AlfalfaGEDB | MsaG002722

M. sativa ssp. caerulea / MsaG002722

KEGG: K12606
GO: -
PFAM: PF04078.16

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG002722	XP_024638784.2	94.340	265	15	0	1	265	1	265	0.0	509

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG002722	sp\|Q6P819\|CNOT9_XENTR	55.508	236	103	1	18	253	9	242	5.26e-87	264

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG002722	tr\|G7I8I6\|G7I8I6_MEDTR	94.340	265	15	0	1	265	1	265	0.0	509

TFs/TRs:

Gene ID	Type	Classification
MsaG002722	TR	Rcd1-like

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000045	MsaG002722	0.824532	1.358556e-53	3.374152e-51
MsaG000029	MsaG002722	0.820268	1.314937e-52	2.912735e-50
MsaG000083	MsaG002722	0.808937	4.130378e-50	6.875070e-48
MsaG000686	MsaG002722	0.810869	1.592700e-50	2.778115e-48
MsaG000940	MsaG002722	0.822296	4.502651e-53	1.052494e-50
MsaG000961	MsaG002722	0.837586	8.741311e-57	3.165444e-54
MsaG001021	MsaG002722	0.826676	4.240604e-54	1.117443e-51
MsaG001022	MsaG002722	0.826102	5.799885e-54	1.504202e-51
MsaG001181	MsaG002722	0.820189	1.370480e-52	3.029489e-50
MsaG001196	MsaG002722	0.836051	2.143716e-56	7.410364e-54
MsaG001367	MsaG002722	0.805295	2.417947e-49	3.690924e-47
MsaG001434	MsaG002722	0.854118	2.935349e-61	1.837595e-58
MsaG001558	MsaG002722	0.807626	7.837607e-50	1.264024e-47
MsaG001739	MsaG002722	0.816474	9.424828e-52	1.891311e-49
MsaG002184	MsaG002722	0.807123	1.000889e-49	1.594988e-47
MsaG002201	MsaG002722	0.814402	2.710423e-51	5.161238e-49
MsaG002548	MsaG002722	0.834011	6.967223e-56	2.265646e-53
MsaG002560	MsaG002722	0.830797	4.318909e-55	1.278751e-52
MsaG002563	MsaG002722	0.838476	5.170839e-57	1.924658e-54
MsaG002722	MsaG002723	0.820874	9.559099e-53	2.151541e-50
MsaG002722	MsaG003067	0.821743	6.037809e-53	1.390644e-50
MsaG002722	MsaG003105	0.810234	2.181080e-50	3.746005e-48
MsaG002722	MsaG003136	0.836282	1.874857e-56	6.526525e-54
MsaG002722	MsaG003257	0.833620	8.716817e-56	2.802343e-53
MsaG002722	MsaG003327	0.829618	8.357659e-55	2.392511e-52
MsaG002722	MsaG003381	0.809541	3.069979e-50	5.185021e-48
MsaG002722	MsaG003461	0.837381	9.858631e-57	3.547814e-54
MsaG002722	MsaG003708	0.801481	1.479117e-48	2.067866e-46
MsaG002722	MsaG003815	0.832297	1.852463e-55	5.728954e-53
MsaG002722	MsaG003854	0.852325	9.529106e-61	5.599083e-58
MsaG002722	MsaG003870	0.815894	1.268072e-51	2.507473e-49
MsaG002722	MsaG003927	0.802744	8.156136e-49	1.173586e-46
MsaG002722	MsaG003937	0.829932	7.014543e-55	2.026130e-52
MsaG002722	MsaG003963	0.832015	2.173513e-55	6.667631e-53
MsaG002722	MsaG003974	0.828391	1.651253e-54	4.565583e-52
MsaG002722	MsaG004114	0.802891	7.605455e-49	1.098080e-46
MsaG002722	MsaG004164	0.804447	3.629061e-49	5.431728e-47
MsaG002722	MsaG004308	0.824922	1.100939e-53	2.763571e-51
MsaG002722	MsaG004368	0.819855	1.632664e-52	3.576933e-50
MsaG002722	MsaG004340	0.820921	9.326254e-53	2.101823e-50
