AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG002883

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG002883 MtrunA17_Chr1g0179101 97.674 860 18 2 1 859 1 859 0.0 1712
MsaG002883 MtrunA17_Chr7g0266031 70.362 884 229 15 1 859 1 876 0.0 1159
MsaG002883 MtrunA17_Chr3g0080101 69.892 465 133 4 398 859 342 802 0.0 661
MsaG002883 MtrunA17_Chr3g0080101 42.568 148 69 3 1 148 1 132 2.01e-22 103
MsaG002883 MtrunA17_Chr2g0290691 63.946 441 153 5 393 827 127 567 0.0 586
MsaG002883 MtrunA17_Chr8g0335351 58.599 471 169 9 368 820 258 720 0.0 550
MsaG002883 MtrunA17_Chr7g0250631 58.898 472 172 10 401 859 299 761 0.0 548
MsaG002883 MtrunA17_Chr7g0227331 67.363 383 119 3 445 821 207 589 0.0 546
MsaG002883 MtrunA17_Chr6g0449401 58.099 463 148 6 400 821 193 650 4.28e-180 534
MsaG002883 MtrunA17_Chr2g0309421 58.072 415 169 4 414 826 120 531 1.55e-164 490
MsaG002883 MtrunA17_Chr8g0356291 55.634 426 178 7 412 831 68 488 2.93e-152 457
MsaG002883 MtrunA17_Chr4g0063311 53.061 392 169 4 445 821 66 457 5.38e-139 421
MsaG002883 MtrunA17_Chr2g0321101 53.018 381 152 6 449 814 66 434 1.39e-127 391
MsaG002883 MtrunA17_Chr8g0381091 49.250 400 166 7 438 821 45 423 2.43e-125 385
MsaG002883 MtrunA17_Chr2g0285711 50.000 392 162 9 445 823 57 427 4.91e-125 384
MsaG002883 MtrunA17_Chr2g0312641 45.946 444 193 15 428 859 51 459 7.25e-112 350
MsaG002883 MtrunA17_Chr4g0030361 45.745 376 156 4 445 820 282 609 1.03e-105 340
MsaG002883 MtrunA17_Chr8g0369091 44.241 382 168 4 445 826 572 908 3.84e-103 341
MsaG002883 MtrunA17_Chr2g0327561 45.263 380 163 4 445 820 601 939 4.72e-101 336
MsaG002883 MtrunA17_Chr4g0032761 39.305 374 194 9 467 821 10 369 3.83e-76 254
MsaG002883 MtrunA17_Chr8g0338741 39.733 375 190 10 467 827 15 367 3.78e-75 251
MsaG002883 MtrunA17_Chr2g0329011 39.944 358 176 7 467 821 12 333 4.30e-75 250
MsaG002883 MtrunA17_Chr7g0234641 38.172 372 198 9 462 821 1 352 2.79e-70 238
MsaG002883 MtrunA17_Chr6g0478601 37.719 342 168 8 469 809 108 405 2.75e-59 211
MsaG002883 MtrunA17_Chr5g0428981 36.550 342 171 8 469 809 760 1056 3.88e-59 219
MsaG002883 MtrunA17_Chr4g0018201 36.257 342 172 8 469 809 756 1052 5.87e-59 219
MsaG002883 MtrunA17_Chr3g0135951 32.258 372 213 11 445 809 67 406 6.20e-48 178
MsaG002883 MtrunA17_Chr1g0187581 31.335 367 212 8 461 822 106 437 2.88e-47 177
MsaG002883 MtrunA17_Chr1g0153321 31.831 355 204 9 461 812 97 416 4.97e-46 173
MsaG002883 MtrunA17_Chr1g0183651 31.063 367 212 10 461 822 109 439 8.28e-45 170
MsaG002883 MtrunA17_Chr1g0167351 30.491 387 226 11 467 844 105 457 9.99e-45 169
MsaG002883 MtrunA17_Chr7g0261491 30.458 371 213 10 461 822 109 443 1.98e-44 169
MsaG002883 MtrunA17_Chr2g0299781 30.029 343 207 8 471 809 112 425 1.78e-41 159
MsaG002883 MtrunA17_Chr1g0167311 28.947 380 233 8 444 821 87 431 1.26e-40 157
MsaG002883 MtrunA17_Chr7g0245031 37.107 159 98 1 467 625 143 299 1.08e-26 114
MsaG002883 MtrunA17_Chr7g0245031 47.748 111 55 2 700 809 301 409 8.88e-24 105
MsaG002883 MtrunA17_Chr4g0059751 37.126 167 91 4 462 619 80 241 1.35e-26 113
MsaG002883 MtrunA17_Chr4g0059751 41.964 112 62 2 700 810 249 358 1.32e-24 107
MsaG002883 MtrunA17_Chr1g0197721 36.667 150 89 2 469 616 48 193 9.85e-26 112
MsaG002883 MtrunA17_Chr1g0197721 36.800 125 76 2 697 820 212 334 4.56e-15 79.0
MsaG002883 MtrunA17_Chr3g0125381 41.071 112 62 1 694 805 100 207 5.95e-24 100
MsaG002883 MtrunA17_Chr3g0125381 35.922 103 62 2 522 623 2 101 4.19e-12 66.6
MsaG002883 MtrunA17_Chr8g0351491 27.300 337 164 8 469 805 13 268 6.97e-24 102
MsaG002883 MtrunA17_Chr8g0353621 27.164 335 163 8 469 803 7 260 5.96e-21 94.0
MsaG002883 MtrunA17_Chr3g0140631 36.129 155 93 2 469 621 34 184 1.98e-20 92.8
MsaG002883 MtrunA17_Chr3g0140631 37.963 108 63 1 697 804 185 288 4.85e-17 82.8
MsaG002883 MtrunA17_Chr6g0453681 26.549 339 165 9 469 805 16 272 2.24e-19 92.4
MsaG002883 MtrunA17_Chr2g0284031 26.462 325 163 7 467 790 26 275 4.31e-19 91.7
MsaG002883 MtrunA17_Chr6g0468751 26.627 338 164 9 469 804 16 271 5.41e-19 91.3
MsaG002883 MtrunA17_Chr4g0013131 32.903 155 101 2 465 619 5 156 4.15e-18 88.2
MsaG002883 MtrunA17_Chr3g0114511 33.548 155 98 1 465 619 25 174 2.00e-17 85.9
MsaG002883 MtrunA17_Chr6g0486661 33.544 158 96 5 669 820 880 1034 3.23e-17 87.0
MsaG002883 MtrunA17_Chr3g0132671 26.302 384 163 16 469 818 16 313 4.31e-17 85.5
MsaG002883 MtrunA17_Chr8g0379091 25.704 284 137 6 467 749 21 231 2.20e-16 83.2
MsaG002883 MtrunA17_Chr7g0244521 31.410 156 102 2 465 619 5 156 3.34e-16 82.4
MsaG002883 MtrunA17_Chr3g0107011 29.814 161 109 2 459 619 2 158 3.52e-16 82.4
MsaG002883 MtrunA17_Chr4g0001331 31.757 148 98 1 472 619 20 164 1.00e-15 80.9
MsaG002883 MtrunA17_Chr1g0188031 32.680 153 99 4 469 619 17 167 1.32e-15 80.1
MsaG002883 MtrunA17_Chr1g0205421 32.692 156 102 1 463 618 3 155 1.34e-15 80.5
MsaG002883 MtrunA17_Chr5g0432471 29.139 151 104 2 469 619 9 156 3.01e-15 79.3
MsaG002883 MtrunA17_Chr8g0346071 27.950 161 114 1 472 632 17 175 4.48e-15 78.6
MsaG002883 MtrunA17_Chr2g0284011 28.866 194 120 6 465 655 5 183 6.01e-15 78.2
