AlfalfaGEDB | MsaG003370

M. sativa ssp. caerulea / MsaG003370

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006082 GO:0006355 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016143 GO:0019219 GO:0019222 GO:0019748 GO:0019757 GO:0019760 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043565 GO:0044237 GO:0044281 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:0140110 GO:1901135 GO:1901363 GO:1901564 GO:1901657 GO:1903506 GO:2000112 GO:2001141
PFAM: PF10533.12

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG003370	XP_013468573.1	98.889	360	4	0	1	360	1	360	0.0	740

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG003370	sp\|O04336\|WRK21_ARATH	55.844	385	132	14	1	356	1	376	1.06e-114	341

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG003370	tr\|A0A072VWY9\|A0A072VWY9_MEDTR	98.889	360	4	0	1	360	1	360	0.0	740

TFs/TRs:

Gene ID	Type	Classification
MsaG003370	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000128	MsaG003370	0.832979	1.256814e-55	3.965012e-53
MsaG000198	MsaG003370	0.828028	2.017642e-54	5.521896e-52
MsaG000250	MsaG003370	0.804743	3.150745e-49	4.748309e-47
MsaG000308	MsaG003370	0.801869	1.232280e-48	1.738110e-46
MsaG000352	MsaG003370	0.814322	2.822916e-51	5.364522e-49
MsaG000550	MsaG003370	0.803128	6.798786e-49	9.869998e-47
MsaG001396	MsaG003370	0.822603	3.823649e-53	9.012228e-51
MsaG001558	MsaG003370	0.801345	1.576211e-48	2.196890e-46
MsaG001660	MsaG003370	0.833962	7.164549e-56	2.326522e-53
MsaG001728	MsaG003370	0.806987	1.069122e-49	1.698261e-47
MsaG002045	MsaG003370	0.818058	4.164828e-52	8.705955e-50
MsaG002021	MsaG003370	0.800853	1.985361e-48	2.736493e-46
MsaG002184	MsaG003370	0.809987	2.464494e-50	4.207325e-48
MsaG002214	MsaG003370	0.807267	9.331201e-50	1.492039e-47
MsaG002350	MsaG003370	0.808542	5.012409e-50	8.264135e-48
MsaG002977	MsaG003370	0.827793	2.296790e-54	6.244627e-52
MsaG003039	MsaG003370	0.808129	6.132484e-50	1.001086e-47
MsaG003161	MsaG003370	0.818127	4.017242e-52	8.412614e-50
MsaG003370	MsaG003649	0.812269	7.930425e-51	1.431648e-48
MsaG003370	MsaG003682	0.812116	8.562169e-51	1.539837e-48
MsaG003370	MsaG003708	0.803603	5.425646e-49	7.963345e-47
MsaG003370	MsaG003901	0.814986	2.015114e-51	3.894091e-49
MsaG003370	MsaG003912	0.867043	3.683079e-65	3.778625e-62
MsaG003370	MsaG003964	0.802113	1.098495e-48	1.557956e-46
MsaG003370	MsaG004159	0.830585	4.865703e-55	1.431827e-52
MsaG003370	MsaG004264	0.807585	7.996942e-50	1.288449e-47
MsaG003370	MsaG004290	0.816471	9.437807e-52	1.893792e-49
MsaG003370	MsaG004370	0.808471	5.189299e-50	8.541255e-48
MsaG003370	MsaG004361	0.808692	4.657335e-50	7.706842e-48
MsaG003370	MsaG004427	0.811845	9.805173e-51	1.751712e-48
MsaG003370	MsaG004431	0.811592	1.111951e-50	1.974279e-48
MsaG003370	MsaG004385	0.800570	2.266208e-48	3.103806e-46
MsaG003370	MsaG004684	0.805309	2.402195e-49	3.668039e-47
MsaG003370	MsaG004745	0.800564	2.272303e-48	3.111722e-46
MsaG003370	MsaG004913	0.816517	9.217683e-52	1.851826e-49
MsaG003370	MsaG005117	0.813943	3.419088e-51	6.436241e-49
MsaG003370	MsaG005289	0.805516	2.174194e-49	3.335911e-47
