AlfalfaGEDB | MsaG003214

M. sativa ssp. caerulea / MsaG003214

KEGG: K16189
GO: GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006725 GO:0006778 GO:0006779 GO:0006783 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009639 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009889 GO:0009959 GO:0009987 GO:0010017 GO:0010029 GO:0010033 GO:0010099 GO:0010100 GO:0010114 GO:0010161 GO:0010187 GO:0010313 GO:0010468 GO:0010476 GO:0010556 GO:0015994 GO:0015995 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0033013 GO:0033014 GO:0033993 GO:0034641 GO:0042168 GO:0042221 GO:0042440 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044464 GO:0046148 GO:0046483 GO:0048519 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051186 GO:0051188 GO:0051239 GO:0051241 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071478 GO:0071482 GO:0071489 GO:0071491 GO:0071495 GO:0071704 GO:0080090 GO:0097159 GO:0104004 GO:0140110 GO:1900140 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1901700 GO:1901701 GO:1903506 GO:2000026 GO:2000030 GO:2000112 GO:2001141
PFAM: PF00010.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG003214	XP_013468377.1	92.871	533	25	4	1	530	12	534	0.0	972

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG003214	sp\|Q8GZM7\|PIF1_ARATH	41.502	506	182	24	19	504	35	446	1.03e-74	247

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG003214	tr\|A0A072VK93\|A0A072VK93_MEDTR	92.871	533	25	4	1	530	12	534	0.0	972

TFs/TRs:

Gene ID	Type	Classification
MsaG003214	TF	bHLH

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000125	MsaG003214	0.884098	5.496046e-71	1.204939e-67
MsaG000143	MsaG003214	0.823564	2.286954e-53	5.532364e-51
MsaG000210	MsaG003214	0.802073	1.119572e-48	1.586428e-46
MsaG000717	MsaG003214	0.819261	2.228242e-52	4.806261e-50
MsaG000788	MsaG003214	0.802251	1.029358e-48	1.464522e-46
MsaG000888	MsaG003214	0.800644	2.189117e-48	3.003230e-46
MsaG001009	MsaG003214	0.808987	4.030993e-50	6.717664e-48
MsaG001363	MsaG003214	0.878305	6.557266e-69	1.094405e-65
MsaG002015	MsaG003214	0.842663	4.194962e-58	1.782003e-55
MsaG002050	MsaG003214	0.872888	4.619662e-67	6.056630e-64
MsaG002069	MsaG003214	0.895869	1.434880e-75	5.796138e-72
MsaG002678	MsaG003214	0.812564	6.843197e-51	1.244512e-48
MsaG003214	MsaG003404	0.842738	4.009169e-58	1.707104e-55
MsaG003214	MsaG003514	0.820318	1.281144e-52	2.841658e-50
MsaG003214	MsaG003567	0.832959	1.271719e-55	4.009513e-53
MsaG003214	MsaG003726	0.843816	2.074115e-58	9.141744e-56
MsaG003214	MsaG003809	0.811123	1.404410e-50	2.464945e-48
MsaG003214	MsaG003997	0.815542	1.518434e-51	2.975718e-49
MsaG003214	MsaG004006	0.804733	3.165243e-49	4.769091e-47
MsaG003214	MsaG004039	0.825399	8.503568e-54	2.162601e-51
MsaG003214	MsaG004047	0.915816	9.363748e-85	1.306067e-80
MsaG003214	MsaG004419	0.842938	3.547932e-58	1.520428e-55
MsaG003214	MsaG004468	0.850880	2.433205e-60	1.359411e-57
MsaG003214	MsaG004534	0.820124	1.417862e-52	3.128783e-50
MsaG003214	MsaG004531	0.823873	1.937313e-53	4.725863e-51
MsaG003214	MsaG004621	0.817063	6.961559e-52	1.418441e-49
MsaG003214	MsaG005050	0.814843	2.167166e-51	4.172719e-49
MsaG003214	MsaG005385	0.817084	6.888959e-52	1.404374e-49
MsaG003214	MsaG005423	0.805100	2.655715e-49	4.035510e-47
MsaG003214	MsaG005541	0.862501	9.598090e-64	8.214293e-61
MsaG003214	MsaG005635	0.839415	2.963014e-57	1.135612e-54
MsaG003214	MsaG005764	0.809897	2.577045e-50	4.389872e-48
MsaG003214	MsaG006023	0.805763	1.931289e-49	2.980382e-47
MsaG003214	MsaG006034	0.834976	3.998533e-56	1.338366e-53
MsaG003214	MsaG005966	0.839246	3.275595e-57	1.248814e-54
MsaG003214	MsaG006267	0.905787	7.018786e-80	5.073016e-76
MsaG003214	MsaG006314	0.828456	1.593407e-54	4.413697e-52
MsaG003214	MsaG006431	0.809382	3.320631e-50	5.586516e-48
MsaG003214	MsaG006651	0.817072	6.929868e-52	1.412289e-49
MsaG003214	MsaG006783	0.888139	1.678387e-72	4.494048e-69
MsaG003214	MsaG006869	0.811298	1.287405e-50	2.269326e-48
MsaG003214	MsaG006994	0.826961	3.628228e-54	9.637078e-52
MsaG003214	MsaG007137	0.806154	1.599690e-49	2.491542e-47
MsaG003214	MsaG007237	0.847319	2.353776e-59	1.164983e-56
MsaG003214	MsaG007328	0.807483	8.400690e-50	1.350227e-47
MsaG003214	MsaG007571	0.844492	1.368760e-58	6.167540e-56
MsaG003214	MsaG007614	0.872596	5.780861e-67	7.483610e-64
MsaG003214	MsaG007735	0.806035	1.694025e-49	2.631046e-47
MsaG003214	MsaG007744	0.904697	2.201522e-79	1.489148e-75
MsaG003214	MsaG007914	0.804401	3.710257e-49	5.547377e-47
MsaG003214	MsaG008017	0.874687	1.149501e-67	1.630503e-64
MsaG003214	MsaG008109	0.883305	1.073958e-70	2.266085e-67
MsaG003214	MsaG008433	0.828972	1.197082e-54	3.363962e-52
MsaG003214	MsaG008646	0.872390	6.765718e-67	8.681170e-64
MsaG003214	MsaG008890	0.834782	4.472669e-56	1.488446e-53
MsaG003214	MsaG009078	0.885801	1.283769e-71	3.058882e-68
MsaG003214	MsaG009655	0.804720	3.184965e-49	4.797270e-47
MsaG003214	MsaG010065	0.800533	2.305798e-48	3.155330e-46
MsaG003214	MsaG010394	0.821451	7.047121e-53	1.610571e-50
MsaG003214	MsaG010460	0.805509	2.181459e-49	3.346523e-47
MsaG003214	MsaG010564	0.822589	3.850608e-53	9.072458e-51
MsaG003214	MsaG011071	0.813482	4.313456e-51	8.026300e-49
MsaG003214	MsaG011104	0.860439	4.059121e-63	3.209827e-60
MsaG003214	MsaG011531	0.836541	1.612005e-56	5.655094e-54
MsaG003214	MsaG011526	0.835376	3.173126e-56	1.074881e-53
MsaG003214	MsaG011873	0.808190	5.954335e-50	9.734134e-48
MsaG003214	MsaG011974	0.833084	1.184132e-55	3.747253e-53
MsaG003214	MsaG013085	0.812642	6.581079e-51	1.199112e-48
MsaG003214	MsaG014521	0.820580	1.116003e-52	2.492433e-50
MsaG003214	MsaG015707	0.821525	6.776138e-53	1.551706e-50
MsaG003214	MsaG016290	0.815775	1.347604e-51	2.656584e-49
MsaG003214	MsaG017068	0.804342	3.816882e-49	5.699007e-47
MsaG003214	MsaG017095	0.894434	5.547828e-75	2.072117e-71
MsaG003214	MsaG017324	0.809700	2.839449e-50	4.813919e-48
MsaG003214	MsaG017440	0.839926	2.184922e-57	8.509781e-55
MsaG003214	MsaG017505	0.807420	8.664992e-50	1.390623e-47
MsaG003214	MsaG017530	0.904377	3.073766e-79	2.039759e-75
MsaG003214	MsaG017702	0.901306	7.087747e-78	3.915489e-74
MsaG003214	MsaG017787	0.846193	4.764220e-59	2.270933e-56
MsaG003214	MsaG017886	0.845096	9.423230e-59	4.331731e-56
MsaG003214	MsaG018078	0.824179	1.643982e-53	4.043650e-51
MsaG003214	MsaG018085	0.801352	1.570849e-48	2.189744e-46
MsaG003214	MsaG018169	0.807462	8.489858e-50	1.363861e-47
MsaG003214	MsaG018498	0.811544	1.138746e-50	2.019443e-48
MsaG003214	MsaG018527	0.864120	3.043719e-64	2.776432e-61
MsaG003214	MsaG018582	0.821147	8.275780e-53	1.876298e-50
MsaG003214	MsaG018662	0.865164	1.439969e-64	1.369461e-61
MsaG003214	MsaG018701	0.876943	1.947603e-68	3.054816e-65
MsaG003214	MsaG018737	0.824032	1.779083e-53	4.358799e-51
MsaG003214	MsaG018744	0.844946	1.033636e-58	4.728823e-56
MsaG003214	MsaG018834	0.813167	5.055984e-51	9.334000e-49
MsaG003214	MsaG019193	0.858430	1.618768e-62	1.186243e-59
MsaG003214	MsaG019310	0.813597	4.070599e-51	7.596394e-49
MsaG003214	MsaG019409	0.806032	1.696113e-49	2.634100e-47
MsaG003214	MsaG019577	0.825171	9.621979e-54	2.431808e-51
MsaG003214	MsaG019714	0.824623	1.293684e-53	3.220850e-51
MsaG003214	MsaG019728	0.846099	5.053506e-59	2.401270e-56
MsaG003214	MsaG019924	0.856993	4.297189e-62	2.984575e-59
MsaG003214	MsaG020020	0.819466	2.001563e-52	4.340506e-50
MsaG003214	MsaG020233	0.821339	7.478937e-53	1.704174e-50
MsaG003214	MsaG020486	0.807931	6.757380e-50	1.097863e-47
MsaG003214	MsaG020526	0.858137	1.976380e-62	1.432392e-59
MsaG003214	MsaG020531	0.859858	6.069654e-63	4.693619e-60
MsaG003214	MsaG020580	0.836253	1.906091e-56	6.629459e-54
MsaG003214	MsaG020660	0.814536	2.532049e-51	4.837668e-49
MsaG003214	MsaG021523	0.818178	3.912635e-52	8.204223e-50
MsaG003214	MsaG021588	0.833346	1.019738e-55	3.251908e-53
MsaG003214	MsaG021668	0.809498	3.136093e-50	5.291279e-48
MsaG003214	MsaG023326	0.830499	5.104840e-55	1.498529e-52
MsaG003214	MsaG023618	0.839608	2.641471e-57	1.018510e-54
MsaG003214	MsaG023743	0.808826	4.361457e-50	7.240351e-48
MsaG003214	MsaG023694	0.879798	1.957490e-69	3.500101e-66
MsaG003214	MsaG023719	0.879655	2.199394e-69	3.906812e-66
MsaG003214	MsaG023924	0.839386	3.013789e-57	1.154001e-54
MsaG003214	MsaG023992	0.859923	5.802535e-63	4.498054e-60
MsaG003214	MsaG024094	0.887220	3.753014e-72	9.595427e-69
MsaG003214	MsaG024106	0.846771	3.320359e-59	1.613521e-56
MsaG003214	MsaG024684	0.868320	1.440237e-65	1.556724e-62
MsaG003214	MsaG025067	0.804595	3.381588e-49	5.078611e-47
MsaG003214	MsaG025423	0.804095	4.293386e-49	6.374111e-47
MsaG003214	MsaG025969	0.867790	2.128953e-65	2.251549e-62