MsaG002883 MtrunA17_Chr3g0107051 31.757 148 98 2 472 619 21 165 6.91e-15 78.2
MsaG002883 MtrunA17_Chr2g0304111 30.000 150 99 2 472 619 23 168 7.31e-15 78.2
MsaG002883 MtrunA17_Chr4g0074111 30.323 155 105 2 464 618 10 161 1.09e-14 77.0
MsaG002883 MtrunA17_Chr7g0272841 33.557 149 88 4 478 619 74 218 1.12e-14 78.2
MsaG002883 MtrunA17_Chr6g0450571 31.818 154 101 3 467 619 11 161 2.61e-14 77.0
MsaG002883 MtrunA17_Chr8g0346081 27.950 161 114 2 472 632 17 175 2.95e-14 76.3
MsaG002883 MtrunA17_Chr2g0286501 33.117 154 93 3 469 621 46 190 3.99e-14 77.0
MsaG002883 MtrunA17_Chr3g0091311 30.968 155 104 1 465 619 5 156 4.63e-14 73.2
MsaG002883 MtrunA17_Chr2g0302431 30.189 159 109 2 461 619 9 165 4.80e-14 75.5
MsaG002883 MtrunA17_Chr7g0274941 38.318 107 59 3 700 803 171 273 7.25e-14 73.2
MsaG002883 MtrunA17_Chr7g0274941 30.201 149 99 3 470 616 14 159 1.69e-12 69.3
MsaG002883 MtrunA17_Chr1g0190131 37.624 101 57 2 705 803 167 263 7.81e-14 72.8
MsaG002883 MtrunA17_Chr3g0130151 32.278 158 99 3 476 629 248 401 8.78e-14 75.5
MsaG002883 MtrunA17_Chr5g0441011 31.707 123 78 2 499 619 40 158 9.64e-14 74.3
MsaG002883 MtrunA17_Chr4g0008561 37.736 106 60 3 701 804 175 276 1.34e-13 75.1
MsaG002883 MtrunA17_Chr1g0190831 28.571 154 104 3 469 619 1 151 2.06e-13 73.9
MsaG002883 MtrunA17_Chr2g0321841 29.375 160 105 4 469 623 1 157 2.59e-13 74.3
MsaG002883 MtrunA17_Chr1g0150321 32.051 156 101 2 464 619 7 157 2.69e-13 72.8
MsaG002883 MtrunA17_Chr4g0025671 29.221 154 103 3 469 619 5 155 3.42e-13 73.9
MsaG002883 MtrunA17_Chr1g0166101 29.605 152 104 2 469 619 21 170 4.63e-13 72.4
MsaG002883 MtrunA17_Chr5g0428031 25.153 163 116 2 472 632 9 167 5.08e-13 72.4
MsaG002883 MtrunA17_Chr5g0432491 31.757 148 99 2 472 619 23 168 6.23e-13 72.0
MsaG002883 MtrunA17_Chr2g0317001 31.081 148 98 2 472 619 15 158 7.23e-13 72.4
MsaG002883 MtrunA17_Chr8g0386981 33.562 146 89 3 478 619 414 555 8.01e-13 72.4
MsaG002883 MtrunA17_Chr1g0203881 34.211 152 94 4 472 619 41 190 1.06e-12 71.6
MsaG002883 MtrunA17_Chr4g0000431 29.221 154 105 3 467 619 19 169 1.07e-12 72.0
MsaG002883 MtrunA17_Chr4g0047191 23.361 244 114 3 519 762 94 264 1.84e-12 69.7
MsaG002883 MtrunA17_Chr5g0419441 30.405 148 100 2 472 619 239 383 1.86e-12 71.2
MsaG002883 MtrunA17_Chr1g0188991 23.315 356 184 11 470 820 13 284 2.12e-12 70.9
MsaG002883 MtrunA17_Chr1g0170551 34.906 106 63 2 703 808 162 261 2.46e-12 71.2
MsaG002883 MtrunA17_Chr4g0061141 31.844 179 97 7 454 619 85 251 2.48e-12 70.9
MsaG002883 MtrunA17_Chr1g0176751 34.746 118 64 4 702 817 283 389 2.94e-12 70.5
MsaG002883 MtrunA17_Chr1g0202831 30.137 146 98 3 476 619 415 558 3.34e-12 70.5
MsaG002883 MtrunA17_Chr2g0333821 33.108 148 96 2 472 619 14 158 3.52e-12 69.7
MsaG002883 MtrunA17_Chr7g0252301 30.952 168 107 4 471 635 854 1015 4.41e-12 70.5
MsaG002883 MtrunA17_Chr8g0384301 31.210 157 102 4 476 629 303 456 4.68e-12 69.7
MsaG002883 MtrunA17_Chr4g0063881 29.412 136 90 2 499 632 38 169 5.95e-12 68.9
MsaG002883 MtrunA17_Chr1g0173921 27.389 157 112 2 469 624 1 156 6.18e-12 69.7
MsaG002883 MtrunA17_Chr1g0200601 35.032 157 95 5 469 620 26 180 6.93e-12 68.9
MsaG002883 MtrunA17_Chr4g0040141 33.544 158 84 6 472 619 129 275 8.27e-12 68.9
MsaG002883 MtrunA17_Chr3g0132591 36.054 147 80 4 478 621 118 253 9.06e-12 68.6
MsaG002883 MtrunA17_Chr2g0330211 30.667 150 99 3 472 619 18 164 9.33e-12 68.6
MsaG002883 MtrunA17_Chr8g0385341 31.613 155 96 4 472 620 30 180 1.45e-11 67.8
MsaG002883 MtrunA17_Chr1g0185221 27.922 154 105 3 469 619 1 151 1.59e-11 68.2
MsaG002883 MtrunA17_Chr7g0258051 26.452 155 110 3 469 621 13 165 1.67e-11 68.2
MsaG002883 MtrunA17_Chr4g0047211 22.951 244 115 3 519 762 89 259 1.96e-11 66.6
MsaG002883 MtrunA17_Chr2g0317501 33.333 159 83 7 472 619 134 280 3.40e-11 67.0
MsaG002883 MtrunA17_Chr3g0131861 33.125 160 84 7 471 619 96 243 5.06e-11 66.2
MsaG002883 MtrunA17_Chr2g0276831 31.737 167 99 6 476 635 14 172 7.98e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG002883 AT3G52890.2 52.720 956 333 31 1 859 1 934 0.0 827
MsaG002883 AT3G52890.4 52.720 956 333 31 1 859 1 934 0.0 827
MsaG002883 AT3G52890.1 52.720 956 333 31 1 859 1 934 0.0 827
MsaG002883 AT3G52890.3 52.720 956 333 31 1 859 1 934 0.0 827
MsaG002883 AT2G36350.1 50.777 965 353 26 1 859 1 949 0.0 822
MsaG002883 AT5G03640.2 71.397 458 103 11 420 859 479 926 0.0 662
MsaG002883 AT5G03640.2 33.418 392 186 14 1 372 1 337 1.21e-30 130
MsaG002883 AT5G03640.1 71.397 458 103 11 420 859 479 926 0.0 662
MsaG002883 AT5G03640.1 33.418 392 186 14 1 372 1 337 1.21e-30 130
MsaG002883 AT5G47750.1 61.895 475 173 5 393 859 112 586 0.0 589
MsaG002883 AT4G26610.1 62.937 429 153 5 402 827 54 479 0.0 553
MsaG002883 AT5G55910.2 60.508 433 155 6 404 827 44 469 1.98e-179 526
MsaG002883 AT5G55910.1 60.508 433 155 6 404 827 44 469 1.98e-179 526
MsaG002883 AT2G44830.2 61.972 426 147 8 409 827 303 720 8.56e-179 534
MsaG002883 AT2G44830.3 61.972 426 147 8 409 827 303 720 8.56e-179 534
MsaG002883 AT2G44830.1 61.972 426 147 8 409 827 303 720 8.56e-179 534