MsaG003370	MsaG005354	0.803794	4.956003e-49	7.306305e-47
MsaG003370	MsaG005584	0.826132	5.705781e-54	1.481050e-51
MsaG003370	MsaG005770	0.835485	2.977961e-56	1.012116e-53
MsaG003370	MsaG005994	0.801202	1.686134e-48	2.342376e-46
MsaG003370	MsaG006016	0.809247	3.547285e-50	5.948450e-48
MsaG003370	MsaG006127	0.802005	1.155814e-48	1.635222e-46
MsaG003370	MsaG006318	0.826438	4.830320e-54	1.264509e-51
MsaG003370	MsaG006420	0.818429	3.435571e-52	7.250571e-50
MsaG003370	MsaG006440	0.832129	2.037447e-55	6.271033e-53
MsaG003370	MsaG006469	0.828216	1.818956e-54	5.004454e-52
MsaG003370	MsaG006558	0.828034	2.011253e-54	5.505346e-52
MsaG003370	MsaG006833	0.821897	5.563334e-53	1.286642e-50
MsaG003370	MsaG006898	0.801385	1.547185e-48	2.158358e-46
MsaG003370	MsaG006988	0.809715	2.818348e-50	4.779919e-48
MsaG003370	MsaG007413	0.827260	3.079637e-54	8.248576e-52
MsaG003370	MsaG007537	0.811284	1.296507e-50	2.284593e-48
MsaG003370	MsaG007600	0.816615	8.766625e-52	1.765627e-49
MsaG003370	MsaG007601	0.817095	6.847746e-52	1.396408e-49
MsaG003370	MsaG007626	0.810757	1.683699e-50	2.928867e-48
MsaG003370	MsaG007652	0.853783	3.662769e-61	2.265681e-58
MsaG003370	MsaG008166	0.827267	3.067781e-54	8.218517e-52
MsaG003370	MsaG008256	0.807325	9.074267e-50	1.452981e-47
MsaG003370	MsaG008604	0.801847	1.244940e-48	1.755074e-46
MsaG003370	MsaG009179	0.816148	1.113832e-51	2.216786e-49
MsaG003370	MsaG009261	0.819223	2.272501e-52	4.896790e-50
MsaG003370	MsaG009472	0.803577	5.493611e-49	8.058364e-47
MsaG003370	MsaG009672	0.817266	6.271622e-52	1.284551e-49
MsaG003370	MsaG009781	0.843101	3.212132e-58	1.383764e-55
MsaG003370	MsaG009850	0.805564	2.124693e-49	3.263593e-47
MsaG003370	MsaG010213	0.830292	5.734021e-55	1.673370e-52
MsaG003370	MsaG010328	0.827254	3.089371e-54	8.273315e-52
MsaG003370	MsaG010642	0.801274	1.630013e-48	2.268129e-46
MsaG003370	MsaG011018	0.807611	7.896778e-50	1.273100e-47
MsaG003370	MsaG011468	0.805235	2.488404e-49	3.793298e-47
MsaG003370	MsaG011580	0.805368	2.335358e-49	3.570864e-47
MsaG003370	MsaG011605	0.832050	2.130950e-55	6.543794e-53
MsaG003370	MsaG011833	0.815957	1.228198e-51	2.432528e-49
MsaG003370	MsaG011783	0.816939	7.419808e-52	1.506974e-49
MsaG003370	MsaG011784	0.819084	2.442887e-52	5.244847e-50
MsaG003370	MsaG012023	0.824507	1.377537e-53	3.418845e-51
MsaG003370	MsaG012204	0.845380	7.900316e-59	3.665864e-56
MsaG003370	MsaG012361	0.801324	1.591878e-48	2.217660e-46
MsaG003370	MsaG012586	0.809024	3.958820e-50	6.603195e-48
MsaG003370	MsaG012778	0.804709	3.202197e-49	4.821959e-47
MsaG003370	MsaG013230	0.802646	8.539949e-49	1.226114e-46
MsaG003370	MsaG013338	0.813618	4.028876e-51	7.522289e-49
MsaG003370	MsaG013321	0.802230	1.039592e-48	1.478393e-46
MsaG003370	MsaG013849	0.808984	4.037752e-50	6.728398e-48
MsaG003370	MsaG014291	0.825174	9.602989e-54	2.427262e-51
MsaG003370	MsaG014542	0.816843	7.797223e-52	1.579628e-49
MsaG003370	MsaG014725	0.843307	2.831719e-58	1.228042e-55
MsaG003370	MsaG015623	0.819247	2.243897e-52	4.838235e-50
MsaG003370	MsaG015953	0.807674	7.656396e-50	1.236245e-47
MsaG003370	MsaG017083	0.800124	2.790281e-48	3.783109e-46
