AlfalfaGEDB | MsaG003263

M. sativa ssp. caerulea / MsaG003263

KEGG: K15601
GO: GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005102 GO:0005488 GO:0005506 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006081 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0008214 GO:0009058 GO:0009719 GO:0009725 GO:0009755 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0016999 GO:0017000 GO:0017144 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0030518 GO:0030521 GO:0030522 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0032870 GO:0033169 GO:0033993 GO:0035257 GO:0035258 GO:0036211 GO:0042221 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043401 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0046184 GO:0046292 GO:0046293 GO:0046872 GO:0046914 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048545 GO:0050681 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051427 GO:0051716 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070013 GO:0070076 GO:0070887 GO:0070988 GO:0071310 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
PFAM: PF02373.25

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG003263	XP_013468437.1	93.258	890	60	0	1	890	1	890	0.0	1661

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG003263	sp\|Q9SSE9\|JMJ25_ARATH	43.492	922	399	11	27	885	35	897	0.0	713

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG003263	tr\|A0A072VKD6\|A0A072VKD6_MEDTR	93.258	890	60	0	1	890	1	890	0.0	1661

TFs/TRs:

Gene ID	Type	Classification
MsaG003263	TR	Jumonji

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000138	MsaG003263	0.835837	2.428729e-56	8.341510e-54
MsaG000260	MsaG003263	0.814972	2.029140e-51	3.919843e-49
MsaG000705	MsaG003263	0.821519	6.797339e-53	1.556310e-50
MsaG000906	MsaG003263	0.811453	1.191934e-50	2.109051e-48
MsaG000910	MsaG003263	0.853199	5.376663e-61	3.257706e-58
MsaG001045	MsaG003263	0.835627	2.743167e-56	9.362513e-54
MsaG001270	MsaG003263	0.857985	2.192840e-62	1.580295e-59
MsaG001277	MsaG003263	0.854242	2.704378e-61	1.700644e-58
MsaG002298	MsaG003263	0.828261	1.774133e-54	4.887199e-52
MsaG002597	MsaG003263	0.814280	2.883598e-51	5.474175e-49
MsaG002605	MsaG003263	0.814864	2.144387e-51	4.131070e-49
MsaG003263	MsaG003309	0.836792	1.392011e-56	4.920458e-54
MsaG003263	MsaG003806	0.843574	2.404932e-58	1.051870e-55
MsaG003263	MsaG004086	0.840611	1.449760e-57	5.769013e-55
MsaG003263	MsaG004091	0.805068	2.696677e-49	4.094792e-47
MsaG003263	MsaG004404	0.803083	6.944606e-49	1.007125e-46
MsaG003263	MsaG004737	0.808762	4.500409e-50	7.459549e-48
MsaG003263	MsaG004864	0.810108	2.321455e-50	3.974826e-48
MsaG003263	MsaG005038	0.801249	1.648778e-48	2.292960e-46
MsaG003263	MsaG005203	0.821648	6.350530e-53	1.458994e-50
MsaG003263	MsaG005226	0.823740	2.080494e-53	5.057172e-51
MsaG003263	MsaG005345	0.802854	7.741576e-49	1.116750e-46
MsaG003263	MsaG005352	0.826139	5.684930e-54	1.475909e-51
MsaG003263	MsaG005940	0.838828	4.198724e-57	1.580196e-54
MsaG003263	MsaG006284	0.810795	1.652837e-50	2.877832e-48
MsaG003263	MsaG007146	0.804124	4.234677e-49	6.291007e-47
MsaG003263	MsaG007363	0.846063	5.168386e-59	2.452896e-56
MsaG003263	MsaG007516	0.823601	2.241812e-53	5.428776e-51
MsaG003263	MsaG007607	0.806215	1.553320e-49	2.422946e-47
MsaG003263	MsaG008118	0.827605	2.547050e-54	6.888636e-52
MsaG003263	MsaG008125	0.811824	9.905090e-51	1.768708e-48
MsaG003263	MsaG008152	0.828750	1.353615e-54	3.780169e-52
MsaG003263	MsaG008616	0.835530	2.900759e-56	9.872269e-54
MsaG003263	MsaG008848	0.821334	7.499458e-53	1.708637e-50
MsaG003263	MsaG009424	0.825300	8.969576e-54	2.274980e-51
MsaG003263	MsaG009674	0.824509	1.375970e-53	3.415156e-51
MsaG003263	MsaG009874	0.818412	3.465714e-52	7.310993e-50
MsaG003263	MsaG009900	0.811480	1.176020e-50	2.082274e-48
MsaG003263	MsaG010083	0.826484	4.709171e-54	1.234364e-51
MsaG003263	MsaG010113	0.831639	2.688922e-55	8.158561e-53
MsaG003263	MsaG010363	0.836894	1.311439e-56	4.649966e-54
MsaG003263	MsaG010567	0.821138	8.316867e-53	1.885133e-50
MsaG003263	MsaG010604	0.841369	9.187733e-58	3.744739e-55
MsaG003263	MsaG010710	0.813065	5.320362e-51	9.797471e-49
MsaG003263	MsaG010767	0.827033	3.487391e-54	9.281404e-52
MsaG003263	MsaG010761	0.834439	5.448100e-56	1.794627e-53
MsaG003263	MsaG010792	0.812718	6.335788e-51	1.156612e-48
MsaG003263	MsaG011147	0.807122	1.001453e-49	1.595844e-47
MsaG003263	MsaG011213	0.821017	8.862974e-53	2.002574e-50
MsaG003263	MsaG011525	0.804963	2.835102e-49	4.294555e-47
MsaG003263	MsaG011469	0.823353	2.561015e-53	6.160062e-51
MsaG003263	MsaG011690	0.840106	1.962434e-57	7.686291e-55
MsaG003263	MsaG012001	0.801524	1.449323e-48	2.028202e-46
MsaG003263	MsaG012026	0.822285	4.527901e-53	1.058104e-50
MsaG003263	MsaG012162	0.830300	5.709903e-55	1.666694e-52
MsaG003263	MsaG012229	0.808518	5.072926e-50	8.359000e-48
MsaG003263	MsaG012334	0.836468	1.681321e-56	5.885589e-54
MsaG003263	MsaG012396	0.837750	7.936159e-57	2.888348e-54
MsaG003263	MsaG012488	0.826461	4.769395e-54	1.249378e-51
MsaG003263	MsaG012525	0.801694	1.338298e-48	1.880070e-46
MsaG003263	MsaG012588	0.811077	1.436638e-50	2.518751e-48
MsaG003263	MsaG012649	0.803700	5.180695e-49	7.621214e-47
MsaG003263	MsaG013968	0.803185	6.617968e-49	9.620230e-47
MsaG003263	MsaG014239	0.806607	1.285009e-49	2.023082e-47
MsaG003263	MsaG014547	0.805187	2.547079e-49	3.878406e-47
MsaG003263	MsaG015221	0.802547	8.951750e-49	1.282327e-46
MsaG003263	MsaG015322	0.800947	1.899710e-48	2.623999e-46
MsaG003263	MsaG016118	0.807025	1.049525e-49	1.668628e-47
MsaG003263	MsaG016159	0.813543	4.183494e-51	7.796385e-49
MsaG003263	MsaG016297	0.821896	5.566198e-53	1.287264e-50
MsaG003263	MsaG016503	0.801729	1.315974e-48	1.850228e-46
MsaG003263	MsaG016911	0.816906	7.547917e-52	1.531670e-49
MsaG003263	MsaG017022	0.817455	5.687513e-52	1.170580e-49
MsaG003263	MsaG017061	0.850254	3.642320e-60	1.991128e-57
MsaG003263	MsaG017148	0.802589	8.775141e-49	1.258238e-46
MsaG003263	MsaG017288	0.802629	8.609816e-49	1.235679e-46
MsaG003263	MsaG017559	0.803271	6.353251e-49	9.253685e-47
MsaG003263	MsaG017568	0.815407	1.626696e-51	3.177117e-49
MsaG003263	MsaG017992	0.804190	4.103886e-49	6.105975e-47
MsaG003263	MsaG018148	0.802160	1.074385e-48	1.525408e-46
MsaG003263	MsaG018437	0.802796	7.954803e-49	1.146003e-46
MsaG003263	MsaG018494	0.800099	2.822832e-48	3.825153e-46
MsaG003263	MsaG018680	0.810342	2.068263e-50	3.561697e-48
MsaG003263	MsaG018785	0.810227	2.189042e-50	3.758990e-48
MsaG003263	MsaG018837	0.807637	7.796267e-50	1.257684e-47
MsaG003263	MsaG019986	0.803283	6.316788e-49	9.203092e-47
MsaG003263	MsaG020499	0.828748	1.355353e-54	3.784795e-52
MsaG003263	MsaG020576	0.809283	3.486179e-50	5.850924e-48
MsaG003263	MsaG020738	0.833039	1.214740e-55	3.838968e-53
MsaG003263	MsaG021320	0.832269	1.882280e-55	5.816562e-53
MsaG003263	MsaG021339	0.802948	7.405497e-49	1.070598e-46
