AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG002790


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG002790 MtrunA17_Chr7g0228401 52.008 498 150 5 1 412 1 495 4.24e-157 452
MsaG002790 MtrunA17_Chr1g0177901 90.094 212 17 1 206 417 4 211 2.45e-138 394
MsaG002790 MtrunA17_Chr7g0228481 52.273 440 160 9 1 414 1 416 5.94e-138 401
MsaG002790 MtrunA17_Chr7g0228531 52.273 440 160 9 1 414 1 416 6.04e-137 399
MsaG002790 MtrunA17_Chr7g0233161 47.584 269 116 3 4 247 82 350 4.85e-76 240
MsaG002790 MtrunA17_Chr7g0233061 37.831 415 190 10 1 404 1 358 6.13e-70 224
MsaG002790 MtrunA17_Chr4g0046181 45.221 272 124 4 1 247 1 272 1.48e-63 206
MsaG002790 MtrunA17_Chr7g0233151 54.971 171 60 5 246 414 1 156 4.80e-50 167
MsaG002790 MtrunA17_Chr3g0117511 45.833 192 96 3 133 320 119 306 7.36e-47 166
MsaG002790 MtrunA17_Chr4g0058991 57.480 127 53 1 194 320 207 332 1.02e-44 161
MsaG002790 MtrunA17_Chr5g0429661 47.879 165 75 4 196 351 122 284 5.92e-44 156
MsaG002790 MtrunA17_Chr7g0238631 60.825 97 38 0 196 292 113 209 1.03e-33 132
MsaG002790 MtrunA17_Chr1g0157731 53.846 104 47 1 196 298 91 194 8.69e-33 131
MsaG002790 MtrunA17_Chr3g0139671 53.846 104 47 1 196 298 85 188 5.39e-32 129
MsaG002790 MtrunA17_Chr4g0008551 53.535 99 46 0 196 294 38 136 7.07e-31 121
MsaG002790 MtrunA17_Chr5g0397841 54.082 98 45 0 193 290 107 204 1.28e-29 120
MsaG002790 MtrunA17_Chr5g0397841 33.333 99 62 2 195 289 54 152 2.98e-11 65.1
MsaG002790 MtrunA17_Chr2g0309911 49.000 100 50 1 194 292 11 110 9.25e-28 112
MsaG002790 MtrunA17_Chr3g0133601 48.544 103 53 0 189 291 30 132 1.10e-27 109
MsaG002790 MtrunA17_Chr4g0022911 39.869 153 82 4 192 338 11 159 3.24e-27 110
MsaG002790 MtrunA17_Chr4g0053431 52.083 96 46 0 196 291 5 100 5.19e-27 108
MsaG002790 MtrunA17_Chr5g0437321 50.515 97 48 0 196 292 19 115 1.21e-26 108
MsaG002790 MtrunA17_Chr8g0342541 45.283 106 57 1 190 294 8 113 1.54e-26 109
MsaG002790 MtrunA17_Chr4g0022901 40.310 129 74 2 191 316 10 138 2.21e-26 107
MsaG002790 MtrunA17_Chr5g0410961 44.340 106 58 1 190 294 8 113 2.48e-26 108
MsaG002790 MtrunA17_Chr5g0401731 41.791 134 71 2 187 313 6 139 6.67e-26 107
MsaG002790 MtrunA17_Chr4g0046171 48.571 140 55 4 277 414 1 125 7.48e-26 102
MsaG002790 MtrunA17_Chr5g0395281 45.631 103 55 1 190 291 8 110 9.47e-26 106
MsaG002790 MtrunA17_Chr2g0330041 45.283 106 57 1 190 294 8 113 1.25e-25 107
MsaG002790 MtrunA17_Chr8g0342521 44.340 106 58 1 190 294 8 113 1.55e-25 106
MsaG002790 MtrunA17_Chr4g0039971 45.631 103 55 1 190 291 9 111 1.62e-25 106
MsaG002790 MtrunA17_Chr2g0323351 41.463 123 68 2 190 311 8 127 1.99e-25 103
MsaG002790 MtrunA17_Chr2g0281071 47.059 102 53 1 194 294 13 114 2.00e-25 106
MsaG002790 MtrunA17_Chr3g0088461 46.226 106 56 1 190 294 18 123 2.28e-25 105
MsaG002790 MtrunA17_Chr2g0323411 45.283 106 57 1 190 294 8 113 2.30e-25 105
MsaG002790 MtrunA17_Chr4g0048511 46.078 102 54 1 194 294 13 114 2.75e-25 105
MsaG002790 MtrunA17_Chr1g0193371 37.931 145 77 4 194 335 12 146 2.91e-25 105
MsaG002790 MtrunA17_Chr3g0115821 45.631 103 55 1 190 291 8 110 3.23e-25 105
MsaG002790 MtrunA17_Chr3g0099131 46.535 101 53 1 192 291 39 139 3.59e-25 107
MsaG002790 MtrunA17_Chr5g0397231 34.437 151 97 2 190 339 8 157 4.94e-25 104
MsaG002790 MtrunA17_Chr4g0022931 45.631 103 55 1 191 292 10 112 5.62e-25 103
MsaG002790 MtrunA17_Chr7g0270891 31.156 199 126 4 194 389 12 202 9.49e-25 104
MsaG002790 MtrunA17_Chr5g0435101 36.145 166 95 4 190 350 7 166 1.42e-24 100
MsaG002790 MtrunA17_Chr1g0193801 38.636 132 69 3 194 322 12 134 2.19e-24 103
MsaG002790 MtrunA17_Chr8g0342481 44.860 107 57 2 190 294 8 114 2.24e-24 103
MsaG002790 MtrunA17_Chr1g0154031 48.485 99 50 1 194 291 76 174 2.47e-24 103
MsaG002790 MtrunA17_Chr4g0037141 40.769 130 69 3 196 324 14 136 2.49e-24 101
MsaG002790 MtrunA17_Chr4g0042501 40.945 127 74 1 164 289 72 198 3.23e-24 103
MsaG002790 MtrunA17_Chr8g0385321 44.660 103 55 2 196 296 14 116 5.05e-24 101
MsaG002790 MtrunA17_Chr8g0354661 41.129 124 68 3 172 291 13 135 5.79e-24 103
MsaG002790 MtrunA17_Chr8g0349261 44.231 104 56 2 190 291 9 112 6.75e-24 100
MsaG002790 MtrunA17_Chr7g0274581 46.465 99 52 1 194 291 12 110 6.85e-24 98.6
MsaG002790 MtrunA17_Chr8g0387421 41.748 103 59 1 190 291 8 110 7.49e-24 101
MsaG002790 MtrunA17_Chr1g0211161 44.000 100 55 1 194 292 13 112 8.80e-24 99.0
MsaG002790 MtrunA17_Chr5g0417621 47.959 98 51 0 192 289 130 227 8.96e-24 102
MsaG002790 MtrunA17_Chr2g0328771 40.870 115 63 2 194 303 20 134 8.97e-24 100
MsaG002790 MtrunA17_Chr6g0454921 48.421 95 49 0 196 290 15 109 9.44e-24 98.2