MsaG003370	MsaG017105	0.823045	3.019121e-53	7.201575e-51
MsaG003370	MsaG017376	0.815355	1.669862e-51	3.257167e-49
MsaG003370	MsaG017464	0.848472	1.135620e-59	5.842155e-57
MsaG003370	MsaG017473	0.829204	1.052376e-54	2.976681e-52
MsaG003370	MsaG017589	0.816707	8.362053e-52	1.688172e-49
MsaG003370	MsaG017888	0.814152	3.076436e-51	5.821361e-49
MsaG003370	MsaG018045	0.816973	7.291665e-52	1.482223e-49
MsaG003370	MsaG018113	0.800550	2.287269e-48	3.131197e-46
MsaG003370	MsaG018135	0.834211	6.209860e-56	2.031544e-53
MsaG003370	MsaG018259	0.846472	4.002911e-59	1.925714e-56
MsaG003370	MsaG018263	0.847863	1.670034e-59	8.419337e-57
MsaG003370	MsaG018400	0.815737	1.374183e-51	2.706457e-49
MsaG003370	MsaG018484	0.809479	3.165114e-50	5.337842e-48
MsaG003370	MsaG018523	0.811566	1.126552e-50	1.998887e-48
MsaG003370	MsaG018752	0.808636	4.787289e-50	7.910791e-48
MsaG003370	MsaG019084	0.818437	3.420789e-52	7.220962e-50
MsaG003370	MsaG019153	0.804800	3.066176e-49	4.626914e-47
MsaG003370	MsaG019215	0.800588	2.246680e-48	3.078317e-46
MsaG003370	MsaG019221	0.801069	1.794470e-48	2.485391e-46
MsaG003370	MsaG019287	0.806718	1.217875e-49	1.922346e-47
MsaG003370	MsaG019422	0.828889	1.253489e-54	3.514415e-52
MsaG003370	MsaG019467	0.800595	2.239316e-48	3.068757e-46
MsaG003370	MsaG020023	0.837816	7.633533e-57	2.783858e-54
MsaG003370	MsaG020402	0.838708	4.508887e-57	1.690456e-54
MsaG003370	MsaG020616	0.801628	1.380479e-48	1.936438e-46
MsaG003370	MsaG020718	0.809535	3.079739e-50	5.200713e-48
MsaG003370	MsaG020787	0.804556	3.445771e-49	5.170433e-47
MsaG003370	MsaG020885	0.809353	3.367170e-50	5.660827e-48
MsaG003370	MsaG020888	0.801934	1.195418e-48	1.688548e-46
MsaG003370	MsaG021046	0.831762	2.508211e-55	7.638059e-53
MsaG003370	MsaG022116	0.836113	2.068104e-56	7.162677e-54
MsaG003370	MsaG022895	0.815100	1.901265e-51	3.684559e-49
MsaG003370	MsaG023119	0.822673	3.683086e-53	8.697369e-51
MsaG003370	MsaG023474	0.827272	3.059186e-54	8.196702e-52
MsaG003370	MsaG023475	0.820423	1.211959e-52	2.695643e-50
MsaG003370	MsaG023680	0.817375	5.928085e-52	1.217585e-49
MsaG003370	MsaG023723	0.874354	1.488991e-67	2.081825e-64
MsaG003370	MsaG023929	0.803831	4.869380e-49	7.184713e-47
MsaG003370	MsaG023941	0.810714	1.720339e-50	2.989400e-48
MsaG003370	MsaG024001	0.806419	1.407312e-49	2.205840e-47
MsaG003370	MsaG024426	0.817279	6.228990e-52	1.276256e-49
MsaG003370	MsaG025351	0.809062	3.885065e-50	6.486251e-48
MsaG003370	MsaG027243	0.812170	8.332935e-51	1.500613e-48
MsaG003370	MsaG027292	0.815242	1.768862e-51	3.440442e-49
MsaG003370	MsaG027469	0.840594	1.464748e-57	5.825667e-55
MsaG003370	MsaG027494	0.836206	1.958830e-56	6.803090e-54
MsaG003370	MsaG027749	0.808856	4.297430e-50	7.139291e-48
MsaG003370	MsaG028142	0.830090	6.421850e-55	1.863343e-52
MsaG003370	MsaG028250	0.813224	4.911948e-51	9.081246e-49
MsaG003370	MsaG028292	0.842181	5.622006e-58	2.351425e-55
MsaG003370	MsaG028488	0.808247	5.790236e-50	9.479126e-48
MsaG003370	MsaG028609	0.821165	8.199265e-53	1.859826e-50
MsaG003370	MsaG028614	0.840531	1.520792e-57	6.036662e-55
MsaG003370	MsaG028664	0.834130	6.508442e-56	2.123979e-53