MsaG003263	MsaG021344	0.817883	4.558427e-52	9.485956e-50
MsaG003263	MsaG021433	0.867326	2.993046e-65	3.105932e-62
MsaG003263	MsaG021438	0.857839	2.421029e-62	1.735372e-59
MsaG003263	MsaG021888	0.803931	4.641897e-49	6.865166e-47
MsaG003263	MsaG022363	0.802790	7.980915e-49	1.149579e-46
MsaG003263	MsaG022579	0.839115	3.541417e-57	1.344696e-54
MsaG003263	MsaG023602	0.802518	9.074859e-49	1.299090e-46
MsaG003263	MsaG023913	0.800941	1.904989e-48	2.630922e-46
MsaG003263	MsaG023997	0.833728	8.194516e-56	2.642842e-53
MsaG003263	MsaG024046	0.807331	9.046905e-50	1.448820e-47
MsaG003263	MsaG024126	0.819232	2.261886e-52	4.875034e-50
MsaG003263	MsaG024258	0.810420	1.990223e-50	3.433815e-48
MsaG003263	MsaG025448	0.814993	2.007653e-51	3.880382e-49
MsaG003263	MsaG025481	0.815663	1.426905e-51	2.805088e-49
MsaG003263	MsaG025985	0.829580	8.534136e-55	2.440390e-52
MsaG003263	MsaG027084	0.809972	2.483126e-50	4.237531e-48
MsaG003263	MsaG027432	0.819121	2.397182e-52	5.151684e-50
MsaG003263	MsaG027911	0.831471	2.956201e-55	8.925078e-53
MsaG003263	MsaG027995	0.843857	2.022597e-58	8.926673e-56
MsaG003263	MsaG028181	0.838097	6.470514e-57	2.380230e-54
MsaG003263	MsaG028585	0.804815	3.044216e-49	4.595440e-47
MsaG003263	MsaG029029	0.820884	9.510748e-53	2.141220e-50
MsaG003263	MsaG029172	0.813268	4.804338e-51	8.891819e-49
MsaG003263	MsaG029377	0.804470	3.590006e-49	5.376062e-47
MsaG003263	MsaG029329	0.820502	1.162515e-52	2.591015e-50
MsaG003263	MsaG029562	0.805167	2.571649e-49	3.914011e-47
MsaG003263	MsaG029630	0.807574	8.038314e-50	1.294774e-47
MsaG003263	MsaG029820	0.817544	5.431585e-52	1.120466e-49
MsaG003263	MsaG030238	0.812384	7.487883e-51	1.355680e-48
MsaG003263	MsaG030240	0.837968	6.979901e-57	2.557484e-54
MsaG003263	MsaG030353	0.831636	2.693526e-55	8.171894e-53
MsaG003263	MsaG030455	0.827374	2.891951e-54	7.770913e-52
MsaG003263	MsaG030698	0.813389	4.521204e-51	8.393363e-49
MsaG003263	MsaG030665	0.834365	5.686943e-56	1.869162e-53
MsaG003263	MsaG031706	0.816303	1.028965e-51	2.055935e-49
MsaG003263	MsaG031763	0.821055	8.686990e-53	1.964743e-50
MsaG003263	MsaG032102	0.819333	2.145977e-52	4.637651e-50
MsaG003263	MsaG032564	0.801352	1.571370e-48	2.190442e-46
MsaG003263	MsaG032554	0.812570	6.820922e-51	1.240672e-48
MsaG003263	MsaG033289	0.815830	1.310433e-51	2.586989e-49
MsaG003263	MsaG033589	0.803672	5.252159e-49	7.721122e-47
MsaG003263	MsaG033924	0.802917	7.514750e-49	1.085604e-46
MsaG003263	MsaG034031	0.843884	1.989473e-58	8.788085e-56
MsaG003263	MsaG034365	0.804423	3.671611e-49	5.492373e-47
MsaG003263	MsaG034446	0.800394	2.459828e-48	3.355607e-46
MsaG003263	MsaG034620	0.805393	2.306437e-49	3.528779e-47
MsaG003263	MsaG034621	0.807716	7.500533e-50	1.212333e-47
MsaG003263	MsaG035166	0.805818	1.880549e-49	2.905888e-47
MsaG003263	MsaG035206	0.836901	1.305890e-56	4.631340e-54
MsaG003263	MsaG035637	0.823296	2.639546e-53	6.339187e-51
MsaG003263	MsaG036159	0.810895	1.572436e-50	2.744530e-48
MsaG003263	MsaG036594	0.802548	8.946604e-49	1.281627e-46
MsaG003263	MsaG036982	0.809150	3.720342e-50	6.224382e-48
MsaG003263	MsaG038519	0.841793	7.113126e-58	2.938469e-55
MsaG003263	MsaG038522	0.823547	2.308339e-53	5.581392e-51
MsaG003263	MsaG039607	0.824916	1.104195e-53	2.771341e-51
MsaG003263	MsaG039975	0.845648	6.691015e-59	3.132274e-56
MsaG003263	MsaG039976	0.868530	1.232803e-65	1.344136e-62
MsaG003263	MsaG040487	0.832615	1.546817e-55	4.828091e-53
MsaG003263	MsaG040453	0.803650	5.306994e-49	7.797724e-47
MsaG003263	MsaG040511	0.816637	8.666647e-52	1.746479e-49
MsaG003263	MsaG040731	0.804766	3.115861e-49	4.698237e-47
MsaG003263	MsaG040748	0.813735	3.796756e-51	7.109892e-49
MsaG003263	MsaG040814	0.805526	2.164104e-49	3.321168e-47
MsaG003263	MsaG041746	0.856459	6.159468e-62	4.196321e-59
MsaG003263	MsaG042057	0.846940	2.986530e-59	1.459464e-56
MsaG003263	MsaG042720	0.837353	1.002325e-56	3.603808e-54
MsaG003263	MsaG042729	0.813068	5.312709e-51	9.783997e-49
MsaG003263	MsaG042932	0.831295	3.263844e-55	9.803064e-53
MsaG003263	MsaG043183	0.801143	1.733109e-48	2.404484e-46
MsaG003263	MsaG043554	0.817630	5.195605e-52	1.074122e-49
MsaG003263	MsaG043847	0.804667	3.266357e-49	4.913832e-47
MsaG003263	MsaG044870	0.807453	8.525324e-50	1.369278e-47
MsaG003263	MsaG044932	0.808865	4.279689e-50	7.111293e-48
MsaG003263	MsaG045413	0.841955	6.447810e-58	2.677574e-55
MsaG003263	MsaG045736	0.817834	4.677684e-52	9.721729e-50
MsaG003263	MsaG046278	0.841384	9.106693e-58	3.713443e-55
MsaG003263	MsaG046511	0.812241	8.042273e-51	1.450815e-48
MsaG003263	MsaG046967	0.812448	7.253316e-51	1.315282e-48
MsaG003263	MsaG047200	0.805013	2.768112e-49	4.198003e-47
MsaG003263	MsaG001347	0.824487	1.392426e-53	3.453947e-51
MsaG003263	MsaG001594	0.832668	1.500794e-55	4.691618e-53
MsaG003263	MsaG002980	0.804537	3.476650e-49	5.214487e-47
MsaG003263	MsaG002665	0.801442	1.506547e-48	2.104387e-46
MsaG003263	MsaG002355	0.807899	6.860332e-50	1.113762e-47
MsaG003263	MsaG000822	0.803807	4.923600e-49	7.260838e-47
MsaG003263	MsaG006896	0.835832	2.435029e-56	8.362171e-54
MsaG003263	MsaG013381	0.833275	1.061634e-55	3.378576e-53
MsaG003263	MsaG011923	0.805776	1.918870e-49	2.962144e-47
MsaG003263	MsaG016523	0.833112	1.164945e-55	3.689856e-53
MsaG003263	MsaG018327	0.808220	5.867309e-50	9.598862e-48
MsaG003263	MsaG020201	0.808048	6.379869e-50	1.039456e-47
MsaG003263	MsaG019765	0.812802	6.072117e-51	1.110831e-48
MsaG003263	MsaG019332	0.809788	2.718843e-50	4.619355e-48
MsaG003263	MsaG018137	0.803528	5.622478e-49	8.238101e-47
MsaG003263	MsaG019500	0.821001	8.938325e-53	2.018715e-50
MsaG003263	MsaG026180	0.825953	6.291439e-54	1.624959e-51
MsaG003263	MsaG032293	0.838901	4.021061e-57	1.516710e-54
MsaG003263	MsaG030749	0.816469	9.449149e-52	1.895957e-49
MsaG003263	MsaG033404	0.810181	2.239190e-50	3.840732e-48
MsaG003263	MsaG030906	0.806207	1.559044e-49	2.431436e-47
MsaG003263	MsaG033446	0.803420	5.919400e-49	8.651386e-47
MsaG003263	MsaG030460	0.822181	4.785390e-53	1.115144e-50
MsaG003263	MsaG037042	0.816003	1.199873e-51	2.379084e-49
MsaG003263	MsaG038289	0.806992	1.066511e-49	1.694313e-47
MsaG003263	MsaG036285	0.839698	2.503802e-57	9.682185e-55
MsaG003263	MsaG035919	0.821418	7.173214e-53	1.637933e-50
MsaG003263	MsaG038133	0.852296	9.712709e-61	5.701307e-58
MsaG003263	MsaG036911	0.809715	2.818849e-50	4.780749e-48
MsaG003263	MsaG036541	0.819940	1.561674e-52	3.429245e-50
MsaG003263	MsaG036115	0.800308	2.560506e-48	3.486096e-46
MsaG003263	MsaG037636	0.818948	2.622327e-52	5.610004e-50
MsaG003263	MsaG036344	0.815032	1.968942e-51	3.809165e-49
MsaG003263	MsaG044450	0.808529	5.045525e-50	8.316078e-48
MsaG003263	MsaG043110	0.871502	1.329910e-66	1.642663e-63
MsaG003263	MsaG042910	0.816326	1.016598e-51	2.032449e-49
MsaG003263	MsaG043553	0.801786	1.281108e-48	1.803522e-46
MsaG003263	MsaG047198	0.819880	1.611910e-52	3.533762e-50

