 | 195 | 4.29e-49 | 176 |
MsaG002130 | MtrunA17_Chr2g0324781 | 63.964 | 111 | 40 | 0 | 228 | 338 | 77 | 187 | 7.02e-48 | 173 |
MsaG002130 | MtrunA17_Chr3g0135351 | 61.468 | 109 | 41 | 1 | 223 | 330 | 48 | 156 | 5.11e-46 | 164 |
MsaG002130 | MtrunA17_Chr4g0040391 | 58.879 | 107 | 44 | 0 | 224 | 330 | 56 | 162 | 4.20e-44 | 160 |
MsaG002130 | MtrunA17_Chr3g0105121 | 45.625 | 160 | 79 | 3 | 227 | 380 | 8 | 165 | 9.93e-38 | 144 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG002130 | AT2G41900.1 | 48.516 | 674 | 290 | 19 | 1 | 647 | 34 | 677 | 0.0 | 539 |
MsaG002130 | AT5G12850.1 | 47.281 | 662 | 289 | 23 | 5 | 638 | 32 | 661 | 3.20e-174 | 513 |
MsaG002130 | AT5G58620.1 | 49.552 | 335 | 147 | 2 | 12 | 344 | 11 | 325 | 2.57e-109 | 343 |
MsaG002130 | AT2G40140.2 | 35.429 | 652 | 286 | 20 | 15 | 647 | 33 | 568 | 1.79e-99 | 317 |
MsaG002130 | AT2G40140.1 | 35.429 | 652 | 286 | 20 | 15 | 647 | 33 | 568 | 1.79e-99 | 317 |
MsaG002130 | AT3G55980.1 | 40.144 | 416 | 197 | 8 | 15 | 423 | 30 | 400 | 9.49e-94 | 301 |
MsaG002130 | AT3G55980.2 | 40.144 | 416 | 197 | 8 | 15 | 423 | 97 | 467 | 3.33e-93 | 301 |
MsaG002130 | AT1G03790.1 | 60.563 | 142 | 48 | 3 | 206 | 343 | 64 | 201 | 1.18e-51 | 184 |
MsaG002130 | AT2G25900.2 | 64.545 | 110 | 39 | 0 | 224 | 333 | 86 | 195 | 3.25e-51 | 180 |
MsaG002130 | AT2G25900.1 | 64.545 | 110 | 39 | 0 | 224 | 333 | 86 | 195 | 3.25e-51 | 180 |
MsaG002130 | AT5G07500.1 | 59.504 | 121 | 49 | 0 | 210 | 330 | 34 | 154 | 7.47e-50 | 174 |
MsaG002130 | AT2G19810.1 | 49.432 | 176 | 76 | 4 | 159 | 334 | 22 | 184 | 2.09e-49 | 176 |
MsaG002130 | AT4G29190.1 | 54.167 | 144 | 65 | 1 | 224 | 367 | 75 | 217 | 8.09e-49 | 175 |
MsaG002130 | AT5G44260.1 | 56.204 | 137 | 53 | 2 | 198 | 333 | 36 | 166 | 1.83e-46 | 169 |
Find 160 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTTTCAAGCTTTGCATATT+AGG | 0.177408 | 1:-32891698 | None:intergenic |
AGTTCTGGTTTGCTTGAAAA+TGG | 0.189066 | 1:+32891806 | MsaT002130.1:CDS |
AACAACAGAGGAAGGGATTT+TGG | 0.205426 | 1:-32892992 | None:intergenic |
CAAGCCCCTTTCCTGAATTC+AGG | 0.251729 | 1:-32892100 | None:intergenic |
CGATTAATGAGGCGGGAATT+TGG | 0.252456 | 1:+32891390 | MsaT002130.1:CDS |
AATTCTTGAGAAACTTCTTT+TGG | 0.276329 | 1:+32891721 | MsaT002130.1:CDS |