MsaG002790 MtrunA17_Chr7g0271241 44.898 98 53 1 194 290 12 109 1.10e-23 101
MsaG002790 MtrunA17_Chr1g0167661 44.444 108 57 2 194 298 12 119 1.27e-23 99.0
MsaG002790 MtrunA17_Chr4g0055981 42.727 110 60 2 196 302 57 166 1.28e-23 98.6
MsaG002790 MtrunA17_Chr6g0452271 41.509 106 61 1 190 294 8 113 1.29e-23 100
MsaG002790 MtrunA17_Chr4g0013361 36.646 161 86 5 194 345 10 163 1.35e-23 100
MsaG002790 MtrunA17_Chr4g0022891 39.286 112 67 1 190 300 8 119 1.84e-23 98.2
MsaG002790 MtrunA17_Chr3g0117091 43.137 102 57 1 194 294 12 113 1.92e-23 100
MsaG002790 MtrunA17_Chr3g0131121 45.631 103 54 2 196 296 14 116 2.09e-23 99.4
MsaG002790 MtrunA17_Chr8g0343831 44.444 99 54 1 194 291 8 106 2.72e-23 98.2
MsaG002790 MtrunA17_Chr4g0032401 41.525 118 66 2 176 292 1 116 2.74e-23 99.8
MsaG002790 MtrunA17_Chr8g0346561 45.455 99 53 1 194 291 12 110 4.13e-23 98.6
MsaG002790 MtrunA17_Chr3g0080861 43.137 102 57 1 194 294 37 138 4.46e-23 101
MsaG002790 MtrunA17_Chr4g0058631 43.137 102 57 1 194 294 12 113 4.47e-23 99.8
MsaG002790 MtrunA17_Chr6g0480581 40.984 122 69 1 196 317 4 122 4.58e-23 97.4
MsaG002790 MtrunA17_Chr6g0460661 41.964 112 60 1 187 293 2 113 5.54e-23 94.7
MsaG002790 MtrunA17_Chr7g0275911 44.444 99 54 1 194 291 12 110 8.42e-23 97.1
MsaG002790 MtrunA17_Chr1g0194291 40.708 113 66 1 180 291 7 119 1.15e-22 96.7
MsaG002790 MtrunA17_Chr4g0044421 46.078 102 50 2 196 294 14 113 1.23e-22 94.7
MsaG002790 MtrunA17_Chr5g0416341 42.975 121 64 2 176 291 1 121 1.28e-22 99.8
MsaG002790 MtrunA17_Chr1g0187761 38.793 116 69 2 194 307 12 127 1.75e-22 95.9
MsaG002790 MtrunA17_Chr7g0228231 44.000 100 55 1 193 291 13 112 1.77e-22 94.7
MsaG002790 MtrunA17_Chr3g0103281 44.000 100 55 1 193 291 11 110 2.51e-22 97.1
MsaG002790 MtrunA17_Chr7g0261281 43.434 99 55 1 194 291 12 110 2.71e-22 95.9
MsaG002790 MtrunA17_Chr6g0460671 47.872 94 49 0 196 289 99 192 3.90e-22 97.1
MsaG002790 MtrunA17_Chr1g0203411 43.434 99 55 1 194 291 12 110 4.58e-22 95.5
MsaG002790 MtrunA17_Chr4g0057031 42.424 99 56 1 194 291 12 110 4.79e-22 95.1
MsaG002790 MtrunA17_Chr7g0240821 37.857 140 71 3 199 336 6 131 5.79e-22 94.0
MsaG002790 MtrunA17_Chr1g0167691 42.424 99 56 1 194 291 12 110 6.19e-22 94.4
MsaG002790 MtrunA17_Chr4g0070641 44.444 99 54 1 194 291 12 110 6.43e-22 92.0
MsaG002790 MtrunA17_Chr4g0070611 44.444 99 54 1 194 291 12 110 6.47e-22 95.5
MsaG002790 MtrunA17_Chr6g0450101 38.017 121 73 2 194 312 14 134 6.87e-22 93.2
MsaG002790 MtrunA17_Chr5g0440781 42.056 107 60 2 192 296 10 116 8.12e-22 92.4
MsaG002790 MtrunA17_Chr5g0440761 42.056 107 60 2 192 296 10 116 1.13e-21 94.0
MsaG002790 MtrunA17_Chr1g0186061 41.176 102 59 1 191 291 17 118 1.15e-21 93.6
MsaG002790 MtrunA17_Chr8g0334881 43.243 111 61 2 188 296 4 114 1.22e-21 94.7
MsaG002790 MtrunA17_Chr5g0441141 42.056 107 60 2 192 296 10 116 1.25e-21 94.0
MsaG002790 MtrunA17_Chr8g0362231 39.394 132 74 2 183 308 5 136 1.54e-21 96.3
MsaG002790 MtrunA17_Chr1g0168661 38.843 121 68 2 191 305 18 138 1.80e-21 93.2
MsaG002790 MtrunA17_Chr7g0254261 51.064 94 46 0 196 289 89 182 1.98e-21 94.7
MsaG002790 MtrunA17_Chr4g0042671 34.559 136 82 2 194 322 12 147 1.99e-21 95.5
MsaG002790 MtrunA17_Chr4g0022881 40.816 98 57 1 195 291 13 110 2.06e-21 92.4
MsaG002790 MtrunA17_Chr1g0180391 43.000 100 56 1 193 291 18 117 2.10e-21 92.4
MsaG002790 MtrunA17_Chr1g0209661 41.000 100 58 1 191 289 24 123 2.82e-21 93.6
MsaG002790 MtrunA17_Chr1g0151941 42.308 104 58 2 190 291 8 111 3.86e-21 92.0
MsaG002790 MtrunA17_Chr7g0228991 43.434 99 55 1 194 291 29 127 4.85e-21 92.4
MsaG002790 MtrunA17_Chr3g0110351 40.777 103 60 1 190 291 8 110 5.22e-21 92.8
MsaG002790 MtrunA17_Chr5g0434571 40.777 103 60 1 190 291 44 146 5.26e-21 93.6
MsaG002790 MtrunA17_Chr3g0125801 48.936 94 48 0 196 289 16 109 6.67e-21 92.4
MsaG002790 MtrunA17_Chr7g0217741 42.424 99 56 1 194 291 12 110 7.18e-21 92.4
MsaG002790 MtrunA17_Chr3g0104491 49.398 83 38 1 246 324 17 99 7.68e-21 92.0
MsaG002790 MtrunA17_Chr5g0434931 42.157 102 58 1 194 294 35 136 8.06e-21 92.0
MsaG002790 MtrunA17_Chr5g0434911 39.831 118 67 2 178 294 8 122 9.67e-21 91.7
MsaG002790 MtrunA17_Chr4g0030881 40.000 115 61 1 195 301 8 122 1.45e-20 90.5
MsaG002790 MtrunA17_Chr7g0220341 41.905 105 58 1 190 291 21 125 1.66e-20 90.9
MsaG002790 MtrunA17_Chr5g0434841 41.026 117 63 2 179 294 10 121 1.97e-20 91.3
MsaG002790 MtrunA17_Chr2g0311221 40.777 103 60 1 190 291 10 112 2.08e-20 91.7
MsaG002790 MtrunA17_Chr7g0217221 40.777 103 60 1 190 291 8 110 2.49e-20 90.1