MsaG002883 AT3G27580.2 64.398 382 130 6 445 821 153 533 1.55e-172 511
MsaG002883 AT3G27580.1 64.398 382 130 6 445 821 153 533 1.55e-172 511
MsaG002883 AT5G40030.1 56.222 450 174 9 421 859 62 499 5.94e-170 502
MsaG002883 AT3G12690.1 62.368 380 131 3 445 822 158 527 6.51e-165 492
MsaG002883 AT3G12690.3 62.368 380 131 3 445 822 158 527 6.51e-165 492
MsaG002883 AT3G12690.2 62.368 380 131 3 445 822 158 527 6.51e-165 492
MsaG002883 AT1G79250.1 60.614 391 152 2 438 826 112 502 8.13e-165 491
MsaG002883 AT1G79250.3 60.614 391 152 2 438 826 112 502 8.13e-165 491
MsaG002883 AT1G79250.2 60.614 391 152 2 438 826 112 502 8.13e-165 491
MsaG002883 AT1G79250.4 60.614 391 152 2 438 826 112 502 8.13e-165 491
MsaG002883 AT1G16440.1 59.375 384 143 5 445 826 86 458 2.03e-155 464
MsaG002883 AT3G44610.1 55.000 360 130 7 477 814 74 423 3.31e-128 392
MsaG002883 AT2G34650.1 52.972 387 147 8 445 821 50 411 3.85e-128 392
MsaG002883 AT2G26700.1 45.435 460 185 9 419 821 32 482 1.16e-125 389
MsaG002883 AT5G58140.6 45.333 375 160 2 446 820 551 880 8.20e-104 342
MsaG002883 AT5G58140.7 45.333 375 160 2 446 820 551 880 8.20e-104 342
MsaG002883 AT5G58140.5 45.333 375 160 2 446 820 551 880 8.20e-104 342
MsaG002883 AT5G58140.2 45.333 375 160 2 446 820 551 880 8.20e-104 342
MsaG002883 AT5G58140.1 45.333 375 160 2 446 820 551 880 8.20e-104 342
MsaG002883 AT3G14370.1 44.764 382 171 6 447 819 61 411 1.59e-103 329
MsaG002883 AT5G58140.3 45.380 368 156 2 446 813 551 873 2.58e-102 338
MsaG002883 AT1G53700.1 45.337 386 174 8 447 825 66 421 1.14e-98 316
MsaG002883 AT3G45780.2 43.883 376 168 2 445 820 636 968 2.46e-97 327
MsaG002883 AT3G45780.1 43.883 376 168 2 445 820 636 968 2.46e-97 327
MsaG002883 AT3G20830.1 39.221 385 191 11 466 833 15 373 4.90e-71 240
MsaG002883 AT1G51170.1 39.674 368 183 9 467 821 17 358 5.06e-71 240
MsaG002883 AT4G13000.1 36.388 371 199 10 467 833 15 352 8.79e-67 227
MsaG002883 AT3G25250.1 35.829 374 195 9 461 821 6 347 2.40e-65 225
MsaG002883 AT1G45160.2 38.162 359 166 8 467 819 665 973 7.18e-59 218
MsaG002883 AT1G45160.1 38.162 359 166 8 467 819 665 973 1.53e-58 217
MsaG002883 AT1G48490.4 37.391 345 163 10 467 809 824 1117 6.74e-58 216
MsaG002883 AT1G48490.3 37.391 345 163 10 467 809 823 1116 7.10e-58 216
MsaG002883 AT1G48490.2 37.391 345 163 10 467 809 823 1116 7.10e-58 216
MsaG002883 AT1G48490.1 37.391 345 163 10 467 809 823 1116 7.10e-58 216
MsaG002883 AT5G62310.1 37.026 343 169 10 469 809 751 1048 1.02e-57 215
MsaG002883 AT3G17850.1 37.135 342 170 8 469 809 879 1176 4.47e-57 214
MsaG002883 AT1G30640.2 30.688 378 225 8 450 823 98 442 2.54e-49 184
MsaG002883 AT1G30640.1 30.688 378 225 8 450 823 98 442 2.54e-49 184
MsaG002883 AT1G30640.3 30.423 378 226 8 450 823 5 349 3.79e-49 181
MsaG002883 AT4G14350.2 31.414 382 220 9 447 822 94 439 3.02e-46 174
MsaG002883 AT4G14350.1 31.414 382 220 9 447 822 94 439 3.02e-46 174
MsaG002883 AT4G14350.4 31.414 382 220 9 447 822 94 439 3.02e-46 174
MsaG002883 AT4G14350.3 31.414 382 220 9 447 822 94 439 3.35e-46 174
MsaG002883 AT2G20470.3 30.518 367 213 8 461 822 113 442 4.79e-45 171
MsaG002883 AT1G03920.1 30.894 369 210 10 461 822 126 456 5.88e-45 171
MsaG002883 AT1G03920.3 30.894 369 210 10 461 822 126 456 5.88e-45 171
MsaG002883 AT3G23310.1 29.122 467 275 15 364 822 24 442 7.91e-45 171
MsaG002883 AT5G09890.2 30.812 357 201 8 461 809 91 409 8.03e-45 170
MsaG002883 AT2G20470.2 30.518 367 213 8 461 822 113 442 8.49e-45 171
MsaG002883 AT2G20470.1 30.518 367 213 8 461 822 113 442 8.49e-45 171
MsaG002883 AT5G09890.1 30.812 357 201 8 461 809 91 409 1.01e-44 169
MsaG002883 AT4G33080.2 29.351 385 233 10 447 822 69 423 1.13e-44 169
MsaG002883 AT1G03920.2 30.894 369 210 10 461 822 13 343 1.15e-44 168
MsaG002883 AT4G33080.1 29.351 385 233 10 447 822 69 423 1.28e-44 169
MsaG002883 AT2G19400.1 29.598 348 212 8 467 809 100 419 2.25e-38 151
MsaG002883 AT5G58140.4 43.511 131 74 0 446 576 551 681 3.84e-29 124
MsaG002883 AT3G08720.1 38.710 155 93 1 465 619 133 285 2.77e-28 120
MsaG002883 AT3G08720.1 48.673 113 54 3 698 809 291 400 9.27e-27 115
MsaG002883 AT3G08720.3 38.710 155 93 1 465 619 133 285 2.77e-28 120
MsaG002883 AT3G08720.3 48.673 113 54 3 698 809 291 400 9.27e-27 115
MsaG002883 AT3G08720.4 38.710 155 93 1 465 619 133 285 2.77e-28 120
MsaG002883 AT3G08720.4 48.673 113 54 3 698 809 291 400 9.27e-27 115
MsaG002883 AT3G08720.2 38.710 155 93 1 465 619 133 285 2.77e-28 120
MsaG002883 AT3G08720.2 48.673 113 54 3 698 809 291 400 9.27e-27 115
MsaG002883 AT2G25090.1 27.976 336 167 9 472 804 15 278 5.63e-28 119
MsaG002883 AT3G08730.1 38.065 155 94 1 465 619 127 279 9.74e-28 118
MsaG002883 AT3G08730.1 49.558 113 53 3 698 809 285 394 1.82e-27 117
MsaG002883 AT3G08730.2 38.065 155 94 1 465 619 127 279 9.74e-28 118
MsaG002883 AT3G08730.2 49.558 113 53 3 698 809 285 394 1.82e-27 117
MsaG002883 AT5G04510.3 35.196 179 104 3 440 616 18 186 2.51e-26 110
MsaG002883 AT5G04510.2 35.196 179 104 3 440 616 18 186 2.73e-26 112
