AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG002507

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG002507 MtrunA17_Chr1g0175611 96.774 124 4 0 1 124 1 124 3.56e-86 248
MsaG002507 MtrunA17_Chr1g0175601 84.677 124 19 0 1 124 1 124 7.65e-74 217
MsaG002507 MtrunA17_Chr1g0180591 79.032 124 26 0 1 124 1 124 1.23e-69 206
MsaG002507 MtrunA17_Chr1g0169761 77.419 124 28 0 1 124 1 124 1.79e-67 201
MsaG002507 MtrunA17_Chr8g0376821 76.613 124 29 0 1 124 1 124 2.90e-64 193
MsaG002507 MtrunA17_Chr4g0074101 68.571 140 27 1 1 123 1 140 9.32e-64 192
MsaG002507 MtrunA17_Chr8g0357771 62.097 124 47 0 1 124 1 124 3.10e-50 157
MsaG002507 MtrunA17_Chr8g0356071 52.500 120 54 1 1 120 1 117 2.52e-38 127
MsaG002507 MtrunA17_Chr3g0119901 44.628 121 65 1 1 119 8 128 4.37e-30 107
MsaG002507 MtrunA17_Chr3g0085241 42.149 121 68 1 1 119 40 160 8.31e-28 102
MsaG002507 MtrunA17_Chr3g0099411 46.018 113 59 1 2 112 9 121 1.70e-27 100
MsaG002507 MtrunA17_Chr1g0206991 43.548 124 60 2 2 119 9 128 2.15e-27 99.8
MsaG002507 MtrunA17_Chr1g0206721 46.018 113 59 1 2 112 9 121 2.46e-27 100
MsaG002507 MtrunA17_Chr1g0206701 45.133 113 60 1 2 112 9 121 1.53e-26 99.0
MsaG002507 MtrunA17_Chr3g0099421 44.248 113 61 2 2 112 34 146 2.91e-26 98.6
MsaG002507 MtrunA17_Chr5g0419601 52.500 80 38 0 1 80 8 87 3.87e-26 97.8
MsaG002507 MtrunA17_Chr1g0149391 44.144 111 59 2 2 110 9 118 4.45e-26 97.8
MsaG002507 MtrunA17_Chr4g0052061 45.872 109 59 0 1 109 1 109 1.01e-25 94.7
MsaG002507 MtrunA17_Chr1g0188671 42.982 114 62 2 2 113 47 159 1.28e-25 97.4
MsaG002507 MtrunA17_Chr1g0208561 44.554 101 54 1 2 100 9 109 1.32e-25 96.3
MsaG002507 MtrunA17_Chr3g0089141 44.554 101 54 1 2 100 9 109 2.87e-25 95.5
MsaG002507 MtrunA17_Chr2g0292791 43.363 113 62 1 2 112 9 121 3.84e-25 95.1
MsaG002507 MtrunA17_Chr8g0355091 43.363 113 62 1 2 112 9 121 6.08e-25 94.7
MsaG002507 MtrunA17_Chr2g0300421 44.554 101 54 1 2 100 9 109 8.99e-25 92.8
MsaG002507 MtrunA17_Chr2g0325971 44.554 101 54 1 2 100 9 109 1.44e-24 93.6
MsaG002507 MtrunA17_Chr4g0052081 47.525 101 48 2 1 97 1 100 3.84e-24 91.3
MsaG002507 MtrunA17_Chr1g0208581 42.574 101 56 1 2 100 9 109 5.70e-24 92.0
MsaG002507 MtrunA17_Chr2g0333981 39.496 119 70 1 1 119 11 127 6.08e-24 90.5
MsaG002507 MtrunA17_Chr1g0187361 51.899 79 38 0 2 80 9 87 1.44e-23 91.3
MsaG002507 MtrunA17_Chr3g0089151 39.024 123 73 1 2 122 9 131 2.39e-23 87.8