MsaG003214	MsaG026738	0.809165	3.694467e-50	6.183155e-48
MsaG003214	MsaG026956	0.801207	1.681639e-48	2.336414e-46
MsaG003214	MsaG027092	0.816886	7.628041e-52	1.547082e-49
MsaG003214	MsaG027083	0.898408	1.246789e-76	5.813653e-73
MsaG003214	MsaG027457	0.848719	9.711363e-60	5.038322e-57
MsaG003214	MsaG027511	0.814138	3.098410e-51	5.860824e-49
MsaG003214	MsaG027864	0.858848	1.216365e-62	9.053024e-60
MsaG003214	MsaG027881	0.841985	6.331763e-58	2.631904e-55
MsaG003214	MsaG028044	0.842632	4.276468e-58	1.814808e-55
MsaG003214	MsaG028062	0.868256	1.509811e-65	1.627641e-62
MsaG003214	MsaG028106	0.848103	1.435110e-59	7.292692e-57
MsaG003214	MsaG028191	0.844699	1.204696e-58	5.465638e-56
MsaG003214	MsaG028234	0.831866	2.364596e-55	7.222463e-53
MsaG003214	MsaG028276	0.818800	2.832159e-52	6.035271e-50
MsaG003214	MsaG028335	0.820609	1.099087e-52	2.456492e-50
MsaG003214	MsaG028814	0.803983	4.528339e-49	6.705199e-47
MsaG003214	MsaG028877	0.805533	2.157172e-49	3.311040e-47
MsaG003214	MsaG029072	0.849165	7.313413e-60	3.852442e-57
MsaG003214	MsaG029086	0.804177	4.128010e-49	6.140092e-47
MsaG003214	MsaG029250	0.825404	8.480030e-54	2.156915e-51
MsaG003214	MsaG029579	0.807560	8.093312e-50	1.303212e-47
MsaG003214	MsaG029801	0.803811	4.914627e-49	7.248276e-47
MsaG003214	MsaG030112	0.855170	1.460106e-61	9.490563e-59
MsaG003214	MsaG030471	0.833998	7.019803e-56	2.281878e-53
MsaG003214	MsaG031043	0.899209	5.692740e-77	2.780101e-73
MsaG003214	MsaG031129	0.805625	2.063847e-49	3.174702e-47
MsaG003214	MsaG032337	0.802261	1.024370e-48	1.457789e-46
MsaG003214	MsaG032434	0.841627	7.864236e-58	3.231667e-55
MsaG003214	MsaG032479	0.824297	1.542106e-53	3.805552e-51
MsaG003214	MsaG032512	0.803837	4.855406e-49	7.165122e-47
MsaG003214	MsaG033247	0.816354	1.002155e-51	2.004987e-49
MsaG003214	MsaG033692	0.835478	2.990745e-56	1.016242e-53
MsaG003214	MsaG033991	0.820593	1.108526e-52	2.476517e-50
MsaG003214	MsaG034319	0.823902	1.907497e-53	4.656872e-51
MsaG003214	MsaG034741	0.816832	7.839645e-52	1.587805e-49
MsaG003214	MsaG035057	0.806531	1.332963e-49	2.094804e-47
MsaG003214	MsaG035200	0.854433	2.382917e-61	1.508666e-58
MsaG003214	MsaG035532	0.837365	9.952965e-57	3.579877e-54
MsaG003214	MsaG035552	0.839219	3.328243e-57	1.267835e-54
MsaG003214	MsaG036065	0.819145	2.366528e-52	5.089088e-50
MsaG003214	MsaG036109	0.862008	1.357933e-63	1.139997e-60
MsaG003214	MsaG036251	0.814472	2.615384e-51	4.988970e-49
MsaG003214	MsaG038393	0.802113	1.098546e-48	1.558013e-46
MsaG003214	MsaG038421	0.847902	1.629699e-59	8.226270e-57
MsaG003214	MsaG038518	0.807749	7.381814e-50	1.194061e-47
MsaG003214	MsaG039197	0.816856	7.744189e-52	1.569423e-49
MsaG003214	MsaG039489	0.816390	9.839424e-52	1.970318e-49
MsaG003214	MsaG039751	0.862067	1.303402e-63	1.096720e-60
MsaG003214	MsaG039895	0.804226	4.033844e-49	6.006831e-47
MsaG003214	MsaG039921	0.801528	1.446701e-48	2.024702e-46
MsaG003214	MsaG040389	0.883659	7.969420e-71	1.710738e-67
MsaG003214	MsaG040428	0.815031	1.969870e-51	3.810856e-49
MsaG003214	MsaG040670	0.818988	2.569269e-52	5.502116e-50
MsaG003214	MsaG041237	0.852186	1.043351e-60	6.100294e-58
MsaG003214	MsaG042126	0.822938	3.196901e-53	7.603508e-51
MsaG003214	MsaG042146	0.850557	2.996907e-60	1.655728e-57
MsaG003214	MsaG043297	0.817703	5.003996e-52	1.036442e-49
MsaG003214	MsaG043772	0.819727	1.746520e-52	3.813223e-50
MsaG003214	MsaG043754	0.837786	7.768035e-57	2.830400e-54
MsaG003214	MsaG043755	0.862695	8.369192e-64	7.217029e-61
MsaG003214	MsaG044663	0.856253	7.072949e-62	4.782500e-59
MsaG003214	MsaG044664	0.837427	9.593912e-57	3.457567e-54
MsaG003214	MsaG044688	0.826521	4.616126e-54	1.211178e-51
MsaG003214	MsaG044928	0.838444	5.270192e-57	1.959650e-54
MsaG003214	MsaG045015	0.802413	9.534898e-49	1.361683e-46
MsaG003214	MsaG045385	0.907772	8.434573e-81	6.906650e-77
MsaG003214	MsaG045452	0.824448	1.421781e-53	3.523038e-51
MsaG003214	MsaG045598	0.853499	4.414988e-61	2.703505e-58
MsaG003214	MsaG045677	0.803815	4.906947e-49	7.237451e-47
MsaG003214	MsaG045824	0.843101	3.213138e-58	1.384182e-55
MsaG003214	MsaG045856	0.802454	9.353335e-49	1.336994e-46
MsaG003214	MsaG046001	0.805924	1.787240e-49	2.768532e-47
MsaG003214	MsaG046029	0.844828	1.112412e-58	5.068762e-56
MsaG003214	MsaG046193	0.861863	1.504084e-63	1.255553e-60
MsaG003214	MsaG046216	0.810258	2.155789e-50	3.704709e-48
MsaG003214	MsaG046367	0.823849	1.962738e-53	4.784794e-51
MsaG003214	MsaG046471	0.867670	2.325462e-65	2.447392e-62
MsaG003214	MsaG046695	0.848417	1.176121e-59	6.039396e-57
MsaG003214	MsaG046770	0.806796	1.172598e-49	1.854278e-47
MsaG003214	MsaG046927	0.884900	2.778129e-71	6.332062e-68
MsaG003214	MsaG047049	0.862717	8.241820e-64	7.113371e-61
MsaG003214	MsaG002654	0.800473	2.371366e-48	3.240625e-46
MsaG003214	MsaG001694	0.850024	4.220487e-60	2.289149e-57
MsaG003214	MsaG002349	0.830483	5.152587e-55	1.511814e-52
MsaG003214	MsaG008957	0.833955	7.194702e-56	2.335746e-53
MsaG003214	MsaG008488	0.806240	1.534203e-49	2.394537e-47
MsaG003214	MsaG009512	0.812306	7.787023e-51	1.407042e-48
MsaG003214	MsaG014699	0.811180	1.364864e-50	2.398916e-48
MsaG003214	MsaG011732	0.846823	3.213144e-59	1.564126e-56
MsaG003214	MsaG013590	0.844724	1.185840e-58	5.384577e-56
MsaG003214	MsaG011495	0.800104	2.816655e-48	3.817195e-46
MsaG003214	MsaG014695	0.838094	6.480156e-57	2.383592e-54
MsaG003214	MsaG011676	0.823199	2.781219e-53	6.661659e-51
MsaG003214	MsaG013526	0.839167	3.433453e-57	1.305760e-54
MsaG003214	MsaG012695	0.822993	3.104461e-53	7.394640e-51
MsaG003214	MsaG019142	0.800287	2.585480e-48	3.518376e-46
MsaG003214	MsaG022889	0.825504	8.031296e-54	2.048480e-51
MsaG003214	MsaG023461	0.862408	1.025011e-63	8.740487e-61
MsaG003214	MsaG022828	0.801934	1.195104e-48	1.688125e-46
MsaG003214	MsaG028289	0.853461	4.526755e-61	2.768326e-58
MsaG003214	MsaG028903	0.868182	1.594305e-65	1.713485e-62
MsaG003214	MsaG027475	0.817053	6.998584e-52	1.425593e-49
MsaG003214	MsaG031488	0.860773	3.219914e-63	2.578629e-60
MsaG003214	MsaG032886	0.816472	9.434714e-52	1.893211e-49
MsaG003214	MsaG032931	0.853924	3.335453e-61	2.073647e-58
MsaG003214	MsaG032384	0.826566	4.503020e-54	1.182975e-51
MsaG003214	MsaG032525	0.852740	7.264230e-61	4.330646e-58
MsaG003214	MsaG034581	0.817434	5.751523e-52	1.183108e-49
MsaG003214	MsaG031976	0.868422	1.335456e-65	1.449587e-62
MsaG003214	MsaG034730	0.845126	9.246023e-59	4.254256e-56
MsaG003214	MsaG033321	0.811740	1.033063e-50	1.840828e-48
MsaG003214	MsaG030553	0.825515	7.983706e-54	2.037016e-51
MsaG003214	MsaG033065	0.814715	2.312415e-51	4.437971e-49
MsaG003214	MsaG033344	0.853726	3.800900e-61	2.346393e-58
MsaG003214	MsaG031710	0.804520	3.505540e-49	5.255654e-47
MsaG003214	MsaG036053	0.808327	5.569783e-50	9.135359e-48
MsaG003214	MsaG035322	0.896097	1.154542e-75	4.724391e-72
MsaG003214	MsaG035294	0.807476	8.432055e-50	1.355024e-47
MsaG003214	MsaG036205	0.800148	2.759690e-48	3.743666e-46
MsaG003214	MsaG041378	0.810150	2.273940e-50	3.897408e-48
MsaG003214	MsaG042585	0.818106	4.062954e-52	8.503627e-50
MsaG003214	MsaG043047	0.822818	3.408556e-53	8.080765e-51