MsaG002790 MtrunA17_Chr4g0068061 33.974 156 83 3 194 329 12 167 2.80e-20 91.3
MsaG002790 MtrunA17_Chr6g0453471 42.424 99 56 1 194 291 12 110 2.90e-20 91.7
MsaG002790 MtrunA17_Chr2g0327351 37.500 120 73 2 190 307 8 127 3.66e-20 90.5
MsaG002790 MtrunA17_Chr5g0441131 41.346 104 59 2 193 294 8 111 4.83e-20 87.4
MsaG002790 MtrunA17_Chr5g0417821 42.857 98 55 1 194 290 7 104 5.17e-20 89.7
MsaG002790 MtrunA17_Chr4g0028311 31.765 170 104 5 190 347 8 177 8.30e-20 89.7
MsaG002790 MtrunA17_Chr1g0192411 42.157 102 58 1 194 294 12 113 8.53e-20 90.9
MsaG002790 MtrunA17_Chr5g0400821 30.270 185 104 5 190 351 8 190 8.73e-20 89.4
MsaG002790 MtrunA17_Chr7g0247131 50.685 73 34 1 221 291 4 76 1.02e-19 88.6
MsaG002790 MtrunA17_Chr3g0121241 37.374 99 61 1 194 291 42 140 1.25e-19 89.0
MsaG002790 MtrunA17_Chr4g0060721 40.566 106 61 2 194 297 13 118 1.42e-19 89.4
MsaG002790 MtrunA17_Chr2g0327821 39.286 112 67 1 191 301 3 114 1.48e-19 87.4
MsaG002790 MtrunA17_Chr2g0322521 49.505 101 50 1 192 291 27 127 1.85e-19 89.7
MsaG002790 MtrunA17_Chr1g0194301 37.143 105 65 1 188 291 27 131 1.93e-19 87.8
MsaG002790 MtrunA17_Chr7g0228891 40.404 99 58 1 194 291 12 110 1.97e-19 87.8
MsaG002790 MtrunA17_Chr8g0360111 36.066 122 70 2 178 291 2 123 2.34e-19 87.4
MsaG002790 MtrunA17_Chr3g0099141 45.349 86 46 1 190 274 36 121 2.60e-19 84.0
MsaG002790 MtrunA17_Chr6g0453211 38.835 103 62 1 190 291 8 110 2.64e-19 88.2
MsaG002790 MtrunA17_Chr5g0434831 42.157 102 58 1 194 294 7 108 3.11e-19 85.1
MsaG002790 MtrunA17_Chr1g0203441 41.837 98 56 1 195 291 14 111 3.45e-19 87.0
MsaG002790 MtrunA17_Chr4g0072751 40.385 104 60 2 190 291 8 111 4.10e-19 88.2
MsaG002790 MtrunA17_Chr4g0054391 40.777 103 59 2 190 290 8 110 4.44e-19 87.0
MsaG002790 MtrunA17_Chr6g0470971 41.176 102 59 1 191 291 11 112 4.69e-19 86.7
MsaG002790 MtrunA17_Chr3g0092401 40.196 102 60 1 194 294 13 114 5.03e-19 87.4
MsaG002790 MtrunA17_Chr7g0254411 42.453 106 59 2 194 297 12 117 5.30e-19 87.4
MsaG002790 MtrunA17_Chr1g0152011 39.423 104 61 2 190 291 8 111 5.81e-19 87.4
MsaG002790 MtrunA17_Chr1g0194951 41.414 99 57 1 194 291 12 110 1.04e-18 87.0
MsaG002790 MtrunA17_Chr3g0135311 36.220 127 78 3 190 313 8 134 1.08e-18 86.7
MsaG002790 MtrunA17_Chr7g0264641 39.423 104 61 2 190 291 8 111 4.03e-18 84.0
MsaG002790 MtrunA17_Chr3g0104501 67.308 52 17 0 196 247 133 184 1.58e-17 80.5
MsaG002790 MtrunA17_Chr2g0293911 39.806 103 61 1 190 291 20 122 2.93e-17 82.4
MsaG002790 MtrunA17_Chr6g0487491 34.932 146 78 5 190 325 8 146 2.95e-17 81.3
MsaG002790 MtrunA17_Chr5g0421201 46.392 97 44 3 248 341 12 103 7.82e-17 78.2
MsaG002790 MtrunA17_Chr2g0323321 37.647 85 52 1 190 273 7 91 7.93e-17 76.3
MsaG002790 MtrunA17_Chr4g0068921 37.615 109 67 1 189 296 19 127 1.72e-16 77.4
MsaG002790 MtrunA17_Chr5g0434901 50.000 66 33 0 229 294 9 74 2.42e-16 74.7
MsaG002790 MtrunA17_Chr8g0342511 40.000 80 47 1 190 268 8 87 6.56e-16 73.2
MsaG002790 MtrunA17_Chr7g0269831 44.444 99 54 1 194 291 12 110 1.19e-15 77.8
MsaG002790 MtrunA17_Chr8g0342531 39.024 82 49 1 190 270 8 89 1.34e-15 74.3
MsaG002790 MtrunA17_Chr7g0229101 46.970 66 35 0 229 294 8 73 2.49e-14 71.6
MsaG002790 MtrunA17_Chr8g0342461 40.964 83 47 2 190 270 8 90 2.71e-14 69.7
MsaG002790 MtrunA17_Chr7g0238651 37.113 97 58 1 196 289 7 103 3.04e-14 73.6
MsaG002790 MtrunA17_Chr4g0042611 40.260 77 45 1 194 269 12 88 3.08e-14 68.2
MsaG002790 MtrunA17_Chr8g0342471 40.964 83 47 2 190 270 8 90 3.60e-14 69.3
MsaG002790 MtrunA17_Chr2g0294811 37.662 77 47 1 194 269 12 88 5.78e-13 65.5
MsaG002790 MtrunA17_Chr5g0395221 38.272 81 49 1 190 269 8 88 5.81e-13 64.3
MsaG002790 MtrunA17_Chr5g0425591 39.286 84 49 2 193 274 8 91 7.56e-13 64.3
MsaG002790 MtrunA17_Chr7g0229131 43.939 66 37 0 229 294 8 73 2.05e-12 65.1
MsaG002790 MtrunA17_Chr7g0274481 35.417 96 61 1 194 289 5 99 5.82e-12 67.8
MsaG002790 MtrunA17_Chr3g0093811 36.709 79 46 2 217 291 2 80 8.55e-12 65.5
MsaG002790 MtrunA17_Chr6g0483051 29.710 138 88 4 198 327 71 207 1.70e-11 66.2
MsaG002790 MtrunA17_Chr5g0397691 34.737 95 59 1 195 289 6 97 1.94e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG002790 AT5G40360.1 46.078 204 90 4 132 321 87 284 1.94e-48 169
MsaG002790 AT4G18770.1 59.231 130 52 1 191 320 212 340 1.06e-47 169
MsaG002790 AT3G27785.1 47.619 189 87 4 191 371 184 368 9.81e-46 164
MsaG002790 AT5G11050.1 55.147 136 61 0 169 304 78 213 8.28e-44 158
MsaG002790 AT5G58850.1 44.068 177 86 3 188 351 97 273 1.56e-42 155
MsaG002790 AT2G25230.1 47.020 151 78 2 191 340 21 170 1.35e-37 136
MsaG002790 AT5G40430.1 45.985 137 68 3 191 325 49 181 3.78e-33 125