MsaG002883 AT5G04510.2 35.938 128 78 3 697 822 205 330 2.29e-18 89.0
MsaG002883 AT5G04510.1 35.196 179 104 3 440 616 18 186 3.96e-26 113
MsaG002883 AT5G04510.1 35.938 128 78 3 697 822 205 330 2.21e-18 89.7
MsaG002883 AT3G10540.1 35.196 179 104 3 440 616 19 187 2.09e-25 111
MsaG002883 AT3G10540.1 35.156 128 79 3 697 822 206 331 7.39e-18 88.2
MsaG002883 AT2G20050.1 42.241 116 61 3 700 812 934 1046 6.55e-20 96.3
MsaG002883 AT2G20050.2 42.241 116 61 3 700 812 931 1043 7.06e-20 95.9
MsaG002883 AT2G45490.1 41.905 105 57 1 700 804 173 273 9.64e-20 90.9
MsaG002883 AT2G45490.1 33.117 154 99 2 469 621 19 169 3.50e-17 83.6
MsaG002883 AT4G18700.1 26.543 324 162 7 467 789 21 269 1.08e-19 94.0
MsaG002883 AT3G01090.3 26.685 371 182 12 469 836 16 299 2.05e-19 93.2
MsaG002883 AT3G01090.1 26.685 371 182 12 469 836 16 299 2.05e-19 93.2
MsaG002883 AT5G45810.1 25.455 330 170 7 461 789 17 271 2.69e-19 92.4
MsaG002883 AT3G01090.2 26.685 371 182 12 469 836 39 322 2.97e-19 92.8
MsaG002883 AT3G29160.3 25.959 339 167 9 469 805 17 273 8.44e-19 89.7
MsaG002883 AT3G29160.1 25.959 339 167 9 469 805 17 273 1.64e-18 90.5
MsaG002883 AT3G29160.2 25.959 339 167 9 469 805 17 273 1.64e-18 90.5
MsaG002883 AT2G25880.2 40.187 107 60 1 697 803 141 243 2.09e-18 86.3
MsaG002883 AT5G45820.1 32.484 157 103 2 463 619 3 156 2.66e-18 89.0
MsaG002883 AT2G25880.1 40.187 107 60 1 697 803 173 275 3.28e-18 86.7
MsaG002883 AT2G25880.1 28.708 209 139 3 471 677 24 224 1.19e-17 84.7
MsaG002883 AT2G25880.4 40.187 107 60 1 697 803 186 288 3.44e-18 86.7
MsaG002883 AT2G25880.4 28.708 209 139 3 471 677 37 237 3.35e-17 84.0
MsaG002883 AT5G18700.1 35.484 155 92 3 469 623 1 147 3.55e-18 90.5
MsaG002883 AT2G25880.3 40.187 107 60 1 697 803 234 336 8.70e-18 86.3
MsaG002883 AT2G25880.3 28.708 209 139 3 471 677 85 285 9.64e-17 83.2
MsaG002883 AT4G32830.1 35.714 154 93 2 469 620 28 177 1.12e-17 85.1
MsaG002883 AT4G32830.1 38.318 107 62 1 697 803 179 281 3.73e-17 83.6
MsaG002883 AT2G34180.1 24.355 349 184 8 458 805 43 312 1.12e-17 87.8
MsaG002883 AT5G25110.1 31.977 172 110 3 451 619 20 187 2.20e-17 86.7
MsaG002883 AT2G45490.2 33.117 154 99 2 469 621 19 169 4.42e-17 82.4
MsaG002883 AT2G45490.2 39.024 82 50 0 700 781 173 254 3.26e-13 70.9
MsaG002883 AT1G29230.1 25.078 319 163 6 472 789 74 317 7.17e-17 85.1
MsaG002883 AT1G12680.1 33.333 159 96 4 471 628 106 255 1.83e-16 83.6
MsaG002883 AT5G10930.1 34.667 150 92 5 472 619 12 157 4.20e-16 82.4
MsaG002883 AT4G14580.1 32.051 156 103 3 465 619 14 167 5.37e-16 82.0
MsaG002883 AT4G24400.1 29.448 163 109 2 472 632 9 167 8.40e-16 81.3
MsaG002883 AT4G24400.2 29.448 163 109 2 472 632 9 167 9.82e-16 80.9
MsaG002883 AT5G01810.1 32.911 158 102 3 466 623 7 160 1.47e-15 80.5
MsaG002883 AT5G01810.2 32.911 158 102 3 466 623 7 160 1.47e-15 80.5
MsaG002883 AT5G01810.3 32.911 158 102 3 466 623 7 160 2.43e-15 79.3
MsaG002883 AT5G58380.1 22.222 333 181 8 472 804 12 266 4.88e-15 79.3
MsaG002883 AT3G23000.1 32.468 154 97 3 469 619 22 171 7.39e-15 78.2
MsaG002883 AT3G06030.1 34.694 147 89 4 478 619 74 218 7.59e-15 79.3
MsaG002883 AT1G08650.1 38.835 103 57 2 705 805 176 274 7.92e-15 76.3
MsaG002883 AT3G04810.2 29.870 154 102 3 469 619 1 151 1.16e-14 78.6
MsaG002883 AT3G04810.1 29.870 154 102 3 469 619 1 151 1.16e-14 78.6
MsaG002883 AT3G04810.3 29.870 154 102 3 469 619 1 151 1.16e-14 78.6
MsaG002883 AT1G70430.1 31.373 153 103 1 467 619 11 161 1.72e-14 77.8
MsaG002883 AT1G70430.3 31.373 153 103 1 467 619 11 161 1.72e-14 78.2
MsaG002883 AT1G53570.7 32.121 165 106 5 468 629 210 371 1.87e-14 77.8
MsaG002883 AT1G30270.1 32.667 150 95 4 472 619 31 176 1.90e-14 77.4
MsaG002883 AT1G53570.6 32.121 165 106 5 468 629 210 371 1.92e-14 77.4
MsaG002883 AT1G70430.4 31.373 153 103 1 467 619 11 161 1.96e-14 77.8
MsaG002883 AT1G08650.2 41.304 92 52 1 705 794 176 267 2.04e-14 75.1
MsaG002883 AT1G30270.2 32.667 150 95 4 472 619 31 176 2.91e-14 76.6
MsaG002883 AT1G53570.1 32.121 165 106 5 468 629 210 371 2.99e-14 77.4
MsaG002883 AT1G53570.2 32.121 165 106 5 468 629 210 371 3.04e-14 77.0
MsaG002883 AT1G53570.3 32.121 165 106 5 468 629 210 371 3.04e-14 77.0
MsaG002883 AT1G53570.4 32.121 165 106 5 468 629 210 371 3.15e-14 77.0
MsaG002883 AT5G57630.2 27.673 159 107 3 465 619 2 156 4.79e-14 75.5
MsaG002883 AT5G57630.1 27.673 159 107 3 465 619 2 156 5.12e-14 75.5
MsaG002883 AT3G17510.1 28.033 239 135 7 469 675 17 250 7.46e-14 75.5
MsaG002883 AT1G09000.1 32.653 147 92 4 478 619 75 219 7.75e-14 75.9
MsaG002883 AT5G14720.1 31.169 154 102 3 467 619 11 161 8.53e-14 75.9
MsaG002883 AT5G14720.2 31.169 154 102 3 467 619 11 161 8.53e-14 75.9
MsaG002883 AT2G30360.1 32.903 155 97 5 472 623 21 171 8.60e-14 75.1
MsaG002883 AT1G09000.2 32.639 144 90 4 478 616 75 216 9.22e-14 75.9
MsaG002883 AT1G01140.3 30.201 149 102 2 471 619 18 164 9.78e-14 75.1
MsaG002883 AT1G01140.1 30.201 149 102 2 471 619 18 164 1.02e-13 74.7
MsaG002883 AT1G01140.2 30.201 149 102 2 471 619 18 164 1.11e-13 74.7
MsaG002883 AT1G54960.1 32.653 147 92 4 478 619 74 218 1.44e-13 75.1