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG003214	MtrunA17_Chr1g0182791	92.871	533	25	4	1	530	12	534	0.0	972
MsaG003214	MtrunA17_Chr7g0262691	62.575	334	89	11	197	518	146	455	1.17e-111	340
MsaG003214	MtrunA17_Chr3g0095391	30.874	515	249	19	20	504	27	464	1.39e-49	177
MsaG003214	MtrunA17_Chr1g0193321	59.060	149	56	2	252	395	398	546	2.37e-42	161
MsaG003214	MtrunA17_Chr7g0271251	50.289	173	73	3	257	416	373	545	1.01e-35	141
MsaG003214	MtrunA17_Chr1g0153241	67.949	78	23	1	313	388	85	162	1.29e-26	108
MsaG003214	MtrunA17_Chr7g0270871	59.000	100	36	2	284	378	168	267	4.84e-25	106
MsaG003214	MtrunA17_Chr5g0402031	74.627	67	15	1	322	386	114	180	3.09e-24	103
MsaG003214	MtrunA17_Chr7g0231461	57.500	80	34	0	297	376	281	360	1.42e-22	100
MsaG003214	MtrunA17_Chr4g0074161	53.165	79	33	1	308	382	201	279	2.34e-18	87.4
MsaG003214	MtrunA17_Chr1g0190731	57.143	63	27	0	315	377	195	257	2.74e-17	83.6
MsaG003214	MtrunA17_Chr3g0144641	36.923	130	72	5	315	436	193	320	5.29e-16	80.1
MsaG003214	MtrunA17_Chr1g0152131	40.000	115	55	5	315	421	262	370	1.18e-15	79.3
MsaG003214	MtrunA17_Chr8g0363921	46.341	82	42	2	315	394	153	234	6.20e-15	75.5
MsaG003214	MtrunA17_Chr7g0234761	50.725	69	33	1	315	382	319	387	1.46e-14	76.3
MsaG003214	MtrunA17_Chr5g0415291	45.122	82	43	2	315	394	114	195	1.71e-14	73.2
MsaG003214	MtrunA17_Chr3g0131771	49.315	73	36	1	315	386	149	221	1.73e-14	74.7
MsaG003214	MtrunA17_Chr8g0339091	30.769	195	97	6	203	377	180	356	1.78e-14	75.9
MsaG003214	MtrunA17_Chr4g0035101	54.688	64	28	1	315	377	145	208	1.98e-14	74.7
MsaG003214	MtrunA17_Chr5g0421111	50.667	75	33	2	304	377	359	430	3.05e-14	75.5
MsaG003214	MtrunA17_Chr8g0365941	54.688	64	28	1	315	377	307	370	3.82e-14	74.7
MsaG003214	MtrunA17_Chr8g0385911	45.946	74	38	2	315	386	147	220	7.55e-14	72.8
MsaG003214	MtrunA17_Chr1g0174161	39.773	88	51	2	315	400	162	249	8.35e-14	72.8
MsaG003214	MtrunA17_Chr5g0393721	33.333	114	65	1	311	424	222	324	9.40e-14	72.4
MsaG003214	MtrunA17_Chr1g0207311	34.286	105	55	2	307	406	185	280	3.52e-13	70.1
MsaG003214	MtrunA17_Chr3g0134741	32.727	110	59	2	311	420	227	321	5.86e-13	70.1
MsaG003214	MtrunA17_Chr6g0484271	45.570	79	41	2	301	377	142	220	1.13e-12	68.6
MsaG003214	MtrunA17_Chr7g0258161	37.037	108	65	3	315	419	175	282	3.91e-12	67.8
MsaG003214	MtrunA17_Chr1g0152651	45.455	66	36	0	311	376	272	337	5.25e-12	67.4
MsaG003214	MtrunA17_Chr1g0207301	31.313	99	59	1	310	408	285	374	5.01e-11	64.7
MsaG003214	MtrunA17_Chr1g0184841	48.611	72	33	1	315	382	122	193	7.69e-11	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG003214	AT2G20180.4	41.502	506	182	24	19	504	35	446	1.05e-75	247
MsaG003214	AT2G20180.6	41.502	506	182	24	19	504	35	446	1.05e-75	247
MsaG003214	AT2G20180.2	41.502	506	182	24	19	504	35	446	1.05e-75	247
MsaG003214	AT2G20180.3	41.502	506	182	24	19	504	35	446	1.05e-75	247
MsaG003214	AT2G20180.7	42.222	450	156	21	75	504	10	375	1.52e-66	221
MsaG003214	AT2G20180.1	42.222	450	156	21	75	504	10	375	1.52e-66	221
MsaG003214	AT2G20180.5	42.222	450	156	21	75	504	10	375	1.52e-66	221
MsaG003214	AT4G28800.1	32.179	491	228	16	18	499	17	411	2.37e-54	190
MsaG003214	AT2G20180.8	39.850	399	148	20	1	374	8	339	6.94e-54	186
MsaG003214	AT4G28800.2	31.440	493	229	16	15	499	26	417	1.31e-50	180
MsaG003214	AT4G28790.1	33.806	423	199	14	12	420	16	371	3.16e-46	167
MsaG003214	AT4G28811.1	33.849	517	241	20	20	521	108	538	2.91e-40	153
MsaG003214	AT1G09530.3	32.861	423	207	12	21	397	27	418	1.71e-39	151
MsaG003214	AT1G09530.2	32.861	423	207	12	21	397	27	418	1.71e-39	151
MsaG003214	AT1G09530.5	32.861	423	207	12	21	397	27	418	1.71e-39	151
MsaG003214	AT1G09530.1	32.861	423	207	12	21	397	27	418	1.71e-39	151
MsaG003214	AT1G09530.4	32.861	423	207	12	21	397	27	418	1.71e-39	151
MsaG003214	AT1G09530.6	32.861	423	207	12	21	397	27	418	1.71e-39	151
MsaG003214	AT4G28790.2	32.075	371	188	10	12	373	16	331	3.06e-35	135
MsaG003214	AT4G28815.2	40.306	196	65	7	310	505	65	208	2.54e-31	121
MsaG003214	AT4G28815.1	40.306	196	65	7	310	505	141	284	2.26e-30	120
MsaG003214	AT2G46970.2	50.735	136	53	3	280	409	155	282	6.90e-30	121
MsaG003214	AT2G46970.3	50.735	136	53	3	280	409	164	291	8.58e-30	121
MsaG003214	AT2G46970.1	50.735	136	53	3	280	409	186	313	9.40e-30	121
MsaG003214	AT3G59060.3	41.202	233	110	7	280	492	211	436	7.73e-29	119
MsaG003214	AT3G59060.2	41.202	233	110	7	280	492	211	436	7.73e-29	119
MsaG003214	AT3G59060.4	41.202	233	110	7	280	492	211	436	7.73e-29	119
MsaG003214	AT3G59060.1	53.901	141	49	4	280	404	211	351	1.66e-28	118
MsaG003214	AT4G36930.1	73.611	72	17	1	319	388	197	268	9.60e-26	109
MsaG003214	AT5G67110.1	65.385	78	25	1	314	389	88	165	1.91e-25	104
MsaG003214	AT2G43010.4	65.263	95	25	2	307	393	245	339	1.24e-24	106
