AlfalfaGEDB | MsaG002291

M. sativa ssp. caerulea / MsaG002291

KEGG: -
GO: -
PFAM: PF13912.9

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG002291	KEH41549.1	85.246	244	34	1	1	242	32	275	6.01e-136	394

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG002291	tr\|A0A072VHP5\|A0A072VHP5_MEDTR	85.246	244	34	1	1	242	32	275	2.87e-136	394

TFs/TRs:

Gene ID	Type	Classification
MsaG002291	TF	C2H2

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000083	MsaG002291	0.832797	1.394526e-55	4.376016e-53
MsaG000188	MsaG002291	0.819951	1.552995e-52	3.411189e-50
MsaG000400	MsaG002291	0.819720	1.752460e-52	3.825589e-50
MsaG001030	MsaG002291	0.809104	3.806348e-50	6.361266e-48
MsaG001584	MsaG002291	0.805688	2.002389e-49	3.084726e-47
MsaG001835	MsaG002291	0.816938	7.424573e-52	1.507892e-49
MsaG001861	MsaG002291	0.820496	1.166494e-52	2.599445e-50
MsaG002146	MsaG002291	0.838066	6.589440e-57	2.421685e-54
MsaG002291	MsaG002414	0.812801	6.075872e-51	1.111487e-48
MsaG002291	MsaG002539	0.811801	1.001851e-50	1.787953e-48
MsaG002291	MsaG002564	0.828951	1.210574e-54	3.399925e-52
MsaG002291	MsaG002660	0.802495	9.173601e-49	1.312536e-46
MsaG002291	MsaG002668	0.811171	1.371158e-50	2.409474e-48
MsaG002291	MsaG002681	0.806042	1.688076e-49	2.622253e-47
MsaG002291	MsaG002727	0.824698	1.242205e-53	3.099041e-51
MsaG002291	MsaG002929	0.816353	1.002706e-51	2.006054e-49
MsaG002291	MsaG003000	0.814577	2.480561e-51	4.744059e-49
MsaG002291	MsaG003332	0.842362	5.037026e-58	2.119172e-55
MsaG002291	MsaG003335	0.817323	6.090128e-52	1.249190e-49
MsaG002291	MsaG003339	0.815360	1.666205e-51	3.250390e-49
MsaG002291	MsaG003690	0.804733	3.165641e-49	4.769626e-47
MsaG002291	MsaG004147	0.824569	1.332125e-53	3.311752e-51
MsaG002291	MsaG004154	0.847840	1.694195e-59	8.534545e-57
MsaG002291	MsaG004308	0.812775	6.154697e-51	1.125172e-48
MsaG002291	MsaG004622	0.813087	5.263671e-51	9.698080e-49
MsaG002291	MsaG004893	0.812331	7.691319e-51	1.390637e-48
MsaG002291	MsaG005016	0.800730	2.103128e-48	2.890858e-46
MsaG002291	MsaG005457	0.808309	5.617253e-50	9.209467e-48
MsaG002291	MsaG005775	0.803261	6.383582e-49	9.295674e-47
MsaG002291	MsaG005776	0.801798	1.274437e-48	1.794627e-46
MsaG002291	MsaG006013	0.818656	3.053274e-52	6.482011e-50
MsaG002291	MsaG006049	0.803030	7.123003e-49	1.031710e-46
MsaG002291	MsaG006256	0.809140	3.738779e-50	6.253792e-48
MsaG002291	MsaG006669	0.800225	2.662136e-48	3.617593e-46
MsaG002291	MsaG006679	0.804503	3.533341e-49	5.295363e-47
MsaG002291	MsaG006841	0.816274	1.044110e-51	2.084705e-49
MsaG002291	MsaG006871	0.872623	5.660472e-67	7.336733e-64
MsaG002291	MsaG007290	0.800916	1.927030e-48	2.659862e-46