AGGCCACTGCCTTCGTTAAC+TGG | 0.276593 | 1:+32892265 | MsaT002130.1:CDS |
TCTGTTGATTCTTCTAGTTC+TGG | 0.291419 | 1:+32891791 | MsaT002130.1:CDS |
AAAATCCCTTCCTCTGTTGT+TGG | 0.292864 | 1:+32892994 | MsaT002130.1:CDS |
ACAGAGAAGTTTGCATCTTC+TGG | 0.293830 | 1:+32893198 | MsaT002130.1:CDS |
GCATGCCTTGCCCTGAATTC+AGG | 0.298337 | 1:+32892089 | MsaT002130.1:CDS |
TTGATGGTTGCTGCCACTTA+TGG | 0.302833 | 1:+32891464 | MsaT002130.1:CDS |
GCCCTTCACTGTGCTGCTTC+TGG | 0.307051 | 1:+32891566 | MsaT002130.1:CDS |
GAGACTGGTTCAAGCCTTCT+AGG | 0.307052 | 1:-32892883 | None:intergenic |
TAGGCCTAGTTGTAATAAAA+AGG | 0.309683 | 1:+32892210 | MsaT002130.1:CDS |
CTCATTCTCAAGTGCTGCTT+GGG | 0.310662 | 1:+32892441 | MsaT002130.1:CDS |
AATAGATTAAATTTGCGAAT+TGG | 0.323983 | 1:-32893232 | None:intergenic |
TCCTAGTTCTTGTCGGTCTA+AGG | 0.332234 | 1:+32892621 | MsaT002130.1:CDS |
GGCTGCTGCAATGAATCTTT+TGG | 0.332820 | 1:+32892342 | MsaT002130.1:CDS |
TGAGCACAAAACTCCTTTGA+TGG | 0.333522 | 1:+32891448 | MsaT002130.1:CDS |
TCATTTGAACATAAAATCAT+TGG | 0.355518 | 1:+32893111 | MsaT002130.1:CDS |
ATTTGGTACGGTCGACAAAA+TGG | 0.358517 | 1:+32891407 | MsaT002130.1:CDS |
AATATGCTGAGCTATTTAGA+TGG | 0.359724 | 1:+32892553 | MsaT002130.1:CDS |
ATATCTGATTGGTCGTTATA+TGG | 0.363137 | 1:+32893054 | MsaT002130.1:CDS |
AAGACGATGCTCATCATTCT+TGG | 0.366937 | 1:-32892818 | None:intergenic |
CCAGTTGATCCATCATTTCC+TGG | 0.368573 | 1:+32891908 | MsaT002130.1:CDS |
ATGAGGATGCATTGTGCATT+TGG | 0.377230 | 1:-32893092 | None:intergenic |
TGTATGCAAGCGATGAATTT+CGG | 0.383744 | 1:+32891945 | MsaT002130.1:CDS |
AGCTGCATAGTGTTAGTTCT+AGG | 0.387153 | 1:+32892959 | MsaT002130.1:CDS |
TGGGCACAGCAAAATGTTCT+AGG | 0.387831 | 1:+32892460 | MsaT002130.1:CDS |
TTCTCTCCGGGATGCACATA+TGG | 0.394353 | 1:-32892028 | None:intergenic |
CCCGTTCACAATCTCATGAT+TGG | 0.398242 | 1:+32891996 | MsaT002130.1:CDS |
CTGCCTTCGTTAACTGGATC+TGG | 0.398343 | 1:+32892271 | MsaT002130.1:CDS |
CCAGGAAATGATGGATCAAC+TGG | 0.407420 | 1:-32891908 | None:intergenic |
AATTCAGGAAAGGGGCTTGT+AGG | 0.407924 | 1:+32892104 | MsaT002130.1:CDS |
TCTCATTCTCAAGTGCTGCT+TGG | 0.415243 | 1:+32892440 | MsaT002130.1:CDS |
AGTCGTGTTCGATACTGATC+TGG | 0.416868 | 1:-32892178 | None:intergenic |
TGAGGGCTCAGTGGGGAGAC+TGG | 0.425522 | 1:-32892898 | None:intergenic |