MsaG002790 AT5G11510.3 53.846 104 47 1 196 298 81 184 4.00e-33 132
MsaG002790 AT5G11510.1 53.846 104 47 1 196 298 81 184 4.00e-33 132
MsaG002790 AT5G11510.4 53.846 104 47 1 196 298 81 184 4.00e-33 132
MsaG002790 AT5G11510.2 53.846 104 47 1 196 298 81 184 4.51e-33 132
MsaG002790 AT5G11510.5 53.846 104 47 1 196 298 81 184 4.77e-33 132
MsaG002790 AT5G02320.1 56.701 97 42 0 196 292 127 223 1.59e-31 126
MsaG002790 AT5G02320.2 56.701 97 42 0 196 292 127 223 1.59e-31 126
MsaG002790 AT3G09370.2 57.732 97 41 0 196 292 135 231 1.63e-31 126
MsaG002790 AT3G09370.1 57.732 97 41 0 196 292 130 226 1.84e-31 125
MsaG002790 AT5G02320.3 56.701 97 42 0 196 292 67 163 1.92e-31 125
MsaG002790 AT3G09370.3 57.732 97 41 0 196 292 143 239 2.47e-31 125
MsaG002790 AT4G32730.5 51.923 104 49 1 196 298 87 190 1.77e-30 124
MsaG002790 AT4G32730.4 51.923 104 49 1 196 298 87 190 1.77e-30 124
MsaG002790 AT4G32730.3 51.923 104 49 1 196 298 87 190 1.77e-30 124
MsaG002790 AT4G32730.2 51.923 104 49 1 196 298 87 190 1.77e-30 124
MsaG002790 AT4G32730.1 51.923 104 49 1 196 298 87 190 2.27e-30 124
MsaG002790 AT3G55730.1 53.535 99 46 0 196 294 56 154 1.22e-28 116
MsaG002790 AT3G09230.1 53.535 99 46 0 196 294 55 153 4.18e-28 114
MsaG002790 AT4G00540.2 53.398 103 45 2 193 292 100 202 9.77e-28 114
MsaG002790 AT4G00540.2 34.951 103 58 2 196 289 46 148 8.52e-11 63.9
MsaG002790 AT3G28470.1 45.631 103 55 1 190 291 8 110 1.19e-27 112
MsaG002790 AT4G00540.1 53.704 108 46 3 193 296 98 205 2.22e-27 113
MsaG002790 AT3G12720.1 41.606 137 74 3 176 306 1 137 2.78e-27 110
MsaG002790 AT3G11440.2 47.525 101 52 1 192 291 39 139 5.03e-27 112
MsaG002790 AT3G11440.3 47.525 101 52 1 192 291 39 139 1.50e-26 112
MsaG002790 AT3G11440.4 47.525 101 52 1 192 291 39 139 1.50e-26 112
MsaG002790 AT3G11440.1 47.525 101 52 1 192 291 39 139 1.50e-26 112
MsaG002790 AT3G13890.2 45.283 106 57 1 190 294 8 113 4.34e-26 108
MsaG002790 AT1G57560.2 36.310 168 85 4 194 354 12 164 6.79e-26 106
MsaG002790 AT3G13890.1 42.609 115 56 1 190 294 8 122 1.10e-25 107
MsaG002790 AT4G05100.1 44.860 107 58 1 189 294 8 114 1.49e-25 106
MsaG002790 AT4G28110.1 44.340 106 58 1 190 294 8 113 2.01e-25 105
MsaG002790 AT1G09540.1 40.559 143 76 4 194 335 12 146 2.21e-25 106
MsaG002790 AT2G26960.1 44.444 108 59 1 196 302 22 129 6.42e-25 106
MsaG002790 AT5G55020.1 45.192 104 56 1 194 296 26 129 7.29e-25 107
MsaG002790 AT1G57560.1 45.000 100 54 1 194 292 12 111 7.47e-25 104
MsaG002790 AT4G21440.1 47.059 102 53 1 194 294 12 113 7.49e-25 105
MsaG002790 AT5G52600.1 42.857 119 62 2 188 305 6 119 9.64e-25 101
MsaG002790 AT4G01680.3 39.130 138 76 3 194 330 12 142 1.16e-24 102
MsaG002790 AT1G69560.1 45.545 101 55 0 190 290 101 201 1.26e-24 103
MsaG002790 AT1G69560.2 45.545 101 55 0 190 290 117 217 1.29e-24 104
MsaG002790 AT4G01680.1 39.130 138 76 3 194 330 12 142 1.35e-24 103
MsaG002790 AT4G38620.1 35.088 171 92 5 196 356 14 175 1.39e-24 102
MsaG002790 AT3G53200.1 41.259 143 76 4 189 324 4 145 1.52e-24 101
MsaG002790 AT4G37260.1 48.958 96 49 0 196 291 13 108 1.65e-24 103
MsaG002790 AT3G61250.1 44.000 100 55 1 193 291 11 110 1.75e-24 102
MsaG002790 AT3G08500.1 45.283 106 57 1 190 294 26 131 1.99e-24 103
MsaG002790 AT5G06100.1 44.444 99 54 1 194 291 32 130 2.69e-24 104
MsaG002790 AT1G22640.1 44.444 108 58 2 191 296 9 116 2.86e-24 101
MsaG002790 AT5G26660.1 45.000 100 54 1 194 292 12 111 3.09e-24 103
MsaG002790 AT5G10280.1 43.689 103 57 1 190 291 8 110 3.25e-24 102
MsaG002790 AT5G16770.4 43.396 106 59 1 190 294 8 113 3.41e-24 102
MsaG002790 AT5G16770.3 43.396 106 59 1 190 294 8 113 3.41e-24 102
MsaG002790 AT5G16770.1 43.396 106 59 1 190 294 8 113 4.04e-24 102
MsaG002790 AT5G16770.2 43.396 106 59 1 190 294 8 113 4.04e-24 102
MsaG002790 AT1G63910.1 43.689 103 57 1 190 291 8 110 4.42e-24 103
MsaG002790 AT5G06100.5 44.444 99 54 1 194 291 32 130 5.40e-24 104
MsaG002790 AT5G06100.2 44.444 99 54 1 194 291 32 130 5.40e-24 104
MsaG002790 AT5G06100.3 44.444 99 54 1 194 291 32 130 5.40e-24 104
MsaG002790 AT5G06100.4 44.444 99 54 1 194 291 32 130 5.40e-24 104
MsaG002790 AT2G32460.1 46.465 99 52 1 194 291 18 116 6.19e-24 103
MsaG002790 AT2G32460.2 46.465 99 52 1 194 291 6 104 6.31e-24 103
MsaG002790 AT5G14750.1 45.918 98 52 1 195 291 17 114 6.63e-24 99.0
MsaG002790 AT4G01680.2 36.667 150 75 3 194 330 12 154 8.22e-24 102
MsaG002790 AT3G50060.1 35.484 155 79 3 196 350 6 139 8.69e-24 100
MsaG002790 AT5G65230.1 42.718 103 58 1 190 291 8 110 9.16e-24 101
MsaG002790 AT4G26930.1 45.455 99 53 1 194 291 19 117 1.19e-23 102