MsaG002291	MsaG007399	0.807339	9.011107e-50	1.443380e-47
MsaG002291	MsaG007580	0.824300	1.539834e-53	3.800280e-51
MsaG002291	MsaG007700	0.844813	1.122203e-58	5.110967e-56
MsaG002291	MsaG008033	0.827829	2.251354e-54	6.127387e-52
MsaG002291	MsaG008474	0.826697	4.191076e-54	1.105079e-51
MsaG002291	MsaG009178	0.806500	1.352945e-49	2.124678e-47
MsaG002291	MsaG009475	0.808663	4.724278e-50	7.812085e-48
MsaG002291	MsaG009532	0.813087	5.262644e-51	9.696261e-49
MsaG002291	MsaG009762	0.806165	1.591034e-49	2.478730e-47
MsaG002291	MsaG009848	0.807503	8.320242e-50	1.337953e-47
MsaG002291	MsaG009852	0.832267	1.883905e-55	5.821225e-53
MsaG002291	MsaG009926	0.806996	1.064559e-49	1.691351e-47
MsaG002291	MsaG010051	0.803073	6.977160e-49	1.011618e-46
MsaG002291	MsaG010075	0.803184	6.621231e-49	9.624728e-47
MsaG002291	MsaG010206	0.806840	1.147679e-49	1.816722e-47
MsaG002291	MsaG010331	0.839932	2.177492e-57	8.482345e-55
MsaG002291	MsaG010594	0.808383	5.417778e-50	8.898123e-48
MsaG002291	MsaG011335	0.806778	1.182849e-49	1.869737e-47
MsaG002291	MsaG011336	0.819772	1.705537e-52	3.728298e-50
MsaG002291	MsaG011341	0.817302	6.156797e-52	1.262199e-49
MsaG002291	MsaG011459	0.842803	3.851619e-58	1.643466e-55
MsaG002291	MsaG011942	0.800069	2.862124e-48	3.875886e-46
MsaG002291	MsaG011983	0.803112	6.851970e-49	9.943518e-47
MsaG002291	MsaG012130	0.820061	1.465520e-52	3.228557e-50
MsaG002291	MsaG012291	0.809148	3.724383e-50	6.230849e-48
MsaG002291	MsaG012297	0.812662	6.515489e-51	1.187765e-48
MsaG002291	MsaG012302	0.805165	2.574244e-49	3.917737e-47
MsaG002291	MsaG012594	0.821029	8.810317e-53	1.991270e-50
MsaG002291	MsaG012576	0.806590	1.295301e-49	2.038490e-47
MsaG002291	MsaG012692	0.805010	2.772416e-49	4.204165e-47
MsaG002291	MsaG013182	0.841548	8.250385e-58	3.381851e-55
MsaG002291	MsaG013327	0.837985	6.908711e-57	2.532649e-54
MsaG002291	MsaG013417	0.838205	6.068478e-57	2.239863e-54
MsaG002291	MsaG013883	0.814032	3.269153e-51	6.167368e-49
MsaG002291	MsaG013901	0.804842	3.004780e-49	4.538824e-47
MsaG002291	MsaG014029	0.804838	3.011012e-49	4.547774e-47
MsaG002291	MsaG014508	0.809300	3.456822e-50	5.804010e-48
MsaG002291	MsaG015317	0.803047	7.066275e-49	1.023893e-46
MsaG002291	MsaG015441	0.800022	2.926191e-48	3.958453e-46
MsaG002291	MsaG015447	0.831893	2.328982e-55	7.119206e-53
MsaG002291	MsaG015757	0.826995	3.561698e-54	9.469025e-52
MsaG002291	MsaG016366	0.801562	1.423832e-48	1.994211e-46
MsaG002291	MsaG016429	0.809573	3.022704e-50	5.109142e-48
MsaG002291	MsaG016796	0.802832	7.823415e-49	1.127977e-46
MsaG002291	MsaG017203	0.803344	6.138146e-49	8.955303e-47
MsaG002291	MsaG017226	0.803662	5.275481e-49	7.753669e-47
