Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG003201 | XP_024634931.1 | 88.950 | 362 | 37 | 1 | 1 | 359 | 88 | 449 | 0.0 | 645 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG003201 | tr|A0A072VWG5|A0A072VWG5_MEDTR | 88.950 | 362 | 37 | 1 | 1 | 359 | 88 | 449 | 0.0 | 645 |
Gene ID | Type | Classification |
---|---|---|
MsaG003201 | TR | Others |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG000157 | MsaG003201 | 0.826299 | 5.210724e-54 | 1.358747e-51 |
MsaG000193 | MsaG003201 | 0.856846 | 4.745535e-62 | 3.278947e-59 |
MsaG000281 | MsaG003201 | 0.842058 | 6.058771e-58 | 2.524235e-55 |
MsaG000320 | MsaG003201 | 0.801851 | 1.242896e-48 | 1.752323e-46 |
MsaG000326 | MsaG003201 | 0.828539 | 1.521501e-54 | 4.224288e-52 |
MsaG000382 | MsaG003201 | 0.817350 | 6.006081e-52 | 1.232783e-49 |
MsaG000431 | MsaG003201 | 0.846451 | 4.055458e-59 | 1.949655e-56 |
MsaG000456 | MsaG003201 | 0.812670 | 6.487460e-51 | 1.182911e-48 |
MsaG000640 | MsaG003201 | 0.813061 | 5.332049e-51 | 9.817969e-49 |
MsaG000683 | MsaG003201 | 0.802469 | 9.288084e-49 | 1.328110e-46 |
MsaG000855 | MsaG003201 | 0.807106 | 1.009071e-49 | 1.607371e-47 |
MsaG001069 | MsaG003201 | 0.826647 | 4.307615e-54 | 1.134203e-51 |
MsaG001084 | MsaG003201 | 0.851032 | 2.206249e-60 | 1.239007e-57 |
MsaG001086 | MsaG003201 | 0.845042 | 9.740357e-59 | 4.469978e-56 |
MsaG001178 | MsaG003201 | 0.813351 | 4.609524e-51 | 8.548812e-49 |
MsaG001237 | MsaG003201 | 0.844238 | 1.599761e-58 | 7.149312e-56 |
MsaG001279 | MsaG003201 | 0.812550 | 6.892378e-51 | 1.253023e-48 |
MsaG001454 | MsaG003201 | 0.827051 | 3.453411e-54 | 9.195611e-52 |
MsaG001531 | MsaG003201 | 0.831324 | 3.211786e-55 | 9.655043e-53 |
MsaG001672 | MsaG003201 | 0.846121 | 4.983509e-59 | 2.369784e-56 |
MsaG001727 | MsaG003201 | 0.837308 | 1.028644e-56 | 3.693411e-54 |
MsaG001859 | MsaG003201 | 0.852119 | 1.089438e-60 | 6.355401e-58 |
MsaG002013 | MsaG003201 | 0.861271 | 2.274901e-63 | 1.856472e-60 |
MsaG002273 | MsaG003201 | 0.800650 | 2.183114e-48 | 2.995409e-46 |
MsaG002866 | MsaG003201 | 0.841968 | 6.398104e-58 | 2.658018e-55 |
MsaG003210 | MsaG003201 | 0.844290 | 1.549818e-58 | 6.937852e-56 |
MsaG003187 | MsaG003201 | 0.823739 | 2.082581e-53 | 5.061962e-51 |
MsaG003200 | MsaG003201 | 0.967515 | 8.725133e-127 | 7.810653e-121 |
MsaG003201 | MsaG003202 | 0.977911 | 4.678443e-144 | 9.306880e-138 |
MsaG003201 | MsaG003203 | 0.960717 | 2.569997e-118 | 1.394325e-112 |
MsaG003201 | MsaG003239 | 0.838187 | 6.135744e-57 | 2.263352e-54 |
MsaG003201 | MsaG003315 | 0.835903 | 2.336755e-56 | 8.041778e-54 |
MsaG003201 | MsaG003389 | 0.819041 | 2.498490e-52 | 5.358128e-50 |
MsaG003201 | MsaG003394 | 0.835546 | 2.874678e-56 | 9.787951e-54 |
MsaG003201 | MsaG003468 | 0.828876 | 1.262048e-54 | 3.537157e-52 |
MsaG003201 | MsaG003946 | 0.800751 | 2.082277e-48 | 2.863540e-46 |
MsaG003201 | MsaG003948 | 0.810394 | 2.015899e-50 | 3.475907e-48 |
MsaG003201 | MsaG004105 | 0.805852 | 1.849723e-49 | 2.860555e-47 |
MsaG003201 | MsaG004204 | 0.828007 | 2.041143e-54 | 5.582954e-52 |
MsaG003201 | MsaG004373 | 0.818612 | 3.124319e-52 | 6.625298e-50 |
MsaG003201 | MsaG005000 | 0.844925 | 1.047537e-58 | 4.789293e-56 |
MsaG003201 | MsaG005031 | 0.810166 | 2.256048e-50 | 3.868243e-48 |
MsaG003201 | MsaG005373 | 0.801177 | 1.705346e-48 | 2.367810e-46 |
MsaG003201 | MsaG005329 | 0.812016 | 9.002721e-51 | 1.615125e-48 |
MsaG003201 | MsaG005401 | 0.823197 | 2.784051e-53 | 6.668151e-51 |
MsaG003201 | MsaG005435 | 0.815947 | 1.234759e-51 | 2.444877e-49 |
MsaG003201 | MsaG005438 | 0.806800 | 1.170383e-49 | 1.850949e-47 |
MsaG003201 | MsaG005442 | 0.858472 | 1.573086e-62 | 1.154534e-59 |
MsaG003201 | MsaG005443 | 0.868634 | 1.141855e-65 | 1.250141e-62 |
MsaG003201 | MsaG005444 | 0.867926 | 1.925754e-65 | 2.047875e-62 |
MsaG003201 | MsaG005506 | 0.863572 | 4.495771e-64 | 4.013338e-61 |
MsaG003201 | MsaG005508 | 0.869296 | 6.983239e-66 | 7.857360e-63 |
MsaG003201 | MsaG005582 | 0.839971 | 2.126536e-57 | 8.294153e-55 |
MsaG003201 | MsaG005838 | 0.838477 | 5.167206e-57 | 1.923384e-54 |
MsaG003201 | MsaG005839 | 0.840651 | 1.415355e-57 | 5.639307e-55 |
MsaG003201 | MsaG005758 | 0.814436 | 2.664638e-51 | 5.078402e-49 |
MsaG003201 | MsaG005762 | 0.802214 | 1.047471e-48 | 1.489038e-46 |
MsaG003201 | MsaG005811 | 0.824755 | 1.204955e-53 | 3.010769e-51 |