CTCCTCCGAGCCTTCTCTCC+GGG | 0.428697 | 1:-32892040 | None:intergenic |
GGGAATTATTCTGTAGGACT+TGG | 0.433684 | 1:-32893161 | None:intergenic |
AAGAGGTCTTCAAGATTTGA+TGG | 0.444188 | 1:-32892652 | None:intergenic |
TTTCAATCTAGTAGTCGGTT+GGG | 0.445265 | 1:+32892490 | MsaT002130.1:CDS |
AACTGGATACTGTTTATTCT+CGG | 0.446949 | 1:-32891891 | None:intergenic |
AACTTCTCTGTATTCGTCTC+AGG | 0.452345 | 1:-32893186 | None:intergenic |
GGAACAACAATGAGATCAAC+AGG | 0.452808 | 1:-32891674 | None:intergenic |
CTCTGTTGTTGGACCACCTA+CGG | 0.455551 | 1:+32893005 | MsaT002130.1:CDS |
AAGAAGAGCCTAATCTATCA+TGG | 0.461395 | 1:+32893136 | MsaT002130.1:CDS |
CTTCACTGTGCTGCTTCTGG+TGG | 0.465162 | 1:+32891569 | MsaT002130.1:CDS |
AAGCCCCTTTCCTGAATTCA+GGG | 0.465251 | 1:-32892099 | None:intergenic |
TGGTAGTATTGATGTTATGA+AGG | 0.465621 | 1:+32891484 | MsaT002130.1:CDS |
GACCAATCAGATATCTCATT+AGG | 0.468837 | 1:-32893045 | None:intergenic |
TCTCCTCCGAGCCTTCTCTC+CGG | 0.470377 | 1:-32892041 | None:intergenic |
ACAAAATTTCCGCAGAAAAG+AGG | 0.471696 | 1:-32892669 | None:intergenic |
CATTTGAACATAAAATCATT+GGG | 0.474936 | 1:+32893112 | MsaT002130.1:CDS |
AACATCAATACTACCATAAG+TGG | 0.474991 | 1:-32891477 | None:intergenic |
AACCCGGTCCTAGTTCTTGT+CGG | 0.478599 | 1:+32892614 | MsaT002130.1:CDS |
AGTGTTAGTTCTAGGGAACT+TGG | 0.481159 | 1:+32892967 | MsaT002130.1:CDS |
GAAGGTTATACTCTCGTATC+CGG | 0.481900 | 1:+32891502 | MsaT002130.1:CDS |
GAGGAAATGCAGACATTTGA+GGG | 0.482099 | 1:-32892915 | None:intergenic |
GACAGCATATTAGTATTTGA+AGG | 0.484710 | 1:-32892793 | None:intergenic |
TTCACTGTGCTGCTTCTGGT+GGG | 0.489511 | 1:+32891570 | MsaT002130.1:CDS |
AGACGATGCTCATCATTCTT+GGG | 0.490668 | 1:-32892817 | None:intergenic |
GATGGAAGGAAGAGACTGAC+GGG | 0.491230 | 1:-32892375 | None:intergenic |
CTCATGGAATATTCGAGTGC+TGG | 0.497753 | 1:+32892149 | MsaT002130.1:CDS |
CTTGCCCTGAATTCAGGAAA+GGG | 0.500592 | 1:+32892095 | MsaT002130.1:CDS |
AACAGCTCAAGTCATTCATA+AGG | 0.503787 | 1:-32892585 | None:intergenic |
TGAGGAAATGCAGACATTTG+AGG | 0.507215 | 1:-32892916 | None:intergenic |
GAAGCAAGTACCAGTAAACT+TGG | 0.508787 | 1:-32891314 | None:intergenic |
GTGAGGATTCTTATTTCCGC+GGG | 0.510979 | 1:+32891614 | MsaT002130.1:CDS |
AGGAAAGGGGCTTGTAGGCA+TGG | 0.513477 | 1:+32892109 | MsaT002130.1:CDS |