MsaG002291	MsaG017281	0.805289	2.425659e-49	3.702089e-47
MsaG002291	MsaG017348	0.832051	2.130138e-55	6.541437e-53
MsaG002291	MsaG017459	0.804244	3.998885e-49	5.957286e-47
MsaG002291	MsaG017713	0.800102	2.818937e-48	3.820116e-46
MsaG002291	MsaG017731	0.801755	1.300371e-48	1.829344e-46
MsaG002291	MsaG017771	0.800683	2.149477e-48	2.951492e-46
MsaG002291	MsaG017895	0.806104	1.638416e-49	2.548901e-47
MsaG002291	MsaG018355	0.868074	1.727411e-65	1.848271e-62
MsaG002291	MsaG018624	0.807626	7.836262e-50	1.263815e-47
MsaG002291	MsaG018683	0.806136	1.613308e-49	2.511726e-47
MsaG002291	MsaG018930	0.808863	4.283162e-50	7.116767e-48
MsaG002291	MsaG019734	0.802512	9.098687e-49	1.302333e-46
MsaG002291	MsaG019923	0.801963	1.179106e-48	1.666613e-46
MsaG002291	MsaG020091	0.822207	4.720699e-53	1.100835e-50
MsaG002291	MsaG020221	0.809224	3.588851e-50	6.014719e-48
MsaG002291	MsaG020345	0.812716	6.340478e-51	1.157433e-48
MsaG002291	MsaG020641	0.800427	2.422622e-48	3.307312e-46
MsaG002291	MsaG020642	0.805568	2.120597e-49	3.257617e-47
MsaG002291	MsaG020648	0.817094	6.851855e-52	1.397195e-49
MsaG002291	MsaG020650	0.829491	8.966363e-55	2.557472e-52
MsaG002291	MsaG020782	0.822080	5.050478e-53	1.173703e-50
MsaG002291	MsaG021085	0.811869	9.688305e-51	1.731873e-48
MsaG002291	MsaG021293	0.801681	1.345976e-48	1.890351e-46
MsaG002291	MsaG021403	0.826067	5.913405e-54	1.532137e-51
MsaG002291	MsaG021410	0.807675	7.653692e-50	1.235825e-47
MsaG002291	MsaG021483	0.825255	9.189848e-54	2.327934e-51
MsaG002291	MsaG021484	0.849339	6.542861e-60	3.467161e-57
MsaG002291	MsaG021563	0.811978	9.173521e-51	1.644247e-48
MsaG002291	MsaG021781	0.812824	6.006267e-51	1.099374e-48
MsaG002291	MsaG021783	0.820508	1.159275e-52	2.584137e-50
MsaG002291	MsaG021836	0.829229	1.037460e-54	2.936602e-52
MsaG002291	MsaG022048	0.827847	2.229397e-54	6.070569e-52
MsaG002291	MsaG022074	0.819604	1.861899e-52	4.052128e-50
MsaG002291	MsaG022454	0.840702	1.372857e-57	5.478748e-55
MsaG002291	MsaG022571	0.807109	1.007639e-49	1.605193e-47
MsaG002291	MsaG022609	0.825599	7.626647e-54	1.950334e-51
MsaG002291	MsaG022673	0.822936	3.200000e-53	7.610557e-51
MsaG002291	MsaG022706	0.804068	4.348994e-49	6.452679e-47
MsaG002291	MsaG022759	0.812207	8.181802e-51	1.474747e-48
MsaG002291	MsaG022954	0.802894	7.596090e-49	1.096793e-46
MsaG002291	MsaG022981	0.813704	3.857579e-51	7.218012e-49
MsaG002291	MsaG023246	0.813982	3.352465e-51	6.316822e-49
MsaG002291	MsaG023230	0.803326	6.188872e-49	9.025677e-47
MsaG002291	MsaG023333	0.806893	1.118582e-49	1.772896e-47
MsaG002291	MsaG023537	0.802882	7.638966e-49	1.102690e-46
MsaG002291	MsaG023664	0.802001	1.157989e-48	1.638173e-46