MsaG002883 AT1G54960.2 32.653 147 92 4 478 619 74 218 1.44e-13 75.1
MsaG002883 AT2G26980.2 33.058 121 79 2 499 619 41 159 2.44e-13 71.6
MsaG002883 AT5G28290.1 29.870 154 102 3 469 619 1 151 2.63e-13 73.9
MsaG002883 AT5G28290.2 29.870 154 102 3 469 619 1 151 2.63e-13 73.9
MsaG002883 AT1G32320.1 32.895 152 92 3 469 619 45 187 2.89e-13 72.0
MsaG002883 AT5G28290.3 29.870 154 102 3 469 619 1 151 3.00e-13 73.9
MsaG002883 AT2G26980.1 33.058 121 79 2 499 619 41 159 3.62e-13 72.8
MsaG002883 AT2G26980.3 33.058 121 79 2 499 619 41 159 3.70e-13 73.2
MsaG002883 AT3G04530.1 35.106 94 59 1 701 792 168 261 3.81e-13 71.2
MsaG002883 AT2G26980.4 33.058 121 79 2 499 619 51 169 4.07e-13 73.2
MsaG002883 AT2G26980.5 33.058 121 79 2 499 619 41 159 4.64e-13 72.8
MsaG002883 AT4G30960.1 33.108 148 96 2 472 619 24 168 5.46e-13 72.4
MsaG002883 AT3G44200.2 29.375 160 105 4 469 623 5 161 6.71e-13 73.2
MsaG002883 AT3G44200.1 29.375 160 105 4 469 623 5 161 6.71e-13 73.2
MsaG002883 AT4G09570.1 35.669 157 94 5 469 620 21 175 9.40e-13 72.0
MsaG002883 AT5G39440.1 31.373 153 99 2 469 619 16 164 9.79e-13 72.0
MsaG002883 AT5G21326.1 31.707 123 78 2 499 619 40 158 1.11e-12 71.6
MsaG002883 AT5G39420.1 33.708 178 95 7 454 619 85 251 2.07e-12 71.2
MsaG002883 AT2G38490.1 33.987 153 88 5 472 619 28 172 2.16e-12 70.5
MsaG002883 AT5G38210.3 27.143 350 190 15 309 619 175 498 2.30e-12 71.2
MsaG002883 AT5G38210.2 27.143 350 190 15 309 619 193 516 2.46e-12 71.2
MsaG002883 AT1G54510.4 27.922 154 105 3 469 619 1 151 3.19e-12 70.9
MsaG002883 AT1G54510.2 27.922 154 105 3 469 619 1 151 3.19e-12 70.9
MsaG002883 AT1G54510.1 27.922 154 105 3 469 619 1 151 3.19e-12 70.9
MsaG002883 AT1G54510.3 27.922 154 105 3 469 619 1 151 3.19e-12 70.9
MsaG002883 AT4G24100.1 29.139 151 103 2 470 619 31 178 4.13e-12 70.5
MsaG002883 AT4G24100.2 29.139 151 103 2 470 619 31 178 4.86e-12 70.1
MsaG002883 AT5G35410.2 28.824 170 111 4 499 664 38 201 5.38e-12 68.9
MsaG002883 AT1G50240.3 34.951 103 61 2 703 805 161 257 5.58e-12 70.5
MsaG002883 AT1G50240.2 34.951 103 61 2 703 805 161 257 5.58e-12 70.5
MsaG002883 AT4G24100.4 29.139 151 103 2 470 619 47 194 5.66e-12 70.1
MsaG002883 AT4G24100.3 29.139 151 103 2 470 619 47 194 6.12e-12 70.1
MsaG002883 AT1G69220.1 29.801 151 97 3 472 619 249 393 6.20e-12 70.1
MsaG002883 AT4G14480.1 30.201 149 101 2 472 619 15 161 6.89e-12 69.3
MsaG002883 AT5G35410.1 28.824 170 111 4 499 664 38 201 8.65e-12 68.9
MsaG002883 AT1G24650.1 31.795 195 112 8 435 618 513 697 8.91e-12 69.7
MsaG002883 AT4G04720.2 30.323 155 98 4 472 620 80 230 9.77e-12 68.9
MsaG002883 AT4G04720.1 30.323 155 98 4 472 620 80 230 9.77e-12 68.9
MsaG002883 AT5G01820.1 32.237 152 100 2 472 623 22 170 9.81e-12 68.6
MsaG002883 AT1G53165.1 29.730 148 100 2 472 619 15 158 9.98e-12 69.3
MsaG002883 AT1G35670.1 35.032 157 95 5 469 620 22 176 1.01e-11 68.9
MsaG002883 AT1G53165.2 29.730 148 100 2 472 619 15 158 1.03e-11 69.3
MsaG002883 AT2G01820.1 30.698 215 128 7 410 618 536 735 1.04e-11 69.3
MsaG002883 AT1G53165.3 29.730 148 100 2 472 619 15 158 1.06e-11 69.3
MsaG002883 AT3G20860.1 25.828 151 111 1 469 619 1 150 1.12e-11 68.2
MsaG002883 AT2G41860.1 30.769 156 100 4 470 620 52 204 1.12e-11 68.9
MsaG002883 AT2G41860.2 30.769 156 100 4 470 620 52 204 1.16e-11 68.6
MsaG002883 AT3G15220.1 29.054 148 101 2 472 619 15 158 1.36e-11 68.9
MsaG002883 AT1G48260.1 31.646 158 96 5 468 619 5 156 2.32e-11 67.4
MsaG002883 AT5G38210.1 29.130 230 133 8 406 619 289 504 3.58e-11 67.4
MsaG002883 AT1G63700.1 30.556 144 96 3 478 619 406 547 3.70e-11 67.8
MsaG002883 AT1G63700.2 30.556 144 96 3 478 619 406 547 3.70e-11 67.8
MsaG002883 AT1G73500.1 29.775 178 104 6 475 648 50 210 7.64e-11 64.7

Find 193 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTCTTCGAGGGGCTTAAT+TGG 0.182487 1:+48722255 MsaT002883.1:CDS
CCAAAGCAGGGTTCTGATTC+TGG 0.182601 1:+48719520 MsaT002883.1:CDS
ATAGATCCTGCCAAGGTTTC+TGG 0.192162 1:+48721753 MsaT002883.1:CDS
TAATAGCAAACAAACAATTT+TGG 0.195592 1:-48720020 None:intergenic
TCCTCATCTACTTCAATAAA+TGG 0.257000 1:+48719415 MsaT002883.1:CDS
TTTCGGAAGACTGAACATTT+TGG 0.262861 1:-48719144 None:intergenic
GAAGCTTCCTCCGCTGAAAC+TGG 0.270970 1:+48718658 MsaT002883.1:CDS
TGCTGTTGCAACTGCAATTT+CGG 0.278792 1:-48719161 None:intergenic
GTATATCTTTCTGAACTAAT+TGG 0.279231 1:+48719997 MsaT002883.1:CDS
TTCATTGATGCTAAGTGATT+TGG 0.290582 1:+48719201 MsaT002883.1:CDS
CAAATGCAGCATGGAGTATT+AGG 0.309280 1:+48719922 MsaT002883.1:CDS
TTTGAATAGGTTCTGATGAT+TGG 0.317230 1:-48719255 None:intergenic
TGCTGAAGTCCTTCTTGCTT+TGG 0.319482 1:+48721584 MsaT002883.1:CDS
TTCCCGGCCTCTGATATTCT+TGG 0.322131 1:-48718950 None:intergenic
TTACTACTGTCAACATTAGA+AGG 0.334003 1:-48719022 None:intergenic
AATGTCAGTGGTTCTAGTTT+TGG 0.355133 1:+48719847 MsaT002883.1:CDS
TCACAAAGGTCTGGAAGTTC+TGG 0.355191 1:-48722302 None:intergenic
TCCCTCTCCTTTGATGATCT+CGG 0.360706 1:-48721988 None:intergenic
CTCTCTGGGCCAGCACCAAC+TGG 0.361010 1:+48719691 MsaT002883.1:CDS
GTCACTGATGCTAGGAGATC+AGG 0.369169 1:+48718998 MsaT002883.1:CDS