MsaG003214	AT2G43010.2	65.263	95	25	2	307	393	245	339	1.57e-24	106
MsaG003214	AT2G43010.1	65.263	95	25	2	307	393	245	339	1.64e-24	106
MsaG003214	AT2G43010.3	65.263	95	25	2	307	393	252	346	2.04e-24	106
MsaG003214	AT2G43010.5	57.377	122	38	4	281	393	265	381	3.25e-24	106
MsaG003214	AT4G00050.2	65.385	78	25	1	301	376	91	168	3.67e-23	100
MsaG003214	AT4G00050.3	65.385	78	25	1	301	376	193	270	9.14e-23	100
MsaG003214	AT4G00050.1	65.385	78	25	1	301	376	193	270	1.04e-22	100
MsaG003214	AT2G24260.2	58.571	70	29	0	308	377	30	99	6.47e-20	89.7
MsaG003214	AT3G62090.1	49.485	97	44	2	315	409	167	260	2.18e-19	90.1
MsaG003214	AT2G24260.1	58.571	70	29	0	308	377	133	202	2.65e-19	89.7
MsaG003214	AT3G62090.2	49.485	97	44	2	315	409	184	277	3.66e-19	89.7
MsaG003214	AT4G30980.1	42.478	113	60	2	265	377	87	194	1.19e-18	87.4
MsaG003214	AT5G58010.1	60.317	63	25	0	315	377	101	163	1.95e-18	86.3
MsaG003214	AT5G50915.3	35.057	174	82	7	283	434	97	261	2.71e-18	85.5
MsaG003214	AT5G50915.4	35.057	174	82	7	283	434	97	261	2.71e-18	85.5
MsaG003214	AT4G30980.2	42.478	113	60	2	265	377	135	242	4.56e-18	86.3
MsaG003214	AT5G50915.1	35.057	174	82	7	283	434	97	261	5.40e-18	85.1
MsaG003214	AT5G50915.2	35.057	174	82	7	283	434	97	261	5.40e-18	85.1
MsaG003214	AT1G02340.1	39.130	138	71	7	327	459	141	270	8.29e-17	81.6
MsaG003214	AT1G02340.2	39.130	138	71	7	327	459	134	263	8.97e-17	81.3
MsaG003214	AT5G61270.2	39.098	133	79	2	259	389	17	149	2.79e-16	79.7
MsaG003214	AT5G61270.3	39.098	133	79	2	259	389	17	149	2.79e-16	79.7
MsaG003214	AT1G59640.1	31.016	187	109	5	216	394	45	219	2.97e-16	79.3
MsaG003214	AT5G61270.1	39.098	133	79	2	259	389	105	237	9.74e-16	79.3
MsaG003214	AT1G59640.2	38.525	122	67	3	281	394	98	219	8.04e-15	76.3
MsaG003214	AT4G34530.1	39.362	94	56	1	290	382	149	242	8.49e-15	76.3
MsaG003214	AT4G36540.1	50.725	69	33	1	315	382	143	211	1.20e-14	75.5
MsaG003214	AT4G36540.2	50.725	69	33	1	315	382	143	211	1.24e-14	75.1
MsaG003214	AT1G10120.2	50.725	69	33	1	315	382	208	276	1.80e-14	75.5
MsaG003214	AT1G10120.1	50.725	69	33	1	315	382	208	276	1.80e-14	75.5
MsaG003214	AT1G68920.1	50.725	69	33	1	315	382	305	373	2.01e-14	76.3
MsaG003214	AT1G68920.4	50.725	69	33	1	315	382	305	373	2.01e-14	76.3
MsaG003214	AT1G68920.2	50.725	69	33	1	315	382	305	373	2.01e-14	76.3
MsaG003214	AT1G68920.3	50.725	69	33	1	315	382	304	372	2.02e-14	76.3
MsaG003214	AT3G07340.2	37.008	127	57	4	279	382	202	328	2.35e-14	75.9
MsaG003214	AT3G07340.1	37.008	127	57	4	279	382	202	328	2.38e-14	75.9
MsaG003214	AT5G62610.2	50.725	69	33	1	315	382	155	223	2.60e-14	73.9
MsaG003214	AT5G62610.1	50.725	69	33	1	315	382	155	223	2.60e-14	73.9
MsaG003214	AT5G48560.2	54.688	64	28	1	315	377	303	366	2.76e-14	75.5
MsaG003214	AT5G48560.1	54.688	64	28	1	315	377	303	366	3.35e-14	75.5
MsaG003214	AT2G18300.2	47.826	69	35	1	315	382	187	255	7.62e-14	73.2
MsaG003214	AT2G18300.1	47.826	69	35	1	315	382	187	255	7.77e-14	73.2
MsaG003214	AT3G23690.1	47.826	69	35	1	315	382	193	261	9.19e-14	73.6
MsaG003214	AT1G26260.3	47.826	69	35	1	315	382	174	242	1.18e-13	72.8
MsaG003214	AT2G18300.3	47.826	69	35	1	315	382	187	255	1.19e-13	73.2
MsaG003214	AT1G26260.5	51.562	64	30	1	315	377	203	266	1.26e-13	73.2
MsaG003214	AT2G14760.1	36.735	98	53	1	311	408	235	323	1.28e-13	72.4
MsaG003214	AT1G26260.4	51.562	64	30	1	315	377	225	288	1.43e-13	72.8
MsaG003214	AT1G26260.1	51.562	64	30	1	315	377	225	288	1.43e-13	72.8
MsaG003214	AT1G26260.6	51.562	64	30	1	315	377	225	288	1.43e-13	72.8
MsaG003214	AT1G26260.2	51.562	64	30	1	315	377	225	288	1.43e-13	72.8
MsaG003214	AT1G25330.1	50.000	64	31	1	315	377	106	169	2.20e-13	70.1
MsaG003214	AT1G73830.2	48.438	64	32	1	315	377	149	212	4.15e-13	70.1
MsaG003214	AT1G73830.1	48.438	64	32	1	315	377	149	212	4.53e-13	70.1
MsaG003214	AT4G33880.1	38.298	94	49	1	311	404	264	348	5.49e-13	70.9
MsaG003214	AT4G28790.6	27.217	327	174	10	12	329	16	287	5.61e-13	70.1
MsaG003214	AT4G28790.3	27.217	327	174	10	12	329	16	287	5.61e-13	70.1
MsaG003214	AT4G28790.4	27.217	327	174	10	12	329	16	287	5.61e-13	70.1
MsaG003214	AT1G18400.2	48.438	64	32	1	315	377	147	210	6.29e-13	69.3
MsaG003214	AT1G18400.1	48.438	64	32	1	315	377	147	210	7.90e-13	69.3
MsaG003214	AT3G57800.2	51.562	64	30	1	315	377	206	269	9.11e-13	70.5
MsaG003214	AT2G42300.4	46.377	69	36	1	315	382	187	255	9.18e-13	69.3
MsaG003214	AT1G27740.1	44.776	67	37	0	310	376	164	230	1.25e-12	68.6
MsaG003214	AT2G42300.1	46.377	69	36	1	315	382	187	255	1.41e-12	69.3
MsaG003214	AT5G43175.1	36.667	90	48	1	315	404	134	214	3.66e-12	66.6
MsaG003214	AT1G68240.1	42.857	84	47	1	305	387	53	136	9.84e-12	64.3
MsaG003214	AT2G14760.3	34.021	97	55	1	312	408	249	336	1.01e-11	67.0
MsaG003214	AT1G68240.2	42.857	84	47	1	305	387	53	136	1.40e-11	63.5