MsaG002291	MsaG023645	0.807028	1.047895e-49	1.666149e-47
MsaG002291	MsaG023728	0.806934	1.096886e-49	1.740129e-47
MsaG002291	MsaG023849	0.814612	2.436315e-51	4.663652e-49
MsaG002291	MsaG024116	0.823890	1.920476e-53	4.686845e-51
MsaG002291	MsaG024535	0.815571	1.496011e-51	2.933970e-49
MsaG002291	MsaG025367	0.828526	1.532649e-54	4.253711e-52
MsaG002291	MsaG025658	0.807722	7.478993e-50	1.209018e-47
MsaG002291	MsaG025750	0.814514	2.560983e-51	4.890253e-49
MsaG002291	MsaG025776	0.804924	2.888395e-49	4.371298e-47
MsaG002291	MsaG026252	0.839906	2.211557e-57	8.608391e-55
MsaG002291	MsaG026614	0.801839	1.249800e-48	1.761580e-46
MsaG002291	MsaG026674	0.800913	1.930199e-48	2.664010e-46
MsaG002291	MsaG026689	0.803495	5.712027e-49	8.362765e-47
MsaG002291	MsaG027306	0.800412	2.439568e-48	3.329332e-46
MsaG002291	MsaG027573	0.829312	9.905375e-55	2.810678e-52
MsaG002291	MsaG028194	0.812414	7.377997e-51	1.336744e-48
MsaG002291	MsaG028303	0.803992	4.510248e-49	6.679785e-47
MsaG002291	MsaG028308	0.809249	3.544072e-50	5.943379e-48
MsaG002291	MsaG028323	0.826422	4.872607e-54	1.274972e-51
MsaG002291	MsaG028417	0.801752	1.301839e-48	1.831305e-46
MsaG002291	MsaG028742	0.808896	4.214339e-50	7.007926e-48
MsaG002291	MsaG028807	0.811477	1.177751e-50	2.085188e-48
MsaG002291	MsaG028970	0.832483	1.666585e-55	5.182130e-53
MsaG002291	MsaG029210	0.817057	6.982572e-52	1.422500e-49
MsaG002291	MsaG029311	0.803676	5.240224e-49	7.704405e-47
MsaG002291	MsaG029466	0.802827	7.841973e-49	1.130519e-46
MsaG002291	MsaG029894	0.833102	1.172004e-55	3.711054e-53
MsaG002291	MsaG030265	0.806262	1.518078e-49	2.370632e-47
MsaG002291	MsaG030578	0.812336	7.669411e-51	1.386863e-48
MsaG002291	MsaG030612	0.802529	9.028796e-49	1.292823e-46
MsaG002291	MsaG031132	0.811607	1.103665e-50	1.960258e-48
MsaG002291	MsaG031414	0.808470	5.193382e-50	8.547663e-48
MsaG002291	MsaG031693	0.842769	3.932335e-58	1.676127e-55
MsaG002291	MsaG031694	0.801435	1.511372e-48	2.110799e-46
MsaG002291	MsaG032196	0.829457	9.140913e-55	2.604577e-52
MsaG002291	MsaG032177	0.807740	7.413732e-50	1.198981e-47
MsaG002291	MsaG032726	0.811343	1.259041e-50	2.221793e-48
MsaG002291	MsaG032728	0.803777	4.995857e-49	7.362184e-47
MsaG002291	MsaG033732	0.839662	2.557285e-57	9.877439e-55
MsaG002291	MsaG034005	0.835391	3.145800e-56	1.066106e-53
MsaG002291	MsaG034180	0.829581	8.531639e-55	2.439708e-52
MsaG002291	MsaG034225	0.813134	5.139097e-51	9.479662e-49
MsaG002291	MsaG034651	0.806955	1.085570e-49	1.723084e-47
MsaG002291	MsaG034661	0.801550	1.431984e-48	2.005113e-46
MsaG002291	MsaG035181	0.822455	4.136169e-53	9.709800e-51
MsaG002291	MsaG035390	0.804849	2.994624e-49	4.524197e-47