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG003263	MtrunA17_Chr1g0183311	93.258	890	60	0	1	890	1	890	0.0	1661
MsaG003263	MtrunA17_Chr1g0211711	79.284	782	115	6	119	890	315	1059	0.0	1273
MsaG003263	MtrunA17_Chr5g0426961	67.629	797	189	7	99	883	97	836	0.0	1065
MsaG003263	MtrunA17_Chr1g0211691	68.309	751	171	9	43	770	239	945	0.0	1001
MsaG003263	MtrunA17_Chr1g0211661	69.408	693	167	5	130	822	218	865	0.0	981
MsaG003263	MtrunA17_Chr5g0420361	68.986	661	182	8	207	863	138	779	0.0	912
MsaG003263	MtrunA17_Chr6g0472441	65.185	675	185	11	207	875	80	710	0.0	858
MsaG003263	MtrunA17_Chr7g0275771	42.700	911	422	22	65	888	36	933	0.0	669
MsaG003263	MtrunA17_Chr5g0448301	60.320	562	162	4	233	792	129	631	0.0	656
MsaG003263	MtrunA17_Chr4g0075261	46.988	747	335	15	144	879	168	864	0.0	637
MsaG003263	MtrunA17_Chr2g0289121	47.703	740	309	13	143	879	155	819	0.0	627
MsaG003263	MtrunA17_Chr1g0192011	37.052	753	400	17	144	880	267	961	1.33e-148	464
MsaG003263	MtrunA17_Chr2g0289031	51.508	431	162	3	451	879	8	393	7.76e-142	426
MsaG003263	MtrunA17_Chr2g0281051	34.704	778	446	15	144	884	207	959	2.00e-133	423
MsaG003263	MtrunA17_Chr1g0147021	45.318	534	255	11	140	669	866	1366	2.34e-132	435
MsaG003263	MtrunA17_Chr1g0147021	72.059	136	38	0	735	870	1551	1686	1.42e-58	219
MsaG003263	MtrunA17_Chr2g0289091	47.619	399	129	10	525	844	23	420	5.92e-101	321
MsaG003263	MtrunA17_Chr4g0048531	37.255	561	295	14	367	880	727	1277	2.12e-99	337
MsaG003263	MtrunA17_Chr4g0048531	33.493	209	121	5	139	338	255	454	6.71e-28	121
MsaG003263	MtrunA17_Chr8g0364421	50.195	257	96	4	254	510	5	229	1.38e-69	230
MsaG003263	MtrunA17_Chr1g0211701	77.236	123	28	0	768	890	4	126	3.18e-64	213
MsaG003263	MtrunA17_Chr8g0340381	70.414	169	31	3	546	714	36	185	1.44e-61	206
MsaG003263	MtrunA17_Chr7g0231061	61.404	171	63	1	505	675	8	175	4.62e-60	203
MsaG003263	MtrunA17_Chr8g0361381	51.337	187	87	1	447	633	26	208	5.28e-58	197
MsaG003263	MtrunA17_Chr8g0361391	77.528	89	19	1	734	822	50	137	1.54e-42	152
MsaG003263	MtrunA17_Chr2g0289041	40.566	212	116	4	166	376	2	204	5.65e-42	152
MsaG003263	MtrunA17_Chr8g0364411	49.650	143	66	2	113	255	8	144	4.10e-36	133
MsaG003263	MtrunA17_Chr1g0211671	77.419	62	14	0	821	882	15	76	2.10e-27	108
MsaG003263	MtrunA17_Chr3g0119761	62.338	77	29	0	619	695	55	131	1.63e-22	94.0
MsaG003263	MtrunA17_Chr2g0289101	37.415	147	82	5	276	418	8	148	4.20e-16	77.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG003263	AT3G07610.1	43.492	922	399	11	27	885	35	897	0.0	713
MsaG003263	AT3G07610.3	42.402	941	404	13	27	885	35	919	0.0	693
MsaG003263	AT1G11950.1	49.123	741	307	13	144	879	193	868	0.0	690
MsaG003263	AT1G11950.3	49.123	741	307	13	144	879	193	868	0.0	690
MsaG003263	AT1G62310.1	49.246	729	312	11	144	868	209	883	0.0	680
MsaG003263	AT4G00990.1	43.718	780	369	16	142	879	78	829	0.0	602
MsaG003263	AT1G11950.2	46.884	674	288	13	144	812	193	801	0.0	587
MsaG003263	AT4G00990.3	42.524	729	349	16	142	828	78	778	1.59e-178	535
MsaG003263	AT4G00990.2	42.857	721	342	16	142	820	78	770	1.66e-177	532
MsaG003263	AT3G07610.2	40.237	676	321	9	27	639	35	690	8.38e-153	468
MsaG003263	AT1G09060.2	32.450	755	423	17	144	880	206	891	8.13e-117	379
MsaG003263	AT1G09060.1	32.450	755	423	17	144	880	206	891	8.13e-117	379
MsaG003263	AT1G09060.4	32.450	755	423	17	144	880	220	905	8.60e-117	379
MsaG003263	AT1G09060.3	32.450	755	423	17	144	880	220	905	8.60e-117	379
MsaG003263	AT4G21430.1	28.897	526	313	10	140	657	223	695	3.79e-60	221
MsaG003263	AT4G21430.1	43.791	153	85	1	734	886	768	919	7.25e-35	144