Find 160 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCTAAATTGGCGGTGGTTT+TGG	0.202001	1:+53488860	None:intergenic
ATGGGGATGGGAATGGGTTT+GGG	0.224071	1:-53483298	MsaT003214.1:CDS
GCAACTGTAGCTGGTCCTTT+TGG	0.266955	1:-53483196	MsaT003214.1:CDS
AATGGGGATGGGAATGGGTT+TGG	0.291782	1:-53483299	MsaT003214.1:CDS
CGGCAGGGGTGGCGGCTTCT+CGG	0.320550	1:-53488540	MsaT003214.1:CDS
GGAGAATTAGGCAACATATT+AGG	0.325301	1:+53483232	None:intergenic
GCAGAGAACCAAGGGAGTTA+AGG	0.325749	1:+53483077	None:intergenic
GGTTTCTTTGAATGATGTAT+AGG	0.327763	1:+53489047	None:intergenic
GCTGCTGGCAAAGGAGAATT+AGG	0.328372	1:+53483220	None:intergenic
AATGGGTTTGGGGATGGAAA+TGG	0.337352	1:-53483287	MsaT003214.1:CDS
CTCTGAAACTCAGATTCTTC+CGG	0.349431	1:+53488106	None:intergenic
GTTTCTTTGAATGATGTATA+GGG	0.365818	1:+53489048	None:intergenic
ATCCAACATTGAAGCTTTGT+CGG	0.371400	1:+53484902	None:intergenic
GTACGCTGCTTCGAGATTAT+CGG	0.371790	1:-53488299	MsaT003214.1:CDS
CTGCAGGAACATGGGGCATA+TGG	0.374715	1:+53483149	None:intergenic
GCTTGCATTCTGGATGAATC+AGG	0.377153	1:+53483121	None:intergenic
TGGTAAGGATCTGTGAAGTT+TGG	0.382377	1:+53483028	None:intergenic
GGTAAGGATCTGTGAAGTTT+GGG	0.385109	1:+53483029	None:intergenic
TGGGGATGGGAATGGGTTTG+GGG	0.392381	1:-53483297	MsaT003214.1:CDS
CAGAGAACCAAGGGAGTTAA+GGG	0.393263	1:+53483078	None:intergenic
ATGGGTTTGGGGATGGAAAT+GGG	0.400144	1:-53483286	MsaT003214.1:CDS
TTTATGCCGGCGATGGGAAT+GGG	0.402200	1:-53483316	MsaT003214.1:CDS
GGATCTGTGAAGTTTGGGTT+TGG	0.408214	1:+53483034	None:intergenic
ATGGGAATGGGGATGGGAAT+GGG	0.415003	1:-53483304	MsaT003214.1:CDS
GGCATAAATTGCTGAATTCC+AGG	0.416047	1:+53483331	None:intergenic
TTCTAGCGGGAGTGCTGAAC+CGG	0.418643	1:-53488173	MsaT003214.1:CDS
CTGGCGGTGGTTGTAGTTGC+CGG	0.419365	1:+53488826	None:intergenic
AGGAGCGCGACGGCGGAGAC+TGG	0.419387	1:-53488268	MsaT003214.1:CDS
CGAGATTATCGGAAACGATC+AGG	0.421871	1:-53488288	MsaT003214.1:CDS
GAAAAGGAAGGGACGTGAAC+CGG	0.422354	1:-53488125	MsaT003214.1:CDS
GTTCATGCAAGAAGATGAAA+TGG	0.432145	1:-53488737	MsaT003214.1:CDS
GATTCATCCGGCGAGGAAAC+CGG	0.433202	1:-53488512	MsaT003214.1:CDS
CATTCATCAGTCGGAAGCGC+CGG	0.433679	1:-53488634	MsaT003214.1:CDS
GATGGGAATGGGTTTGGGGA+TGG	0.434675	1:-53483293	MsaT003214.1:CDS
TGGATTATCTTGGCTCCCAC+TGG	0.435044	1:+53481913	None:intergenic
AACGAGACCGGCAGGGGTGG+CGG	0.437941	1:-53488548	MsaT003214.1:CDS
TTTGGAATGCGTGATTGATC+TGG	0.440584	1:+53483052	None:intergenic
TTAGGCAACATATTAGGAAA+TGG	0.443474	1:+53483238	None:intergenic
GGTGGGGACCGAGGTATTGC+TGG	0.446521	1:+53483008	None:intergenic
GGTTTCCTCGCCGGATGAAT+CGG	0.451246	1:+53488514	None:intergenic
GATGGGAATGGGGATGGGAA+TGG	0.451351	1:-53483305	MsaT003214.1:CDS
TCTTGGCTCCCACTGGTACC+TGG	0.452130	1:+53481920	None:intergenic
TAGAACACAGAAACCGGATA+TGG	0.455584	1:-53488476	MsaT003214.1:CDS
CGAGAAGCCGCCACCCCTGC+CGG	0.456524	1:+53488541	None:intergenic
CAGAATGATAATTACGTGAA+AGG	0.456561	1:+53489026	None:intergenic
GTCATTGCAGTTACAAGTGC+AGG	0.457289	1:-53484859	MsaT003214.1:intron
CAGGTGCAGCTGCAGGAACA+TGG	0.457934	1:+53483140	None:intergenic
TTGGGGATGGAAATGGGAAT+GGG	0.462048	1:-53483280	MsaT003214.1:CDS
CGTCGCCTGGTTGTTCTAGC+GGG	0.462418	1:-53488186	MsaT003214.1:CDS
ATTTATGCCGGCGATGGGAA+TGG	0.464029	1:-53483317	MsaT003214.1:CDS
GGTGAATAGAACACAGAAAC+CGG	0.465326	1:-53488482	MsaT003214.1:CDS
ATGATACCTATGATGTTTCC+TGG	0.467201	1:-53483349	MsaT003214.1:CDS
GTTCTATTCACCACCATATC+CGG	0.470011	1:+53488463	None:intergenic
CCAGCAGCAGCAACTGTAGC+TGG	0.470668	1:-53483205	MsaT003214.1:CDS
CCAGCTACAGTTGCTGCTGC+TGG	0.475321	1:+53483205	None:intergenic
GTTCACTTCTCGCATTACTT+TGG	0.477874	1:+53488410	None:intergenic
CTTTATGCAGATGATGTCCA+TGG	0.478571	1:-53483380	MsaT003214.1:intron
GATCGAATCTCTCTATGATC+AGG	0.479842	1:+53488793	None:intergenic
CATTAATTGCTGCACCTGGT+GGG	0.482274	1:+53482991	None:intergenic
TCAGCAATTTATGCCGGCGA+TGG	0.482673	1:-53483323	MsaT003214.1:CDS
GTTCAGCAAACGAGACCGGC+AGG	0.485745	1:-53488556	MsaT003214.1:CDS
CCTGCATTAATTGCTGCACC+TGG	0.485944	1:+53482987	None:intergenic
AACCGGAGTTGGACCGGAAA+AGG	0.489470	1:-53488141	MsaT003214.1:CDS
ATATTAGGAAATGGCATCAC+TGG	0.491333	1:+53483247	None:intergenic
TGAATTCCAGGAAACATCAT+AGG	0.491738	1:+53483343	None:intergenic
GCCGGCGATGGGAATGGGGA+TGG	0.493972	1:-53483311	MsaT003214.1:CDS
CCCATCCCCATTCCCATCGC+CGG	0.494774	1:+53483310	None:intergenic
GTTTGTTCAGCAAACGAGAC+CGG	0.495146	1:-53488560	MsaT003214.1:CDS
ATGACAGTTACGTCGTCGCC+TGG	0.498022	1:-53488199	MsaT003214.1:CDS
CCGGCGATGGGAATGGGGAT+GGG	0.499606	1:-53483310	MsaT003214.1:CDS
AACTCCGGTTCTCTATGAAC+CGG	0.499849	1:+53488154	None:intergenic
ACAGTTGCTGCTGCTGGCAA+AGG	0.505523	1:+53483211	None:intergenic
GATGAATCAGGTGCAGCTGC+AGG	0.505773	1:+53483133	None:intergenic
TTTGGGGATGGAAATGGGAA+TGG	0.506305	1:-53483281	MsaT003214.1:CDS
GTTGTAGTTGCCGGTGCCGA+CGG	0.507949	1:+53488835	None:intergenic
ACCATCTCCGGTTTCCTCGC+CGG	0.508019	1:+53488505	None:intergenic
GTTCTATTCACCACCATCTC+CGG	0.514131	1:+53488493	None:intergenic
GGACCGAGGTATTGCTGGTA+AGG	0.515019	1:+53483013	None:intergenic
TGCGTGTGTGTGAGCACCAC+CGG	0.519164	1:-53488244	MsaT003214.1:CDS
AGGAATCACGCGACTGGCGG+TGG	0.519980	1:+53488813	None:intergenic
TGGAATTCAGCAATTTATGC+CGG	0.522421	1:-53483329	MsaT003214.1:CDS
CTGAAATCGTGACGGTTGAA+AGG	0.522705	1:+53488673	None:intergenic
ATTTAGAAAACCGTCGGCAC+CGG	0.522972	1:-53488845	MsaT003214.1:CDS
ATAGCGAACCTTGGTCCAAA+AGG	0.525545	1:+53483181	None:intergenic
GCAACAAGACGATGAGATCA+TGG	0.527589	1:-53488920	MsaT003214.1:CDS
TTCTCGGCCTCCGATTCATC+CGG	0.528261	1:-53488524	MsaT003214.1:CDS
AGGTGCAGCTGCAGGAACAT+GGG	0.528619	1:+53483141	None:intergenic
ATGGAACTATTGTGGCAAAA+CGG	0.535259	1:-53488901	MsaT003214.1:CDS
ATAGAGAACCGGAGTTGGAC+CGG	0.535858	1:-53488147	MsaT003214.1:CDS
GTCAACAGACCAGGTACCAG+TGG	0.537139	1:-53481929	MsaT003214.1:CDS