MsaG003201 | MsaG005864 | 0.877802 | 9.815399e-69 | 1.600862e-65 |
MsaG003201 | MsaG006175 | 0.850118 | 3.974003e-60 | 2.162229e-57 |
MsaG003201 | MsaG006331 | 0.825655 | 7.397894e-54 | 1.894800e-51 |
MsaG003201 | MsaG006902 | 0.848144 | 1.398459e-59 | 7.116354e-57 |
MsaG003201 | MsaG006926 | 0.828010 | 2.038253e-54 | 5.575417e-52 |
MsaG003201 | MsaG007192 | 0.816863 | 7.718169e-52 | 1.564429e-49 |
MsaG003201 | MsaG007262 | 0.810626 | 1.797230e-50 | 3.116320e-48 |
MsaG003201 | MsaG007287 | 0.824491 | 1.389005e-53 | 3.445867e-51 |
MsaG003201 | MsaG007382 | 0.830740 | 4.460286e-55 | 1.318416e-52 |
MsaG003201 | MsaG007353 | 0.852060 | 1.132748e-60 | 6.594272e-58 |
MsaG003201 | MsaG007387 | 0.831031 | 3.787700e-55 | 1.129027e-52 |
MsaG003201 | MsaG007400 | 0.800966 | 1.882474e-48 | 2.601307e-46 |
MsaG003201 | MsaG007846 | 0.819318 | 2.162708e-52 | 4.671849e-50 |
MsaG003201 | MsaG007879 | 0.816779 | 8.058523e-52 | 1.629908e-49 |
MsaG003201 | MsaG007880 | 0.803827 | 4.877881e-49 | 7.196640e-47 |
MsaG003201 | MsaG007729 | 0.846565 | 3.776849e-59 | 1.822630e-56 |
MsaG003201 | MsaG007833 | 0.812403 | 7.417637e-51 | 1.343597e-48 |
MsaG003201 | MsaG008101 | 0.809518 | 3.105504e-50 | 5.242140e-48 |
MsaG003201 | MsaG008218 | 0.828779 | 1.331875e-54 | 3.722512e-52 |
MsaG003201 | MsaG008324 | 0.816394 | 9.818415e-52 | 1.966341e-49 |
MsaG003201 | MsaG008461 | 0.810226 | 2.189699e-50 | 3.760076e-48 |
MsaG003201 | MsaG008552 | 0.867449 | 2.734433e-65 | 2.851486e-62 |
MsaG003201 | MsaG008565 | 0.825770 | 6.951110e-54 | 1.786124e-51 |
MsaG003201 | MsaG008569 | 0.811490 | 1.170147e-50 | 2.072360e-48 |
MsaG003201 | MsaG008584 | 0.839408 | 2.974724e-57 | 1.139858e-54 |
MsaG003201 | MsaG008978 | 0.814512 | 2.563012e-51 | 4.893949e-49 |
MsaG003201 | MsaG009138 | 0.864300 | 2.675801e-64 | 2.458618e-61 |
MsaG003201 | MsaG009390 | 0.868593 | 1.177028e-65 | 1.286489e-62 |
MsaG003201 | MsaG009501 | 0.820265 | 1.316685e-52 | 2.916431e-50 |
MsaG003201 | MsaG010031 | 0.810206 | 2.211784e-50 | 3.796044e-48 |
MsaG003201 | MsaG010053 | 0.842576 | 4.423343e-58 | 1.873805e-55 |
MsaG003201 | MsaG010066 | 0.842525 | 4.563740e-58 | 1.930139e-55 |
MsaG003201 | MsaG010394 | 0.815087 | 1.914187e-51 | 3.708370e-49 |
MsaG003201 | MsaG010787 | 0.803245 | 6.430703e-49 | 9.360937e-47 |
MsaG003201 | MsaG010835 | 0.843033 | 3.349325e-58 | 1.439676e-55 |
MsaG003201 | MsaG010894 | 0.839261 | 3.247349e-57 | 1.238624e-54 |
MsaG003201 | MsaG010906 | 0.807677 | 7.644584e-50 | 1.234430e-47 |
MsaG003201 | MsaG010899 | 0.815593 | 1.478789e-51 | 2.901921e-49 |
MsaG003201 | MsaG011080 | 0.802661 | 8.479968e-49 | 1.217937e-46 |
MsaG003201 | MsaG011314 | 0.815105 | 1.896318e-51 | 3.675449e-49 |
MsaG003201 | MsaG011275 | 0.850405 | 3.304967e-60 | 1.816099e-57 |
MsaG003201 | MsaG011357 | 0.801027 | 1.829939e-48 | 2.532167e-46 |
MsaG003201 | MsaG011646 | 0.822729 | 3.574532e-53 | 8.453949e-51 |
MsaG003201 | MsaG011806 | 0.880053 | 1.590685e-69 | 2.877504e-66 |
MsaG003201 | MsaG012196 | 0.863601 | 4.403893e-64 | 3.935917e-61 |
MsaG003201 | MsaG012304 | 0.845697 | 6.491352e-59 | 3.043805e-56 |
MsaG003201 | MsaG012380 | 0.855612 | 1.086915e-61 | 7.179707e-59 |
MsaG003201 | MsaG012382 | 0.867817 | 2.086969e-65 | 2.209744e-62 |
MsaG003201 | MsaG012388 | 0.805325 | 2.383101e-49 | 3.640317e-47 |
MsaG003201 | MsaG012422 | 0.849780 | 4.935708e-60 | 2.655111e-57 |
MsaG003201 | MsaG012931 | 0.822196 | 4.748142e-53 | 1.106905e-50 |
MsaG003201 | MsaG012943 | 0.803309 | 6.240895e-49 | 9.097796e-47 |
MsaG003201 | MsaG013143 | 0.808200 | 5.923587e-50 | 9.686480e-48 |
MsaG003201 | MsaG013325 | 0.855495 | 1.175018e-61 | 7.728598e-59 |
MsaG003201 | MsaG013621 | 0.810182 | 2.238542e-50 | 3.839700e-48 |
MsaG003201 | MsaG013644 | 0.832075 | 2.101464e-55 | 6.457688e-53 |
MsaG003201 | MsaG013657 | 0.824154 | 1.666089e-53 | 4.095274e-51 |
MsaG003201 | MsaG013909 | 0.827386 | 2.873859e-54 | 7.724795e-52 |
MsaG003201 | MsaG013993 | 0.866410 | 5.840429e-65 | 5.838930e-62 |
MsaG003201 | MsaG014014 | 0.816900 | 7.571405e-52 | 1.536193e-49 |
MsaG003201 | MsaG014110 | 0.839582 | 2.681764e-57 | 1.033224e-54 |
MsaG003201 | MsaG014184 | 0.836297 | 1.858204e-56 | 6.471475e-54 |
MsaG003201 | MsaG014421 | 0.823051 | 3.010101e-53 | 7.181278e-51 |
MsaG003201 | MsaG014423 | 0.801524 | 1.449298e-48 | 2.028182e-46 |