MsaG002790 AT2G39880.1 43.925 107 55 1 196 302 50 151 1.20e-23 101
MsaG002790 AT3G23250.1 41.803 122 67 3 194 311 12 133 1.42e-23 100
MsaG002790 AT1G17950.1 37.580 157 93 3 196 349 5 159 1.47e-23 99.4
MsaG002790 AT5G12870.1 41.525 118 67 2 176 292 1 117 1.50e-23 99.8
MsaG002790 AT1G26780.1 48.421 95 49 0 196 290 98 192 1.62e-23 99.8
MsaG002790 AT2G23290.1 48.958 96 49 0 196 291 13 108 2.41e-23 100
MsaG002790 AT2G47190.1 30.000 160 110 2 179 336 5 164 2.48e-23 99.0
MsaG002790 AT1G26780.2 48.421 95 49 0 196 290 98 192 2.70e-23 100
MsaG002790 AT4G17785.1 40.000 105 62 1 191 294 10 114 2.84e-23 100
MsaG002790 AT4G17785.2 40.000 105 62 1 191 294 10 114 2.87e-23 100
MsaG002790 AT3G02940.2 43.396 106 59 1 190 294 8 113 3.22e-23 99.8
MsaG002790 AT4G09460.1 46.602 103 53 2 196 296 14 116 3.86e-23 97.8
MsaG002790 AT5G40330.1 43.137 102 57 1 191 291 9 110 4.35e-23 97.1
MsaG002790 AT4G34990.1 37.241 145 83 3 196 339 14 151 4.76e-23 98.2
MsaG002790 AT3G02940.1 43.396 106 59 1 190 294 8 113 4.98e-23 99.4
MsaG002790 AT3G02940.3 43.396 106 59 1 190 294 8 113 4.98e-23 99.4
MsaG002790 AT4G33450.1 47.368 95 50 0 193 287 16 110 5.36e-23 97.8
MsaG002790 AT1G34670.1 42.718 103 58 1 190 291 8 110 7.95e-23 99.4
MsaG002790 AT3G30210.1 36.129 155 91 2 178 331 11 158 8.41e-23 97.8
MsaG002790 AT3G29020.1 47.368 95 50 0 196 290 65 159 8.61e-23 96.7
MsaG002790 AT3G27810.1 44.118 102 56 1 191 291 17 118 9.79e-23 96.3
MsaG002790 AT3G29020.2 47.368 95 50 0 196 290 67 161 1.02e-22 98.2
MsaG002790 AT3G01530.1 42.857 105 59 1 188 291 19 123 1.03e-22 95.9
MsaG002790 AT5G67300.1 48.958 96 49 0 196 291 6 101 1.06e-22 98.2
MsaG002790 AT4G12350.1 42.424 99 56 1 194 291 12 110 1.08e-22 97.8
MsaG002790 AT5G56110.1 45.098 102 55 1 191 291 9 110 1.08e-22 98.2
MsaG002790 AT5G60890.1 47.059 102 53 1 191 291 9 110 1.45e-22 97.4
MsaG002790 AT3G27920.1 43.878 98 54 1 195 291 15 112 2.09e-22 95.5
MsaG002790 AT2G02820.1 44.954 109 57 2 199 304 33 141 2.17e-22 99.4
MsaG002790 AT2G16720.1 37.580 157 81 6 196 348 14 157 2.25e-22 96.3
MsaG002790 AT2G02820.2 44.954 109 57 2 199 304 33 141 2.52e-22 99.4
MsaG002790 AT2G02820.3 44.954 109 57 2 199 304 33 141 3.20e-22 97.1
MsaG002790 AT1G16490.1 38.129 139 78 3 190 325 10 143 3.41e-22 95.9
MsaG002790 AT4G22680.1 43.434 99 55 1 194 291 12 110 3.52e-22 95.9
MsaG002790 AT1G18570.1 45.098 102 55 1 191 291 10 111 3.66e-22 97.4
MsaG002790 AT1G74430.1 41.284 109 63 1 193 300 11 119 4.39e-22 95.5
MsaG002790 AT5G54230.1 44.444 99 54 1 194 291 12 110 5.42e-22 96.3
MsaG002790 AT5G57620.1 41.803 122 67 3 190 307 8 129 5.66e-22 96.7
MsaG002790 AT1G35515.1 40.741 108 62 2 191 296 9 116 7.16e-22 93.6
MsaG002790 AT5G62320.1 43.103 116 57 3 190 296 9 124 1.10e-21 94.0
MsaG002790 AT3G13540.1 29.947 187 119 3 178 361 7 184 1.28e-21 94.0
MsaG002790 AT5G40350.1 42.157 102 58 1 191 291 14 115 1.50e-21 92.8
MsaG002790 AT1G06180.1 38.596 114 68 2 194 305 12 125 2.21e-21 93.2
MsaG002790 AT5G17800.1 46.809 94 50 0 196 289 93 186 2.76e-21 94.4
MsaG002790 AT1G56160.1 39.806 103 61 1 190 291 10 112 2.91e-21 94.0
MsaG002790 AT1G14350.2 44.086 93 52 0 199 291 28 120 4.15e-21 95.1
MsaG002790 AT1G14350.1 44.086 93 52 0 199 291 28 120 4.15e-21 95.1
MsaG002790 AT3G24310.1 41.176 102 59 1 191 291 15 116 4.68e-21 92.8
MsaG002790 AT2G31180.1 41.414 99 57 1 194 291 12 110 5.67e-21 92.0
MsaG002790 AT3G46130.1 41.026 117 67 2 186 301 2 117 7.25e-21 92.0
MsaG002790 AT5G35550.1 41.739 115 63 2 194 304 14 128 9.45e-21 91.7
MsaG002790 AT5G59780.3 40.741 108 63 1 195 301 9 116 1.38e-20 90.5
MsaG002790 AT4G13480.1 38.333 120 70 2 191 309 3 119 1.74e-20 90.9
MsaG002790 AT5G65790.1 41.379 116 64 3 190 301 8 123 1.96e-20 92.8
MsaG002790 AT1G66230.1 42.000 100 55 2 194 291 12 110 2.01e-20 91.3
MsaG002790 AT5G62470.1 40.816 98 58 0 194 291 12 109 2.07e-20 92.4
MsaG002790 AT3G60460.1 41.228 114 65 2 185 296 2 115 2.33e-20 91.3
MsaG002790 AT1G68320.1 39.394 99 59 1 194 291 19 117 2.71e-20 90.9
MsaG002790 AT5G07690.1 43.269 104 58 1 194 296 12 115 2.85e-20 91.7
MsaG002790 AT1G74080.1 42.424 99 56 1 194 291 12 110 2.88e-20 91.7
MsaG002790 AT5G07700.1 45.455 99 53 1 194 291 12 110 3.86e-20 91.3
MsaG002790 AT5G07700.2 45.455 99 53 1 194 291 12 110 3.86e-20 91.3
MsaG002790 AT1G25340.2 33.108 148 90 3 195 337 19 162 7.07e-20 89.4
MsaG002790 AT1G25340.1 41.837 98 56 1 195 291 19 116 7.36e-20 89.4
MsaG002790 AT3G01140.2 34.752 141 80 3 190 327 8 139 8.74e-20 90.5
MsaG002790 AT5G15310.4 40.404 99 58 1 194 291 12 110 1.17e-19 88.2