CAGACATTTGAGGGCTCAGT+GGG | 0.513831 | 1:-32892906 | None:intergenic |
GTCACCACCTTCTCCTGTGG+TGG | 0.515604 | 1:+32891856 | MsaT002130.1:CDS |
GAACACGACTCTGTAAAGAT+AGG | 0.519096 | 1:+32892191 | MsaT002130.1:CDS |
CTCCTAATGAGATATCTGAT+TGG | 0.519165 | 1:+32893043 | MsaT002130.1:CDS |
ACCAGAAGCAGCACAGTGAA+GGG | 0.521479 | 1:-32891567 | None:intergenic |
AGGCTCGGAGGAGAGACCTT+AGG | 0.523990 | 1:+32892050 | MsaT002130.1:CDS |
CAGGCTGAATGTTGCAAGCG+CGG | 0.524558 | 1:-32892522 | None:intergenic |
GTTAGTTGTGTCAATAGCAA+TGG | 0.528128 | 1:+32891644 | MsaT002130.1:CDS |
TTCAAGCTTTGCATATTAGG+AGG | 0.529947 | 1:-32891695 | None:intergenic |
GCGGTAGCATGTCACCTAGA+AGG | 0.531087 | 1:+32892869 | MsaT002130.1:CDS |
TTCTCTGTATTCGTCTCAGG+TGG | 0.532355 | 1:-32893183 | None:intergenic |
TTCGAATCCACCACAGGAGA+AGG | 0.533536 | 1:-32891863 | None:intergenic |
CTCTGTATTCGTCTCAGGTG+GGG | 0.535371 | 1:-32893181 | None:intergenic |
AGGAGCTTCTTCGATTAATG+AGG | 0.538092 | 1:+32891379 | MsaT002130.1:CDS |
CCAATCATGAGATTGTGAAC+GGG | 0.538143 | 1:-32891996 | None:intergenic |
ATATGCTGAGCTATTTAGAT+GGG | 0.543705 | 1:+32892554 | MsaT002130.1:CDS |
GCCTCTGATAATATATCTGT+TGG | 0.544875 | 1:+32891749 | MsaT002130.1:CDS |
CACCAGAAGCAGCACAGTGA+AGG | 0.545082 | 1:-32891568 | None:intergenic |
GCTGCATAGTGTTAGTTCTA+GGG | 0.553291 | 1:+32892960 | MsaT002130.1:CDS |
TGCATCCCGGAGAGAAGGCT+CGG | 0.553406 | 1:+32892035 | MsaT002130.1:CDS |
AGACCGACAAGAACTAGGAC+CGG | 0.553527 | 1:-32892617 | None:intergenic |
AGCTTCTTCGATTAATGAGG+CGG | 0.556906 | 1:+32891382 | MsaT002130.1:CDS |
TCCAATCATGAGATTGTGAA+CGG | 0.559478 | 1:-32891997 | None:intergenic |
GCTTCTCACAATGACTCTGA+AGG | 0.563152 | 1:+32891332 | MsaT002130.1:CDS |
GATGCAGATGAACGCGGTGA+AGG | 0.563206 | 1:-32892298 | None:intergenic |
GGTGGTCCAACAACAGAGGA+AGG | 0.567580 | 1:-32893000 | None:intergenic |
GCTTCTTCGATTAATGAGGC+GGG | 0.570758 | 1:+32891383 | MsaT002130.1:CDS |
CTCGGAGGAGAGACCTTAGG+AGG | 0.570887 | 1:+32892053 | MsaT002130.1:CDS |
GCCTTAGACCGACAAGAACT+AGG | 0.575103 | 1:-32892622 | None:intergenic |
GTAAATTTCGAATCCACCAC+AGG | 0.575410 | 1:-32891869 | None:intergenic |
TGATGTGAATTCCGCTTGCA+TGG | 0.576297 | 1:+32891529 | MsaT002130.1:CDS |
ATAGCAGCTGATTCATGTGA+AGG | 0.576310 | 1:-32892736 | None:intergenic |