MsaG003201 | MsaG014422 | 0.834297 | 5.912989e-56 | 1.939454e-53 |
MsaG003201 | MsaG014439 | 0.856636 | 5.465604e-62 | 3.747609e-59 |
MsaG003201 | MsaG014810 | 0.856484 | 6.057716e-62 | 4.130827e-59 |
MsaG003201 | MsaG014893 | 0.808656 | 4.739868e-50 | 7.836451e-48 |
MsaG003201 | MsaG014953 | 0.845899 | 5.722841e-59 | 2.701355e-56 |
MsaG003201 | MsaG015082 | 0.804604 | 3.367637e-49 | 5.058654e-47 |
MsaG003201 | MsaG015176 | 0.842342 | 5.100187e-58 | 2.144276e-55 |
MsaG003201 | MsaG015216 | 0.857215 | 3.696720e-62 | 2.588928e-59 |
MsaG003201 | MsaG015188 | 0.822555 | 3.921558e-53 | 9.231146e-51 |
MsaG003201 | MsaG015202 | 0.829646 | 8.226073e-55 | 2.356733e-52 |
MsaG003201 | MsaG015269 | 0.829007 | 1.173891e-54 | 3.302088e-52 |
MsaG003201 | MsaG016006 | 0.847280 | 2.412027e-59 | 1.192257e-56 |
MsaG003201 | MsaG016149 | 0.829432 | 9.268739e-55 | 2.639158e-52 |
MsaG003201 | MsaG016115 | 0.820276 | 1.309098e-52 | 2.900434e-50 |
MsaG003201 | MsaG016348 | 0.800459 | 2.386536e-48 | 3.260395e-46 |
MsaG003201 | MsaG016741 | 0.807142 | 9.915309e-50 | 1.580789e-47 |
MsaG003201 | MsaG016685 | 0.811472 | 1.180556e-50 | 2.089912e-48 |
MsaG003201 | MsaG016708 | 0.820011 | 1.505103e-52 | 3.311278e-50 |
MsaG003201 | MsaG016821 | 0.802372 | 9.720342e-49 | 1.386886e-46 |
MsaG003201 | MsaG017013 | 0.838666 | 4.622896e-57 | 1.730931e-54 |
MsaG003201 | MsaG017058 | 0.844398 | 1.450155e-58 | 6.514444e-56 |
MsaG003201 | MsaG017110 | 0.809710 | 2.825478e-50 | 4.791410e-48 |
MsaG003201 | MsaG017180 | 0.812836 | 5.971685e-51 | 1.093358e-48 |
MsaG003201 | MsaG017209 | 0.873580 | 2.711964e-67 | 3.664006e-64 |
MsaG003201 | MsaG017329 | 0.801658 | 1.360713e-48 | 1.910039e-46 |
MsaG003201 | MsaG017718 | 0.827175 | 3.226634e-54 | 8.621624e-52 |
MsaG003201 | MsaG017820 | 0.832037 | 2.146619e-55 | 6.589307e-53 |
MsaG003201 | MsaG018134 | 0.842872 | 3.693175e-58 | 1.579341e-55 |
MsaG003201 | MsaG018173 | 0.807954 | 6.679087e-50 | 1.085744e-47 |
MsaG003201 | MsaG018243 | 0.818292 | 3.688195e-52 | 7.756232e-50 |
MsaG003201 | MsaG018248 | 0.801382 | 1.549140e-48 | 2.160945e-46 |
MsaG003201 | MsaG018372 | 0.832225 | 1.929851e-55 | 5.955779e-53 |
MsaG003201 | MsaG018447 | 0.815512 | 1.541275e-51 | 3.018263e-49 |
MsaG003201 | MsaG018646 | 0.835366 | 3.191396e-56 | 1.080764e-53 |
MsaG003201 | MsaG018741 | 0.813259 | 4.825861e-51 | 8.929706e-49 |
MsaG003201 | MsaG018813 | 0.845624 | 6.790240e-59 | 3.176195e-56 |
MsaG003201 | MsaG019361 | 0.828138 | 1.899334e-54 | 5.214253e-52 |
MsaG003201 | MsaG019639 | 0.846035 | 5.256785e-59 | 2.492625e-56 |
MsaG003201 | MsaG019731 | 0.818051 | 4.179657e-52 | 8.735405e-50 |
MsaG003201 | MsaG019834 | 0.824079 | 1.734859e-53 | 4.255713e-51 |
MsaG003201 | MsaG020029 | 0.829018 | 1.166923e-54 | 3.283548e-52 |
MsaG003201 | MsaG020108 | 0.817100 | 6.831342e-52 | 1.393213e-49 |
MsaG003201 | MsaG020290 | 0.801978 | 1.170667e-48 | 1.655266e-46 |
MsaG003201 | MsaG020450 | 0.810739 | 1.698821e-50 | 2.953856e-48 |
MsaG003201 | MsaG020466 | 0.805012 | 2.769919e-49 | 4.200582e-47 |
MsaG003201 | MsaG020540 | 0.816706 | 8.366679e-52 | 1.689055e-49 |
MsaG003201 | MsaG020874 | 0.844608 | 1.273838e-58 | 5.762281e-56 |
MsaG003201 | MsaG020875 | 0.830606 | 4.808637e-55 | 1.415900e-52 |
MsaG003201 | MsaG020983 | 0.809140 | 3.739195e-50 | 6.254412e-48 |
MsaG003201 | MsaG021015 | 0.826218 | 5.446543e-54 | 1.417043e-51 |
MsaG003201 | MsaG021016 | 0.813071 | 5.304346e-51 | 9.769433e-49 |
MsaG003201 | MsaG021024 | 0.806062 | 1.672216e-49 | 2.598874e-47 |
MsaG003201 | MsaG021405 | 0.819392 | 2.080069e-52 | 4.502107e-50 |
MsaG003201 | MsaG021575 | 0.825341 | 8.774018e-54 | 2.227939e-51 |
MsaG003201 | MsaG021863 | 0.840080 | 1.992759e-57 | 7.798749e-55 |
MsaG003201 | MsaG021896 | 0.838175 | 6.176299e-57 | 2.277545e-54 |
MsaG003201 | MsaG022243 | 0.816632 | 8.687991e-52 | 1.750565e-49 |
MsaG003201 | MsaG022370 | 0.811861 | 9.727521e-51 | 1.738537e-48 |
MsaG003201 | MsaG022382 | 0.802251 | 1.029542e-48 | 1.464776e-46 |
MsaG003201 | MsaG022387 | 0.818537 | 3.248635e-52 | 6.875303e-50 |
MsaG003201 | MsaG022465 | 0.854154 | 2.866513e-61 | 1.796807e-58 |
MsaG003201 | MsaG022628 | 0.802629 | 8.608437e-49 | 1.235489e-46 |
MsaG003201 | MsaG023271 | 0.807923 | 6.780722e-50 | 1.101489e-47 |
MsaG003201 | MsaG023339 | 0.823771 | 2.047071e-53 | 4.980094e-51 |