MsaG002722	MsaG004590	0.804990	2.798877e-49	4.242334e-47
MsaG002722	MsaG005045	0.812061	8.799043e-51	1.580298e-48
MsaG002722	MsaG005055	0.814634	2.409559e-51	4.614987e-49
MsaG002722	MsaG005058	0.840331	1.715133e-57	6.765386e-55
MsaG002722	MsaG005138	0.800101	2.820660e-48	3.822330e-46
MsaG002722	MsaG005201	0.831211	3.422204e-55	1.025368e-52
MsaG002722	MsaG005294	0.807015	1.054739e-49	1.676529e-47
MsaG002722	MsaG006124	0.803993	4.507920e-49	6.676505e-47
MsaG002722	MsaG006250	0.820210	1.355852e-52	2.998772e-50
MsaG002722	MsaG006254	0.818633	3.089428e-52	6.554986e-50
MsaG002722	MsaG006257	0.841872	6.778913e-58	2.807708e-55
MsaG002722	MsaG006419	0.801717	1.323377e-48	1.860114e-46
MsaG002722	MsaG006558	0.801369	1.558903e-48	2.173903e-46
MsaG002722	MsaG006752	0.814513	2.562715e-51	4.893411e-49
MsaG002722	MsaG007112	0.800924	1.920527e-48	2.651336e-46
MsaG002722	MsaG007116	0.825719	7.145510e-54	1.833541e-51
MsaG002722	MsaG007206	0.823588	2.257967e-53	5.465847e-51
MsaG002722	MsaG007357	0.823436	2.449814e-53	5.905612e-51
MsaG002722	MsaG007641	0.800687	2.145316e-48	2.946060e-46
MsaG002722	MsaG007658	0.801107	1.762862e-48	2.443736e-46
MsaG002722	MsaG007713	0.805616	2.072813e-49	3.187822e-47
MsaG002722	MsaG007912	0.803565	5.524273e-49	8.101115e-47
MsaG002722	MsaG008110	0.806484	1.363790e-49	2.140889e-47
MsaG002722	MsaG008112	0.831076	3.692295e-55	1.102020e-52
MsaG002722	MsaG008193	0.828849	1.281637e-54	3.589055e-52
MsaG002722	MsaG008250	0.829728	7.858477e-55	2.256658e-52
MsaG002722	MsaG008631	0.853659	3.974339e-61	2.447422e-58
MsaG002722	MsaG008650	0.814882	2.124341e-51	4.094363e-49
MsaG002722	MsaG009073	0.811023	1.475899e-50	2.584106e-48
MsaG002722	MsaG009140	0.826403	4.922960e-54	1.287464e-51
MsaG002722	MsaG009206	0.824304	1.536475e-53	3.792404e-51
MsaG002722	MsaG009210	0.828207	1.828037e-54	5.028183e-52
MsaG002722	MsaG009281	0.813242	4.868640e-51	9.004971e-49
MsaG002722	MsaG009629	0.806767	1.189476e-49	1.879699e-47
MsaG002722	MsaG009848	0.828908	1.240275e-54	3.479108e-52
MsaG002722	MsaG009859	0.806735	1.207659e-49	1.907028e-47
MsaG002722	MsaG010051	0.811496	1.166480e-50	2.066216e-48
MsaG002722	MsaG010203	0.813152	5.092892e-51	9.398664e-49
MsaG002722	MsaG010594	0.804455	3.615782e-49	5.412789e-47
MsaG002722	MsaG010862	0.849366	6.431965e-60	3.411731e-57
MsaG002722	MsaG011144	0.801463	1.491606e-48	2.084503e-46
MsaG002722	MsaG011256	0.849202	7.143007e-60	3.767575e-57
MsaG002722	MsaG011248	0.800794	2.041115e-48	2.809680e-46
MsaG002722	MsaG011459	0.811834	9.859369e-51	1.760937e-48
MsaG002722	MsaG012169	0.836232	1.929407e-56	6.706359e-54
MsaG002722	MsaG012213	0.810929	1.546394e-50	2.701292e-48
MsaG002722	MsaG012331	0.814626	2.419744e-51	4.633554e-49
MsaG002722	MsaG012339	0.821835	5.750092e-53	1.327608e-50
MsaG002722	MsaG012376	0.811279	1.299452e-50	2.289539e-48
MsaG002722	MsaG012378	0.805658	2.030680e-49	3.126140e-47