Find 210 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTAAATATTCTTCCAATTT+AGG	0.124269	1:+54076235	None:intergenic
AGTACATTGCTGACAATTAT+AGG	0.182829	1:+54078329	None:intergenic
TGATAAAGAAAATAGTTTAT+TGG	0.211724	1:-54076314	MsaT003263.1:CDS
TTGCTCGTATGAAGCCTTTA+TGG	0.217000	1:+54076411	None:intergenic
GCTATGGTTTCTTGATTATC+AGG	0.232645	1:+54081010	None:intergenic
AATTTGCACCAATTCTTTAC+TGG	0.236831	1:-54077418	MsaT003263.1:CDS
GAGAGAGGATGTACCTAAAT+TGG	0.270507	1:-54076248	MsaT003263.1:CDS
GTCCTTATTGGTCTGTAATA+AGG	0.273383	1:-54080557	MsaT003263.1:CDS
TCTGCAGACTTGTGATTTAC+TGG	0.286546	1:+54074004	None:intergenic
TTTCTGCCACGTTTCTTTGC+CGG	0.291268	1:+54080950	None:intergenic
AGTGTTCGATTTGTGGAAAA+TGG	0.293306	1:-54076385	MsaT003263.1:CDS
ACAGCATCCTGGACATTTCT+TGG	0.294851	1:+54079653	None:intergenic
GATTGAAGATGTGTCCTTAT+TGG	0.294904	1:-54080569	MsaT003263.1:CDS
CTTCGTGGTGGGAAGCTTCT+AGG	0.295572	1:-54078839	MsaT003263.1:CDS
CTCGCCTGGACTGGCTTAAT+TGG	0.302310	1:-54077384	MsaT003263.1:CDS
TGTTGCTGTTCAATGCATTC+AGG	0.310113	1:+54080713	None:intergenic
TCACAATCATCATCAGCTTT+TGG	0.313148	1:+54078641	None:intergenic
GCTGGAACTGAAGAAGATTA+AGG	0.321087	1:-54080816	MsaT003263.1:CDS
TATGTTATACCTTCAGATTT+CGG	0.326219	1:+54074525	None:intergenic
TAATTCATCTTCTTCCATAA+AGG	0.328727	1:-54076425	MsaT003263.1:CDS
GCAAAATAGTGTTCGATTTG+TGG	0.335906	1:-54076392	MsaT003263.1:CDS
AAGAAAATAGTTTATTGGTT+GGG	0.336358	1:-54076309	MsaT003263.1:CDS
TTTGTCTCTCCTGAAAATAT+TGG	0.339057	1:-54074064	MsaT003263.1:CDS
TCTGGCTGTAAAACATCTTT+AGG	0.339519	1:+54077214	None:intergenic
ATTATCAAGCATGTCAATCT+TGG	0.359732	1:+54076444	None:intergenic
AGAAGCATTTCAGAGAGTTC+AGG	0.360974	1:-54076213	MsaT003263.1:CDS
TTATCAACTTCTTTGAGCTC+TGG	0.364253	1:+54076331	None:intergenic
TACCAAGCAAGAAACACTTT+TGG	0.365164	1:-54078240	MsaT003263.1:CDS
CTTTCCTCAAATAAATTAGA+AGG	0.368022	1:+54077331	None:intergenic
CTGTGGAGACTTCTGATAAT+AGG	0.380102	1:-54078517	MsaT003263.1:CDS
AAGAGGCTTAAGGAGGAGTA+TGG	0.382059	1:-54074720	MsaT003263.1:intron
ATTCTTTAGACGGTGCTCTC+TGG	0.384591	1:-54076282	MsaT003263.1:CDS
AGAAAATAGTTTATTGGTTG+GGG	0.387608	1:-54076308	MsaT003263.1:CDS
TATGGATTTGCTCAGGAGCT+TGG	0.388333	1:-54077166	MsaT003263.1:CDS
GTGCTCTCTGGGATATCTTT+CGG	0.394357	1:-54076270	MsaT003263.1:CDS
GGGAGCTACATGGTGATAAT+CGG	0.399614	1:-54076477	MsaT003263.1:CDS
GCCTCCTTCTAATTTATTTG+AGG	0.400880	1:-54077335	MsaT003263.1:CDS
ATTTGCTCAGGAGCTTGGGC+GGG	0.402390	1:-54077161	MsaT003263.1:CDS
ATCCAAAAGTGTTTCTTGCT+TGG	0.404669	1:+54078238	None:intergenic
CAAGTCTGCAGAGGACAAAT+TGG	0.404949	1:-54073993	MsaT003263.1:CDS
TGTGAAAACTATTGATTGCT+TGG	0.405542	1:-54078216	MsaT003263.1:CDS
ATACCTTCAGATTTCGGACT+TGG	0.410789	1:+54074531	None:intergenic
TTCAATGGCACTGGAGCAAA+GGG	0.413215	1:-54078355	MsaT003263.1:CDS
CTCAACCTCATGGTCATTGT+TGG	0.418130	1:+54079477	None:intergenic
TTTGCTCAGGAGCTTGGGCG+GGG	0.418489	1:-54077160	MsaT003263.1:CDS
ATGGATTTGCTCAGGAGCTT+GGG	0.418850	1:-54077165	MsaT003263.1:CDS
AATGTACTTGAATGTACATC+AGG	0.426491	1:-54078314	MsaT003263.1:CDS
GTCCTTATTACAGACCAATA+AGG	0.427034	1:+54080555	None:intergenic
TCATCCAATCGTCTTAAATA+CGG	0.427692	1:+54079424	None:intergenic
TGGGTACACAAAGGCTCGCC+TGG	0.428484	1:-54077398	MsaT003263.1:CDS
TCAAATAAAACGTCTGATCA+TGG	0.431981	1:+54074757	None:intergenic
TACATACCAACGGTTAATAC+AGG	0.433995	1:+54080450	None:intergenic
TATGAACTCGGCACAATGAC+GGG	0.437450	1:+54077303	None:intergenic
GGAATCACTTGCACTTATCA+AGG	0.438429	1:-54079604	MsaT003263.1:intron
CTGGAACTGAAGAAGATTAA+GGG	0.442023	1:-54080815	MsaT003263.1:CDS
TTGCAATTGCAAAGCATGCT+TGG	0.442345	1:-54079625	MsaT003263.1:CDS
TTCTTTAGACGGTGCTCTCT+GGG	0.443773	1:-54076281	MsaT003263.1:CDS
GGACTGGCTTAATTGGCCTC+AGG	0.444813	1:-54077377	MsaT003263.1:CDS
TTGTGTACCCAGTAAAGAAT+TGG	0.446939	1:+54077410	None:intergenic
TCTTGACCATTCACGAATCT+CGG	0.449180	1:+54078703	None:intergenic
AATGTACATCAGGTTTAAGC+TGG	0.453673	1:-54078304	MsaT003263.1:CDS