MsaG002507 MtrunA17_Chr2g0317451 49.367 79 40 0 2 80 9 87 3.02e-23 90.1
MsaG002507 MtrunA17_Chr2g0317481 49.367 79 40 0 2 80 9 87 3.09e-23 90.1
MsaG002507 MtrunA17_Chr2g0300441 43.636 110 60 1 2 109 9 118 3.48e-23 90.1
MsaG002507 MtrunA17_Chr5g0422421 55.072 69 31 0 2 70 9 77 8.38e-23 89.0
MsaG002507 MtrunA17_Chr8g0379021 46.512 86 44 1 2 85 12 97 1.29e-21 84.7
MsaG002507 MtrunA17_Chr5g0422941 46.835 79 42 0 2 80 9 87 1.60e-21 85.9
MsaG002507 MtrunA17_Chr4g0020221 52.174 69 33 0 1 69 1 69 1.09e-20 84.0
MsaG002507 MtrunA17_Chr1g0206691 45.361 97 51 1 18 112 8 104 1.26e-20 83.2
MsaG002507 MtrunA17_Chr2g0279821 41.818 110 63 1 1 110 1 109 8.68e-20 81.3
MsaG002507 MtrunA17_Chr4g0018951 56.140 57 25 0 14 70 24 80 1.09e-19 79.3
MsaG002507 MtrunA17_Chr7g0238991 44.444 99 53 1 13 109 32 130 1.43e-19 80.9
MsaG002507 MtrunA17_Chr5g0427401 49.275 69 35 0 1 69 1 69 4.67e-19 79.0
MsaG002507 MtrunA17_Chr5g0427921 56.667 60 26 0 1 60 1 60 4.91e-19 74.7
MsaG002507 MtrunA17_Chr1g0187351 57.377 61 25 1 18 77 8 68 5.91e-19 75.1
MsaG002507 MtrunA17_Chr8g0351041 41.667 96 54 1 1 96 1 94 6.46e-19 77.4
MsaG002507 MtrunA17_Chr3g0097101 52.113 71 34 0 1 71 16 86 9.10e-19 78.6
MsaG002507 MtrunA17_Chr4g0049541 50.000 72 36 0 1 72 1 72 1.24e-18 77.8
MsaG002507 MtrunA17_Chr7g0246431 37.963 108 58 2 1 105 1 102 1.93e-18 77.0
MsaG002507 MtrunA17_Chr1g0173161 50.769 65 32 0 1 65 1 65 2.51e-18 73.6
MsaG002507 MtrunA17_Chr2g0284911 50.704 71 35 0 1 71 16 86 3.16e-18 77.4
MsaG002507 MtrunA17_Chr8g0351031 41.667 96 54 1 1 96 1 94 3.40e-18 76.6
MsaG002507 MtrunA17_Chr3g0077501 49.296 71 36 0 1 71 1 71 3.80e-18 76.6
MsaG002507 MtrunA17_Chr8g0351051 49.275 69 35 0 1 69 1 69 3.85e-18 77.0
MsaG002507 MtrunA17_Chr8g0380021 39.423 104 60 1 1 104 17 117 8.92e-18 75.9
MsaG002507 MtrunA17_Chr3g0111841 45.070 71 38 1 8 77 2 72 1.24e-17 71.6
MsaG002507 MtrunA17_Chr4g0071601 52.113 71 34 0 1 71 11 81 1.55e-17 74.3
MsaG002507 MtrunA17_Chr5g0411691 49.275 69 35 0 1 69 1 69 1.76e-17 75.1
MsaG002507 MtrunA17_Chr6g0474371 38.384 99 57 2 1 95 1 99 2.62e-17 73.9
MsaG002507 MtrunA17_Chr4g0057151 47.826 69 36 0 1 69 1 69 3.09e-17 73.9
MsaG002507 MtrunA17_Chr1g0204111 47.826 69 36 0 1 69 17 85 4.90e-17 74.3
MsaG002507 MtrunA17_Chr4g0061671 34.848 132 69 5 1 116 1 131 5.72e-17 72.8
MsaG002507 MtrunA17_Chr4g0049901 45.588 68 37 0 1 68 27 94 1.31e-16 72.8