MsaG002790 AT3G01140.1 34.752 141 80 3 190 327 51 182 1.18e-19 90.5
MsaG002790 AT5G49330.1 41.414 99 57 1 194 291 12 110 1.24e-19 89.7
MsaG002790 AT3G49690.1 39.655 116 66 3 190 301 8 123 1.36e-19 89.4
MsaG002790 AT1G48000.1 42.424 99 56 1 194 291 32 130 1.41e-19 87.8
MsaG002790 AT1G25340.3 42.268 97 52 1 195 291 19 111 1.45e-19 89.0
MsaG002790 AT5G61420.2 43.434 99 55 1 194 291 12 110 1.51e-19 90.1
MsaG002790 AT5G15310.1 40.404 99 58 1 194 291 12 110 1.67e-19 89.4
MsaG002790 AT2G47460.1 35.766 137 71 3 194 329 12 132 1.83e-19 89.7
MsaG002790 AT4G37780.1 34.646 127 73 3 194 318 12 130 1.88e-19 89.0
MsaG002790 AT5G15310.2 40.000 100 59 1 193 291 11 110 1.90e-19 89.0
MsaG002790 AT1G73410.2 44.444 108 59 1 196 302 6 113 1.99e-19 86.7
MsaG002790 AT1G79180.1 28.947 190 127 5 190 372 10 198 2.10e-19 88.6
MsaG002790 AT3G47600.1 35.664 143 82 3 194 335 12 145 2.12e-19 89.0
MsaG002790 AT1G73410.1 44.444 108 59 1 196 302 6 113 2.19e-19 87.4
MsaG002790 AT3G48920.1 40.678 118 66 3 176 291 1 116 2.33e-19 87.8
MsaG002790 AT1G66370.1 41.414 99 57 1 194 291 8 106 3.81e-19 86.7
MsaG002790 AT5G16600.1 43.000 100 54 2 194 291 12 110 4.44e-19 88.2
MsaG002790 AT5G23000.1 40.187 107 62 2 190 294 8 114 4.87e-19 87.8
MsaG002790 AT1G74650.1 41.414 99 57 1 194 291 12 110 5.31e-19 87.8
MsaG002790 AT5G62470.2 40.404 99 58 1 194 291 12 110 6.00e-19 88.2
MsaG002790 AT5G26660.2 51.515 66 32 0 229 294 17 82 6.10e-19 87.4
MsaG002790 AT1G08810.1 40.517 116 67 2 194 307 12 127 6.68e-19 86.7
MsaG002790 AT3G53200.2 45.545 101 50 2 229 324 12 112 7.09e-19 85.1
MsaG002790 AT3G62610.1 41.414 99 57 1 194 291 12 110 8.67e-19 87.4
MsaG002790 AT3G28910.1 39.091 110 65 2 190 297 8 117 1.15e-18 86.7
MsaG002790 AT3G12820.1 37.864 103 63 1 190 291 10 112 1.61e-18 84.7
MsaG002790 AT5G39700.1 38.053 113 66 1 179 291 43 151 2.72e-18 82.8
MsaG002790 AT5G14340.1 34.228 149 88 5 179 325 9 149 3.03e-18 84.7
MsaG002790 AT2G26950.1 34.821 112 64 2 196 302 18 125 3.09e-18 86.3
MsaG002790 AT5G14750.3 50.794 63 31 0 229 291 18 80 4.05e-18 82.0
MsaG002790 AT4G25560.1 42.857 98 55 1 195 291 11 108 4.18e-18 84.3
MsaG002790 AT1G18710.1 32.168 143 81 3 194 335 12 139 5.40e-18 84.0
MsaG002790 AT2G36890.1 37.931 116 69 3 190 302 8 123 1.18e-17 83.6
MsaG002790 AT5G35550.2 48.101 79 38 1 229 304 53 131 1.65e-17 82.4
MsaG002790 AT2G36890.2 37.931 116 69 3 190 302 49 164 2.05e-17 83.2
MsaG002790 AT1G66380.1 40.566 106 62 1 187 291 1 106 2.18e-17 79.0
MsaG002790 AT5G52260.1 43.878 98 54 1 195 291 13 110 2.55e-17 82.0
MsaG002790 AT5G49620.1 36.885 122 73 2 174 291 3 124 1.02e-16 80.9
MsaG002790 AT1G66390.1 41.509 106 61 1 187 291 1 106 3.17e-16 78.6
MsaG002790 AT1G56650.1 39.623 106 63 1 187 291 1 106 3.21e-16 78.2
MsaG002790 AT3G27810.2 49.206 63 32 0 229 291 7 69 6.98e-16 75.9
MsaG002790 AT3G06490.1 37.255 102 63 1 189 289 14 115 9.20e-16 78.2
MsaG002790 AT1G79180.2 31.618 136 59 3 190 291 10 145 1.29e-15 77.8
MsaG002790 AT3G18100.1 40.000 95 57 0 195 289 545 639 1.68e-15 79.3
MsaG002790 AT3G18100.1 35.714 98 61 2 193 289 492 588 2.82e-13 72.4
MsaG002790 AT3G18100.3 40.000 95 57 0 195 289 497 591 1.93e-15 79.0
MsaG002790 AT3G18100.3 35.714 98 61 2 193 289 444 540 3.46e-13 72.0
MsaG002790 AT3G18100.4 40.000 95 57 0 195 289 384 478 2.30e-15 78.6
MsaG002790 AT3G18100.4 35.714 98 61 2 193 289 331 427 4.33e-13 71.6
MsaG002790 AT3G18100.2 40.000 95 57 0 195 289 332 426 2.92e-15 78.2
MsaG002790 AT3G18100.2 35.714 98 61 2 193 289 279 375 5.62e-13 71.2
MsaG002790 AT5G40350.2 47.619 63 33 0 229 291 8 70 3.61e-15 73.6
MsaG002790 AT3G12820.2 47.619 63 33 0 229 291 2 64 1.45e-14 72.4
MsaG002790 AT5G59780.2 42.466 73 42 0 229 301 23 95 1.70e-14 72.8
MsaG002790 AT3G46130.3 42.466 73 42 0 229 301 13 85 4.42e-14 71.6
MsaG002790 AT3G46130.4 42.466 73 42 0 229 301 23 95 4.63e-14 72.0
MsaG002790 AT3G47600.2 36.792 106 58 2 229 334 42 138 1.22e-13 72.0
MsaG002790 AT1G22640.3 42.683 82 36 2 240 319 2 74 1.91e-13 69.3
MsaG002790 AT5G49620.2 33.088 136 73 3 174 291 3 138 2.01e-13 71.2
MsaG002790 AT2G37630.1 37.113 97 58 1 196 289 4 100 7.39e-13 70.1
MsaG002790 AT1G71030.2 42.424 66 37 1 232 296 5 70 2.10e-12 65.9
MsaG002790 AT1G71030.1 42.424 66 37 1 232 296 19 84 2.45e-12 65.9
MsaG002790 AT5G14750.4 48.077 52 27 0 240 291 2 53 2.59e-12 64.7
MsaG002790 AT5G14750.2 48.077 52 27 0 240 291 2 53 2.59e-12 64.7
MsaG002790 AT3G23250.2 42.667 75 40 2 240 311 2 76 4.30e-12 65.9
MsaG002790 AT1G66380.3 50.794 63 31 0 229 291 11 73 1.20e-11 61.6