GACAAAATCAAGTGCAACCT+TGG	0.456526	1:+54074081	None:intergenic
TGAGAAGGAGTGAGCGTGCT+AGG	0.457513	1:-54080889	MsaT003263.1:CDS
ATGTCAGATGCATTCAAAAC+AGG	0.458193	1:+54078479	None:intergenic
AATGGAGAAGGAAGCCGAAA+AGG	0.459164	1:-54080921	MsaT003263.1:CDS
AGGAAGAAGAAGGTGGCAAT+TGG	0.459943	1:-54080782	MsaT003263.1:CDS
TGAAATGCACGGAATGCAAC+CGG	0.461269	1:-54080489	MsaT003263.1:CDS
GAAGTATGCTTCTCAGTTCA+AGG	0.462341	1:+54078609	None:intergenic
ACACAAAGGCTCGCCTGGAC+TGG	0.464280	1:-54077393	MsaT003263.1:CDS
CTTTGTTGCTGCGAGCTTCG+TGG	0.465758	1:-54078854	MsaT003263.1:CDS
GCTTGATCTGGTCGAGAAGT+TGG	0.466266	1:-54073408	MsaT003263.1:CDS
GACGGATGTGGAGGAGGAGC+TGG	0.466701	1:-54080834	MsaT003263.1:CDS
ATTTGCACCAATTCTTTACT+GGG	0.468225	1:-54077417	MsaT003263.1:CDS
AAAGAAAATAGTTTATTGGT+TGG	0.470270	1:-54076310	MsaT003263.1:CDS
ATTCGTGAATGGTCAAGATC+TGG	0.470424	1:-54078698	MsaT003263.1:CDS
AGGGTATGCAAAATTTCTTC+CGG	0.470503	1:+54080470	None:intergenic
TGTTGATGCTGCCGCTCCTC+CGG	0.475825	1:-54080969	MsaT003263.1:CDS
TTATCAAGCATGTCAATCTT+GGG	0.478672	1:+54076445	None:intergenic
TCATATTGCTGAAGTGAAGC+TGG	0.481347	1:-54076560	MsaT003263.1:CDS
ATGTCCTCCTCTTTCAAGTC+AGG	0.481667	1:+54079678	None:intergenic
ACGATTGGATGAAGAACAAA+TGG	0.482210	1:-54079413	MsaT003263.1:CDS
AGCTTCATCAGGAGCAGCTA+TGG	0.485026	1:+54080994	None:intergenic
TGTGATTTACTGGAAGTTTG+CGG	0.485220	1:+54074014	None:intergenic
GCTGATGATGATTGTGATCA+TGG	0.485370	1:-54078635	MsaT003263.1:CDS
TATTGCTTATGGATTTGCTC+AGG	0.486399	1:-54077173	MsaT003263.1:CDS
GGTTTCTTGATTATCAGGAA+TGG	0.486545	1:+54081015	None:intergenic
CCATTCACGAATCTCGGGTT+GGG	0.489370	1:+54078709	None:intergenic
AAGATAAACTCAAACTCGAT+TGG	0.491141	1:+54078806	None:intergenic
GATTTGCTCAGGAGCTTGGG+CGG	0.493090	1:-54077162	MsaT003263.1:CDS
TATGTATGCTATGCTTGATC+TGG	0.494282	1:-54073420	MsaT003263.1:CDS
TGATGAAATCAATGCTGCTC+AGG	0.495231	1:-54080747	MsaT003263.1:CDS
TCTTCCGTATTTAAGACGAT+TGG	0.495391	1:-54079428	MsaT003263.1:CDS
CTTGACCATTCACGAATCTC+GGG	0.495468	1:+54078704	None:intergenic
GTAAAAGAAATGACAAGGGC+AGG	0.498499	1:-54080516	MsaT003263.1:CDS
ATGGAGAAGGAAGCCGAAAA+GGG	0.499654	1:-54080920	MsaT003263.1:CDS
CAGCTTCTGAACAAAAGTCC+AGG	0.502730	1:+54074589	None:intergenic
CCTTCAGATTTCGGACTTGG+TGG	0.506047	1:+54074534	None:intergenic
TGAAGAACAAATGGCTGAGA+AGG	0.507808	1:-54079404	MsaT003263.1:CDS
GCATCAACAGAAGCTTCATC+AGG	0.508288	1:+54080983	None:intergenic
GTTGAATGAGGATTACTTGA+CGG	0.509960	1:-54080852	MsaT003263.1:CDS
GGAGCTACATGGTGATAATC+GGG	0.514858	1:-54076476	MsaT003263.1:CDS
TTTCAATGGCACTGGAGCAA+AGG	0.515097	1:-54078356	MsaT003263.1:CDS
ACCATTCACGAATCTCGGGT+TGG	0.516372	1:+54078708	None:intergenic
GCTCCCTCTTGTCTTGCTCA+AGG	0.519343	1:+54076494	None:intergenic
GACATTGCCAAGAAATGTCC+AGG	0.520062	1:-54079660	MsaT003263.1:CDS
ACTTGGTGGGGACAACCAGC+TGG	0.521593	1:+54074548	None:intergenic
AGATTAAGGGGAAACGTGGT+AGG	0.523807	1:-54080802	MsaT003263.1:CDS
TACAGTTTACATAGGAACCT+TGG	0.524108	1:+54073174	None:intergenic
AAACTATTGATTGCTTGGAT+TGG	0.524576	1:-54078211	MsaT003263.1:CDS
AGAACTTCTTATACTGTCCC+AGG	0.529232	1:-54078412	MsaT003263.1:CDS
GAATATACAGATCCTTTCAA+TGG	0.530031	1:-54077262	MsaT003263.1:CDS
GCATACCCTGTATTAACCGT+TGG	0.533611	1:-54080456	MsaT003263.1:intron
CGATTTGTGGAAAATGGAAG+TGG	0.534768	1:-54076379	MsaT003263.1:CDS
ATAAAACGTCTGATCATGGA+TGG	0.535414	1:+54074761	None:intergenic
CCATTGCTCTCCTTTAAAGC+AGG	0.538406	1:-54076185	MsaT003263.1:intron
TTCAGATTTCGGACTTGGTG+GGG	0.539205	1:+54074536	None:intergenic
GGATCTGTATATTCTTTGAA+CGG	0.541600	1:+54077271	None:intergenic
ACAACACAGTTGCTTTCACA+AGG	0.541818	1:-54081045	MsaT003263.1:CDS
ATGACGTAGATTTACTGCCC+TGG	0.541910	1:+54078394	None:intergenic
TTGCAATTACCACAGCATCC+TGG	0.543302	1:+54079642	None:intergenic
TTACTTGACGGATGTGGAGG+AGG	0.543839	1:-54080840	MsaT003263.1:CDS
CTGCCACGTTTCTTTGCCGG+AGG	0.549368	1:+54080953	None:intergenic