MsaG002722	MsaG012772	0.804950	2.852555e-49	4.319700e-47
MsaG002722	MsaG013413	0.833915	7.359684e-56	2.386649e-53
MsaG002722	MsaG013849	0.818641	3.077126e-52	6.530107e-50
MsaG002722	MsaG014058	0.821221	7.960725e-53	1.808354e-50
MsaG002722	MsaG015305	0.801632	1.377874e-48	1.932963e-46
MsaG002722	MsaG015359	0.809030	3.946178e-50	6.583125e-48
MsaG002722	MsaG015938	0.808925	4.155790e-50	6.915381e-48
MsaG002722	MsaG016128	0.806682	1.239486e-49	1.954809e-47
MsaG002722	MsaG016131	0.800413	2.437906e-48	3.327166e-46
MsaG002722	MsaG016530	0.809013	3.979393e-50	6.635856e-48
MsaG002722	MsaG017072	0.813489	4.299641e-51	8.001810e-49
MsaG002722	MsaG017270	0.829009	1.172343e-54	3.297950e-52
MsaG002722	MsaG017459	0.820933	9.266686e-53	2.089048e-50
MsaG002722	MsaG017499	0.818647	3.066912e-52	6.509553e-50
MsaG002722	MsaG017532	0.828652	1.429231e-54	3.980538e-52
MsaG002722	MsaG017771	0.800298	2.572525e-48	3.501634e-46
MsaG002722	MsaG018254	0.801813	1.265080e-48	1.782084e-46
MsaG002722	MsaG018351	0.809288	3.477119e-50	5.836491e-48
MsaG002722	MsaG018373	0.831741	2.538413e-55	7.725078e-53
MsaG002722	MsaG018400	0.827338	2.950469e-54	7.919928e-52
MsaG002722	MsaG018670	0.821678	6.249841e-53	1.436998e-50
MsaG002722	MsaG018875	0.819488	1.978964e-52	4.293949e-50
MsaG002722	MsaG018931	0.805216	2.511943e-49	3.827396e-47
MsaG002722	MsaG019467	0.800820	2.015931e-48	2.776586e-46
MsaG002722	MsaG019571	0.851788	1.351965e-60	7.795181e-58
MsaG002722	MsaG019906	0.809933	2.530779e-50	4.314831e-48
MsaG002722	MsaG020066	0.836583	1.572265e-56	5.522691e-54
MsaG002722	MsaG020345	0.802108	1.101103e-48	1.561471e-46
MsaG002722	MsaG020392	0.805108	2.645380e-49	4.020582e-47
MsaG002722	MsaG020532	0.822025	5.198784e-53	1.206443e-50
MsaG002722	MsaG020694	0.811043	1.460979e-50	2.559287e-48
MsaG002722	MsaG020744	0.805377	2.324758e-49	3.555472e-47
MsaG002722	MsaG020892	0.833344	1.020457e-55	3.254130e-53
MsaG002722	MsaG021087	0.800552	2.285353e-48	3.128688e-46
MsaG002722	MsaG021106	0.845010	9.934815e-59	4.554545e-56
MsaG002722	MsaG021477	0.813526	4.218840e-51	7.859108e-49
MsaG002722	MsaG021542	0.837900	7.264090e-57	2.656045e-54
MsaG002722	MsaG021868	0.823259	2.692621e-53	6.460178e-51
MsaG002722	MsaG022094	0.833543	9.111371e-56	2.922490e-53
MsaG002722	MsaG022445	0.809381	3.322131e-50	5.588947e-48
MsaG002722	MsaG022737	0.810107	2.322904e-50	3.977181e-48
MsaG002722	MsaG022780	0.806508	1.347863e-49	2.117093e-47
MsaG002722	MsaG022866	0.803212	6.531992e-49	9.501124e-47
MsaG002722	MsaG022938	0.808210	5.896364e-50	9.644041e-48
MsaG002722	MsaG023614	0.829119	1.102757e-54	3.111928e-52
MsaG002722	MsaG023704	0.837394	9.781231e-57	3.521457e-54
MsaG002722	MsaG024315	0.819910	1.586788e-52	3.481536e-50
MsaG002722	MsaG024331	0.815460	1.582808e-51	3.095564e-49
MsaG002722	MsaG024422	0.833687	8.390976e-56	2.702970e-53
MsaG002722	MsaG024640	0.800513	2.327654e-48	3.183762e-46