MsaG002790 AT1G09770.1 35.417 96 61 1 194 289 5 99 1.35e-11 67.0
MsaG002790 AT1G14350.3 49.091 55 28 0 237 291 23 77 1.36e-11 66.2
MsaG002790 AT1G14350.4 49.091 55 28 0 237 291 23 77 1.36e-11 66.2

Find 101 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTATATTGATTGGATTTA+TGG 0.069076 1:-47581628 None:intergenic
AATAGATAAGGAATTCTTTC+TGG 0.120943 1:-47581494 None:intergenic
TAACATGGACATAGGAATTT+TGG 0.130823 1:+47581844 MsaT002790.1:CDS
GTCAAACTGTTGGACTATTC+TGG 0.139117 1:+47582296 MsaT002790.1:CDS
CTACCACCATCACTAGTTTA+TGG 0.185898 1:+47581929 MsaT002790.1:CDS
TATAACGAACATCCTCTTAA+TGG 0.242646 1:+47581644 MsaT002790.1:CDS
TTTCCTTGATCATGGTCTTC+TGG 0.267693 1:-47581959 None:intergenic
TCGGCTTCTTTGTAGCATTC+AGG 0.284488 1:-47583555 None:intergenic
AAACAAAATTTCTTTCAATA+TGG 0.288585 1:+47581875 MsaT002790.1:CDS
AGGGTTTGGTTCATTGAAAA+TGG 0.300005 1:-47581710 None:intergenic
ACTATTCTGGGTTTAATAAC+TGG 0.310513 1:+47582309 MsaT002790.1:CDS
ATAACGAACATCCTCTTAAT+GGG 0.328090 1:+47581645 MsaT002790.1:CDS
CCATCTTCGACCGGACATTA+AGG 0.328539 1:+47582394 MsaT002790.1:CDS
AGGATGTTCGTTATATTGAT+TGG 0.335140 1:-47581636 None:intergenic
CAACGAAATCACTAATTCTA+AGG 0.335193 1:+47583621 MsaT002790.1:CDS
TCAAACTGTTGGACTATTCT+GGG 0.337928 1:+47582297 MsaT002790.1:CDS
GGAATTCTTTCTGGAAAACT+TGG 0.361080 1:-47581485 None:intergenic
TTCGAACTATTTCGCCGGTT+CGG 0.368111 1:-47583574 None:intergenic
CAGTCGTGTGCGAAAGGGTT+TGG 0.371106 1:-47581724 None:intergenic
GCTTCCATTTCGTTATAGTT+TGG 0.371231 1:-47581806 None:intergenic
GAAATTGCAAAGAGACTTCC+TGG 0.380134 1:+47583484 MsaT002790.1:CDS
TAGTTTGGTGTAAAGGTCAT+TGG 0.380184 1:-47581791 None:intergenic
GAGTGTGGTGTTAACTTTGA+AGG 0.386575 1:+47583757 MsaT002790.1:CDS
TTCGTTATAGTTTGGTGTAA+AGG 0.392484 1:-47581798 None:intergenic
GTTCATTGAAAATGGTTTGA+TGG 0.394706 1:-47581702 None:intergenic
CTTGATCATGGTCTTCTGGT+TGG 0.397795 1:-47581955 None:intergenic
AGAACCAGTGCGGGGATCTC+TGG 0.402224 1:-47581548 None:intergenic
ATCGAAGCTCACAAGATAGT+TGG 0.429234 1:+47583448 MsaT002790.1:CDS
GATGGAATGGCAAGTGGCTC+TGG 0.433866 1:+47583838 MsaT002790.1:CDS
TGGTGTTAACTTTGAAGGTT+TGG 0.435659 1:+47583762 MsaT002790.1:CDS
GGTGAACCATCACACTTCTA+TGG 0.445255 1:+47581667 MsaT002790.1:CDS
CTCAATGTTCATTATGTTGG+TGG 0.446836 1:-47583668 None:intergenic
TGAGAATGTTTCCTTGATCA+TGG 0.451402 1:-47581967 None:intergenic
TACACCAAACTATAACGAAA+TGG 0.464173 1:+47581802 MsaT002790.1:CDS
CAGATTGCTAAGTTTATGAA+TGG 0.467433 1:+47582335 MsaT002790.1:CDS
AAATTCCTATGTCCATGTTA+AGG 0.475533 1:-47581841 None:intergenic
ACTAAGACCAGGGTTGGTAT+AGG 0.478065 1:-47583713 None:intergenic
TAGGATTCTTGTCAAACTGT+TGG 0.478494 1:+47582286 MsaT002790.1:intron
AATGAATCCAATATAAGAAA+AGG 0.480353 1:+47582040 MsaT002790.1:CDS
CCAATATAAGAAAAGGTCAA+TGG 0.487634 1:+47582047 MsaT002790.1:CDS
TGACCAGATGCGACAAAAGA+AGG 0.489767 1:+47581991 MsaT002790.1:CDS
GGCACAATGAGTCATGAGAT+TGG 0.496501 1:+47583859 MsaT002790.1:CDS
AAATTCTCTATGGGTTCCAT+TGG 0.498917 1:-47581753 None:intergenic
GTTACTTCAGTGGAAGAACT+TGG 0.499219 1:+47583784 MsaT002790.1:CDS
ATACTCAATGTTCATTATGT+TGG 0.501812 1:-47583671 None:intergenic
ATGCTACAAAGAAGCCGAAC+CGG 0.502022 1:+47583560 MsaT002790.1:CDS
TGAGATTGGATCGTATCAAA+TGG 0.502967 1:+47583873 MsaT002790.1:CDS
TGATGGTTCACCCCATTAAG+AGG 0.503375 1:-47581656 None:intergenic
AGCATTCAGGCTGCGCTTAG+CGG 0.505773 1:-47583542 None:intergenic
GCCGAAGCGGAAAACAGTGC+AGG 0.515267 1:+47582357 MsaT002790.1:CDS
GGAGTTCCAACGGTTCTTGA+CGG 0.518211 1:-47583521 None:intergenic
TCGAAGCTCACAAGATAGTT+GGG 0.518710 1:+47583449 MsaT002790.1:CDS
CAATGGACTCGTGATGAGGA+TGG 0.520815 1:+47582064 MsaT002790.1:CDS
GAAAATGGTTTGATGGAGGA+AGG 0.521740 1:-47581695 None:intergenic
TGCGCTTAGCGGAGTTCCAA+CGG 0.521912 1:-47583531 None:intergenic
CCTTAATGTCCGGTCGAAGA+TGG 0.524062 1:-47582394 None:intergenic
GGTTGCAAGAGAACCAGTGC+GGG 0.524586 1:-47581557 None:intergenic
CATTGAAAATGGTTTGATGG+AGG 0.532229 1:-47581699 None:intergenic
ATGATGTTGAATGGTGATGA+TGG 0.534000 1:+47583820 MsaT002790.1:CDS
GAAAACAGTGCAGGGAGAGA+TGG 0.549730 1:+47582366 MsaT002790.1:CDS
CAACCAGAAGACCATGATCA+AGG 0.554133 1:+47581956 MsaT002790.1:CDS
TGTTTGCAGTCGTGTGCGAA+AGG 0.558637 1:-47581730 None:intergenic
CACACGACTGCAAACACCAA+TGG 0.561905 1:+47581737 MsaT002790.1:CDS
TTCCTTTCGAACTATTTCGC+CGG 0.564862 1:-47583579 None:intergenic
GTTTGCAGTCGTGTGCGAAA+GGG 0.565317 1:-47581729 None:intergenic
TGAAGGTTTGGTTACTTCAG+TGG 0.567178 1:+47583774 MsaT002790.1:CDS
AACATCACTAAGACCAGGGT+TGG 0.571044 1:-47583719 None:intergenic