CGAGGGCGTGATTATCTGCA+TGG	0.550325	1:-54078782	MsaT003263.1:CDS
TGAGGATTACTTGACGGATG+TGG	0.552319	1:-54080846	MsaT003263.1:CDS
GACTTGTAGGAATTGAACCC+TGG	0.555009	1:-54074607	MsaT003263.1:intron
CTTCAGATTTCGGACTTGGT+GGG	0.557725	1:+54074535	None:intergenic
TAAAACGTCTGATCATGGAT+GGG	0.558437	1:+54074762	None:intergenic
TGACGTAGATTTACTGCCCT+GGG	0.558873	1:+54078395	None:intergenic
AATGCACGCCACATGACAAA+CGG	0.559884	1:+54078278	None:intergenic
GAAATCAATGCTGCTCAGGA+GGG	0.560506	1:-54080743	MsaT003263.1:CDS
GCTGGGAACCGTTTGTCATG+TGG	0.563485	1:-54078286	MsaT003263.1:CDS
CTGGGATATCTTTCGGAGAG+AGG	0.564748	1:-54076263	MsaT003263.1:CDS
AAATCAATGCTGCTCAGGAG+GGG	0.565311	1:-54080742	MsaT003263.1:CDS
CACGAAGCTCGCAGCAACAA+AGG	0.565525	1:+54078855	None:intergenic
TGAAGTGAAGCTGGATTCTG+AGG	0.567517	1:-54076551	MsaT003263.1:CDS
TGAAATCAATGCTGCTCAGG+AGG	0.567663	1:-54080744	MsaT003263.1:CDS
GCACCTTGAGCAAGACAAGA+GGG	0.570458	1:-54076497	MsaT003263.1:CDS
ACAGTATAAGAAGTTCTCAC+TGG	0.571064	1:+54078418	None:intergenic
AAGTGGAATATGTGATGAAA+AGG	0.573587	1:-54076362	MsaT003263.1:CDS
GAGGCCAATTAAGCCAGTCC+AGG	0.578924	1:+54077380	None:intergenic
AATCAATGCTGCTCAGGAGG+GGG	0.580226	1:-54080741	MsaT003263.1:CDS
GAATAGTAGATCGTTGAATG+AGG	0.582028	1:-54080864	MsaT003263.1:CDS
GCTTGGTATTACGTATCTGA+CGG	0.582516	1:+54078255	None:intergenic
TGTATATTCTTTGAACGGCA+AGG	0.583089	1:+54077276	None:intergenic
CCTGCTTTAAAGGAGAGCAA+TGG	0.584616	1:+54076185	None:intergenic
GAGTTTGAGTTTATCTTCCG+AGG	0.584896	1:-54078800	MsaT003263.1:CDS
TGGAACTGAAGAAGATTAAG+GGG	0.585226	1:-54080814	MsaT003263.1:CDS
GAAAATAGTTTATTGGTTGG+GGG	0.586081	1:-54076307	MsaT003263.1:CDS
GTTGCTGCGAGCTTCGTGGT+GGG	0.586137	1:-54078850	MsaT003263.1:CDS
AATTAAGCTTCAAGATGCTG+TGG	0.586743	1:-54078534	MsaT003263.1:CDS
GAAACGTGGTAGGAAGAAGA+AGG	0.586757	1:-54080792	MsaT003263.1:CDS
ATATGAACTCGGCACAATGA+CGG	0.586817	1:+54077302	None:intergenic
AAGGTATCCTGACTTGAAAG+AGG	0.587569	1:-54079685	MsaT003263.1:CDS
AGGTTTAGAACACCATTGAA+AGG	0.588651	1:+54077250	None:intergenic
CAAGACAAGAGGGAGCTACA+TGG	0.591607	1:-54076487	MsaT003263.1:CDS
GTCTGCAGAGGACAAATTGG+AGG	0.593405	1:-54073990	MsaT003263.1:intron
TGTTGCTGCGAGCTTCGTGG+TGG	0.594415	1:-54078851	MsaT003263.1:CDS
TGATCTGGTCGAGAAGTTGG+AGG	0.595507	1:-54073405	MsaT003263.1:CDS
TGATTGCTTGGATTGGTGTG+AGG	0.595645	1:-54078204	MsaT003263.1:intron
ACTTGGAGAGCTCAACCTCA+TGG	0.596456	1:+54079467	None:intergenic
AAAACGTCTGATCATGGATG+GGG	0.596952	1:+54074763	None:intergenic
CCCAACCCGAGATTCGTGAA+TGG	0.597529	1:-54078709	MsaT003263.1:CDS
ACGTTTCTTTGCCGGAGGAG+CGG	0.599042	1:+54080958	None:intergenic
CTTTAGGCAACTTCACAGCA+AGG	0.600321	1:+54077230	None:intergenic
AAGAAGGTGGCAATTGGTGT+CGG	0.600696	1:-54080776	MsaT003263.1:CDS
ATGTACATCAGGTTTAAGCT+GGG	0.604955	1:-54078303	MsaT003263.1:CDS
CGAGTGCTTTCGTTTGACAG+AGG	0.605461	1:-54074041	MsaT003263.1:CDS
GGCAGTAAATCTACGTCATG+AGG	0.606103	1:-54078390	MsaT003263.1:CDS
TAAAAGAAATGACAAGGGCA+GGG	0.606870	1:-54080515	MsaT003263.1:CDS
TCCTCAAATAAATTAGAAGG+AGG	0.607054	1:+54077334	None:intergenic
TGGAATATGTGATGAAAAGG+TGG	0.607337	1:-54076359	MsaT003263.1:CDS
AGTTTGAGTTTATCTTCCGA+GGG	0.609136	1:-54078799	MsaT003263.1:CDS
GATACATCTACAGTTTACAT+AGG	0.609345	1:+54073166	None:intergenic
TCTTTCAGTTTCAAAACCTG+AGG	0.609559	1:+54077361	None:intergenic
AGCTTCTGAACAAAAGTCCA+GGG	0.617796	1:+54074590	None:intergenic
AGCACCTTGAGCAAGACAAG+AGG	0.618569	1:-54076498	MsaT003263.1:CDS
TCGGGTTGGGCAGCAGCACG+AGG	0.619296	1:+54078722	None:intergenic
ATGCATTGAACAGCAACAGA+TGG	0.621495	1:-54080708	MsaT003263.1:intron
CGGCAAGGAAGATATGAACT+CGG	0.631163	1:+54077291	None:intergenic
TCGAGAAGTTGGAGGAAGCA+AGG	0.632086	1:-54073397	MsaT003263.1:intron
GAGACAGAAGCAAAGAGACA+AGG	0.635778	1:-54079382	MsaT003263.1:intron
CATACACAATAGCACAAGGA+AGG	0.637072	1:-54078459	MsaT003263.1:CDS
GCTCCTCCGGCAAAGAAACG+TGG	0.637351	1:-54080956	MsaT003263.1:CDS