MsaG002507 MtrunA17_Chr1g0164791 43.038 79 43 1 1 77 1 79 1.60e-16 72.4
MsaG002507 MtrunA17_Chr5g0404951 50.000 62 31 0 1 62 1 62 1.75e-16 72.4
MsaG002507 MtrunA17_Chr4g0044071 57.692 52 22 0 1 52 1 52 2.18e-16 69.7
MsaG002507 MtrunA17_Chr3g0142191 50.000 62 31 0 1 62 1 62 2.28e-16 72.0
MsaG002507 MtrunA17_Chr5g0412461 38.384 99 52 3 1 99 1 90 2.33e-16 72.0
MsaG002507 MtrunA17_Chr4g0061691 42.857 70 39 1 1 69 1 70 2.38e-16 72.0
MsaG002507 MtrunA17_Chr5g0412271 43.478 69 39 0 1 69 1 69 2.71e-16 72.0
MsaG002507 MtrunA17_Chr5g0425191 58.824 51 21 0 1 51 1 51 2.86e-16 68.9
MsaG002507 MtrunA17_Chr2g0308251 41.096 73 42 1 1 72 1 73 3.63e-16 68.2
MsaG002507 MtrunA17_Chr5g0420081 50.877 57 28 0 1 57 1 57 3.66e-16 71.6
MsaG002507 MtrunA17_Chr5g0420091 52.632 57 27 0 1 57 1 57 5.20e-16 70.9
MsaG002507 MtrunA17_Chr1g0159661 37.975 79 47 1 1 77 1 79 5.74e-16 70.1
MsaG002507 MtrunA17_Chr7g0220121 33.333 96 63 1 1 95 1 96 6.35e-16 71.2
MsaG002507 MtrunA17_Chr8g0377561 52.632 57 27 0 1 57 1 57 7.37e-16 67.8
MsaG002507 MtrunA17_Chr8g0366231 36.264 91 57 1 1 90 1 91 8.54e-16 70.9
MsaG002507 MtrunA17_Chr7g0220111 52.632 57 27 0 1 57 1 57 9.19e-16 70.9
MsaG002507 MtrunA17_Chr5g0417661 51.852 54 26 0 1 54 56 109 1.12e-15 68.2
MsaG002507 MtrunA17_Chr7g0246381 45.588 68 32 1 1 63 1 68 1.39e-15 66.2
MsaG002507 MtrunA17_Chr3g0122251 54.386 57 26 0 1 57 1 57 1.89e-15 69.7
MsaG002507 MtrunA17_Chr3g0134451 43.836 73 40 1 1 72 1 73 1.91e-15 70.5
MsaG002507 MtrunA17_Chr3g0111931 49.206 63 32 0 18 80 6 68 1.97e-15 67.0
MsaG002507 MtrunA17_Chr3g0125241 41.538 65 38 0 1 65 26 90 3.31e-15 68.6
MsaG002507 MtrunA17_Chr6g0455511 52.632 57 27 0 1 57 1 57 3.32e-15 69.3
MsaG002507 MtrunA17_Chr4g0018421 45.205 73 39 1 1 72 1 73 3.56e-15 68.6
MsaG002507 MtrunA17_Chr1g0166611 68.182 44 14 0 15 58 19 62 1.77e-14 65.1
MsaG002507 MtrunA17_Chr4g0060841 38.961 77 45 1 1 75 1 77 3.14e-14 67.4
MsaG002507 MtrunA17_Chr8g0345001 44.118 68 38 0 3 70 19 86 5.68e-13 62.4
MsaG002507 MtrunA17_Chr3g0111831 50.000 52 26 0 18 69 20 71 8.24e-13 59.7
MsaG002507 MtrunA17_Chr3g0093131 49.057 53 26 1 19 70 36 88 8.78e-12 59.3
MsaG002507 MtrunA17_Chr6g0457851 40.000 60 36 0 1 60 11 70 3.81e-11 58.9
MsaG002507 MtrunA17_Chr2g0283941 37.838 74 44 1 1 72 1 74 6.43e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG002507 AT3G66656.1 72.464 69 19 0 1 69 1 69 5.12e-33 114
MsaG002507 AT2G34440.1 51.351 111 52 2 1 110 1 110 6.50e-32 111