ACGGAGTTCTCAGTACGTCC+AGG 0.575760 1:-47583502 None:intergenic
AATGGACTCGTGATGAGGAT+GGG 0.581381 1:+47582065 MsaT002790.1:CDS
AACTAGTGATGGTGGTAGAG+AGG 0.582236 1:-47581924 None:intergenic
GAAAGAGTCATGGAGTGAAG+AGG 0.588469 1:+47583411 MsaT002790.1:intron
AATGTGACAATGATGTTGAA+TGG 0.588727 1:+47583811 MsaT002790.1:CDS
AAAACCAGAGATCCCCGCAC+TGG 0.593457 1:+47581544 MsaT002790.1:CDS
AGAACTCCGTCAAGAACCGT+TGG 0.593655 1:+47583515 MsaT002790.1:CDS
CCGAAGCGGAAAACAGTGCA+GGG 0.593981 1:+47582358 MsaT002790.1:CDS
TCAGTGTAATTAGATGGTGC+AGG 0.594633 1:-47581596 None:intergenic
AACCGGCGAAATAGTTCGAA+AGG 0.596875 1:+47583577 MsaT002790.1:CDS
TAATTCTAAGGATGTTCAGA+AGG 0.597329 1:+47583633 MsaT002790.1:CDS
CATGTTAAGGAGGTCATGCA+TGG 0.599427 1:-47581828 None:intergenic
GACAATACCTATACCAACCC+TGG 0.599796 1:+47583706 MsaT002790.1:CDS
TGGTTTCCATAAACTAGTGA+TGG 0.599953 1:-47581935 None:intergenic
GTTGAATGGTGATGATGGAA+TGG 0.601518 1:+47583825 MsaT002790.1:CDS
ATCGAACATCACTAAGACCA+GGG 0.610910 1:-47583723 None:intergenic
ATGGCATAACCATCTTCGAC+CGG 0.615742 1:+47582385 MsaT002790.1:CDS
GACCTCCTTAACATGGACAT+AGG 0.621780 1:+47581836 MsaT002790.1:CDS
TTTCCATAAACTAGTGATGG+TGG 0.621844 1:-47581932 None:intergenic
TTCCTATGTCCATGTTAAGG+AGG 0.622164 1:-47581838 None:intergenic
GAACTACCATAGAAGTGTGA+TGG 0.625518 1:-47581673 None:intergenic
CATGCATGACCTCCTTAACA+TGG 0.627928 1:+47581829 MsaT002790.1:CDS
ACTTCAGTGGAAGAACTTGG+TGG 0.628454 1:+47583787 MsaT002790.1:CDS
TATCGAACATCACTAAGACC+AGG 0.629276 1:-47583724 None:intergenic
CGATATGAAATTTCAGAGTG+TGG 0.631414 1:+47583742 MsaT002790.1:CDS
AAGTTTATGAATGGCCGAAG+CGG 0.631652 1:+47582344 MsaT002790.1:CDS
AGGTCAATGGACTCGTGATG+AGG 0.637245 1:+47582060 MsaT002790.1:CDS
TATTAATCTAGAAAGAGTCA+TGG 0.641211 1:+47583401 MsaT002790.1:intron
TTCTATAGATCACTAACATG+AGG 0.655218 1:-47583904 None:intergenic
TAACGAACATCCTCTTAATG+GGG 0.668773 1:+47581646 MsaT002790.1:CDS
GGTGATGATGGAATGGCAAG+TGG 0.670002 1:+47583832 MsaT002790.1:CDS
GCAGGTGTAAGAGTAGAACT+TGG 0.695950 1:-47581578 None:intergenic
TGGTTGCAAGAGAACCAGTG+CGG 0.712881 1:-47581558 None:intergenic
GTTGCAAGAGAACCAGTGCG+GGG 0.724060 1:-47581556 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 47581473 47583924 47581473 ID=MsaG002790
Chr1 mRNA 47581473 47583924 47581473 ID=MsaT002790.1;Parent=MsaG002790
Chr1 exon 47581473 47582086 47581473 ID=MsaT002790.1.exon1;Parent=MsaT002790.1
Chr1 CDS 47581473 47582086 47581473 ID=cds.MsaT002790.1;Parent=MsaT002790.1
Chr1 exon 47582289 47582415 47582289 ID=MsaT002790.1.exon2;Parent=MsaT002790.1
Chr1 CDS 47582289 47582415 47582289 ID=cds.MsaT002790.1;Parent=MsaT002790.1
Chr1 exon 47583412 47583924 47583412 ID=MsaT002790.1.exon3;Parent=MsaT002790.1
Chr1 CDS 47583412 47583924 47583412 ID=cds.MsaT002790.1;Parent=MsaT002790.1
Gene Sequence

>MsaT002790.1

ATGGAATTAGATCCAAGTTTTCCAGAAAGAATTCCTTATCTATTTGAAAATTTTCCTAAAATTCCTCTAGAAAAACCAGAGATCCCCGCACTGGTTCTCTTGCAACCAAGTTCTACTCTTACACCTGCACCATCTAATTACACTGATTTTTTGTACCATAAATCCAATCAATATAACGAACATCCTCTTAATGGGGTGAACCATCACACTTCTATGGTAGTTCCTTCCTCCATCAAACCATTTTCAATGAACCAAACCCTTTCGCACACGACTGCAAACACCAATGGAACCCATAGAGAATTTTTCATCGATCAAAATCCAATGACCTTTACACCAAACTATAACGAAATGGAAGCCATGCATGACCTCCTTAACATGGACATAGGAATTTTGGATTTGTCCAAACAAAATTTCTTTCAATATGGTGAAACTTCACAATCTCGAGTAATTTCCTCTCTACCACCATCACTAGTTTATGGAAACCAACCAGAAGACCATGATCAAGGAAACATTCTCATTGACCAGATGCGACAAAAGAAGGTTCACAAAGACAAAGAAATTCAACAAAATGAATCCAATATAAGAAAAGGTCAATGGACTCGTGATGAGGATGGGATTCTTGTCAAACTGTTGGACTATTCTGGGTTTAATAACTGGTCTCAGATTGCTAAGTTTATGAATGGCCGAAGCGGAAAACAGTGCAGGGAGAGATGGCATAACCATCTTCGACCGGACATTAAGAAAGAGTCATGGAGTGAAGAGGAAGATAGAATATTGATCGAAGCTCACAAGATAGTTGGGAACAAGTTTGCTGAAATTGCAAAGAGACTTCCTGGACGTACTGAGAACTCCGTCAAGAACCGTTGGAACTCCGCTAAGCGCAGCCTGAATGCTACAAAGAAGCCGAACCGGCGAAATAGTTCGAAAGGAACACTACTTCATAAATACATCAACGAAATCACTAATTCTAAGGATGTTCAGAAGGTGCCAAAAAATTCCACCAACATAATGAACATTGAGTATCAGACAAATTTCGACAATACCTATACCAACCCTGGTCTTAGTGATGTTCGATATGAAATTTCAGAGTGTGGTGTTAACTTTGAAGGTTTGGTTACTTCAGTGGAAGAACTTGGTGGCAATGTGACAATGATGTTGAATGGTGATGATGGAATGGCAAGTGGCTCTGGCACAATGAGTCATGAGATTGGATCGTATCAAATGGAGTTTTTTCCTCATGTTAGTGATCTATAG

Protein sequence

>MsaT002790.1

MELDPSFPERIPYLFENFPKIPLEKPEIPALVLLQPSSTLTPAPSNYTDFLYHKSNQYNEHPLNGVNHHTSMVVPSSIKPFSMNQTLSHTTANTNGTHREFFIDQNPMTFTPNYNEMEAMHDLLNMDIGILDLSKQNFFQYGETSQSRVISSLPPSLVYGNQPEDHDQGNILIDQMRQKKVHKDKEIQQNESNIRKGQWTRDEDGILVKLLDYSGFNNWSQIAKFMNGRSGKQCRERWHNHLRPDIKKESWSEEEDRILIEAHKIVGNKFAEIAKRLPGRTENSVKNRWNSAKRSLNATKKPNRRNSSKGTLLHKYINEITNSKDVQKVPKNSTNIMNIEYQTNFDNTYTNPGLSDVRYEISECGVNFEGLVTSVEELGGNVTMMLNGDDGMASGSGTMSHEIGSYQMEFFPHVSDL*