MsaG002722	MsaG025282	0.812639	6.590732e-51	1.200798e-48
MsaG002722	MsaG025405	0.803293	6.287234e-49	9.162068e-47
MsaG002722	MsaG025416	0.819467	2.001004e-52	4.339372e-50
MsaG002722	MsaG025440	0.818418	3.454645e-52	7.288834e-50
MsaG002722	MsaG025714	0.805544	2.145596e-49	3.294117e-47
MsaG002722	MsaG026974	0.816756	8.155495e-52	1.648549e-49
MsaG002722	MsaG027087	0.800282	2.591682e-48	3.526433e-46
MsaG002722	MsaG027160	0.815765	1.355054e-51	2.670589e-49
MsaG002722	MsaG027193	0.811252	1.317225e-50	2.319250e-48
MsaG002722	MsaG027306	0.837285	1.043128e-56	3.742735e-54
MsaG002722	MsaG027414	0.809578	3.014444e-50	5.095856e-48
MsaG002722	MsaG027423	0.825255	9.191547e-54	2.328348e-51
MsaG002722	MsaG027610	0.803869	4.781503e-49	7.061348e-47
MsaG002722	MsaG027672	0.816430	9.640601e-52	1.932438e-49
MsaG002722	MsaG027752	0.818737	2.927378e-52	6.227773e-50
MsaG002722	MsaG028461	0.860780	3.202869e-63	2.565654e-60
MsaG002722	MsaG028644	0.830913	4.048403e-55	1.202643e-52
MsaG002722	MsaG028746	0.804699	3.217312e-49	4.843615e-47
MsaG002722	MsaG028916	0.824539	1.353878e-53	3.363106e-51
MsaG002722	MsaG029191	0.815955	1.229641e-51	2.435214e-49
MsaG002722	MsaG029300	0.826868	3.816645e-54	1.011149e-51
MsaG002722	MsaG029512	0.820912	9.370388e-53	2.111231e-50
MsaG002722	MsaG029545	0.819965	1.541735e-52	3.387758e-50
MsaG002722	MsaG029922	0.811696	1.056185e-50	1.880009e-48
MsaG002722	MsaG030602	0.815582	1.487686e-51	2.918502e-49
MsaG002722	MsaG030592	0.809232	3.573437e-50	5.990141e-48
MsaG002722	MsaG030804	0.805011	2.771564e-49	4.202955e-47
MsaG002722	MsaG030992	0.818429	3.436014e-52	7.251384e-50
MsaG002722	MsaG031645	0.809651	2.909081e-50	4.926184e-48
MsaG002722	MsaG033312	0.802514	9.091071e-49	1.301296e-46
MsaG002722	MsaG033776	0.829600	8.438476e-55	2.414470e-52
MsaG002722	MsaG034221	0.809222	3.592141e-50	6.019972e-48
MsaG002722	MsaG034149	0.805716	1.975219e-49	3.044884e-47
MsaG002722	MsaG034248	0.809922	2.544387e-50	4.336948e-48
MsaG002722	MsaG034252	0.852696	7.475969e-61	4.450065e-58
MsaG002722	MsaG034308	0.826111	5.773671e-54	1.497750e-51
MsaG002722	MsaG034416	0.801759	1.297457e-48	1.825438e-46
MsaG002722	MsaG034459	0.836803	1.383284e-56	4.891166e-54
MsaG002722	MsaG034851	0.831468	2.961608e-55	8.940462e-53
MsaG002722	MsaG034957	0.818179	3.910698e-52	8.200413e-50
MsaG002722	MsaG035118	0.834312	5.861340e-56	1.923376e-53
MsaG002722	MsaG035377	0.800815	2.020762e-48	2.782925e-46
MsaG002722	MsaG035456	0.804205	4.074172e-49	6.063971e-47
MsaG002722	MsaG035634	0.800537	2.301385e-48	3.149603e-46
MsaG002722	MsaG035675	0.801019	1.836723e-48	2.541115e-46
MsaG002722	MsaG035700	0.825829	6.731805e-54	1.732638e-51
MsaG002722	MsaG036577	0.847185	2.560573e-59	1.261685e-56
MsaG002722	MsaG036856	0.800078	2.850227e-48	3.860521e-46
MsaG002722	MsaG036844	0.813983	3.350424e-51	6.313167e-49
MsaG002722	MsaG037211	0.815675	1.418331e-51	2.789061e-49