TAGCAGCTGATTCATGTGAA+GGG | 0.576933 | 1:-32892735 | None:intergenic |
TTGGACCACCTACGGACCCA+TGG | 0.576953 | 1:+32893013 | MsaT002130.1:CDS |
GCGGAATTCACATCAACCTC+CGG | 0.577460 | 1:-32891521 | None:intergenic |
TAAGTGGCAGCAACCATCAA+AGG | 0.581005 | 1:-32891461 | None:intergenic |
ATGAGATGCCATTTCCAGAA+GGG | 0.584083 | 1:-32892423 | None:intergenic |
GTCGTGTTCGATACTGATCT+GGG | 0.586400 | 1:-32892177 | None:intergenic |
GGATGGAAGGAAGAGACTGA+CGG | 0.587373 | 1:-32892376 | None:intergenic |
ATATGTGCATCCCGGAGAGA+AGG | 0.587617 | 1:+32892030 | MsaT002130.1:CDS |
GATAAGTGTGAATATGCTCA+TGG | 0.587938 | 1:+32892133 | MsaT002130.1:CDS |
GTGACATGCTACCGCATGAA+GGG | 0.588287 | 1:-32892861 | None:intergenic |
AGAAGAGCCTAATCTATCAT+GGG | 0.588660 | 1:+32893137 | MsaT002130.1:CDS |
CCTTGCCCTGAATTCAGGAA+AGG | 0.589700 | 1:+32892094 | MsaT002130.1:CDS |
ACTTGGACCCATGATAGATT+AGG | 0.592397 | 1:-32893144 | None:intergenic |
CCTTTCCTGAATTCAGGGCA+AGG | 0.594200 | 1:-32892094 | None:intergenic |
CACACGATGAAAAGGAATTG+AGG | 0.597745 | 1:+32892245 | MsaT002130.1:CDS |
TTGCCCTGAATTCAGGAAAG+GGG | 0.599832 | 1:+32892096 | MsaT002130.1:CDS |
AGTGTCACCACCTTCTCCTG+TGG | 0.600051 | 1:+32891853 | MsaT002130.1:CDS |
GACCGACAAGAACTAGGACC+GGG | 0.601622 | 1:-32892616 | None:intergenic |
TTGAGCTGTTTCTCACAACC+CGG | 0.602356 | 1:+32892598 | MsaT002130.1:CDS |
ACAACTAACATTTGCACCCG+CGG | 0.603059 | 1:-32891630 | None:intergenic |
TAGGTATTCTGACCCAGCAA+TGG | 0.603203 | 1:+32892699 | MsaT002130.1:CDS |
CGGTCGACAAAATGGCTCTA+CGG | 0.603364 | 1:+32891415 | MsaT002130.1:CDS |
AGCTGTAAGAGAACCTCCTA+AGG | 0.606098 | 1:-32892066 | None:intergenic |
TCTCTGTATTCGTCTCAGGT+GGG | 0.607073 | 1:-32893182 | None:intergenic |
AATGAGGCGGGAATTTGGTA+CGG | 0.609266 | 1:+32891395 | MsaT002130.1:CDS |
TGCTGCTGTTTCTCGCGATG+AGG | 0.610108 | 1:-32892934 | None:intergenic |
TCATTTGGTGTCCCTTCATG+CGG | 0.610299 | 1:+32892850 | MsaT002130.1:CDS |
AGCAGCTGATTCATGTGAAG+GGG | 0.610846 | 1:-32892734 | None:intergenic |
GATCCAGTTAACGAAGGCAG+TGG | 0.612013 | 1:-32892268 | None:intergenic |
TAAGACCATGGGTCCGTAGG+TGG | 0.612212 | 1:-32893018 | None:intergenic |
TGTGAGGATTCTTATTTCCG+CGG | 0.612292 | 1:+32891613 | MsaT002130.1:CDS |