MsaG003201 | MsaG023374 | 0.808052 | 6.369868e-50 | 1.037897e-47 |
MsaG003201 | MsaG023578 | 0.826901 | 3.750207e-54 | 9.944273e-52 |
MsaG003201 | MsaG023882 | 0.801966 | 1.177536e-48 | 1.664499e-46 |
MsaG003201 | MsaG023884 | 0.806185 | 1.575609e-49 | 2.455922e-47 |
MsaG003201 | MsaG024228 | 0.821120 | 8.397156e-53 | 1.902375e-50 |
MsaG003201 | MsaG024304 | 0.807044 | 1.039779e-49 | 1.653881e-47 |
MsaG003201 | MsaG024736 | 0.802841 | 7.790288e-49 | 1.123424e-46 |
MsaG003201 | MsaG025148 | 0.850950 | 2.326019e-60 | 1.302656e-57 |
MsaG003201 | MsaG025574 | 0.820313 | 1.284074e-52 | 2.847789e-50 |
MsaG003201 | MsaG025575 | 0.845082 | 9.503106e-59 | 4.366479e-56 |
MsaG003201 | MsaG025691 | 0.838493 | 5.119558e-57 | 1.906591e-54 |
MsaG003201 | MsaG026621 | 0.806910 | 1.109805e-49 | 1.759631e-47 |
MsaG003201 | MsaG026721 | 0.813024 | 5.432350e-51 | 9.993381e-49 |
MsaG003201 | MsaG026714 | 0.867225 | 3.223171e-65 | 3.331089e-62 |
MsaG003201 | MsaG026740 | 0.823687 | 2.140729e-53 | 5.196191e-51 |
MsaG003201 | MsaG026863 | 0.801576 | 1.414066e-48 | 1.981218e-46 |
MsaG003201 | MsaG026970 | 0.800775 | 2.059235e-48 | 2.833431e-46 |
MsaG003201 | MsaG027039 | 0.872813 | 4.892778e-67 | 6.393286e-64 |
MsaG003201 | MsaG027235 | 0.812609 | 6.691635e-51 | 1.218270e-48 |
MsaG003201 | MsaG027521 | 0.840559 | 1.496150e-57 | 5.943912e-55 |
MsaG003201 | MsaG027568 | 0.863354 | 5.252162e-64 | 4.648091e-61 |
MsaG003201 | MsaG027780 | 0.802281 | 1.014637e-48 | 1.444609e-46 |
MsaG003201 | MsaG028034 | 0.800295 | 2.576446e-48 | 3.506686e-46 |
MsaG003201 | MsaG028163 | 0.826034 | 6.019530e-54 | 1.558223e-51 |
MsaG003201 | MsaG028374 | 0.814445 | 2.651867e-51 | 5.055241e-49 |
MsaG003201 | MsaG028375 | 0.809328 | 3.409007e-50 | 5.727677e-48 |
MsaG003201 | MsaG028351 | 0.822524 | 3.986549e-53 | 9.376335e-51 |
MsaG003201 | MsaG028442 | 0.811642 | 1.084837e-50 | 1.928429e-48 |
MsaG003201 | MsaG028457 | 0.820963 | 9.120802e-53 | 2.057807e-50 |
MsaG003201 | MsaG028485 | 0.870520 | 2.792961e-66 | 3.307540e-63 |
MsaG003201 | MsaG028489 | 0.840401 | 1.644393e-57 | 6.500682e-55 |
MsaG003201 | MsaG028500 | 0.817511 | 5.525938e-52 | 1.138966e-49 |
MsaG003201 | MsaG028501 | 0.836719 | 1.452219e-56 | 5.121991e-54 |
MsaG003201 | MsaG028503 | 0.847198 | 2.539193e-59 | 1.251689e-56 |
MsaG003201 | MsaG028698 | 0.800975 | 1.875251e-48 | 2.591789e-46 |
MsaG003201 | MsaG028716 | 0.871581 | 1.253442e-66 | 1.553546e-63 |
MsaG003201 | MsaG028811 | 0.808451 | 5.241279e-50 | 8.622356e-48 |
MsaG003201 | MsaG028979 | 0.802326 | 9.934825e-49 | 1.415986e-46 |
MsaG003201 | MsaG029221 | 0.811669 | 1.070427e-50 | 1.904070e-48 |
MsaG003201 | MsaG029319 | 0.806122 | 1.624227e-49 | 2.527883e-47 |
MsaG003201 | MsaG029320 | 0.819637 | 1.830397e-52 | 3.986976e-50 |
MsaG003201 | MsaG029581 | 0.800540 | 2.297948e-48 | 3.145102e-46 |
MsaG003201 | MsaG029593 | 0.837793 | 7.737001e-57 | 2.819652e-54 |
MsaG003201 | MsaG029745 | 0.800382 | 2.473864e-48 | 3.373835e-46 |
MsaG003201 | MsaG029863 | 0.818265 | 3.740349e-52 | 7.860405e-50 |
MsaG003201 | MsaG029907 | 0.821854 | 5.691789e-53 | 1.314848e-50 |
MsaG003201 | MsaG029899 | 0.857437 | 3.181110e-62 | 2.246327e-59 |
MsaG003201 | MsaG029948 | 0.851358 | 1.785998e-60 | 1.014357e-57 |
MsaG003201 | MsaG029929 | 0.805050 | 2.719549e-49 | 4.127917e-47 |
MsaG003201 | MsaG030010 | 0.828849 | 1.281160e-54 | 3.587832e-52 |
MsaG003201 | MsaG030016 | 0.818139 | 3.993018e-52 | 8.364413e-50 |
MsaG003201 | MsaG030084 | 0.847239 | 2.474458e-59 | 1.221545e-56 |
MsaG003201 | MsaG030313 | 0.817462 | 5.667107e-52 | 1.166586e-49 |
MsaG003201 | MsaG030275 | 0.808542 | 5.013527e-50 | 8.265917e-48 |
MsaG003201 | MsaG030332 | 0.860991 | 2.766130e-63 | 2.233173e-60 |
MsaG003201 | MsaG030400 | 0.816866 | 7.706088e-52 | 1.562094e-49 |
MsaG003201 | MsaG030501 | 0.844111 | 1.729818e-58 | 7.698495e-56 |
MsaG003201 | MsaG030507 | 0.852960 | 6.291549e-61 | 3.780082e-58 |
MsaG003201 | MsaG030801 | 0.860553 | 3.750621e-63 | 2.978651e-60 |
MsaG003201 | MsaG031735 | 0.801939 | 1.192142e-48 | 1.684157e-46 |
MsaG003201 | MsaG032062 | 0.869050 | 8.388915e-66 | 9.343462e-63 |
MsaG003201 | MsaG032068 | 0.811801 | 1.002017e-50 | 1.788219e-48 |
MsaG003201 | MsaG033249 | 0.822563 | 3.904274e-53 | 9.192422e-51 |
MsaG003201 | MsaG033370 | 0.802110 | 1.100012e-48 | 1.559988e-46 |