MsaG002507 AT2G24840.1 41.322 121 71 0 1 121 62 182 9.62e-29 105
MsaG002507 AT5G60440.1 45.902 122 59 3 2 119 7 125 1.87e-26 100
MsaG002507 AT1G01530.1 42.735 117 64 1 1 117 6 119 3.94e-23 90.5
MsaG002507 AT1G65360.1 39.450 109 66 0 1 109 6 114 8.02e-22 86.7
MsaG002507 AT1G47760.1 43.269 104 51 2 1 96 1 104 8.16e-21 83.2
MsaG002507 AT4G22950.2 43.820 89 46 1 1 89 1 85 1.26e-20 82.4
MsaG002507 AT5G13790.1 52.174 69 33 0 1 69 1 69 1.44e-20 84.3
MsaG002507 AT5G13790.2 52.174 69 33 0 1 69 1 69 1.56e-20 84.3
MsaG002507 AT4G36590.1 41.525 118 57 3 2 110 7 121 1.71e-20 83.6
MsaG002507 AT3G61120.1 46.154 78 42 0 1 78 1 78 1.76e-20 83.6
MsaG002507 AT4G37940.4 41.818 110 63 1 1 110 1 109 2.49e-20 82.4
MsaG002507 AT4G37940.1 41.818 110 63 1 1 110 1 109 2.82e-20 82.8
MsaG002507 AT4G37940.3 41.818 110 63 1 1 110 1 109 3.00e-20 81.3
MsaG002507 AT3G57230.2 52.174 69 33 0 1 69 1 69 3.68e-20 80.5
MsaG002507 AT2G45660.2 36.111 108 66 1 1 108 1 105 1.13e-19 79.3
MsaG002507 AT4G22950.3 43.820 89 46 1 1 89 1 85 1.37e-19 80.9
MsaG002507 AT4G22950.1 43.820 89 46 1 1 89 1 85 1.37e-19 80.9
MsaG002507 AT3G57230.1 52.174 69 33 0 1 69 1 69 1.52e-19 80.9
MsaG002507 AT3G57230.4 52.174 69 33 0 1 69 1 69 1.52e-19 80.9
MsaG002507 AT3G57390.3 50.725 69 34 0 1 69 1 69 1.96e-19 80.5
MsaG002507 AT1G72350.1 51.282 78 36 1 2 79 43 118 2.22e-19 80.1
MsaG002507 AT3G57390.1 50.725 69 34 0 1 69 1 69 3.86e-19 80.1
MsaG002507 AT2G45660.1 36.111 108 66 1 1 108 1 105 4.38e-19 79.3
MsaG002507 AT2G22630.1 50.725 69 34 0 1 69 1 69 5.29e-19 79.3
MsaG002507 AT2G22630.2 50.725 69 34 0 1 69 1 69 5.29e-19 79.3
MsaG002507 AT4G09960.2 50.704 71 35 0 1 71 1 71 1.14e-18 78.2
MsaG002507 AT4G09960.6 50.704 71 35 0 1 71 2 72 1.20e-18 78.6
MsaG002507 AT4G09960.1 50.704 71 35 0 1 71 1 71 1.21e-18 78.6
MsaG002507 AT2G22540.3 41.414 99 49 3 1 99 1 90 1.53e-18 78.6
MsaG002507 AT2G22540.1 41.414 99 49 3 1 99 1 90 1.53e-18 78.6
MsaG002507 AT4G09960.5 50.704 71 35 0 1 71 11 81 1.67e-18 78.2
MsaG002507 AT2G45650.1 49.275 69 35 0 1 69 1 69 1.71e-18 78.6
MsaG002507 AT2G14210.1 43.529 85 47 1 1 84 1 85 2.22e-18 77.8
MsaG002507 AT4G09960.3 50.704 71 35 0 1 71 27 97 2.48e-18 78.2
MsaG002507 AT2G14210.2 43.529 85 47 1 1 84 1 85 2.93e-18 77.4
MsaG002507 AT4G09960.4 44.944 89 38 1 1 89 96 173 3.09e-18 79.0
MsaG002507 AT4G24540.1 38.947 95 57 1 1 95 1 94 5.84e-18 76.6