CATGCAGATAATCACGCCCT+CGG	0.639805	1:+54078783	None:intergenic
TTACAGGTCTGGAGAAACCA+AGG	0.639931	1:-54073191	MsaT003263.1:intron
GGATTACTTGACGGATGTGG+AGG	0.643926	1:-54080843	MsaT003263.1:CDS
CCACCAAGTCCGAAATCTGA+AGG	0.644909	1:-54074534	MsaT003263.1:intron
AAAAGGGCGAAAGTGTGAGA+AGG	0.653518	1:-54080904	MsaT003263.1:CDS
ACATACCAACGGTTAATACA+GGG	0.657296	1:+54080451	None:intergenic
CTGACATACACAATAGCACA+AGG	0.658068	1:-54078463	MsaT003263.1:CDS
GGGCAGGGTTGTGAAATGCA+CGG	0.660572	1:-54080500	MsaT003263.1:CDS
GGATGGCTTGCAGACAGTGA+TGG	0.662046	1:-54078677	MsaT003263.1:CDS
ATTCTTTACTGGGTACACAA+AGG	0.662591	1:-54077407	MsaT003263.1:CDS
ATGAACTCGGCACAATGACG+GGG	0.667242	1:+54077304	None:intergenic
GTATCCTGACTTGAAAGAGG+AGG	0.668706	1:-54079682	MsaT003263.1:CDS
TCAATGTAAAAGAAATGACA+AGG	0.668906	1:-54080521	MsaT003263.1:CDS
CGTGGTGGGAAGCTTCTAGG+TGG	0.669451	1:-54078836	MsaT003263.1:CDS
CTACATGGTGATAATCGGGA+CGG	0.669945	1:-54076472	MsaT003263.1:CDS
GTGAATGGTCAAGATCTGGA+TGG	0.677090	1:-54078694	MsaT003263.1:CDS
AGTAAATCACAAGTCTGCAG+AGG	0.679551	1:-54074002	MsaT003263.1:CDS
GAAGTGAAGCTGGATTCTGA+GGG	0.685715	1:-54076550	MsaT003263.1:CDS
AAGAAATGTCCAGGATGCTG+TGG	0.691596	1:-54079651	MsaT003263.1:CDS
GAACTTCTTATACTGTCCCA+GGG	0.693482	1:-54078411	MsaT003263.1:CDS
GGGCGTGATTATCTGCATGG+TGG	0.701277	1:-54078779	MsaT003263.1:CDS
CTGCATCTGACATATCACAA+TGG	0.702155	1:+54077119	None:intergenic
ACGTGGTAGGAAGAAGAAGG+TGG	0.709702	1:-54080789	MsaT003263.1:CDS
AAGAAGATTAAGGGGAAACG+TGG	0.711553	1:-54080806	MsaT003263.1:CDS
CAACACAGTTGCTTTCACAA+GGG	0.712364	1:-54081044	MsaT003263.1:CDS
CAATGTAAAAGAAATGACAA+GGG	0.715489	1:-54080520	MsaT003263.1:CDS
TCAATGGCACTGGAGCAAAG+GGG	0.769506	1:-54078354	MsaT003263.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	54073180	54081092	54073180	ID=MsaG003263
Chr1	mRNA	54073180	54081092	54073180	ID=MsaT003263.1;Parent=MsaG003263
Chr1	exon	54073180	54073207	54073180	ID=MsaT003263.1.exon13;Parent=MsaT003263.1
Chr1	CDS	54073180	54073207	54073180	ID=cds.MsaT003263.1;Parent=MsaT003263.1
Chr1	exon	54073398	54073456	54073398	ID=MsaT003263.1.exon12;Parent=MsaT003263.1
Chr1	CDS	54073398	54073456	54073398	ID=cds.MsaT003263.1;Parent=MsaT003263.1
Chr1	exon	54073991	54074110	54073991	ID=MsaT003263.1.exon11;Parent=MsaT003263.1
Chr1	CDS	54073991	54074110	54073991	ID=cds.MsaT003263.1;Parent=MsaT003263.1
Chr1	exon	54074535	54074620	54074535	ID=MsaT003263.1.exon10;Parent=MsaT003263.1
Chr1	CDS	54074535	54074620	54074535	ID=cds.MsaT003263.1;Parent=MsaT003263.1
Chr1	exon	54074721	54074793	54074721	ID=MsaT003263.1.exon9;Parent=MsaT003263.1
Chr1	CDS	54074721	54074793	54074721	ID=cds.MsaT003263.1;Parent=MsaT003263.1
Chr1	exon	54076186	54076596	54076186	ID=MsaT003263.1.exon8;Parent=MsaT003263.1
Chr1	CDS	54076186	54076596	54076186	ID=cds.MsaT003263.1;Parent=MsaT003263.1
Chr1	exon	54077120	54077449	54077120	ID=MsaT003263.1.exon7;Parent=MsaT003263.1
Chr1	CDS	54077120	54077449	54077120	ID=cds.MsaT003263.1;Parent=MsaT003263.1
Chr1	exon	54078205	54078946	54078205	ID=MsaT003263.1.exon6;Parent=MsaT003263.1
Chr1	CDS	54078205	54078946	54078205	ID=cds.MsaT003263.1;Parent=MsaT003263.1
Chr1	exon	54079025	54079088	54079025	ID=MsaT003263.1.exon5;Parent=MsaT003263.1
Chr1	CDS	54079025	54079088	54079025	ID=cds.MsaT003263.1;Parent=MsaT003263.1
Chr1	exon	54079383	54079521	54079383	ID=MsaT003263.1.exon4;Parent=MsaT003263.1
Chr1	CDS	54079383	54079521	54079383	ID=cds.MsaT003263.1;Parent=MsaT003263.1
Chr1	exon	54079605	54079704	54079605	ID=MsaT003263.1.exon3;Parent=MsaT003263.1
Chr1	CDS	54079605	54079704	54079605	ID=cds.MsaT003263.1;Parent=MsaT003263.1
Chr1	exon	54080457	54080593	54080457	ID=MsaT003263.1.exon2;Parent=MsaT003263.1
Chr1	CDS	54080457	54080593	54080457	ID=cds.MsaT003263.1;Parent=MsaT003263.1
Chr1	exon	54080709	54081092	54080709	ID=MsaT003263.1.exon1;Parent=MsaT003263.1
Chr1	CDS	54080709	54081092	54080709	ID=cds.MsaT003263.1;Parent=MsaT003263.1