MsaG003201 | MsaG033492 | 0.826731 | 4.115404e-54 | 1.086132e-51 |
MsaG003201 | MsaG033693 | 0.803227 | 6.488366e-49 | 9.440825e-47 |
MsaG003201 | MsaG033729 | 0.806158 | 1.596408e-49 | 2.486698e-47 |
MsaG003201 | MsaG033831 | 0.873022 | 4.170362e-67 | 5.499283e-64 |
MsaG003201 | MsaG033983 | 0.807922 | 6.785153e-50 | 1.102174e-47 |
MsaG003201 | MsaG033959 | 0.836642 | 1.519402e-56 | 5.346577e-54 |
MsaG003201 | MsaG034148 | 0.822810 | 3.422562e-53 | 8.112339e-51 |
MsaG003201 | MsaG034172 | 0.816498 | 9.308031e-52 | 1.869091e-49 |
MsaG003201 | MsaG034288 | 0.804641 | 3.308668e-49 | 4.974373e-47 |
MsaG003201 | MsaG034827 | 0.850137 | 3.925013e-60 | 2.137051e-57 |
MsaG003201 | MsaG034828 | 0.855563 | 1.123212e-61 | 7.406027e-59 |
MsaG003201 | MsaG034829 | 0.852227 | 1.015786e-60 | 5.947776e-58 |
MsaG003201 | MsaG034842 | 0.842915 | 3.597623e-58 | 1.540610e-55 |
MsaG003201 | MsaG035057 | 0.800422 | 2.427822e-48 | 3.314057e-46 |
MsaG003201 | MsaG035210 | 0.842599 | 4.362823e-58 | 1.849492e-55 |
MsaG003201 | MsaG035511 | 0.815428 | 1.609421e-51 | 3.145015e-49 |
MsaG003201 | MsaG035686 | 0.805999 | 1.723838e-49 | 2.674978e-47 |
MsaG003201 | MsaG035687 | 0.800278 | 2.596542e-48 | 3.532736e-46 |
MsaG003201 | MsaG036332 | 0.846100 | 5.049920e-59 | 2.399668e-56 |
MsaG003201 | MsaG037861 | 0.828751 | 1.352816e-54 | 3.778058e-52 |
MsaG003201 | MsaG037948 | 0.810182 | 2.238651e-50 | 3.839879e-48 |
MsaG003201 | MsaG038016 | 0.817510 | 5.529783e-52 | 1.139719e-49 |
MsaG003201 | MsaG038986 | 0.814049 | 3.239963e-51 | 6.115054e-49 |
MsaG003201 | MsaG039206 | 0.832329 | 1.819437e-55 | 5.631944e-53 |
MsaG003201 | MsaG039621 | 0.802702 | 8.317626e-49 | 1.195693e-46 |
MsaG003201 | MsaG039739 | 0.818962 | 2.603927e-52 | 5.572614e-50 |
MsaG003201 | MsaG039934 | 0.801547 | 1.433815e-48 | 2.007547e-46 |
MsaG003201 | MsaG040187 | 0.828102 | 1.937207e-54 | 5.312786e-52 |
MsaG003201 | MsaG040541 | 0.805076 | 2.686090e-49 | 4.079466e-47 |
MsaG003201 | MsaG040800 | 0.816129 | 1.124601e-51 | 2.237087e-49 |
MsaG003201 | MsaG040982 | 0.813660 | 3.943873e-51 | 7.371377e-49 |
MsaG003201 | MsaG040985 | 0.835592 | 2.798418e-56 | 9.541404e-54 |
MsaG003201 | MsaG040994 | 0.800248 | 2.633823e-48 | 3.580963e-46 |
MsaG003201 | MsaG041071 | 0.832199 | 1.958485e-55 | 6.039712e-53 |
MsaG003201 | MsaG041300 | 0.841369 | 9.186899e-58 | 3.744419e-55 |
MsaG003201 | MsaG041513 | 0.840595 | 1.464222e-57 | 5.823762e-55 |
MsaG003201 | MsaG041515 | 0.808110 | 6.190604e-50 | 1.010114e-47 |
MsaG003201 | MsaG041517 | 0.811462 | 1.186178e-50 | 2.099352e-48 |
MsaG003201 | MsaG041685 | 0.840592 | 1.466549e-57 | 5.832503e-55 |
MsaG003201 | MsaG041686 | 0.811042 | 1.461969e-50 | 2.560932e-48 |
MsaG003201 | MsaG041644 | 0.806028 | 1.699317e-49 | 2.638819e-47 |
MsaG003201 | MsaG041899 | 0.841587 | 8.054739e-58 | 3.305844e-55 |
MsaG003201 | MsaG041900 | 0.847749 | 1.794255e-59 | 9.010800e-57 |
MsaG003201 | MsaG041901 | 0.850679 | 2.770502e-60 | 1.537082e-57 |
MsaG003201 | MsaG041902 | 0.838110 | 6.418323e-57 | 2.362022e-54 |
MsaG003201 | MsaG041903 | 0.841228 | 1.000185e-57 | 4.058532e-55 |
MsaG003201 | MsaG041904 | 0.825869 | 6.587246e-54 | 1.697357e-51 |
MsaG003201 | MsaG042382 | 0.865985 | 7.951240e-65 | 7.813876e-62 |
MsaG003201 | MsaG042632 | 0.862007 | 1.358943e-63 | 1.140814e-60 |
MsaG003201 | MsaG043033 | 0.808614 | 4.840123e-50 | 7.993726e-48 |
MsaG003201 | MsaG043663 | 0.826345 | 5.082183e-54 | 1.326953e-51 |
MsaG003201 | MsaG043665 | 0.814094 | 3.166901e-51 | 5.984117e-49 |
MsaG003201 | MsaG043980 | 0.814007 | 3.310592e-51 | 6.241817e-49 |
MsaG003201 | MsaG044336 | 0.839271 | 3.228442e-57 | 1.231803e-54 |
MsaG003201 | MsaG044384 | 0.844594 | 1.285183e-58 | 5.810607e-56 |
MsaG003201 | MsaG044447 | 0.811254 | 1.315623e-50 | 2.316574e-48 |
MsaG003201 | MsaG044439 | 0.803042 | 7.080735e-49 | 1.025891e-46 |
MsaG003201 | MsaG044547 | 0.809960 | 2.497442e-50 | 4.260788e-48 |
MsaG003201 | MsaG044885 | 0.804367 | 3.770264e-49 | 5.632769e-47 |
MsaG003201 | MsaG044919 | 0.857459 | 3.134286e-62 | 2.215033e-59 |
MsaG003201 | MsaG045021 | 0.835626 | 2.744388e-56 | 9.366554e-54 |
MsaG003201 | MsaG045072 | 0.814655 | 2.384535e-51 | 4.569455e-49 |
MsaG003201 | MsaG045222 | 0.810420 | 1.990084e-50 | 3.433586e-48 |
MsaG003201 | MsaG045278 | 0.822384 | 4.295427e-53 | 1.006486e-50 |