MsaG002722	MsaG038043	0.815259	1.753349e-51	3.411802e-49
MsaG002722	MsaG039410	0.835490	2.969824e-56	1.009502e-53
MsaG002722	MsaG039918	0.807959	6.665406e-50	1.083624e-47
MsaG002722	MsaG040143	0.807726	7.465190e-50	1.206898e-47
MsaG002722	MsaG040208	0.819129	2.386720e-52	5.130335e-50
MsaG002722	MsaG040343	0.816285	1.038549e-51	2.074134e-49
MsaG002722	MsaG040365	0.821241	7.875153e-53	1.789871e-50
MsaG002722	MsaG041463	0.812801	6.077052e-51	1.111692e-48
MsaG002722	MsaG041587	0.823338	2.581025e-53	6.205819e-51
MsaG002722	MsaG041785	0.824110	1.705995e-53	4.188516e-51
MsaG002722	MsaG042767	0.817428	5.768366e-52	1.186406e-49
MsaG002722	MsaG043881	0.812019	8.989386e-51	1.612856e-48
MsaG002722	MsaG044445	0.811383	1.234081e-50	2.179883e-48
MsaG002722	MsaG044925	0.824261	1.572345e-53	3.876235e-51
MsaG002722	MsaG045263	0.813251	4.845199e-51	8.963775e-49
MsaG002722	MsaG045267	0.820813	9.873022e-53	2.218557e-50
MsaG002722	MsaG045438	0.845750	6.277049e-59	2.948587e-56
MsaG002722	MsaG045424	0.844060	1.785112e-58	7.930682e-56
MsaG002722	MsaG045492	0.808214	5.883490e-50	9.624040e-48
MsaG002722	MsaG045558	0.841473	8.628018e-58	3.528349e-55
MsaG002722	MsaG045760	0.814041	3.253309e-51	6.138955e-49
MsaG002722	MsaG045813	0.806270	1.512486e-49	2.362323e-47
MsaG002722	MsaG045904	0.831556	2.816708e-55	8.525501e-53
MsaG002722	MsaG046299	0.816928	7.461398e-52	1.515001e-49
MsaG002722	MsaG046562	0.824403	1.457178e-53	3.606238e-51
MsaG002722	MsaG046628	0.826654	4.291036e-54	1.130058e-51
MsaG002722	MsaG046702	0.805301	2.411276e-49	3.681239e-47
MsaG002722	MsaG046841	0.803111	6.854862e-49	9.947583e-47
MsaG002722	MsaG046798	0.802575	8.831164e-49	1.265890e-46
MsaG002722	MsaG046812	0.802451	9.366797e-49	1.338835e-46
MsaG002722	MsaG046908	0.872352	6.966824e-67	8.924920e-64
MsaG002722	MsaG047044	0.824596	1.312852e-53	3.266190e-51
MsaG002722	MsaG047101	0.805792	1.903894e-49	2.940171e-47
MsaG002722	MsaG047188	0.821743	6.037809e-53	1.390644e-50
MsaG002722	MsaG001526	0.820142	1.404946e-52	3.101754e-50
MsaG002722	MsaG001077	0.810383	2.026831e-50	3.493801e-48
MsaG002722	MsaG003487	0.845190	8.891106e-59	4.099373e-56
MsaG002722	MsaG006154	0.839451	2.900415e-57	1.112929e-54
MsaG002722	MsaG008905	0.813321	4.679688e-51	8.672458e-49
MsaG002722	MsaG010534	0.800946	1.900508e-48	2.625041e-46
MsaG002722	MsaG011837	0.812017	8.995130e-51	1.613833e-48
MsaG002722	MsaG011653	0.801274	1.629687e-48	2.267687e-46
MsaG002722	MsaG019705	0.805016	2.764777e-49	4.193213e-47
MsaG002722	MsaG023300	0.803948	4.605659e-49	6.814194e-47
MsaG002722	MsaG018381	0.807118	1.003291e-49	1.598627e-47
MsaG002722	MsaG018051	0.802117	1.096489e-48	1.555259e-46
MsaG002722	MsaG023050	0.820632	1.085675e-52	2.427976e-50
MsaG002722	MsaG028385	0.807412	8.695351e-50	1.395236e-47
MsaG002722	MsaG027227	0.816271	1.045721e-51	2.087753e-49
MsaG002722	MsaG029394	0.809314	3.433242e-50	5.766316e-48