MsaG002291	MsaG035496	0.825322	8.864248e-54	2.249675e-51
MsaG002291	MsaG035683	0.801185	1.698954e-48	2.359354e-46
MsaG002291	MsaG036122	0.801090	1.776836e-48	2.462171e-46
MsaG002291	MsaG036503	0.812045	8.873107e-51	1.592984e-48
MsaG002291	MsaG037276	0.851049	2.181312e-60	1.225818e-57
MsaG002291	MsaG037297	0.821519	6.799695e-53	1.556809e-50
MsaG002291	MsaG037333	0.812487	7.111649e-51	1.290857e-48
MsaG002291	MsaG037747	0.813261	4.821213e-51	8.921490e-49
MsaG002291	MsaG038166	0.800321	2.545368e-48	3.466474e-46
MsaG002291	MsaG038168	0.805188	2.545696e-49	3.876394e-47
MsaG002291	MsaG038059	0.824286	1.551652e-53	3.827896e-51
MsaG002291	MsaG038452	0.839133	3.504100e-57	1.331262e-54
MsaG002291	MsaG038674	0.811754	1.025718e-50	1.828389e-48
MsaG002291	MsaG038991	0.842049	6.092872e-58	2.537752e-55
MsaG002291	MsaG039098	0.823494	2.374451e-53	5.733037e-51
MsaG002291	MsaG039117	0.802257	1.026263e-48	1.460336e-46
MsaG002291	MsaG039141	0.809806	2.694178e-50	4.579550e-48
MsaG002291	MsaG039488	0.834053	6.802259e-56	2.214800e-53
MsaG002291	MsaG039547	0.823463	2.414014e-53	5.823554e-51
MsaG002291	MsaG039649	0.817916	4.482236e-52	9.335203e-50
MsaG002291	MsaG039811	0.819700	1.771372e-52	3.864847e-50
MsaG002291	MsaG040019	0.804039	4.409674e-49	6.538312e-47
MsaG002291	MsaG040162	0.820248	1.328523e-52	2.941392e-50
MsaG002291	MsaG040261	0.806655	1.255240e-49	1.978410e-47
MsaG002291	MsaG040266	0.808205	5.909037e-50	9.663839e-48
MsaG002291	MsaG040336	0.826051	5.963421e-54	1.544439e-51
MsaG002291	MsaG040545	0.820388	1.234847e-52	2.743923e-50
MsaG002291	MsaG041010	0.818144	3.982807e-52	8.344085e-50
MsaG002291	MsaG041066	0.836050	2.145227e-56	7.415418e-54
MsaG002291	MsaG041303	0.800805	2.030211e-48	2.795364e-46
MsaG002291	MsaG041370	0.814026	3.278844e-51	6.184813e-49
MsaG002291	MsaG041730	0.818884	2.711045e-52	5.789863e-50
MsaG002291	MsaG041940	0.819232	2.262087e-52	4.875451e-50
MsaG002291	MsaG042064	0.815734	1.376528e-51	2.710859e-49
MsaG002291	MsaG042799	0.827495	2.706871e-54	7.297961e-52
MsaG002291	MsaG042749	0.815560	1.504131e-51	2.949099e-49
MsaG002291	MsaG043499	0.830386	5.440630e-55	1.592070e-52
MsaG002291	MsaG043850	0.802941	7.427422e-49	1.073615e-46
MsaG002291	MsaG043935	0.809641	2.922504e-50	4.947777e-48
MsaG002291	MsaG043880	0.800324	2.542219e-48	3.462390e-46
MsaG002291	MsaG043975	0.818214	3.839997e-52	8.059545e-50
MsaG002291	MsaG044313	0.808266	5.737698e-50	9.397332e-48
MsaG002291	MsaG044886	0.815689	1.408544e-51	2.770785e-49
MsaG002291	MsaG044946	0.814149	3.081366e-51	5.830208e-49
MsaG002291	MsaG045121	0.833328	1.029947e-55	3.282756e-53
MsaG002291	MsaG045122	0.809193	3.643610e-50	6.102027e-48
MsaG002291	MsaG045303	0.810393	2.017131e-50	3.477920e-48