MsaG003201 | MsaG045339 | 0.842146 | 5.745069e-58 | 2.400053e-55 |
MsaG003201 | MsaG045376 | 0.843090 | 3.234435e-58 | 1.392845e-55 |
MsaG003201 | MsaG045403 | 0.866350 | 6.102013e-65 | 6.084962e-62 |
MsaG003201 | MsaG045404 | 0.800680 | 2.152355e-48 | 2.955263e-46 |
MsaG003201 | MsaG045445 | 0.831792 | 2.465119e-55 | 7.513542e-53 |
MsaG003201 | MsaG045446 | 0.859232 | 9.345002e-63 | 7.057089e-60 |
MsaG003201 | MsaG045611 | 0.850520 | 3.069021e-60 | 1.693334e-57 |
MsaG003201 | MsaG046040 | 0.802208 | 1.050586e-48 | 1.493260e-46 |
MsaG003201 | MsaG046053 | 0.877914 | 8.972045e-69 | 1.470720e-65 |
MsaG003201 | MsaG046118 | 0.812288 | 7.855768e-51 | 1.418836e-48 |
MsaG003201 | MsaG046226 | 0.832468 | 1.681401e-55 | 5.225888e-53 |
MsaG003201 | MsaG046423 | 0.874826 | 1.031576e-67 | 1.472482e-64 |
MsaG003201 | MsaG046383 | 0.859473 | 7.915687e-63 | 6.032232e-60 |
MsaG003201 | MsaG046588 | 0.829233 | 1.035364e-54 | 2.930956e-52 |
MsaG003201 | MsaG046619 | 0.804445 | 3.632659e-49 | 5.436829e-47 |
MsaG003201 | MsaG046630 | 0.807661 | 7.706229e-50 | 1.243881e-47 |
MsaG003201 | MsaG046807 | 0.807426 | 8.638996e-50 | 1.386636e-47 |
MsaG003201 | MsaG046808 | 0.814767 | 2.252544e-51 | 4.328867e-49 |
MsaG003201 | MsaG046816 | 0.848852 | 8.923613e-60 | 4.650833e-57 |
MsaG003201 | MsaG046863 | 0.815877 | 1.279359e-51 | 2.528670e-49 |
MsaG003201 | MsaG046862 | 0.834941 | 4.079678e-56 | 1.364101e-53 |
MsaG003201 | MsaG047054 | 0.872221 | 7.701009e-67 | 9.809624e-64 |
MsaG003201 | MsaG047055 | 0.843016 | 3.383249e-58 | 1.453503e-55 |
MsaG003201 | MsaG047092 | 0.805068 | 2.696016e-49 | 4.093827e-47 |
MsaG003201 | MsaG047133 | 0.812494 | 7.087157e-51 | 1.286648e-48 |
MsaG003201 | MsaG002437 | 0.845284 | 8.385599e-59 | 3.878275e-56 |
MsaG003201 | MsaG000067 | 0.826752 | 4.067393e-54 | 1.074103e-51 |
MsaG003201 | MsaG003742 | 0.820106 | 1.431727e-52 | 3.157836e-50 |
MsaG003201 | MsaG002583 | 0.847430 | 2.194302e-59 | 1.090222e-56 |
MsaG003201 | MsaG007590 | 0.848553 | 1.078974e-59 | 5.566436e-57 |
MsaG003201 | MsaG008770 | 0.819029 | 2.514271e-52 | 5.390215e-50 |
MsaG003201 | MsaG007674 | 0.812558 | 6.864783e-51 | 1.248248e-48 |
MsaG003201 | MsaG008796 | 0.865797 | 9.114075e-65 | 8.889413e-62 |
MsaG003201 | MsaG009037 | 0.865273 | 1.331162e-64 | 1.271497e-61 |
MsaG003201 | MsaG013401 | 0.864325 | 2.629496e-64 | 2.418277e-61 |
MsaG003201 | MsaG011672 | 0.825952 | 6.295580e-54 | 1.625972e-51 |
MsaG003201 | MsaG014449 | 0.806668 | 1.247425e-49 | 1.966681e-47 |
MsaG003201 | MsaG013066 | 0.812810 | 6.049221e-51 | 1.106845e-48 |
MsaG003201 | MsaG014180 | 0.829433 | 9.262075e-55 | 2.637369e-52 |
MsaG003201 | MsaG015534 | 0.832098 | 2.073975e-55 | 6.377627e-53 |
MsaG003201 | MsaG014275 | 0.875258 | 7.356749e-68 | 1.070019e-64 |
MsaG003201 | MsaG013405 | 0.803053 | 7.045403e-49 | 1.021023e-46 |
MsaG003201 | MsaG013014 | 0.832461 | 1.688170e-55 | 5.245905e-53 |
MsaG003201 | MsaG018815 | 0.806523 | 1.338592e-49 | 2.103194e-47 |
MsaG003201 | MsaG020796 | 0.820332 | 1.271633e-52 | 2.821567e-50 |
MsaG003201 | MsaG018378 | 0.800900 | 1.941750e-48 | 2.679214e-46 |
MsaG003201 | MsaG026431 | 0.820098 | 1.437529e-52 | 3.169979e-50 |
MsaG003201 | MsaG029571 | 0.825848 | 6.662035e-54 | 1.715596e-51 |
MsaG003201 | MsaG028073 | 0.847382 | 2.261071e-59 | 1.121512e-56 |
MsaG003201 | MsaG027699 | 0.853289 | 5.069381e-61 | 3.081226e-58 |
MsaG003201 | MsaG027786 | 0.812742 | 6.258324e-51 | 1.143172e-48 |
MsaG003201 | MsaG032410 | 0.874751 | 1.093978e-67 | 1.556121e-64 |
MsaG003201 | MsaG032472 | 0.828632 | 1.444738e-54 | 4.021621e-52 |
MsaG003201 | MsaG032980 | 0.813995 | 3.330667e-51 | 6.277802e-49 |
MsaG003201 | MsaG032243 | 0.814595 | 2.458350e-51 | 4.703718e-49 |
MsaG003201 | MsaG032845 | 0.856982 | 4.328555e-62 | 3.005181e-59 |
MsaG003201 | MsaG031747 | 0.804510 | 3.521936e-49 | 5.279046e-47 |
MsaG003201 | MsaG033148 | 0.823585 | 2.261798e-53 | 5.474671e-51 |
MsaG003201 | MsaG033325 | 0.861170 | 2.441247e-63 | 1.984575e-60 |
MsaG003201 | MsaG034264 | 0.824160 | 1.660544e-53 | 4.082354e-51 |
MsaG003201 | MsaG037271 | 0.834577 | 5.033651e-56 | 1.664883e-53 |
MsaG003201 | MsaG038765 | 0.820083 | 1.449202e-52 | 3.194380e-50 |
MsaG003201 | MsaG037384 | 0.836225 | 1.937618e-56 | 6.733259e-54 |
MsaG003201 | MsaG037729 | 0.805439 | 2.256826e-49 | 3.456503e-47 |
MsaG003201 | MsaG035090 | 0.808269 | 5.728387e-50 | 9.382823e-48 |