MsaG003370	MsaG028681	0.817896	4.529855e-52	9.429352e-50
MsaG003370	MsaG028761	0.801166	1.714649e-48	2.380096e-46
MsaG003370	MsaG028862	0.821742	6.042711e-53	1.391717e-50
MsaG003370	MsaG028990	0.807862	6.987196e-50	1.133334e-47
MsaG003370	MsaG029132	0.819343	2.134417e-52	4.613991e-50
MsaG003370	MsaG029361	0.807477	8.425397e-50	1.354013e-47
MsaG003370	MsaG029362	0.844748	1.168084e-58	5.308427e-56
MsaG003370	MsaG029470	0.811753	1.026224e-50	1.829241e-48
MsaG003370	MsaG030267	0.806169	1.587683e-49	2.473790e-47
MsaG003370	MsaG030243	0.815137	1.865757e-51	3.619100e-49
MsaG003370	MsaG031064	0.810251	2.163068e-50	3.716628e-48
MsaG003370	MsaG032716	0.800149	2.758074e-48	3.741580e-46
MsaG003370	MsaG033688	0.812488	7.109011e-51	1.290415e-48
MsaG003370	MsaG034151	0.804126	4.229449e-49	6.283617e-47
MsaG003370	MsaG035190	0.806868	1.132488e-49	1.793873e-47
MsaG003370	MsaG035236	0.808060	6.344133e-50	1.033915e-47
MsaG003370	MsaG035238	0.833607	8.781189e-56	2.821969e-53
MsaG003370	MsaG035317	0.806823	1.157445e-49	1.831467e-47
MsaG003370	MsaG035456	0.819286	2.199454e-52	4.747290e-50
MsaG003370	MsaG036426	0.802346	9.844045e-49	1.403683e-46
MsaG003370	MsaG036444	0.822318	4.448455e-53	1.040504e-50
MsaG003370	MsaG037874	0.836466	1.684067e-56	5.894766e-54
MsaG003370	MsaG038011	0.824585	1.320365e-53	3.283907e-51
MsaG003370	MsaG039673	0.810009	2.437454e-50	4.163476e-48
MsaG003370	MsaG039946	0.833720	8.230867e-56	2.653937e-53
MsaG003370	MsaG040483	0.823221	2.748450e-53	6.587091e-51
MsaG003370	MsaG040435	0.802950	7.396669e-49	1.069380e-46
MsaG003370	MsaG040474	0.837735	8.006793e-57	2.912688e-54
MsaG003370	MsaG040566	0.831543	2.838656e-55	8.588436e-53
MsaG003370	MsaG041358	0.800550	2.287269e-48	3.131197e-46
MsaG003370	MsaG041463	0.827597	2.558613e-54	6.918281e-52
MsaG003370	MsaG041920	0.852156	1.063616e-60	6.212559e-58
MsaG003370	MsaG042087	0.821833	5.757027e-53	1.329128e-50
MsaG003370	MsaG042241	0.808412	5.342241e-50	8.780162e-48
MsaG003370	MsaG043017	0.809812	2.686676e-50	4.567357e-48
MsaG003370	MsaG043225	0.801362	1.563505e-48	2.179998e-46
MsaG003370	MsaG043571	0.832713	1.462624e-55	4.578593e-53
MsaG003370	MsaG043879	0.813838	3.606036e-51	6.770302e-49
MsaG003370	MsaG044048	0.809322	3.419376e-50	5.744218e-48
MsaG003370	MsaG044049	0.806843	1.146238e-49	1.814549e-47
MsaG003370	MsaG044795	0.819774	1.704154e-52	3.725429e-50
MsaG003370	MsaG044863	0.808823	4.367962e-50	7.250617e-48
MsaG003370	MsaG045107	0.822031	5.182743e-53	1.202914e-50
MsaG003370	MsaG045130	0.813353	4.603117e-51	8.537488e-49
MsaG003370	MsaG045285	0.815104	1.898178e-51	3.678880e-49
MsaG003370	MsaG045590	0.805619	2.069937e-49	3.183635e-47
MsaG003370	MsaG045740	0.807873	6.950320e-50	1.127645e-47
MsaG003370	MsaG045788	0.821724	6.098202e-53	1.403880e-50
MsaG003370	MsaG045950	0.830419	5.341892e-55	1.564589e-52
MsaG003370	MsaG045965	0.800353	2.508058e-48	3.418177e-46
MsaG003370	MsaG045997	0.822541	3.951991e-53	9.299088e-51
MsaG003370	MsaG046094	0.805742	1.950133e-49	3.008071e-47
MsaG003370	MsaG046247	0.832328	1.819739e-55	5.632857e-53
MsaG003370	MsaG046265	0.800937	1.908536e-48	2.635591e-46