MsaG002507 AT1G29962.1 46.377 69 37 0 2 70 8 76 8.03e-18 75.5
MsaG002507 AT3G04100.1 47.692 65 34 0 2 66 14 78 9.35e-18 75.9
MsaG002507 AT5G20240.2 44.304 79 42 1 1 77 1 79 9.96e-18 74.3
MsaG002507 AT5G20240.1 44.304 79 42 1 1 77 1 79 2.08e-17 74.7
MsaG002507 AT1G28460.1 46.377 69 37 0 2 70 8 76 2.22e-17 74.3
MsaG002507 AT5G10140.2 54.386 57 26 0 1 57 1 57 3.09e-17 73.6
MsaG002507 AT5G65070.4 51.724 58 28 0 1 58 1 58 3.41e-17 72.8
MsaG002507 AT2G42830.2 49.296 71 36 0 1 71 16 86 3.63e-17 74.7
MsaG002507 AT2G42830.1 49.296 71 36 0 1 71 16 86 3.64e-17 74.7
MsaG002507 AT3G58780.1 49.296 71 36 0 1 71 16 86 4.19e-17 74.7
MsaG002507 AT3G54340.1 40.909 88 37 1 1 73 1 88 4.23e-17 74.3
MsaG002507 AT5G10140.4 54.386 57 26 0 1 57 1 57 4.53e-17 73.2
MsaG002507 AT3G58780.5 49.296 71 36 0 1 71 22 92 5.26e-17 74.7
MsaG002507 AT4G11880.2 55.172 58 26 0 1 58 1 58 5.39e-17 73.2
MsaG002507 AT4G11880.3 55.172 58 26 0 1 58 1 58 5.39e-17 73.2
MsaG002507 AT5G10140.3 53.448 58 27 0 1 58 1 58 5.44e-17 73.2
MsaG002507 AT5G10140.1 54.386 57 26 0 1 57 1 57 5.49e-17 73.6
MsaG002507 AT5G51860.2 46.575 73 39 0 1 73 1 73 5.62e-17 73.6
MsaG002507 AT1G77980.1 47.945 73 37 1 1 72 1 73 6.34e-17 75.1
MsaG002507 AT5G51860.1 46.575 73 39 0 1 73 1 73 6.37e-17 73.6
MsaG002507 AT5G65070.1 51.724 58 28 0 1 58 1 58 6.92e-17 73.2
MsaG002507 AT5G51870.2 46.377 69 37 0 1 69 1 69 7.33e-17 72.4
MsaG002507 AT5G51870.1 46.377 69 37 0 1 69 1 69 7.58e-17 73.2
MsaG002507 AT3G58780.4 49.296 71 36 0 1 71 16 86 9.39e-17 74.3
MsaG002507 AT5G51870.5 46.377 69 37 0 1 69 24 92 1.27e-16 72.4
MsaG002507 AT5G51870.4 46.377 69 37 0 1 69 1 69 1.37e-16 72.8
MsaG002507 AT5G65070.3 49.231 65 31 1 1 63 1 65 1.38e-16 73.2
MsaG002507 AT4G18960.1 50.000 70 35 0 2 71 18 87 1.39e-16 73.6
MsaG002507 AT1G22130.1 46.753 77 39 2 1 76 1 76 1.42e-16 74.3
MsaG002507 AT4G11880.4 55.172 58 26 0 1 58 1 58 1.52e-16 72.8
MsaG002507 AT4G11880.1 55.172 58 26 0 1 58 1 58 1.52e-16 72.8
MsaG002507 AT5G51870.3 46.377 69 37 0 1 69 11 79 1.73e-16 72.8
MsaG002507 AT3G30260.1 54.386 57 26 0 1 57 1 57 1.90e-16 72.8
MsaG002507 AT5G65070.2 51.724 58 28 0 1 58 1 58 2.05e-16 72.8
MsaG002507 AT1G71692.1 47.222 72 37 1 1 71 1 72 2.40e-16 72.0
MsaG002507 AT5G65070.5 51.724 58 28 0 1 58 1 58 2.57e-16 72.0
MsaG002507 AT3G58780.2 55.172 58 26 0 1 58 16 73 2.87e-16 72.4
MsaG002507 AT2G22540.2 52.632 57 27 0 1 57 1 57 3.26e-16 72.0