MsaG003201 | MsaG037156 | 0.821481 | 6.936611e-53 | 1.586588e-50 |
MsaG003201 | MsaG038151 | 0.800709 | 2.123125e-48 | 2.917048e-46 |
MsaG003201 | MsaG037204 | 0.804924 | 2.888462e-49 | 4.371396e-47 |
MsaG003201 | MsaG036546 | 0.815883 | 1.275303e-51 | 2.521055e-49 |
MsaG003201 | MsaG037786 | 0.842225 | 5.475674e-58 | 2.293298e-55 |
MsaG003201 | MsaG039501 | 0.802951 | 7.392948e-49 | 1.068869e-46 |
MsaG003201 | MsaG039736 | 0.846093 | 5.069971e-59 | 2.408699e-56 |
MsaG003201 | MsaG036984 | 0.861338 | 2.170952e-63 | 1.776178e-60 |
MsaG003201 | MsaG043312 | 0.844916 | 1.053279e-58 | 4.814128e-56 |
MsaG003201 | MsaG043458 | 0.837898 | 7.273255e-57 | 2.659180e-54 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG003201 | MtrunA17_Chr1g0182611 | 88.950 | 362 | 37 | 1 | 1 | 359 | 88 | 449 | 0.0 | 645 |
MsaG003201 | MtrunA17_Chr1g0182621 | 64.577 | 319 | 98 | 4 | 44 | 359 | 246 | 552 | 1.99e-119 | 358 |
MsaG003201 | MtrunA17_Chr1g0182621 | 51.568 | 287 | 125 | 3 | 1 | 284 | 92 | 367 | 8.25e-83 | 264 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 87 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTACCATCAGATGATATTTC+TGG | 0.152483 | 1:+53340399 | None:intergenic |
CGGTAACAGGCTGTTTCTTC+TGG | 0.258466 | 1:+53340094 | None:intergenic |
CTCAGTTTCTCCAGAGTCAT+TGG | 0.268603 | 1:-53339749 | MsaT003201.1:CDS |
AAGGTTGTTATAAGAGAAAA+AGG | 0.277388 | 1:-53339894 | MsaT003201.1:CDS |
TGTCAAGAAATCTTGTTTGA+TGG | 0.311615 | 1:-53340838 | MsaT003201.1:intron |
CGGAAGCAGCAGCCTGCATC+TGG | 0.314800 | 1:-53340525 | MsaT003201.1:CDS |
AGTGCATAGCTTTCCCAGTT+TGG | 0.320250 | 1:+53340934 | None:intergenic |
GAGCAGCGCACGCTGGAAAA+TGG | 0.336004 | 1:-53341143 | MsaT003201.1:CDS |
TGATTCGGCCAATGCTGTTC+CGG | 0.339045 | 1:-53340878 | MsaT003201.1:CDS |
GGAATAGTAAACACATTGTC+TGG | 0.341105 | 1:-53339973 | MsaT003201.1:CDS |
AGTGGGGTTGATGTTACTTA+TGG | 0.365193 | 1:-53340600 | MsaT003201.1:CDS |
GTGGAGATCTGGTATTTATC+TGG | 0.372945 | 1:+53340054 | None:intergenic |
TATTTATCTGGATGTGTTGC+CGG | 0.380047 | 1:+53340066 | None:intergenic |
CAGAAGAAACAGCCTGTTAC+CGG | 0.388877 | 1:-53340093 | MsaT003201.1:CDS |
AGAGTTTAACATTATGCAAC+CGG | 0.398439 | 1:+53340118 | None:intergenic |
AACCCCACTCATCTCCTTTG+AGG | 0.416310 | 1:+53340614 | None:intergenic |
GAGGATTCTCTTCCACTGTA+TGG | 0.421691 | 1:-53338769 | MsaT003201.1:CDS |
GGTGTTGCCTGACGAGGCCC+TGG | 0.428575 | 1:-53340676 | MsaT003201.1:CDS |
TCAGTTTCTCCAGAGTCATT+GGG | 0.439624 | 1:-53339748 | MsaT003201.1:CDS |
CAATCTCCCGTGGTCTTATC+CGG | 0.440181 | 1:+53340234 | None:intergenic |
TCCTACTTCTTTGGTATCAC+CGG | 0.443039 | 1:-53340253 | MsaT003201.1:CDS |
GGTGAGGTCAATGTTGTTCA+TGG | 0.450542 | 1:-53340165 | MsaT003201.1:CDS |
GACACCCATTCAGTCACAAA+AGG | 0.454994 | 1:-53339995 | MsaT003201.1:CDS |
GTTGCCGGATCTCCGGTAAC+AGG | 0.455494 | 1:+53340081 | None:intergenic |
ACATGTCCCGTTCATCTTCG+AGG | 0.466823 | 1:+53340199 | None:intergenic |
GATCTCCACCTTACCAGCCT+TGG | 0.478185 | 1:-53340040 | MsaT003201.1:CDS |
ACAGCCTGTTACCGGAGATC+CGG | 0.478659 | 1:-53340085 | MsaT003201.1:CDS |
TGGATGTGTTGCCGGATCTC+CGG | 0.481700 | 1:+53340074 | None:intergenic |
AGGCTGGTAAGGTGGAGATC+TGG | 0.482190 | 1:+53340043 | None:intergenic |
GGTATTCCTCGAAGATGAAC+GGG | 0.483907 | 1:-53340205 | MsaT003201.1:CDS |
ATCTGAAGCTGATATTGATT+CGG | 0.486466 | 1:-53340893 | MsaT003201.1:CDS |
GACCACGGGAGATTGCAATA+AGG | 0.494999 | 1:-53340226 | MsaT003201.1:CDS |
GCACTAGAATGCACCGGAGA+AGG | 0.506282 | 1:-53340916 | MsaT003201.1:CDS |
GTCAATGTTGTTCATGGTAG+TGG | 0.510692 | 1:-53340159 | MsaT003201.1:CDS |
AGAAGTGGAAACTCGTGATT+CGG | 0.511753 | 1:-53340457 | MsaT003201.1:CDS |
AAATTTCATTCCTGCTTCGT+TGG | 0.514310 | 1:-53340697 | MsaT003201.1:CDS |
CTGTAAAATCTCCACAAGGA+AGG | 0.520970 | 1:-53339813 | MsaT003201.1:CDS |
TGTATGGAGCTGAGCTCCCT+AGG | 0.525355 | 1:-53338753 | MsaT003201.1:intron |
TACACTATCCGGAACAGCAT+TGG | 0.528438 | 1:+53340870 | None:intergenic |
CTACGATGACCTCCAGATGC+AGG | 0.528905 | 1:+53340513 | None:intergenic |
ACACCCATTCAGTCACAAAA+GGG | 0.532185 | 1:-53339994 | MsaT003201.1:CDS |
GTTGATGTTACTTATGGTAG+TGG | 0.532246 | 1:-53340594 | MsaT003201.1:CDS |
GGAAAATGCAAGAAACCATT+CGG | 0.536222 | 1:-53340654 | MsaT003201.1:CDS |
TTCGTTGGTGTTGCCTGACG+AGG | 0.536527 | 1:-53340682 | MsaT003201.1:CDS |