TGGGATAGCACAACGTATTA+AGG 0.373273 1:-48722279 None:intergenic
AGGATATATCCGTCCAGTTC+AGG 0.377399 1:+48718611 MsaT002883.1:CDS
AAGAGACCTATGTATATCTA+AGG 0.380607 1:+48718880 MsaT002883.1:CDS
TTCAAGTTTATTCCATCTGC+AGG 0.380968 1:-48719661 None:intergenic
AACTTTGGACTTGTTCCATC+TGG 0.386270 1:-48718767 None:intergenic
AATGTTCATCAAGTAAAGTT+GGG 0.393315 1:+48719224 MsaT002883.1:CDS
GCAGTTGATTGGTGGACTTT+TGG 0.396090 1:+48722020 MsaT002883.1:CDS
AACTTGAAGAGCGTGCTCTC+TGG 0.398133 1:+48719676 MsaT002883.1:CDS
CGAGGTACACCCATTGTCAT+TGG 0.406906 1:-48718809 None:intergenic
TCCCTTTCAGTTTGTGCCCT+AGG 0.407081 1:-48720084 None:intergenic
ATCTCCAATGGGCTCGTACT+CGG 0.410861 1:+48718535 None:intergenic
AAACTAACAAATGGGCTATC+GGG 0.412241 1:-48722140 None:intergenic
TTCATTATTAGAACCTTTGA+AGG 0.413043 1:-48722078 None:intergenic
GTTCTTCGAGGGGCTTAATT+GGG 0.414560 1:+48722256 MsaT002883.1:CDS
GTACAATGTCTGTATCTTCC+CGG 0.414759 1:-48718966 None:intergenic
GAATGTTCATCAAGTAAAGT+TGG 0.417858 1:+48719223 MsaT002883.1:CDS
CCAGAATCAGAACCCTGCTT+TGG 0.419048 1:-48719520 None:intergenic
TATATCTAAGGCATCGGAAA+TGG 0.420286 1:+48718892 MsaT002883.1:CDS
TCTCCAATGGGCTCGTACTC+GGG 0.421635 1:+48718536 None:intergenic
ATCATCAGAACCTATTCAAA+TGG 0.421660 1:+48719258 MsaT002883.1:CDS
GCCCCAGGTGGTAAGAATCT+AGG 0.421684 1:-48721846 None:intergenic
GCAAGATCAAACTCATTTGT+TGG 0.426222 1:+48721945 MsaT002883.1:CDS
CCCCTTTCTCTGTACCCAAT+CGG 0.426803 1:-48722211 None:intergenic
TTTGTTTGCTATTAAAGTAA+TGG 0.428001 1:+48720029 MsaT002883.1:CDS
CCCTCTCCTTTGATGATCTC+GGG 0.430280 1:-48721987 None:intergenic
CAACTCTACTTTACTTCCAT+TGG 0.431940 1:-48719320 None:intergenic
GACCTTTGTGAATTCGAGTT+GGG 0.431964 1:+48722314 MsaT002883.1:CDS
CTTTGATAAGATCCCTTGCT+TGG 0.432685 1:-48722163 None:intergenic
TACCTCGATCCCCACGAGTT+GGG 0.435212 1:+48718825 MsaT002883.1:CDS
TTGAATAGGTTCTGATGATT+GGG 0.441707 1:-48719254 None:intergenic
GAAGATGATTTCAGAAGTGT+TGG 0.442181 1:-48721726 None:intergenic
CTTGCTTGGAAACTAACAAA+TGG 0.443465 1:-48722149 None:intergenic
AGTCCTAGATTCTTACCACC+TGG 0.445086 1:+48721843 MsaT002883.1:CDS
TCTCGAACAAGAATGTTCTC+TGG 0.449274 1:-48721648 None:intergenic
AACCGATTGGGTACAGAGAA+AGG 0.450567 1:+48722209 MsaT002883.1:CDS
AAGGGAAATATTACGAATGC+TGG 0.453731 1:+48720101 MsaT002883.1:CDS
TCTAATGTTGACAGTAGTAA+AGG 0.467388 1:+48719025 MsaT002883.1:CDS
GAAACTAACAAATGGGCTAT+CGG 0.472767 1:-48722141 None:intergenic
AACTCGAATTCACAAAGGTC+TGG 0.477570 1:-48722311 None:intergenic
CTAATGTTGACAGTAGTAAA+GGG 0.477801 1:+48719026 MsaT002883.1:CDS
TATTTAGAGTGTACAACAAC+AGG 0.479866 1:+48722380 MsaT002883.1:CDS
AGCTACACTATATCCTGAAC+TGG 0.480141 1:-48718624 None:intergenic
GATACAGACATTGTACAATT+CGG 0.481886 1:+48718973 MsaT002883.1:CDS
CGGAAATGGCTGCTATGAAA+AGG 0.484378 1:+48718906 MsaT002883.1:CDS
AATTAGTTCAGAAAGATATA+CGG 0.484594 1:-48719995 None:intergenic
ACTTGAAGAGCGTGCTCTCT+GGG 0.489162 1:+48719677 MsaT002883.1:CDS
AACTGAAATATCTCCGGTGC+TGG 0.490362 1:+48719054 MsaT002883.1:CDS
TTGGAGTACTTGCACATGCT+CGG 0.492127 1:+48721603 MsaT002883.1:CDS
AACATTCTTGTTCGAGAAGA+CGG 0.493896 1:+48721654 MsaT002883.1:CDS
GACATGGAGCTGCAGTTGAT+TGG 0.495502 1:+48722009 MsaT002883.1:CDS
TCCGCTGAAACTGGGATACA+AGG 0.498155 1:+48718667 MsaT002883.1:CDS
CTTGTCATGGAGTATTGTCC+TGG 0.498365 1:+48720180 MsaT002883.1:CDS
CAAGCAAGGGATCTTATCAA+AGG 0.504426 1:+48722164 MsaT002883.1:CDS
TTTATTCCATCTGCAGGGCC+CGG 0.504556 1:-48719655 None:intergenic
ATGAAAAGGTTATCAAAGTC+CGG 0.505798 1:+48718920 MsaT002883.1:CDS
CTACTGTTGTTACAACCAGT+TGG 0.511761 1:-48719706 None:intergenic
CTTTGATGATCTCGGGCGCT+AGG 0.512710 1:-48721980 None:intergenic
TTCTCTGAGATCTTCGTCAA+GGG 0.516916 1:+48718730 MsaT002883.1:CDS
ACCGATTGGGTACAGAGAAA+GGG 0.517915 1:+48722210 MsaT002883.1:CDS
TGAGCCGGTGACTTTGAAGC+AGG 0.518357 1:+48718853 MsaT002883.1:CDS
TGATATTCTTGGAGAAGCTC+CGG 0.518551 1:-48718939 None:intergenic
CACTTGTTTGCGAGAGATGT+TGG 0.518948 1:+48719599 MsaT002883.1:CDS
GCATAGAGTGTTGGAAGAAA+AGG 0.520558 1:-48720129 None:intergenic
TTGCTTGGAAACTAACAAAT+GGG 0.520604 1:-48722148 None:intergenic
ACGAGTTGGGATTTCTGAGC+CGG 0.520650 1:+48718838 MsaT002883.1:CDS
TAAAGAGCCTGAAAACCGAT+TGG 0.525170 1:+48722196 MsaT002883.1:CDS
CTCCAAGAATATCAGAGGCC+GGG 0.526522 1:+48718948 MsaT002883.1:CDS
CCGATGCCTTAGATATACAT+AGG 0.527023 1:-48718886 None:intergenic
CAAACAAGTGGAGTTGTAGC+AGG 0.528559 1:-48719586 None:intergenic
TATGGTAGAACACCCTTCAA+AGG 0.528632 1:+48722065 MsaT002883.1:CDS
TTGTTACAACCAGTTGGTGC+TGG 0.529787 1:-48719700 None:intergenic
GCCTAGGGCACAAACTGAAA+GGG 0.531959 1:+48720083 MsaT002883.1:CDS
TGCCTAGGGCACAAACTGAA+AGG 0.533660 1:+48720082 MsaT002883.1:CDS
TGAGTTTGATCTTGCATCTG+TGG 0.534621 1:-48721937 None:intergenic
GGGTAAGAAGAAACCAAAGC+AGG 0.535267 1:+48719507 MsaT002883.1:CDS
GACTTGCTTTCTTCCAGCAC+CGG 0.535516 1:-48719067 None:intergenic
TGTTCTCTGGTTTCAAATCA+CGG 0.536426 1:-48721635 None:intergenic
CAACAGCAGAAAATGATACA+TGG 0.536877 1:+48719176 MsaT002883.1:CDS
CAAAGGTCTGGAAGTTCTGG+TGG 0.537172 1:-48722299 None:intergenic