GAGTGTCCATATGTGCATCC+CGG | 0.612767 | 1:+32892022 | MsaT002130.1:CDS |
CAGGTGGGGAATTATTCTGT+AGG | 0.615860 | 1:-32893167 | None:intergenic |
TGAGATGCCATTTCCAGAAG+GGG | 0.617123 | 1:-32892422 | None:intergenic |
CTAATGTTGTTGATGCTGTG+AGG | 0.619443 | 1:+32891597 | MsaT002130.1:CDS |
ACCAACAGATATATTATCAG+AGG | 0.623686 | 1:-32891750 | None:intergenic |
GAATAAGACCATGGGTCCGT+AGG | 0.624229 | 1:-32893021 | None:intergenic |
CATTAGGAGAATAAGACCAT+GGG | 0.624382 | 1:-32893029 | None:intergenic |
GGTGACATGCTACCGCATGA+AGG | 0.626913 | 1:-32892862 | None:intergenic |
GAAGGTGGTGACACTGAAGG+AGG | 0.631733 | 1:-32891845 | None:intergenic |
GGAGAAGGTGGTGACACTGA+AGG | 0.632383 | 1:-32891848 | None:intergenic |
TCATTAGGAGAATAAGACCA+TGG | 0.632729 | 1:-32893030 | None:intergenic |
AATGAGATGCCATTTCCAGA+AGG | 0.634273 | 1:-32892424 | None:intergenic |
GCAGACATTTGAGGGCTCAG+TGG | 0.644297 | 1:-32892907 | None:intergenic |
GAATCCACCACAGGAGAAGG+TGG | 0.649733 | 1:-32891860 | None:intergenic |
GTGGTCCAACAACAGAGGAA+GGG | 0.664346 | 1:-32892999 | None:intergenic |
CGTAGGTGGTCCAACAACAG+AGG | 0.665010 | 1:-32893004 | None:intergenic |
ATTGTGAACGGGAACAACGA+AGG | 0.665165 | 1:-32891985 | None:intergenic |
ATTGCTGGGTCAGAATACCT+AGG | 0.669043 | 1:-32892697 | None:intergenic |
ATCCCGGAGAGAAGGCTCGG+AGG | 0.669076 | 1:+32892038 | MsaT002130.1:CDS |
AAGGTGGTGACACTGAAGGA+GGG | 0.677347 | 1:-32891844 | None:intergenic |
GGTTATACTCTCGTATCCGG+AGG | 0.688899 | 1:+32891505 | MsaT002130.1:CDS |
GAGATGCCATTTCCAGAAGG+GGG | 0.701139 | 1:-32892421 | None:intergenic |
AAAGCAGATGCAGATGAACG+CGG | 0.707165 | 1:-32892304 | None:intergenic |
ACGCCAGATCCAGTTAACGA+AGG | 0.708633 | 1:-32892274 | None:intergenic |
ATGGAAGGAAGAGACTGACG+GGG | 0.715204 | 1:-32892374 | None:intergenic |
TGGAAGGAAGAGACTGACGG+GGG | 0.740862 | 1:-32892373 | None:intergenic |
AGACATTTGAGGGCTCAGTG+GGG | 0.787595 | 1:-32892905 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 32891278 | 32893248 | 32891278 | ID=MsaG002130 |
Chr1 | mRNA | 32891278 | 32893248 | 32891278 | ID=MsaT002130.1;Parent=MsaG002130 |
Chr1 | exon | 32891278 | 32893248 | 32891278 | ID=MsaT002130.1.exon1;Parent=MsaT002130.1 |
Chr1 | CDS | 32891278 | 32893248 | 32891278 | ID=cds.MsaT002130.1;Parent=MsaT002130.1 |
Gene Sequence |
Protein sequence |