AAAAGAATGCAAAGCCTCAA+AGG | 0.537351 | 1:-53340628 | MsaT003201.1:CDS |
TGTAAAATCTCCACAAGGAA+GGG | 0.537405 | 1:-53339812 | MsaT003201.1:CDS |
CAAATTGCAGATACACTATC+CGG | 0.539970 | 1:+53340859 | None:intergenic |
TCAGGCAACACCAACGAAGC+AGG | 0.540212 | 1:+53340687 | None:intergenic |
AACATTAATAGCACGTAACC+TGG | 0.544388 | 1:+53340554 | None:intergenic |
GAGCTCTACCTCAACAGAAG+TGG | 0.545818 | 1:-53340472 | MsaT003201.1:CDS |
AGTAAACACATTGTCTGGGC+AGG | 0.549663 | 1:-53339968 | MsaT003201.1:CDS |
ATGTTGTTCATGGTAGTGGC+AGG | 0.553357 | 1:-53340155 | MsaT003201.1:CDS |
ATCAGCTTCAGATCCTTCTC+CGG | 0.554639 | 1:+53340903 | None:intergenic |
GCGAAAATAGACATGGTACC+AGG | 0.560344 | 1:-53340572 | MsaT003201.1:CDS |
AAGCCTCAAAGGAGATGAGT+GGG | 0.564158 | 1:-53340617 | MsaT003201.1:CDS |
AGGTATTCCTCGAAGATGAA+CGG | 0.564929 | 1:-53340206 | MsaT003201.1:CDS |
GCATAGCTTTCCCAGTTTGG+AGG | 0.565501 | 1:+53340937 | None:intergenic |
AAGCAGCAGCCTGCATCTGG+AGG | 0.566088 | 1:-53340522 | MsaT003201.1:CDS |
GCAGGAATAGACGTAGTGCC+CGG | 0.566956 | 1:-53340137 | MsaT003201.1:CDS |
TCCGGTGATACCAAAGAAGT+AGG | 0.573504 | 1:+53340252 | None:intergenic |
GGATACAAGTCACTCGAACA+AGG | 0.576987 | 1:-53339791 | MsaT003201.1:CDS |
ACGAGTTTCCACTTCTGTTG+AGG | 0.577453 | 1:+53340464 | None:intergenic |
CATGAACGAGCAGCGCACGC+TGG | 0.579334 | 1:-53341150 | MsaT003201.1:CDS |
CATCCAGAAATATCATCTGA+TGG | 0.590199 | 1:-53340402 | MsaT003201.1:intron |
ACGGGACATGTCAATTAAGA+CGG | 0.591957 | 1:-53340187 | MsaT003201.1:CDS |
CGGGACATGTCAATTAAGAC+GGG | 0.595490 | 1:-53340186 | MsaT003201.1:CDS |
TGACTTGTATCCCTTCCTTG+TGG | 0.599408 | 1:+53339802 | None:intergenic |
GAATAGTAAACACATTGTCT+GGG | 0.607705 | 1:-53339972 | MsaT003201.1:CDS |
CCAGCCTTGGAAAAGAGTGA+TGG | 0.608271 | 1:-53340027 | MsaT003201.1:CDS |
GATACAAGTCACTCGAACAA+GGG | 0.609110 | 1:-53339790 | MsaT003201.1:CDS |
GGGAGCTCAGCTCCATACAG+TGG | 0.610473 | 1:+53338757 | None:intergenic |
AGCTATGCACTAGAATGCAC+CGG | 0.615493 | 1:-53340922 | MsaT003201.1:CDS |
CTGCATCTGGAGGTCATCGT+AGG | 0.620919 | 1:-53340512 | MsaT003201.1:CDS |
TACCTTATTGCAATCTCCCG+TGG | 0.621061 | 1:+53340224 | None:intergenic |
GCCTTGGAAAAGAGTGATGG+AGG | 0.621071 | 1:-53340024 | MsaT003201.1:CDS |
GTATCACCGGATAAGACCAC+GGG | 0.626364 | 1:-53340240 | MsaT003201.1:CDS |
GTGTTGCCTGACGAGGCCCT+GGG | 0.635492 | 1:-53340675 | MsaT003201.1:CDS |
CATGTCAATTAAGACGGGTG+AGG | 0.637260 | 1:-53340181 | MsaT003201.1:CDS |
GAGTTTAACATTATGCAACC+GGG | 0.641017 | 1:+53340119 | None:intergenic |
CAATGACTCTGGAGAAACTG+AGG | 0.645689 | 1:+53339750 | None:intergenic |
AAAGCCTCAAAGGAGATGAG+TGG | 0.652543 | 1:-53340618 | MsaT003201.1:CDS |
GTGCTATTAATGTTTGTCAG+CGG | 0.670687 | 1:-53340545 | MsaT003201.1:CDS |
ACAGTTGAAACAGAAGCAGT+CGG | 0.677484 | 1:-53339868 | MsaT003201.1:CDS |
GGTATCACCGGATAAGACCA+CGG | 0.680385 | 1:-53340241 | MsaT003201.1:CDS |
TCTTCTGTAAAATCTCCACA+AGG | 0.702540 | 1:-53339817 | MsaT003201.1:CDS |
GGTAGTGGCGAAAATAGACA+TGG | 0.702887 | 1:-53340579 | MsaT003201.1:CDS |
AGCCTCAAAGGAGATGAGTG+GGG | 0.721063 | 1:-53340616 | MsaT003201.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 53338616 | 53341171 | 53338616 | ID=MsaG003201 |
Chr1 | mRNA | 53338616 | 53341171 | 53338616 | ID=MsaT003201.1;Parent=MsaG003201 |
Chr1 | exon | 53338616 | 53338664 | 53338616 | ID=MsaT003201.1.exon6;Parent=MsaT003201.1 |
Chr1 | CDS | 53338616 | 53338664 | 53338616 | ID=cds.MsaT003201.1;Parent=MsaT003201.1 |
Chr1 | exon | 53338754 | 53338790 | 53338754 | ID=MsaT003201.1.exon5;Parent=MsaT003201.1 |
Chr1 | CDS | 53338754 | 53338790 | 53338754 | ID=cds.MsaT003201.1;Parent=MsaT003201.1 |
Chr1 | exon | 53339728 | 53340291 | 53339728 | ID=MsaT003201.1.exon4;Parent=MsaT003201.1 |
Chr1 | CDS | 53339728 | 53340291 | 53339728 | ID=cds.MsaT003201.1;Parent=MsaT003201.1 |
Chr1 | exon | 53340403 | 53340726 | 53340403 | ID=MsaT003201.1.exon3;Parent=MsaT003201.1 |
Chr1 | CDS | 53340403 | 53340726 | 53340403 | ID=cds.MsaT003201.1;Parent=MsaT003201.1 |
Chr1 | exon | 53340839 | 53340986 | 53340839 | ID=MsaT003201.1.exon2;Parent=MsaT003201.1 |
Chr1 | CDS | 53340839 | 53340986 | 53340839 | ID=cds.MsaT003201.1;Parent=MsaT003201.1 |
Chr1 | exon | 53341130 | 53341171 | 53341130 | ID=MsaT003201.1.exon1;Parent=MsaT003201.1 |
Chr1 | CDS | 53341130 | 53341171 | 53341130 | ID=cds.MsaT003201.1;Parent=MsaT003201.1 |
Gene Sequence |
Protein sequence |