MsaG002291	MsaG045294	0.824826	1.159629e-53	2.903178e-51
MsaG002291	MsaG045295	0.818097	4.081193e-52	8.539701e-50
MsaG002291	MsaG045314	0.861461	1.991924e-63	1.637386e-60
MsaG002291	MsaG045425	0.803711	5.153869e-49	7.583669e-47
MsaG002291	MsaG045517	0.805641	2.047762e-49	3.151202e-47
MsaG002291	MsaG045708	0.830561	4.930398e-55	1.449930e-52
MsaG002291	MsaG045958	0.818394	3.498370e-52	7.376547e-50
MsaG002291	MsaG046002	0.801573	1.416408e-48	1.984349e-46
MsaG002291	MsaG046281	0.808560	4.967667e-50	8.194007e-48
MsaG002291	MsaG046289	0.800835	2.002285e-48	2.758706e-46
MsaG002291	MsaG046558	0.828502	1.552644e-54	4.306333e-52
MsaG002291	MsaG046598	0.818213	3.843555e-52	8.066598e-50
MsaG002291	MsaG046920	0.808003	6.521642e-50	1.061409e-47
MsaG002291	MsaG004542	0.803279	6.327802e-49	9.218454e-47
MsaG002291	MsaG000632	0.815941	1.238255e-51	2.451449e-49
MsaG002291	MsaG003231	0.826164	5.608861e-54	1.457148e-51
MsaG002291	MsaG000658	0.824831	1.156341e-53	2.895369e-51
MsaG002291	MsaG007532	0.807084	1.019787e-49	1.623608e-47
MsaG002291	MsaG009147	0.801279	1.625684e-48	2.262392e-46
MsaG002291	MsaG008721	0.809415	3.266034e-50	5.499354e-48
MsaG002291	MsaG008263	0.815831	1.309847e-51	2.585902e-49
MsaG002291	MsaG008728	0.807979	6.599653e-50	1.073468e-47
MsaG002291	MsaG013105	0.820154	1.395817e-52	3.082576e-50
MsaG002291	MsaG013316	0.802274	1.018340e-48	1.449634e-46
MsaG002291	MsaG011916	0.841855	6.851768e-58	2.836256e-55
MsaG002291	MsaG023430	0.802267	1.021562e-48	1.453993e-46
MsaG002291	MsaG018949	0.812399	7.433370e-51	1.346295e-48
MsaG002291	MsaG018328	0.817740	4.910277e-52	1.018010e-49
MsaG002291	MsaG019768	0.818511	3.292065e-52	6.962629e-50
MsaG002291	MsaG021117	0.805320	2.388867e-49	3.648731e-47
MsaG002291	MsaG020224	0.860735	3.305311e-63	2.643319e-60
MsaG002291	MsaG018951	0.827171	3.233269e-54	8.638465e-52
MsaG002291	MsaG020214	0.831044	3.759861e-55	1.121165e-52
MsaG002291	MsaG024064	0.818794	2.841278e-52	6.053767e-50
MsaG002291	MsaG034563	0.809170	3.684529e-50	6.167335e-48
MsaG002291	MsaG032466	0.813133	5.141849e-51	9.484478e-49
MsaG002291	MsaG032292	0.800155	2.750194e-48	3.731411e-46
MsaG002291	MsaG033413	0.802248	1.030634e-48	1.466249e-46
MsaG002291	MsaG030783	0.801099	1.768869e-48	2.451665e-46
MsaG002291	MsaG032996	0.829948	6.948729e-55	2.008099e-52
MsaG002291	MsaG036648	0.804212	4.060431e-49	6.044512e-47
MsaG002291	MsaG039944	0.820404	1.224069e-52	2.721172e-50
MsaG002291	MsaG037462	0.827649	2.487008e-54	6.734389e-52
MsaG002291	MsaG036115	0.810775	1.668668e-50	2.904039e-48
MsaG002291	MsaG041441	0.803877	4.763266e-49	7.035643e-47