AGACCTTTGTGAATTCGAGT+TGG 0.538308 1:+48722313 MsaT002883.1:CDS
ATAACACCGGGCCCTGCAGA+TGG 0.539528 1:+48719649 MsaT002883.1:CDS
TGCACATGTACCAGAAACCT+TGG 0.539921 1:-48721763 None:intergenic
CATTTGTTAGTTTCCAAGCA+AGG 0.540412 1:+48722150 MsaT002883.1:CDS
CTTCCATTGGTGTTACAACA+AGG 0.541296 1:-48719307 None:intergenic
AAAGAGCCTGAAAACCGATT+GGG 0.543386 1:+48722197 MsaT002883.1:CDS
GTGGGCTCTGCCACAAGTTG+TGG 0.543584 1:-48721918 None:intergenic
CTGCATTTGAGCATCTCGTA+TGG 0.544030 1:-48719908 None:intergenic
AAGCAAGGGATCTTATCAAA+GGG 0.546140 1:+48722165 MsaT002883.1:CDS
ATTTGTTAGTTTCCAAGCAA+GGG 0.546510 1:+48722151 MsaT002883.1:CDS
TCTCCAAGAATATCAGAGGC+CGG 0.547265 1:+48718947 MsaT002883.1:CDS
AAACAACATCCGTTCTTCGA+GGG 0.549529 1:+48722245 MsaT002883.1:CDS
CAGATCATTGCCACAACTTG+TGG 0.550134 1:+48721908 MsaT002883.1:CDS
CATGTACCAGAAACCTTGGC+AGG 0.552486 1:-48721759 None:intergenic
GCCATTTATTGAAGTAGATG+AGG 0.552846 1:-48719416 None:intergenic
TCAAGTTTATTCCATCTGCA+GGG 0.553310 1:-48719660 None:intergenic
AAGATGATTTCAGAAGTGTT+GGG 0.553518 1:-48721725 None:intergenic
CCACCTTGTTGTAACACCAA+TGG 0.553522 1:+48719304 MsaT002883.1:CDS
CACGAAGGAAGAAGATGCCT+AGG 0.553678 1:+48720067 MsaT002883.1:CDS
GTCCTAGATTCTTACCACCT+GGG 0.554174 1:+48721844 MsaT002883.1:CDS
AAACTTGGTTGTGGAGACAT+TGG 0.554545 1:+48719970 MsaT002883.1:CDS
TCACTGATGCTAGGAGATCA+GGG 0.556404 1:+48718999 MsaT002883.1:CDS
AAGCTTCCTCCGCTGAAACT+GGG 0.558427 1:+48718659 MsaT002883.1:CDS
TACCACCTGGGGCAAAAGCA+AGG 0.560142 1:+48721856 MsaT002883.1:CDS
TAACGTCACACCTGAGTGAA+AGG 0.560894 1:-48721701 None:intergenic
TTTCTCTGAGATCTTCGTCA+AGG 0.561091 1:+48718729 MsaT002883.1:CDS
ATGGAGCTGCAGTTGATTGG+TGG 0.561888 1:+48722012 MsaT002883.1:CDS
AAATCTGTCATGTCTTGTCA+TGG 0.562494 1:+48720167 MsaT002883.1:CDS
ATCATCAAAGGAGAGGGACA+TGG 0.563595 1:+48721993 MsaT002883.1:CDS
GAGTTTGATCTTGCATCTGT+GGG 0.564013 1:-48721936 None:intergenic
GATCGCACAGTCACAAAGCA+AGG 0.565695 1:+48722349 MsaT002883.1:CDS
CAATTAAGCCCCTCGAAGAA+CGG 0.565981 1:-48722254 None:intergenic
CAACATCTCTCGCAAACAAG+TGG 0.566758 1:-48719598 None:intergenic
GTACCTCGATCCCCACGAGT+TGG 0.569241 1:+48718824 MsaT002883.1:CDS
AAGCATGCAACTTGACAAGA+TGG 0.570439 1:-48721819 None:intergenic
GAGTTCAACTGAAATATCTC+CGG 0.572526 1:+48719048 MsaT002883.1:CDS
AATAAAGCATCTACGCGGAA+AGG 0.572614 1:+48719376 MsaT002883.1:CDS
AACAACATCCGTTCTTCGAG+GGG 0.572629 1:+48722246 MsaT002883.1:CDS
ATTCGGTAGTCACTGATGCT+AGG 0.574795 1:+48718990 MsaT002883.1:CDS
GCTGTTTCTGACGTAGAACA+TGG 0.575360 1:-48720212 None:intergenic
CAAAGTTCAAAGAGTAGCCA+AGG 0.577202 1:+48719784 MsaT002883.1:CDS
ACTGACATTACTCTCGTCGC+TGG 0.577572 1:-48719833 None:intergenic
CCCGAGATCATCAAAGGAGA+GGG 0.579283 1:+48721987 MsaT002883.1:CDS
TACAACAACAGGTGGACAAG+TGG 0.580591 1:+48722391 MsaT002883.1:CDS
AACTAACAAATGGGCTATCG+GGG 0.581176 1:-48722139 None:intergenic
TTCTGATATAGATCCTGCCA+AGG 0.581336 1:+48721746 MsaT002883.1:CDS
AATGCCTGCTTCAAAGTCAC+CGG 0.582267 1:-48718857 None:intergenic
TAAACAACATCCGTTCTTCG+AGG 0.583042 1:+48722244 MsaT002883.1:CDS
GGCTCAGAAATCCCAACTCG+TGG 0.584426 1:-48718836 None:intergenic
ATGTTCATCAAGTAAAGTTG+GGG 0.585560 1:+48719225 MsaT002883.1:CDS
TCCTTGTATCCCAGTTTCAG+CGG 0.586814 1:-48718668 None:intergenic
CCTATGTATATCTAAGGCAT+CGG 0.587384 1:+48718886 MsaT002883.1:CDS
GCTCAGAAATCCCAACTCGT+GGG 0.587632 1:-48718835 None:intergenic
CTTGTGAAATTGTTGAAGCG+AGG 0.588041 1:+48718561 MsaT002883.1:CDS
ATCCCAACTCGTGGGGATCG+AGG 0.588163 1:-48718827 None:intergenic
CAAGATGGTTCAATGCAGAA+TGG 0.593437 1:-48721804 None:intergenic
GTAAACTGTGCATAGAGTGT+TGG 0.596126 1:-48720138 None:intergenic
CTGGAAGAAAGCAAGTCGGT+TGG 0.598951 1:+48719073 MsaT002883.1:CDS
GCCCGAGATCATCAAAGGAG+AGG 0.600003 1:+48721986 MsaT002883.1:CDS
GTTCTACGTCAGAAACAGCT+TGG 0.600129 1:+48720216 MsaT002883.1:CDS
TTATTTGCTTCATTTGACTG+AGG 0.604064 1:-48719553 None:intergenic
CAATAGGCCTCACATGTCAA+AGG 0.604784 1:+48719870 MsaT002883.1:CDS
TCATTATTAGAACCTTTGAA+GGG 0.605401 1:-48722077 None:intergenic
GCAAGTACTCCAAAGCAAGA+AGG 0.606416 1:-48721593 None:intergenic
GATTTGAGCTATCTACCAGA+TGG 0.608922 1:+48718752 MsaT002883.1:CDS
CTAGCGCCCGAGATCATCAA+AGG 0.609684 1:+48721981 MsaT002883.1:CDS
TACTACTGCTGTAGTCACCT+TGG 0.612861 1:-48719801 None:intergenic
CTAAAATCCTTTGACATGTG+AGG 0.614502 1:-48719877 None:intergenic
AGCAAAGGCAATATAACACC+GGG 0.618196 1:+48719637 MsaT002883.1:CDS
TTGTGAAATTGTTGAAGCGA+GGG 0.619052 1:+48718562 MsaT002883.1:CDS
CCGATTGGGTACAGAGAAAG+GGG 0.621608 1:+48722211 MsaT002883.1:CDS
TCCTAGATTCTTACCACCTG+GGG 0.624909 1:+48721845 MsaT002883.1:CDS
CGAGATGCTCAAATGCAGCA+TGG 0.626391 1:+48719913 MsaT002883.1:CDS
CTCAGAAATCCCAACTCGTG+GGG 0.627023 1:-48718834 None:intergenic
CAGCAAAGGCAATATAACAC+CGG 0.627891 1:+48719636 MsaT002883.1:CDS
AGCTTCTCCAAGAATATCAG+AGG 0.631647 1:+48718943 MsaT002883.1:CDS
GGTAAGAAGAAACCAAAGCA+GGG 0.633251 1:+48719508 MsaT002883.1:CDS
AACAGCAGAAAATGATACAT+GGG 0.636959 1:+48719177 MsaT002883.1:CDS
AGAACATGGAGATCTCCTCC+AGG 0.638113 1:-48720198 None:intergenic