MsaG002722	MsaG027453	0.800293	2.579343e-48	3.510424e-46
MsaG002722	MsaG026809	0.824080	1.733616e-53	4.252829e-51
MsaG002722	MsaG034467	0.858873	1.195294e-62	8.904761e-60
MsaG002722	MsaG034293	0.801417	1.524201e-48	2.127854e-46
MsaG002722	MsaG030637	0.814025	3.280769e-51	6.188254e-49
MsaG002722	MsaG033838	0.812543	6.915303e-51	1.256978e-48
MsaG002722	MsaG032967	0.830709	4.537531e-55	1.340041e-52
MsaG002722	MsaG031512	0.819614	1.852275e-52	4.032204e-50
MsaG002722	MsaG031473	0.825152	9.718105e-54	2.454821e-51
MsaG002722	MsaG033438	0.833690	8.372360e-56	2.697266e-53
MsaG002722	MsaG031225	0.808321	5.584452e-50	9.158186e-48
MsaG002722	MsaG030582	0.807290	9.229959e-50	1.476676e-47
MsaG002722	MsaG031967	0.815866	1.286444e-51	2.541972e-49
MsaG002722	MsaG034539	0.825860	6.619417e-54	1.705202e-51
MsaG002722	MsaG030727	0.806903	1.113204e-49	1.764776e-47
MsaG002722	MsaG033283	0.829710	7.939379e-55	2.278685e-52
MsaG002722	MsaG036522	0.830260	5.836910e-55	1.701851e-52
MsaG002722	MsaG037840	0.816773	8.081484e-52	1.634329e-49
MsaG002722	MsaG038277	0.808002	6.524624e-50	1.061869e-47
MsaG002722	MsaG039380	0.800674	2.158571e-48	2.963364e-46
MsaG002722	MsaG037022	0.808015	6.483499e-50	1.055513e-47
MsaG002722	MsaG036648	0.804879	2.952461e-49	4.463551e-47
MsaG002722	MsaG036743	0.804617	3.346729e-49	5.028798e-47
MsaG002722	MsaG037217	0.806988	1.068578e-49	1.697446e-47
MsaG002722	MsaG034934	0.820506	1.160473e-52	2.586675e-50
MsaG002722	MsaG042525	0.831247	3.353862e-55	1.005938e-52
MsaG002722	MsaG042835	0.819746	1.728889e-52	3.776732e-50
MsaG002722	MsaG041441	0.809495	3.140327e-50	5.298078e-48
MsaG002722	MsaG043242	0.825952	6.294548e-54	1.625713e-51
MsaG002722	MsaG043341	0.805415	2.282306e-49	3.493589e-47
MsaG002722	MsaG047176	0.810703	1.730101e-50	3.005499e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG002722	MtrunA17_Chr1g0177151	94.340	265	15	0	1	265	1	265	0.0	509
MsaG002722	MtrunA17_Chr7g0224601	68.304	224	67	2	34	253	28	251	8.27e-107	311
MsaG002722	MtrunA17_Chr3g0099561	68.182	220	70	0	34	253	26	245	2.72e-105	307
MsaG002722	MtrunA17_Chr8g0392781	51.645	304	106	3	1	263	1	304	1.54e-97	290
MsaG002722	MtrunA17_Chr6g0477171	62.814	199	74	0	58	256	48	246	1.24e-85	256
MsaG002722	MtrunA17_Chr5g0444621	59.574	188	76	0	66	253	52	239	2.26e-77	235
MsaG002722	MtrunA17_Chr3g0083821	56.303	119	52	0	52	170	12	130	3.56e-40	135
MsaG002722	MtrunA17_Chr3g0083811	58.333	72	30	0	182	253	1	72	3.71e-23	91.3
MsaG002722	MtrunA17_Chr5g0444631	66.038	53	18	0	108	160	4	56	5.22e-17	73.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG002722	AT3G20800.1	62.548	259	90	3	1	253	1	258	5.84e-106	310
MsaG002722	AT5G12980.1	61.176	255	96	2	1	253	1	254	8.35e-102	299
MsaG002722	AT2G32550.2	36.111	216	124	4	49	253	67	279	1.79e-37	134
MsaG002722	AT2G32550.3	36.098	205	117	4	60	253	39	240	3.81e-36	130
MsaG002722	AT2G32550.1	35.294	187	107	4	78	253	2	185	4.49e-31	115