Gene Sequence

>MsaT003263.1

ATGGCGGGGGAAGAAGACAACAACAACAACACAGTTGCTTTCACAAGGGAAGAATCCATTCCTGATAATCAAGAAACCATAGCTGCTCCTGATGAAGCTTCTGTTGATGCTGCCGCTCCTCCGGCAAAGAAACGTGGCAGAAAGAGAAAAATGGAGAAGGAAGCCGAAAAGGGCGAAAGTGTGAGAAGGAGTGAGCGTGCTAGGAAGAATAGTAGATCGTTGAATGAGGATTACTTGACGGATGTGGAGGAGGAGCTGGAACTGAAGAAGATTAAGGGGAAACGTGGTAGGAAGAAGAAGGTGGCAATTGGTGTCGGTGTTTCTGATGAAATCAATGCTGCTCAGGAGGGGGAGAAACCTGAATGCATTGAACAGCAACAGATGGGGATTGAAGATGTGTCCTTATTGGTCTGTAATAAGGACACTAATTGCCATCAATGTAAAAGAAATGACAAGGGCAGGGTTGTGAAATGCACGGAATGCAACCGGAAGAAATTTTGCATACCCTGTATTAACCGTTGGTATCCTGACTTGAAAGAGGAGGACATTGCCAAGAAATGTCCAGGATGCTGTGGTAATTGCAATTGCAAAGCATGCTTGGAATCACTTGCACTTATCAAGGCAATTAAAGAGAAGCCAAAAACCAACAATGACCATGAGGTTGAGCTCTCCAAGTATATGCTGAAAATACTTCTTCCGTATTTAAGACGATTGGATGAAGAACAAATGGCTGAGAAGGAGACAGAAGCAAAGAGACAAGGGATCTCATGTTCTGAGCTAAAAATAAAAGCCGCAGATATCCCTAAAAAAGAGCGTGTGTACTGTGACAACTGCAAAACGTCAATATTTGACTACCACAGAAGCTGTACAAAATGCTCTTTTGACATTTGTCTCCTTTGTTGCTGCGAGCTTCGTGGTGGGAAGCTTCTAGGTGGTGCAGATCCAATCGAGTTTGAGTTTATCTTCCGAGGGCGTGATTATCTGCATGGTGGAAATGATAATGAAGAGAGAGTAAATGAAAGTGAACCTCGTGCTGCTGCCCAACCCGAGATTCGTGAATGGTCAAGATCTGGATGGCTTGCAGACAGTGATGGTAGCATTCCCTGTCCAAAAGCTGATGATGATTGTGATCATGGTTTCCTTGAACTGAGAAGCATACTTCCACAAAATTGCATCTCCGAGTTAGTATGTAAAGCAAAAGAACATGAAGAAACAATTAAGCTTCAAGATGCTGTGGAGACTTCTGATAATAGGTGTTCTTGTTTGAAGCCTGTTTTGAATGCATCTGACATACACAATAGCACAAGGAAGGCAGCTTCTCGTGAAGATTCCAGTGAGAACTTCTTATACTGTCCCAGGGCAGTAAATCTACGTCATGAGGATTTAAGACATTTTCAATGGCACTGGAGCAAAGGGGAGCCTATAATTGTCAGCAATGTACTTGAATGTACATCAGGTTTAAGCTGGGAACCGTTTGTCATGTGGCGTGCATTCCGTCAGATACGTAATACCAAGCAAGAAACACTTTTGGATGTGAAAACTATTGATTGCTTGGATTGGTGTGAGGGAGATCTTAATTTGCACCAATTCTTTACTGGGTACACAAAGGCTCGCCTGGACTGGCTTAATTGGCCTCAGGTTTTGAAACTGAAAGATTGGCCTCCTTCTAATTTATTTGAGGAAAGTTTGCCCCGTCATTGTGCCGAGTTCATATCTTCCTTGCCGTTCAAAGAATATACAGATCCTTTCAATGGTGTTCTAAACCTTGCTGTGAAGTTGCCTAAAGATGTTTTACAGCCAGACATGGGCCCAAAAACATATATTGCTTATGGATTTGCTCAGGAGCTTGGGCGGGGTGATTCTGTGACTAAGCTCCATTGTGATATGTCAGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTGAAGCTGGATTCTGAGGGCATTAATGCCATTAAAAAACTGACACAAAAGCACCTTGAGCAAGACAAGAGGGAGCTACATGGTGATAATCGGGACGGAGAGCCCAAGATTGACATGCTTGATAATTCATCTTCTTCCATAAAGGCTTCATACGAGCAAAATAGTGTTCGATTTGTGGAAAATGGAAGTGGAATATGTGATGAAAAGGTGGTTGATCCAGAGCTCAAAGAAGTTGATAAAGAAAATAGTTTATTGGTTGGGGGAAATTCTTTAGACGGTGCTCTCTGGGATATCTTTCGGAGAGAGGATGTACCTAAATTGGAAGAATATTTAAAGAAGCATTTCAGAGAGTTCAGGCATGTCCATTGCTCTCCTTTAAAGCAGGTTGTTCACCCCATCCATGATCAGACGTTTTATTTGACTATCGAGCATAAAAAGAGGCTTAAGGAGGAGTATGGAATTGAACCCTGGACTTTTGTTCAGAAGCTGGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCCCACCAAGTCCGAAATCTGAAGTCATGCACCAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATATTGGCGAGTGCTTTCGTTTGACAGAGGAATTCCGCAAACTTCCAGTAAATCACAAGTCTGCAGAGGACAAATTGGAGGTGAAGAAAATGATTATGTATGCTATGCTTGATCTGGTCGAGAAGTTGGAGGAAGCAAGGTCTGGAGAAACCAAGGTTCCTATGTAA

Protein sequence

>MsaT003263.1

MAGEEDNNNNTVAFTREESIPDNQETIAAPDEASVDAAAPPAKKRGRKRKMEKEAEKGESVRRSERARKNSRSLNEDYLTDVEEELELKKIKGKRGRKKKVAIGVGVSDEINAAQEGEKPECIEQQQMGIEDVSLLVCNKDTNCHQCKRNDKGRVVKCTECNRKKFCIPCINRWYPDLKEEDIAKKCPGCCGNCNCKACLESLALIKAIKEKPKTNNDHEVELSKYMLKILLPYLRRLDEEQMAEKETEAKRQGISCSELKIKAADIPKKERVYCDNCKTSIFDYHRSCTKCSFDICLLCCCELRGGKLLGGADPIEFEFIFRGRDYLHGGNDNEERVNESEPRAAAQPEIREWSRSGWLADSDGSIPCPKADDDCDHGFLELRSILPQNCISELVCKAKEHEETIKLQDAVETSDNRCSCLKPVLNASDIHNSTRKAASREDSSENFLYCPRAVNLRHEDLRHFQWHWSKGEPIIVSNVLECTSGLSWEPFVMWRAFRQIRNTKQETLLDVKTIDCLDWCEGDLNLHQFFTGYTKARLDWLNWPQVLKLKDWPPSNLFEESLPRHCAEFISSLPFKEYTDPFNGVLNLAVKLPKDVLQPDMGPKTYIAYGFAQELGRGDSVTKLHCDMSDAVNVLTHIAEVKLDSEGINAIKKLTQKHLEQDKRELHGDNRDGEPKIDMLDNSSSSIKASYEQNSVRFVENGSGICDEKVVDPELKEVDKENSLLVGGNSLDGALWDIFRREDVPKLEEYLKKHFREFRHVHCSPLKQVVHPIHDQTFYLTIEHKKRLKEEYGIEPWTFVQKLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENIGECFRLTEEFRKLPVNHKSAEDKLEVKKMIMYAMLDLVEKLEEARSGETKVPM*