MsaG002507 AT1G46408.1 48.684 76 33 2 1 70 1 76 3.26e-16 72.4
MsaG002507 AT1G77950.3 45.205 73 39 1 1 72 1 73 3.36e-16 72.4
MsaG002507 AT1G77950.2 45.205 73 39 1 1 72 1 73 3.36e-16 72.4
MsaG002507 AT1G77950.1 45.205 73 39 1 1 72 1 73 3.36e-16 72.4
MsaG002507 AT1G77950.4 45.205 73 39 1 1 72 1 73 3.36e-16 72.4
MsaG002507 AT3G58780.3 55.172 58 26 0 1 58 16 73 3.71e-16 72.4
MsaG002507 AT1G17310.1 46.512 86 43 2 2 86 48 131 3.86e-16 71.6
MsaG002507 AT5G62165.17 42.254 71 41 0 1 71 1 71 4.49e-16 70.1
MsaG002507 AT5G62165.12 42.254 71 41 0 1 71 1 71 4.49e-16 70.1
MsaG002507 AT5G62165.11 42.254 71 41 0 1 71 1 71 4.49e-16 70.1
MsaG002507 AT1G17310.2 46.512 86 43 2 2 86 59 142 5.34e-16 71.6
MsaG002507 AT5G62165.6 42.254 71 41 0 1 71 1 71 6.89e-16 69.7
MsaG002507 AT5G62165.9 42.254 71 41 0 1 71 1 71 6.89e-16 69.7
MsaG002507 AT5G62165.7 42.254 71 41 0 1 71 1 71 6.89e-16 69.7
MsaG002507 AT5G62165.8 42.254 71 41 0 1 71 1 71 6.89e-16 69.7
MsaG002507 AT5G62165.13 42.254 71 41 0 1 71 1 71 6.89e-16 69.7
MsaG002507 AT5G62165.14 42.254 71 41 0 1 71 1 71 7.63e-16 68.2
MsaG002507 AT1G69540.1 44.737 76 41 1 1 75 1 76 1.16e-15 72.0
MsaG002507 AT1G69120.2 51.724 58 28 0 1 58 1 58 1.17e-15 70.5
MsaG002507 AT5G62165.10 42.254 71 41 0 1 71 1 71 1.20e-15 70.1
MsaG002507 AT5G62165.4 42.254 71 41 0 1 71 1 71 1.20e-15 70.1
MsaG002507 AT5G62165.3 42.254 71 41 0 1 71 1 71 1.23e-15 70.1
MsaG002507 AT5G62165.1 42.254 71 41 0 1 71 1 71 1.23e-15 70.1
MsaG002507 AT5G62165.2 42.254 71 41 0 1 71 1 71 1.23e-15 70.1
MsaG002507 AT2G03710.3 52.632 57 27 0 1 57 1 57 1.24e-15 69.7
MsaG002507 AT1G69540.2 44.737 76 41 1 1 75 1 76 1.45e-15 71.6
MsaG002507 AT5G60910.1 50.877 57 28 0 1 57 1 57 1.57e-15 70.5
MsaG002507 AT1G69120.1 51.724 58 28 0 1 58 1 58 2.29e-15 70.1
MsaG002507 AT5G15800.1 52.632 57 27 0 1 57 1 57 2.71e-15 70.1
MsaG002507 AT1G26310.1 50.000 58 29 0 1 58 1 58 2.87e-15 70.1
MsaG002507 AT5G15800.2 52.632 57 27 0 1 57 1 57 3.93e-15 69.7
MsaG002507 AT2G03710.2 52.632 57 27 0 1 57 1 57 4.12e-15 69.3
MsaG002507 AT2G03710.1 52.632 57 27 0 1 57 1 57 4.25e-15 69.3
MsaG002507 AT5G65060.3 52.727 55 26 0 1 55 1 55 4.31e-15 68.6
MsaG002507 AT1G24260.3 52.632 57 27 0 1 57 1 57 4.37e-15 69.3
MsaG002507 AT3G02310.2 52.632 57 27 0 1 57 1 57 4.76e-15 68.6
MsaG002507 AT1G24260.1 52.632 57 27 0 1 57 1 57 5.08e-15 69.3
MsaG002507 AT5G23260.3 61.224 49 19 0 1 49 1 49 5.12e-15 68.9