Find 49 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGCTCTTCATTTGCTCTCTA+AGG	0.219918	1:-46184261	MsaT002722.1:intron
CTAACTTACTTGATGTATTA+AGG	0.245270	1:+46181695	None:intergenic
TGCCTACGCAATATGGAAAT+TGG	0.348006	1:-46181441	MsaT002722.1:CDS
GCCGTTGTGCCTACGCAATA+TGG	0.352059	1:-46181448	MsaT002722.1:CDS
CAATACTCTTGCTCTACTTC+AGG	0.377796	1:-46182741	MsaT002722.1:intron
AGCAGTTAAGATGGTGGAGT+TGG	0.389913	1:+46181071	None:intergenic
AGGAAGGGATACAAATATAT+AGG	0.402029	1:+46181715	None:intergenic
GATTTAAGACTTGCCAGTCT+TGG	0.402589	1:-46181661	MsaT002722.1:CDS
ATGAATGAAAACTTTGTGTC+AGG	0.407209	1:+46182571	None:intergenic
TAAGATGGTGGAGTTGGGTT+CGG	0.419375	1:+46181077	None:intergenic
CCGTTATTGTGGAATTCAAT+TGG	0.431635	1:-46183255	MsaT002722.1:CDS
TTCTTCAAGGAGGGTGATTG+AGG	0.449123	1:+46184389	None:intergenic
TTTGTCAGATGATGATGGTT+TGG	0.451681	1:-46181252	MsaT002722.1:CDS
GAGGAAGGAAGCAGTTAAGA+TGG	0.457991	1:+46181062	None:intergenic
GTGCTGGAGGCAGATGTAAC+AGG	0.465456	1:+46184353	None:intergenic
CATCTTGTTGCCAATGGTGC+TGG	0.465484	1:+46184337	None:intergenic
CAGTTGGTCGAGCTTTGGAC+AGG	0.472419	1:-46181196	MsaT002722.1:CDS
GCAAGTCTTAAATCTTCAAA+TGG	0.486164	1:+46181670	None:intergenic
ACATCTGCCTCCAGCACCAT+TGG	0.494495	1:-46184347	MsaT002722.1:CDS
GCAGTTAAGATGGTGGAGTT+GGG	0.497274	1:+46181072	None:intergenic
AAGAACTCGCACCGTTATTG+TGG	0.506453	1:-46183266	MsaT002722.1:CDS
CTTACTTGATGTATTAAGGA+AGG	0.509839	1:+46181699	None:intergenic
TCTTCAAGGAGGGTGATTGA+GGG	0.516540	1:+46184390	None:intergenic
CATATTCGAGTTGATTGTGT+AGG	0.521680	1:+46182764	None:intergenic
CCAATTGAATTCCACAATAA+CGG	0.522825	1:+46183255	None:intergenic
GGCAGCAATGACTCCAAGAC+TGG	0.526684	1:+46181648	None:intergenic
TCGAGCTTTGGACAGGATGT+TGG	0.529344	1:-46181189	MsaT002722.1:CDS
ATATTCACAGGTTAAGACTA+AGG	0.533680	1:-46181505	MsaT002722.1:intron
TTACTTGATGTATTAAGGAA+GGG	0.537664	1:+46181700	None:intergenic
AGTCATTGCTGCCATGGTAA+AGG	0.543352	1:-46181638	MsaT002722.1:intron
GAAGGAAGCAGTTAAGATGG+TGG	0.550389	1:+46181065	None:intergenic
TCTTGGAGTCATTGCTGCCA+TGG	0.555856	1:-46181644	MsaT002722.1:CDS
AATTCATTATTCTTCAAGGA+GGG	0.558130	1:+46184380	None:intergenic
TTCAAGGAGGGTGATTGAGG+GGG	0.561905	1:+46184392	None:intergenic
AGCTTTAAAAGACGAGGTGA+AGG	0.570450	1:+46181149	None:intergenic
TCAAGGAGGGTGATTGAGGG+GGG	0.591467	1:+46184393	None:intergenic
GCATTACTTCAGTTGCGAGA+AGG	0.595531	1:+46181469	None:intergenic
TGAATGAAAACTTTGTGTCA+GGG	0.602907	1:+46182572	None:intergenic
TGCCAATTTCCATATTGCGT+AGG	0.604311	1:+46181439	None:intergenic
ATACAACATCTTGTTGCCAA+TGG	0.605197	1:+46184331	None:intergenic
CTTGTTGCCAATGGTGCTGG+AGG	0.622571	1:+46184340	None:intergenic
TCCATATTGCGTAGGCACAA+CGG	0.628181	1:+46181447	None:intergenic
GTTAAGACTAAGGAAGCGAT+AGG	0.628788	1:-46181495	MsaT002722.1:CDS
AAATTCATTATTCTTCAAGG+AGG	0.632490	1:+46184379	None:intergenic
CTTCAAGGAGGGTGATTGAG+GGG	0.647804	1:+46184391	None:intergenic
ATCATAAGCTTTAAAAGACG+AGG	0.660763	1:+46181143	None:intergenic
TTTGTGAGACTTGTATAACA+CGG	0.661280	1:+46181119	None:intergenic
TGAAAACTTTGTGTCAGGGT+GGG	0.675917	1:+46182576	None:intergenic
ATGAAAACTTTGTGTCAGGG+TGG	0.707370	1:+46182575	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	46181076	46184426	46181076	ID=MsaG002722
Chr1	mRNA	46181076	46184426	46181076	ID=MsaT002722.1;Parent=MsaG002722
Chr1	exon	46181076	46181300	46181076	ID=MsaT002722.1.exon7;Parent=MsaT002722.1
Chr1	CDS	46181076	46181300	46181076	ID=cds.MsaT002722.1;Parent=MsaT002722.1
Chr1	exon	46181422	46181517	46181422	ID=MsaT002722.1.exon6;Parent=MsaT002722.1
Chr1	CDS	46181422	46181517	46181422	ID=cds.MsaT002722.1;Parent=MsaT002722.1
Chr1	exon	46181639	46181745	46181639	ID=MsaT002722.1.exon5;Parent=MsaT002722.1
Chr1	CDS	46181639	46181745	46181639	ID=cds.MsaT002722.1;Parent=MsaT002722.1
Chr1	exon	46182566	46182608	46182566	ID=MsaT002722.1.exon4;Parent=MsaT002722.1
Chr1	CDS	46182566	46182608	46182566	ID=cds.MsaT002722.1;Parent=MsaT002722.1
Chr1	exon	46182742	46182831	46182742	ID=MsaT002722.1.exon3;Parent=MsaT002722.1
Chr1	CDS	46182742	46182831	46182742	ID=cds.MsaT002722.1;Parent=MsaT002722.1
Chr1	exon	46183233	46183304	46183233	ID=MsaT002722.1.exon2;Parent=MsaT002722.1
Chr1	CDS	46183233	46183304	46183233	ID=cds.MsaT002722.1;Parent=MsaT002722.1
Chr1	exon	46184262	46184426	46184262	ID=MsaT002722.1.exon1;Parent=MsaT002722.1
Chr1	CDS	46184262	46184426	46184262	ID=cds.MsaT002722.1;Parent=MsaT002722.1