MsaG002291	MsaG047199	0.811159	1.379140e-50	2.422804e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG002291	MtrunA17_Chr1g0172861	85.246	244	34	1	1	242	32	275	5.53e-140	394
MsaG002291	MtrunA17_Chr1g0172961	43.802	242	89	10	1	213	32	255	4.21e-37	131
MsaG002291	MtrunA17_Chr1g0169561	36.242	298	115	12	1	246	40	314	2.20e-34	125
MsaG002291	MtrunA17_Chr1g0169521	35.906	298	116	13	1	246	40	314	1.70e-31	117
MsaG002291	MtrunA17_Chr4g0037041	55.556	117	29	4	1	103	32	139	7.80e-31	113
MsaG002291	MtrunA17_Chr7g0214511	37.069	232	104	12	37	246	74	285	3.84e-19	84.3
MsaG002291	MtrunA17_Chr1g0174871	32.130	277	132	12	1	246	32	283	5.40e-16	75.5
MsaG002291	MtrunA17_Chr2g0331601	40.385	104	41	4	2	84	138	241	3.77e-13	67.8
MsaG002291	MtrunA17_Chr1g0193731	30.870	230	121	10	33	242	54	265	1.03e-11	63.5
MsaG002291	MtrunA17_Chr1g0174861	29.940	167	88	6	9	153	27	186	8.98e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG002291	AT5G43170.1	42.308	78	39	1	2	79	75	146	1.24e-11	62.4
MsaG002291	AT2G37430.1	33.058	121	73	4	2	122	47	159	1.78e-11	61.6
MsaG002291	AT3G49930.1	43.038	79	37	2	2	73	94	171	3.70e-11	61.2
MsaG002291	AT5G67450.1	39.560	91	35	3	2	73	97	186	7.28e-11	60.8

Find 43 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTCCTCTTGCTACCTTTAT+TGG	0.171270	1:-36804274	None:intergenic
ACACAATCATGCTGTTAATA+AGG	0.281805	1:+36804074	MsaT002291.1:CDS
GAAACTTTCCTGCGGTGATA+TGG	0.327630	1:+36804365	MsaT002291.1:CDS
TTATTGGTCTGATGAGATAT+TGG	0.370387	1:-36804258	None:intergenic
ATATCTCATCAGACCAATAA+AGG	0.385178	1:+36804261	MsaT002291.1:CDS
TGCTAACTGCGAGTCATGTT+AGG	0.385892	1:+36804418	MsaT002291.1:CDS
TGATAAAGACGATGAGAAAC+AGG	0.415507	1:+36804098	MsaT002291.1:CDS
CTTCTCTTCAATGTCAATAG+AGG	0.428268	1:-36804571	None:intergenic
GTGGCCACCGAGTGCGGCTC+CGG	0.454483	1:-36804010	None:intergenic
GGTATTATTATCCTTTACCT+TGG	0.495202	1:-36804550	None:intergenic
ATAATCATGGTGAGAGGAAG+AGG	0.500570	1:+36804340	MsaT002291.1:CDS
GAGAAGAAGATCAATAATGA+AGG	0.510676	1:+36804588	MsaT002291.1:CDS
ATATCTCATGATAATAATCA+TGG	0.526348	1:+36804327	MsaT002291.1:CDS
GCTAACTGCGAGTCATGTTA+GGG	0.531070	1:+36804419	MsaT002291.1:CDS
TTATCATGAGATATGAGTGT+TGG	0.532087	1:-36804318	None:intergenic
TTCAACTCCGGAGCCGCACT+CGG	0.534161	1:+36804003	MsaT002291.1:CDS
ATCACGAGAGACCAAGGTAA+AGG	0.539661	1:+36804539	MsaT002291.1:CDS
AAGTCAATTGACGATGAAGT+TGG	0.540982	1:-36804219	None:intergenic
GTGTCCACACAAAGCCTGCT+TGG	0.550186	1:-36804157	None:intergenic
CTCATTAACCATATCACCGC+AGG	0.561714	1:-36804373	None:intergenic
TAGGGTTAATGATGAAATAG+TGG	0.562125	1:+36804437	MsaT002291.1:CDS
TCATCCAAGCAGGCTTTGTG+TGG	0.579070	1:+36804153	MsaT002291.1:CDS
AGTGTGAGTTGTGCGGCAAA+AGG	0.579769	1:+36803980	MsaT002291.1:CDS