MsaG002507 AT1G24260.2 52.632 57 27 0 1 57 1 57 5.14e-15 69.3
MsaG002507 AT5G23260.2 61.224 49 19 0 1 49 1 49 5.70e-15 68.9
MsaG002507 AT3G02310.1 52.632 57 27 0 1 57 1 57 6.12e-15 68.9
MsaG002507 AT5G65060.2 52.727 55 26 0 1 55 1 55 6.30e-15 67.8
MsaG002507 AT5G65060.1 52.727 55 26 0 1 55 1 55 6.43e-15 68.2
MsaG002507 AT5G65050.2 50.909 55 27 0 1 55 1 55 6.86e-15 67.4
MsaG002507 AT5G23260.1 61.224 49 19 0 1 49 17 65 6.91e-15 68.9
MsaG002507 AT5G23260.4 61.224 49 19 0 1 49 17 65 7.20e-15 68.9
MsaG002507 AT5G65080.3 50.909 55 27 0 1 55 8 62 8.92e-15 67.4
MsaG002507 AT5G65080.2 50.909 55 27 0 1 55 8 62 1.18e-14 67.4
MsaG002507 AT1G18750.3 41.558 77 43 1 1 75 1 77 1.71e-14 68.9
MsaG002507 AT5G65050.5 50.909 55 27 0 1 55 1 55 1.74e-14 66.6
MsaG002507 AT5G65050.1 50.909 55 27 0 1 55 1 55 1.87e-14 66.6
MsaG002507 AT5G65050.3 50.909 55 27 0 1 55 1 55 1.98e-14 66.6
MsaG002507 AT1G18750.1 41.558 77 43 1 1 75 1 77 2.41e-14 68.2
MsaG002507 AT2G03060.3 42.857 77 42 2 1 75 1 77 3.28e-14 67.8
MsaG002507 AT2G03060.7 42.857 77 42 2 1 75 1 77 3.28e-14 67.8
MsaG002507 AT2G03060.1 42.857 77 42 2 1 75 1 77 3.28e-14 67.8
MsaG002507 AT2G03060.2 42.857 77 42 2 1 75 1 77 3.31e-14 67.8
MsaG002507 AT1G18750.4 41.558 77 43 1 1 75 1 77 3.64e-14 67.8
MsaG002507 AT4G37435.1 29.530 149 70 3 1 120 1 143 5.75e-14 65.5
MsaG002507 AT1G28450.1 40.580 69 41 0 2 70 8 76 1.25e-13 64.3
MsaG002507 AT5G49490.1 43.056 72 37 1 3 70 46 117 4.97e-13 64.3
MsaG002507 AT2G26320.1 43.860 57 32 0 1 57 17 73 5.61e-13 60.8
MsaG002507 AT1G60920.1 42.466 73 37 2 3 70 5 77 6.84e-13 62.4
MsaG002507 AT5G04640.1 44.444 72 36 2 3 70 5 76 2.55e-12 62.4
MsaG002507 AT5G38620.1 40.278 72 39 1 3 70 6 77 3.04e-12 62.4
MsaG002507 AT5G49420.1 40.278 72 39 1 3 70 8 79 3.43e-12 62.0
MsaG002507 AT1G77080.11 66.667 39 13 0 1 39 1 39 3.45e-12 60.5
MsaG002507 AT1G77080.5 66.667 39 13 0 1 39 1 39 4.23e-12 60.1
MsaG002507 AT1G77080.12 66.667 39 13 0 1 39 1 39 4.69e-12 59.7
MsaG002507 AT1G77080.4 66.667 39 13 0 1 39 1 39 7.38e-12 60.1
MsaG002507 AT1G77080.2 66.667 39 13 0 1 39 1 39 9.54e-12 59.7
MsaG002507 AT1G77080.8 66.667 39 13 0 1 39 1 39 1.43e-11 59.7
MsaG002507 AT1G65300.1 40.278 72 41 2 3 72 2 73 5.25e-11 58.5

Find 25 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTCTGATTCTCCGAATA+TGG 0.233220 1:-42472941 MsaT002507.1:CDS