CAGCAATTTATGCCGGCGAT+GGG	0.537150	1:-53483322	MsaT003214.1:CDS
AACACCGCCGTGTTTCTGAC+CGG	0.541272	1:+53488615	None:intergenic
TCAGCAAACGAGACCGGCAG+GGG	0.544570	1:-53488554	MsaT003214.1:CDS
GCAATACCTCGGTCCCCACC+AGG	0.546189	1:-53483005	MsaT003214.1:CDS
AACGATCAGGAGCGCGACGG+CGG	0.546234	1:-53488275	MsaT003214.1:CDS
ATTCATGTAGTTATCTGCAT+CGG	0.548506	1:+53488768	None:intergenic
GTCCGACAAAGCTTCAATGT+TGG	0.553364	1:-53484904	MsaT003214.1:CDS
ATTAATTGCTGCACCTGGTG+GGG	0.553799	1:+53482992	None:intergenic
ATCTGGAGGCAGAGAACCAA+GGG	0.555021	1:+53483069	None:intergenic
GCATTAATTGCTGCACCTGG+TGG	0.556345	1:+53482990	None:intergenic
ATTATGAACCTCTGCAGCAC+GGG	0.558566	1:+53485169	None:intergenic
GCAAACGAGACCGGCAGGGG+TGG	0.560535	1:-53488551	MsaT003214.1:CDS
ATGATCAGGAATCACGCGAC+TGG	0.564484	1:+53488807	None:intergenic
TGAACCGGTTCATAGAGAAC+CGG	0.564686	1:-53488158	MsaT003214.1:CDS
AGGTATCATGCCACATCCCA+TGG	0.569792	1:+53483363	None:intergenic
GGAACATGGGGCATATGGAA+AGG	0.576243	1:+53483154	None:intergenic
AAAGAGATCCCGTGCTGCAG+AGG	0.580112	1:-53485177	MsaT003214.1:CDS
AAACTCCGACTCACGTTCCG+TGG	0.580438	1:+53488579	None:intergenic
TTATGCCGGCGATGGGAATG+GGG	0.582904	1:-53483315	MsaT003214.1:CDS
CCAGGTGCAGCAATTAATGC+AGG	0.585533	1:-53482987	MsaT003214.1:intron
GGTTCATAGAGAACCGGAGT+TGG	0.586478	1:-53488152	MsaT003214.1:CDS
GGTGCAGCTGCAGGAACATG+GGG	0.593185	1:+53483142	None:intergenic
ATGAGATCATGGAACTATTG+TGG	0.596163	1:-53488909	MsaT003214.1:CDS
ACAAGCCACGGAACGTGAGT+CGG	0.600009	1:-53488584	MsaT003214.1:CDS
CAGATGATGTCCATGGGATG+TGG	0.601497	1:-53483373	MsaT003214.1:CDS
ATCGAACTCGAAGATGCACC+TGG	0.602615	1:+53488388	None:intergenic
TTCAGCAAACGAGACCGGCA+GGG	0.603612	1:-53488555	MsaT003214.1:CDS
GGCGAGGAAACCGGAGATGG+TGG	0.604411	1:-53488503	MsaT003214.1:CDS
TGCAGCGGCAAGAGAATCGA+CGG	0.605167	1:-53488362	MsaT003214.1:CDS
AGAGAACCAAGGGAGTTAAG+GGG	0.605857	1:+53483079	None:intergenic
GCTGCACCTGGTGGGGACCG+AGG	0.609026	1:+53482999	None:intergenic
TCCGGCGAGGAAACCGGAGA+TGG	0.609760	1:-53488506	MsaT003214.1:CDS
TTTATGCAGATGATGTCCAT+GGG	0.610157	1:-53483379	MsaT003214.1:intron
GATTATGAACCTCTGCAGCA+CGG	0.610880	1:+53485168	None:intergenic
CGGAAAAGCTGCGACGACGT+TGG	0.612425	1:-53488224	MsaT003214.1:CDS
TTCCTCGCCGGATGAATCGG+AGG	0.613809	1:+53488517	None:intergenic
AGTAATGCGAGAAGTGAACC+AGG	0.615012	1:-53488406	MsaT003214.1:CDS
AAAGGAGGCATAGCGAACCT+TGG	0.615246	1:+53483172	None:intergenic
GGAGTTGGACCGGAAAAGGA+AGG	0.615583	1:-53488137	MsaT003214.1:CDS
AACACAGAAACCGGATATGG+TGG	0.616872	1:-53488473	MsaT003214.1:CDS
TGTTATACAAGCACAAGCCA+CGG	0.625309	1:-53488596	MsaT003214.1:CDS
GGTTCATAATCTCTCAGAGA+GGG	0.625587	1:-53485156	MsaT003214.1:intron
CAGCAAAATGTCAACAGACC+AGG	0.626812	1:-53481938	MsaT003214.1:CDS
ACTTATACCGCGGTGCAACA+AGG	0.628814	1:-53485012	MsaT003214.1:intron
GAGAACCAAGGGAGTTAAGG+GGG	0.629551	1:+53483080	None:intergenic
TCGTCGCCTGGTTGTTCTAG+CGG	0.629552	1:-53488187	MsaT003214.1:CDS
GAGTTGGACCGGAAAAGGAA+GGG	0.631011	1:-53488136	MsaT003214.1:CDS
AGAATCTGAGTTTCAGAGCG+AGG	0.634691	1:-53488101	MsaT003214.1:intron
GGAAGCGCCGGTCAGAAACA+CGG	0.635704	1:-53488622	MsaT003214.1:CDS
GGAATGCGTGATTGATCTGG+AGG	0.645810	1:+53483055	None:intergenic
ATCAGGAATCACGCGACTGG+CGG	0.647878	1:+53488810	None:intergenic
AAATCGTGACGGTTGAAAGG+AGG	0.650313	1:+53488676	None:intergenic
CTTTGCAAGAACTTATACCG+CGG	0.653949	1:-53485022	MsaT003214.1:CDS
GGCCTCCGATTCATCCGGCG+AGG	0.655663	1:-53488519	MsaT003214.1:CDS
ACATGGGGCATATGGAAAGG+AGG	0.660166	1:+53483157	None:intergenic
GGAAACGATCAGGAGCGCGA+CGG	0.663906	1:-53488278	MsaT003214.1:CDS
TTCGAGTTCGATGATTGCAG+CGG	0.665279	1:-53488377	MsaT003214.1:CDS
GATCCTTACCAGCAATACCT+CGG	0.665739	1:-53483016	MsaT003214.1:CDS
GATCTGGAGGCAGAGAACCA+AGG	0.671898	1:+53483068	None:intergenic
GCACTCCCGCTAGAACAACC+AGG	0.673024	1:+53488181	None:intergenic
CCGCCAATTTAGAAAACCGT+CGG	0.675021	1:-53488851	MsaT003214.1:CDS
TCTTTGCAGATGTAGATCCA+CGG	0.678173	1:+53485195	None:intergenic
GGTAGATTCATGTGATACGC+CGG	0.678374	1:-53488338	MsaT003214.1:CDS
TCAACAGACCAGGTACCAGT+GGG	0.681572	1:-53481928	MsaT003214.1:CDS
TGTTTCACCTTGTTGCACCG+CGG	0.687099	1:+53485005	None:intergenic
AAGAAGATGAAATGGCATCG+TGG	0.726842	1:-53488729	MsaT003214.1:CDS
TTTCTGAACTGAAATCGTGA+CGG	0.732941	1:+53488665	None:intergenic
AGGTTCATAATCTCTCAGAG+AGG	0.750433	1:-53485157	MsaT003214.1:CDS
AGCGGCAAGAGAATCGACGG+TGG	0.788837	1:-53488359	MsaT003214.1:CDS
AGCGCCGGTCAGAAACACGG+CGG	0.810141	1:-53488619	MsaT003214.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	53481901	53489090	53481901	ID=MsaG003214
Chr1	mRNA	53481901	53489090	53481901	ID=MsaT003214.1;Parent=MsaG003214
Chr1	exon	53481901	53481969	53481901	ID=MsaT003214.1.exon7;Parent=MsaT003214.1
Chr1	CDS	53481901	53481969	53481901	ID=cds.MsaT003214.1;Parent=MsaT003214.1
Chr1	exon	53482988	53483392	53482988	ID=MsaT003214.1.exon6;Parent=MsaT003214.1
Chr1	CDS	53482988	53483392	53482988	ID=cds.MsaT003214.1;Parent=MsaT003214.1
Chr1	exon	53484860	53484925	53484860	ID=MsaT003214.1.exon5;Parent=MsaT003214.1
Chr1	CDS	53484860	53484925	53484860	ID=cds.MsaT003214.1;Parent=MsaT003214.1
Chr1	exon	53485013	53485078	53485013	ID=MsaT003214.1.exon4;Parent=MsaT003214.1
Chr1	CDS	53485013	53485078	53485013	ID=cds.MsaT003214.1;Parent=MsaT003214.1
Chr1	exon	53485157	53485252	53485157	ID=MsaT003214.1.exon3;Parent=MsaT003214.1
Chr1	CDS	53485157	53485252	53485157	ID=cds.MsaT003214.1;Parent=MsaT003214.1
Chr1	exon	53488102	53488942	53488102	ID=MsaT003214.1.exon2;Parent=MsaT003214.1
Chr1	CDS	53488102	53488942	53488102	ID=cds.MsaT003214.1;Parent=MsaT003214.1
Chr1	exon	53489041	53489090	53489041	ID=MsaT003214.1.exon1;Parent=MsaT003214.1
Chr1	CDS	53489041	53489090	53489041	ID=cds.MsaT003214.1;Parent=MsaT003214.1