Gene Sequence

>MsaT002722.1

ATGGCGAATTTCCCCCCTCAATCACCCTCCTTGAAGAATAATGAATTTTTTCCTGTTACATCTGCCTCCAGCACCATTGGCAACAAGATGTTGTATGCTGAGCGTCTTGTTATTGAACTGAGCAACCCCGATCTACGAGAAAATGCTCTTCATTTGCTCTCTAAGATGACAGATTTGTTTCAAGAACTCGCACCGTTATTGTGGAATTCAATTGGTACTATTGCAATATTTTTACAGGAAATAATTACAATATATCCTGCTCTTTCACCAGAAAATCTTACTCCTACACAATCAACTCGAATATGCAATACTCTTGCTCTACTTCAGTGTGTGGCTTCCCACCCTGACACAAAGTTTTCATTCATGAAAGCTAACATACCTATATATTTGTATCCCTTCCTTAATACATCAAGTAAGTTAGCTCCATTTGAAGATTTAAGACTTGCCAGTCTTGGAGTCATTGCTGCCATGGTAAAGGTTAAGACTAAGGAAGCGATAGGCTTCCTTCTCGCAACTGAAGTAATGCCGTTGTGCCTACGCAATATGGAAATTGGCAAAGAATTGTCAAAAACTGTTGCAACATTTATCGTTGAGAAAATTTTGTCAGATGATGATGGTTTGGCGTATGTTTGTGCTACACCAGATCGTTTTTTTGCAGTTGGTCGAGCTTTGGACAGGATGTTGGCAAGTGTTGACAATCAACCTTCACCTCGTCTTTTAAAGCTTATGATTCCGTGTTATACAAGTCTCACAAAAAATGTAGGGTTGTTTAAGCCGAACCCAACTCCACCATCTTAA

Protein sequence

>MsaT002722.1

MANFPPQSPSLKNNEFFPVTSASSTIGNKMLYAERLVIELSNPDLRENALHLLSKMTDLFQELAPLLWNSIGTIAIFLQEIITIYPALSPENLTPTQSTRICNTLALLQCVASHPDTKFSFMKANIPIYLYPFLNTSSKLAPFEDLRLASLGVIAAMVKVKTKEAIGFLLATEVMPLCLRNMEIGKELSKTVATFIVEKILSDDDGLAYVCATPDRFFAVGRALDRMLASVDNQPSPRLLKLMIPCYTSLTKNVGLFKPNPTPPS*