TTGTATCCCAGTTTCAGCGG+AGG 0.645256 1:-48718665 None:intergenic
TTAGAGTGTACAACAACAGG+TGG 0.645501 1:+48722383 MsaT002883.1:CDS
ATCGCACAGTCACAAAGCAA+GGG 0.646722 1:+48722350 MsaT002883.1:CDS
TTAGTACAGTGAAAGATGCA+AGG 0.651962 1:+48718591 MsaT002883.1:CDS
ACACTATATCCTGAACTGGA+CGG 0.652069 1:-48718620 None:intergenic
GTCATGGAGTATTGTCCTGG+AGG 0.654376 1:+48720183 MsaT002883.1:CDS
TGTGAAATAGAAAACAGCAA+AGG 0.659903 1:+48719622 MsaT002883.1:CDS
ACGAAGGAAGAAGATGCCTA+GGG 0.660068 1:+48720068 MsaT002883.1:CDS
AAAGGTCTGGAAGTTCTGGT+GGG 0.661777 1:-48722298 None:intergenic
GCACAGTCACAAAGCAAGGG+TGG 0.674594 1:+48722353 MsaT002883.1:CDS
CTCCCAACTCGAATTCACAA+AGG 0.676959 1:-48722316 None:intergenic
CCATTGGTGTTACAACAAGG+TGG 0.712169 1:-48719304 None:intergenic
GGTGCTGGAAGAAAGCAAGT+CGG 0.730109 1:+48719069 MsaT002883.1:CDS
AGCGACGAGAGTAATGTCAG+TGG 0.730559 1:+48719835 MsaT002883.1:CDS
TAGGAAATAAAGCATCTACG+CGG 0.791727 1:+48719371 MsaT002883.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 48718542 48722430 48718542 ID=MsaG002883
Chr1 mRNA 48718542 48722430 48718542 ID=MsaT002883.1;Parent=MsaG002883
Chr1 exon 48718542 48720265 48718542 ID=MsaT002883.1.exon1;Parent=MsaT002883.1
Chr1 CDS 48718542 48720265 48718542 ID=cds.MsaT002883.1;Parent=MsaT002883.1
Chr1 exon 48721575 48722430 48721575 ID=MsaT002883.1.exon2;Parent=MsaT002883.1
Chr1 CDS 48721575 48722430 48721575 ID=cds.MsaT002883.1;Parent=MsaT002883.1
Gene Sequence

>MsaT002883.1

ATGGGCTCGTACTCGGGAACTTGTGAAATTGTTGAAGCGAGGGATGACATTAGTACAGTGAAAGATGCAAGGATATATCCGTCCAGTTCAGGATATAGTGTAGCTGAGAAAAATCAGAAGCTTCCTCCGCTGAAACTGGGATACAAGGATAATCTAGATGATGATATTAATAAGCTGTTTGAAACAATTTCTCTGAGATCTTCGTCAAGGGATTTGAGCTATCTACCAGATGGAACAAGTCCAAAGTTGAAAAGCGCGTTAAAAAAGCCAATGACAATGGGTGTACCTCGATCCCCACGAGTTGGGATTTCTGAGCCGGTGACTTTGAAGCAGGCATTAAGAGACCTATGTATATCTAAGGCATCGGAAATGGCTGCTATGAAAAGGTTATCAAAGTCCGGAGCTTCTCCAAGAATATCAGAGGCCGGGAAGATACAGACATTGTACAATTCGGTAGTCACTGATGCTAGGAGATCAGGGCCTTCTAATGTTGACAGTAGTAAAGGGAGTTCAACTGAAATATCTCCGGTGCTGGAAGAAAGCAAGTCGGTTGGCTTGAATAAAGAATCACAATCTCTTCAAACTTCCAAAAGTGTATTGAGCCAAAATGTTCAGTCTTCCGAAATTGCAGTTGCAACAGCAGAAAATGATACATGGGCTTCATTGATGCTAAGTGATTTGGAATGTTCATCAAGTAAAGTTGGGGTTTCATCCCAATCATCAGAACCTATTCAAATGGAAAAACAAATGTCTGCTTCTTCTCCACCTTGTTGTAACACCAATGGAAGTAAAGTAGAGTTGCCTGAAAAAGATTCTTCCCCTAAAAAATTAGGAAATAAAGCATCTACGCGGAAAGGTATGTTGCAAACATCTTCCTCATCTACTTCAATAAATGGCAATAGAGTGTGTAAAATTTCGCGCCACAGCCCCCGAGCAGTAAAATCGATCATTAAAAACAAGAGTTTGGGTAAGAAGAAACCAAAGCAGGGTTCTGATTCTGGTTTACATGTTCCTCAGTCAAATGAAGCAAATAACAAGTCAGTTCCTGCTACAACTCCACTTGTTTGCGAGAGATGTTGGTGTGAAATAGAAAACAGCAAAGGCAATATAACACCGGGCCCTGCAGATGGAATAAACTTGAAGAGCGTGCTCTCTGGGCCAGCACCAACTGGTTGTAACAACAGTAGAGAAGTTGCAAAAGTGAAAAAGAATGGCAGATTGAAAGAGCAGCTTGAATTTTCACAAAGTTCAAAGAGTAGCCAAGGTGACTACAGCAGTAGTAGTACAAGTACCAGCGACGAGAGTAATGTCAGTGGTTCTAGTTTTGGCAATAGGCCTCACATGTCAAAGGATTTTAGATGGCAAGCCATACGAGATGCTCAAATGCAGCATGGAGTATTAGGCTTGAGAAACTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGTACCGTATATCTTTCTGAACTAATTGGCCAAAATTGTTTGTTTGCTATTAAAGTAATGGACAATGAATTTTTGGCACGAAGGAAGAAGATGCCTAGGGCACAAACTGAAAGGGAAATATTACGAATGCTGGATCATCCTTTTCTTCCAACACTCTATGCACAGTTTACATCAGAAAATCTGTCATGTCTTGTCATGGAGTATTGTCCTGGAGGAGATCTCCATGTTCTACGTCAGAAACAGCTTGGCAGATGTTTTTCAGAACCAGCAGCAAGGTTTTACGTTGCTGAAGTCCTTCTTGCTTTGGAGTACTTGCACATGCTCGGAGTTGTTTACCGTGATTTGAAACCAGAGAACATTCTTGTTCGAGAAGACGGTCACATTATGCTCACTGATTTTGACCTTTCACTCAGGTGTGACGTTAGCCCAACACTTCTGAAATCATCTTCTGATATAGATCCTGCCAAGGTTTCTGGTACATGTGCAAAGTCAAGCTGCATTGAGCCATTCTGCATTGAACCATCTTGTCAAGTTGCATGCTTCAGTCCTAGATTCTTACCACCTGGGGCAAAAGCAAGGAAACTCAAAGCTGATCTTGCTGCTCATATCAGATCATTGCCACAACTTGTGGCAGAGCCCACAGATGCAAGATCAAACTCATTTGTTGGTACTCATGAATACCTAGCGCCCGAGATCATCAAAGGAGAGGGACATGGAGCTGCAGTTGATTGGTGGACTTTTGGTGTTTTTCTGTACGAGCTTTTATATGGTAGAACACCCTTCAAAGGTTCTAATAATGAAGAAACATTAGCCAATGTCGTGTTGCAAAATCTCAGATTCCCCGATAGCCCATTTGTTAGTTTCCAAGCAAGGGATCTTATCAAAGGGTTGTTAGTTAAAGAGCCTGAAAACCGATTGGGTACAGAGAAAGGGGCTGCAGAGATTAAACAACATCCGTTCTTCGAGGGGCTTAATTGGGCCTTAATACGTTGTGCTATCCCACCAGAACTTCCAGACCTTTGTGAATTCGAGTTGGGAGTTTCAGACATGATCGCACAGTCACAAAGCAAGGGTGGTAAATATTTAGAGTGTACAACAACAGGTGGACAAGTGGAATTTGAGTTGTTTTAG
Protein sequence

>MsaT002883.1

MGSYSGTCEIVEARDDISTVKDARIYPSSSGYSVAEKNQKLPPLKLGYKDNLDDDINKLFETISLRSSSRDLSYLPDGTSPKLKSALKKPMTMGVPRSPRVGISEPVTLKQALRDLCISKASEMAAMKRLSKSGASPRISEAGKIQTLYNSVVTDARRSGPSNVDSSKGSSTEISPVLEESKSVGLNKESQSLQTSKSVLSQNVQSSEIAVATAENDTWASLMLSDLECSSSKVGVSSQSSEPIQMEKQMSASSPPCCNTNGSKVELPEKDSSPKKLGNKASTRKGMLQTSSSSTSINGNRVCKISRHSPRAVKSIIKNKSLGKKKPKQGSDSGLHVPQSNEANNKSVPATTPLVCERCWCEIENSKGNITPGPADGINLKSVLSGPAPTGCNNSREVAKVKKNGRLKEQLEFSQSSKSSQGDYSSSSTSTSDESNVSGSSFGNRPHMSKDFRWQAIRDAQMQHGVLGLRNFNLLKKLGCGDIGTVYLSELIGQNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYAQFTSENLSCLVMEYCPGGDLHVLRQKQLGRCFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKSSSDIDPAKVSGTCAKSSCIEPFCIEPSCQVACFSPRFLPPGAKARKLKADLAAHIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQNLRFPDSPFVSFQARDLIKGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCEFELGVSDMIAQSQSKGGKYLECTTTGGQVEFELF*