Gene Sequence

>MsaT003214.1

ATGGATGATGAAGAAGAATACCCTATACATCATTCAAAGAAACCTTTCACGCAACAAGACGATGAGATCATGGAACTATTGTGGCAAAACGGACAAGTTGTGATGCAAAGCCAAAACCACCGCCAATTTAGAAAACCGTCGGCACCGGCAACTACAACCACCGCCAGTCGCGTGATTCCTGATCATAGAGAGATTCGATCAACCGATGCAGATAACTACATGAATCAACACTTGTTCATGCAAGAAGATGAAATGGCATCGTGGCTTTTTGATTCAATGAATGAAGTTGAAGATCCTCCTTTCAACCGTCACGATTTCAGTTCAGAAACACTTTTTCATTCATCAGTCGGAAGCGCCGGTCAGAAACACGGCGGTGTTATACAAGCACAAGCCACGGAACGTGAGTCGGAGTTTGTTCAGCAAACGAGACCGGCAGGGGTGGCGGCTTCTCGGCCTCCGATTCATCCGGCGAGGAAACCGGAGATGGTGGTGAATAGAACACAGAAACCGGATATGGTGGTGAATAGAACACAGAATTTCGCGCATTTTACTGATACTAACCAAAGTAATGCGAGAAGTGAACCAGGTGCATCTTCGAGTTCGATGATTGCAGCGGCAAGAGAATCGACGGTGGTAGATTCATGTGATACGCCGGTCATGACAGCAAAAACGTACGCTGCTTCGAGATTATCGGAAACGATCAGGAGCGCGACGGCGGAGACTGGATGCGTGTGTGTGAGCACCACCGGAAAAGCTGCGACGACGTTGGATATGACAGTTACGTCGTCGCCTGGTTGTTCTAGCGGGAGTGCTGAACCGGTTCATAGAGAACCGGAGTTGGACCGGAAAAGGAAGGGACGTGAACCGGAAGAATCTGAGTTTCAGAGCGAGGATGTCGATTTTGAATGTCGGGAAGAAAAACAACACCGTGGATCTACATCTGCAAAGAGATCCCGTGCTGCAGAGGTTCATAATCTCTCAGAGAGGAAGCGTCGAGATAGAATTAACGAAAAGATGAAAGCTTTGCAAGAACTTATACCGCGGTGCAACAAGTCCGACAAAGCTTCAATGTTGGATGAAGCAATTGAGTACTTGAAGTCATTGCAGTTACAAGTGCAGATGATGTCCATGGGATGTGGCATGATACCTATGATGTTTCCTGGAATTCAGCAATTTATGCCGGCGATGGGAATGGGGATGGGAATGGGTTTGGGGATGGAAATGGGAATGGGAATGAACAGACCAGTGATGCCATTTCCTAATATGTTGCCTAATTCTCCTTTGCCAGCAGCAGCAACTGTAGCTGGTCCTTTTGGACCAAGGTTCGCTATGCCTCCTTTCCATATGCCCCATGTTCCTGCAGCTGCACCTGATTCATCCAGAATGCAAGCAGAAAATCAATCAGACAACCCCCTTAACTCCCTTGGTTCTCTGCCTCCAGATCAATCACGCATTCCAAACCCAAACTTCACAGATCCTTACCAGCAATACCTCGGTCCCCACCAGGTGCAGCAATTAATGCAGGCAATGAACCAGCAAAATGTCAACAGACCAGGTACCAGTGGGAGCCAAGATAATCCAGAAAAGCATTAG

Protein sequence

>MsaT003214.1

MDDEEEYPIHHSKKPFTQQDDEIMELLWQNGQVVMQSQNHRQFRKPSAPATTTTASRVIPDHREIRSTDADNYMNQHLFMQEDEMASWLFDSMNEVEDPPFNRHDFSSETLFHSSVGSAGQKHGGVIQAQATERESEFVQQTRPAGVAASRPPIHPARKPEMVVNRTQKPDMVVNRTQNFAHFTDTNQSNARSEPGASSSSMIAAARESTVVDSCDTPVMTAKTYAASRLSETIRSATAETGCVCVSTTGKAATTLDMTVTSSPGCSSGSAEPVHREPELDRKRKGREPEESEFQSEDVDFECREEKQHRGSTSAKRSRAAEVHNLSERKRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGMIPMMFPGIQQFMPAMGMGMGMGLGMEMGMGMNRPVMPFPNMLPNSPLPAAATVAGPFGPRFAMPPFHMPHVPAAAPDSSRMQAENQSDNPLNSLGSLPPDQSRIPNPNFTDPYQQYLGPHQVQQLMQAMNQQNVNRPGTSGSQDNPEKH*