TCAATTGACGATGAAGTTGG+AGG	0.580649	1:-36804216	None:intergenic
CGGTGATATGGTTAATGAGA+CGG	0.580945	1:+36804377	MsaT002291.1:CDS
AACTCCGGAGCCGCACTCGG+TGG	0.593152	1:+36804006	MsaT002291.1:CDS
ATGAGATGTCACAAAAGAGA+CGG	0.593560	1:+36804180	MsaT002291.1:CDS
TGAGATGTCACAAAAGAGAC+GGG	0.601680	1:+36804181	MsaT002291.1:CDS
TGATTTGAATGAGCGTCCGA+TGG	0.602910	1:+36804671	MsaT002291.1:CDS
TCATCTGCAACATCTTCCAT+CGG	0.606110	1:-36804687	None:intergenic
TAATGAAGGTGAAACTGAGA+GGG	0.616761	1:+36804602	MsaT002291.1:CDS
CAATTGACGATGAAGTTGGA+GGG	0.619880	1:-36804215	None:intergenic
TGCGGCAAAAGGTTCAACTC+CGG	0.624297	1:+36803991	MsaT002291.1:CDS
AGACCAATAAAGGTAGCAAG+AGG	0.628089	1:+36804271	MsaT002291.1:CDS
TATGGTTAATGAGACGGTCA+AGG	0.630287	1:+36804383	MsaT002291.1:CDS
ATGATAATAATCATGGTGAG+AGG	0.635487	1:+36804334	MsaT002291.1:CDS
TGATCAATCACGAGAGACCA+AGG	0.650584	1:+36804533	MsaT002291.1:CDS
TTGTTGTGATGTTTGCAACA+AGG	0.651265	1:+36804125	MsaT002291.1:CDS
ATAATGAAGGTGAAACTGAG+AGG	0.653304	1:+36804601	MsaT002291.1:CDS
ATCATGGTGAGAGGAAGAGG+CGG	0.703073	1:+36804343	MsaT002291.1:CDS
ATGTATGAGTGTGAGTTGTG+CGG	0.703631	1:+36803973	MsaT002291.1:CDS
AAGAGGCGGAAACTTTCCTG+CGG	0.719801	1:+36804357	MsaT002291.1:CDS
ATCAAAGTGAAAGATGACAG+CGG	0.730896	1:+36804462	MsaT002291.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	36803973	36804713	36803973	ID=MsaG002291
Chr1	mRNA	36803973	36804713	36803973	ID=MsaT002291.1;Parent=MsaG002291
Chr1	exon	36803973	36804713	36803973	ID=MsaT002291.1.exon1;Parent=MsaT002291.1
Chr1	CDS	36803973	36804713	36803973	ID=cds.MsaT002291.1;Parent=MsaT002291.1

Gene Sequence

>MsaT002291.1

ATGTATGAGTGTGAGTTGTGCGGCAAAAGGTTCAACTCCGGAGCCGCACTCGGTGGCCACAAAACATCTCACCGCTCACAACCTCAAAACAAGAAACAAAGACACAATCATGCTGTTAATAAGGATGATAAAGACGATGAGAAACAGGAACATTGTTGTGATGTTTGCAACAAGGTTTTTTCATCCAAGCAGGCTTTGTGTGGACACATGAGATGTCACAAAAGAGACGGGAAGAGTATTCACCCTCCAACTTCATCGTCAATTGACTTATCAAAATATATGCTACCAATATCTCATCAGACCAATAAAGGTAGCAAGAGGAATATCTTTGATGACGATGTTGCTCCAACACTCATATCTCATGATAATAATCATGGTGAGAGGAAGAGGCGGAAACTTTCCTGCGGTGATATGGTTAATGAGACGGTCAAGGAACAAACTGTGATGCTAACTGCGAGTCATGTTAGGGTTAATGATGAAATAGTGGTGATCAAAGTGAAAGATGACAGCGGAAATAAAAGACTCAAACTTTCAAGCAATTCTGAAGATATTGTTGACATTGATCAATCACGAGAGACCAAGGTAAAGGATAATAATACCTCTATTGACATTGAAGAGAAGAAGATCAATAATGAAGGTGAAACTGAGAGGGAACAAAGTCATAATGAATTGAAGTCAAATAGAGTTGTTATGAATTTTGATTTGAATGAGCGTCCGATGGAAGATGTTGCAGATGAGTGA

Protein sequence

>MsaT002291.1

MYECELCGKRFNSGAALGGHKTSHRSQPQNKKQRHNHAVNKDDKDDEKQEHCCDVCNKVFSSKQALCGHMRCHKRDGKSIHPPTSSSIDLSKYMLPISHQTNKGSKRNIFDDDVAPTLISHDNNHGERKRRKLSCGDMVNETVKEQTVMLTASHVRVNDEIVVIKVKDDSGNKRLKLSSNSEDIVDIDQSRETKVKDNNTSIDIEEKKINNEGETEREQSHNELKSNRVVMNFDLNERPMEDVADE*