GGGAACAATCCTTATTCTTT+TGG 0.240671 1:-42473039 MsaT002507.1:CDS
CCTGGGTGACCAAAAGAATA+AGG 0.337629 1:+42473030 None:intergenic
GCTATTGTTGTGTTCTCTCC+AGG 0.379882 1:-42473060 MsaT002507.1:CDS
AACTTCAGCTCCGCACAAAA+TGG 0.384079 1:+42473083 None:intergenic
CCTATGGAATTCATGCGTTT+AGG 0.407607 1:+42472970 None:intergenic
CTAGAACTTGTTGAGGTGTT+GGG 0.408328 1:-42472907 MsaT002507.1:CDS
AGGCTTTAGTTTCAAATACT+TGG 0.421254 1:+42472990 None:intergenic
ACTTTCTCAAAGCGTCGAAC+GGG 0.442601 1:-42473132 MsaT002507.1:CDS
GCAGCAACAACATCAACTCC+TGG 0.473203 1:+42473012 None:intergenic
CTATTGTTGTGTTCTCTCCA+GGG 0.489839 1:-42473059 MsaT002507.1:CDS
CACTTTCTCAAAGCGTCGAA+CGG 0.490261 1:-42473133 MsaT002507.1:CDS
ATCAGAAGAGGAGTTTCCTA+TGG 0.510389 1:+42472954 None:intergenic
TCTAGAACTTGTTGAGGTGT+TGG 0.548141 1:-42472908 MsaT002507.1:CDS
GAAAGACTCCAACACGAGGC+AGG 0.554822 1:-42473157 MsaT002507.1:CDS
CCTAAACGCATGAATTCCAT+AGG 0.557834 1:-42472970 MsaT002507.1:CDS
AAAGAATAAGGATTGTTCCC+TGG 0.565551 1:+42473042 None:intergenic
GTCGCAAAATTAAAATAGAG+AGG 0.572448 1:-42473182 MsaT002507.1:CDS
ATTGAATCTAGAACTTGTTG+AGG 0.572715 1:-42472914 MsaT002507.1:CDS
CAGCAACAACATCAACTCCT+GGG 0.611229 1:+42473013 None:intergenic
TCGCAAAATTAAAATAGAGA+GGG 0.620927 1:-42473181 MsaT002507.1:CDS
GAAAGTGACCTGCCTCGTGT+TGG 0.631102 1:+42473149 None:intergenic
CATATTCGGAGAATCAGAAG+AGG 0.656024 1:+42472942 None:intergenic
GTGTTGGGACAAGTTCAAGA+AGG 0.657260 1:-42472892 MsaT002507.1:CDS
GGGTGAAAGACTCCAACACG+AGG 0.715970 1:-42473161 MsaT002507.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 42472837 42473211 42472837 ID=MsaG002507
Chr1 mRNA 42472837 42473211 42472837 ID=MsaT002507.1;Parent=MsaG002507
Chr1 exon 42472837 42473211 42472837 ID=MsaT002507.1.exon1;Parent=MsaT002507.1
Chr1 CDS 42472837 42473211 42472837 ID=cds.MsaT002507.1;Parent=MsaT002507.1
Gene Sequence

>MsaT002507.1

ATGGGTCGTCGCAAAATTAAAATAGAGAGGGTGAAAGACTCCAACACGAGGCAGGTCACTTTCTCAAAGCGTCGAACGGGCTTATTCAAGAAAGCAAATGAATTGTCCATTTTGTGCGGAGCTGAAGTTGCTATTGTTGTGTTCTCTCCAGGGAACAATCCTTATTCTTTTGGTCACCCAGGAGTTGATGTTGTTGCTGCCAAGTATTTGAAACTAAAGCCTAAACGCATGAATTCCATAGGAAACTCCTCTTCTGATTCTCCGAATATGGAAAAATTGAATCTAGAACTTGTTGAGGTGTTGGGACAAGTTCAAGAAGGTGAAAAGCAAGCTGAGAATCATGATGAGATTCCGAAGCAAAACAATGTGACATAA
Protein sequence

>MsaT002507.1

MGRRKIKIERVKDSNTRQVTFSKRRTGLFKKANELSILCGAEVAIVVFSPGNNPYSFGHPGVDVVAAKYLKLKPKRMNSIGNSSSDSPNMEKLNLELVEVLGQVQEGEKQAENHDEIPKQNNVT*