MsaG003370	MsaG046268	0.816066	1.161823e-51	2.307347e-49
MsaG003370	MsaG046277	0.829091	1.120616e-54	3.159787e-52
MsaG003370	MsaG046537	0.818969	2.593752e-52	5.551976e-50
MsaG003370	MsaG046895	0.831916	2.299071e-55	7.032492e-53
MsaG003370	MsaG046944	0.822793	3.454575e-53	8.184572e-51
MsaG003370	MsaG047118	0.802056	1.128661e-48	1.598684e-46
MsaG003370	MsaG002231	0.808804	4.409081e-50	7.315428e-48
MsaG003370	MsaG002466	0.804890	2.936763e-49	4.440953e-47
MsaG003370	MsaG002575	0.819676	1.793002e-52	3.909613e-50
MsaG003370	MsaG002582	0.816752	8.169423e-52	1.651238e-49
MsaG003370	MsaG003779	0.803276	6.339264e-49	9.234352e-47
MsaG003370	MsaG000843	0.821686	6.223326e-53	1.431208e-50
MsaG003370	MsaG009602	0.831094	3.654908e-55	1.091436e-52
MsaG003370	MsaG009633	0.829531	8.769516e-55	2.504155e-52
MsaG003370	MsaG009163	0.834359	5.704881e-56	1.874755e-53
MsaG003370	MsaG006602	0.810402	2.008070e-50	3.463053e-48
MsaG003370	MsaG016152	0.830957	3.948471e-55	1.174451e-52
MsaG003370	MsaG017401	0.821031	8.800969e-53	1.989247e-50
MsaG003370	MsaG012483	0.809686	2.858539e-50	4.844761e-48
MsaG003370	MsaG012735	0.842884	3.667182e-58	1.568840e-55
MsaG003370	MsaG013856	0.804374	3.758875e-49	5.616568e-47
MsaG003370	MsaG021945	0.818009	4.270890e-52	8.916790e-50
MsaG003370	MsaG019319	0.812946	5.650024e-51	1.037319e-48
MsaG003370	MsaG019753	0.813406	4.483297e-51	8.326393e-49
MsaG003370	MsaG027643	0.802940	7.433730e-49	1.074492e-46
MsaG003370	MsaG027945	0.802749	8.137015e-49	1.170970e-46
MsaG003370	MsaG027101	0.803866	4.788620e-49	7.071367e-47
MsaG003370	MsaG026813	0.800145	2.763004e-48	3.747919e-46
MsaG003370	MsaG029395	0.829690	8.025549e-55	2.302145e-52
MsaG003370	MsaG032460	0.824040	1.770813e-53	4.339588e-51
MsaG003370	MsaG031225	0.822035	5.172205e-53	1.200599e-50
MsaG003370	MsaG032451	0.801203	1.684619e-48	2.340388e-46
MsaG003370	MsaG030575	0.804391	3.728045e-49	5.572704e-47
MsaG003370	MsaG031628	0.867119	3.483914e-65	3.585000e-62
MsaG003370	MsaG037377	0.817852	4.632831e-52	9.632943e-50
MsaG003370	MsaG035814	0.811012	1.484199e-50	2.597895e-48
MsaG003370	MsaG034989	0.844002	1.849557e-58	8.201069e-56
MsaG003370	MsaG040619	0.816055	1.167916e-51	2.318852e-49
MsaG003370	MsaG037381	0.804100	4.283895e-49	6.360756e-47
MsaG003370	MsaG037376	0.804306	3.882362e-49	5.792059e-47
MsaG003370	MsaG036652	0.837203	1.094371e-56	3.916864e-54
MsaG003370	MsaG038223	0.817109	6.798361e-52	1.386831e-49
MsaG003370	MsaG038171	0.835113	3.692804e-56	1.241151e-53
MsaG003370	MsaG036499	0.804888	2.938561e-49	4.443544e-47
MsaG003370	MsaG044907	0.829326	9.829931e-55	2.790362e-52
MsaG003370	MsaG043681	0.823302	2.631685e-53	6.321188e-51
MsaG003370	MsaG041446	0.839141	3.486175e-57	1.324773e-54
MsaG003370	MsaG047040	0.814860	2.148904e-51	4.139363e-49

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG003370	MtrunA17_Chr1g0184691	98.889	360	4	0	1	360	1	360	0.0	740
MsaG003370	MtrunA17_Chr1g0147881	36.313	358	162	10	4	350	17	319	2.39e-57	189
MsaG003370	MtrunA17_Chr4g0053281	56.044	182	58	4	183	351	152	324	2.27e-55	184
MsaG003370	MtrunA17_Chr5g0401821	74.074	108	26	2	245	351	151	257	5.26e-53	176
MsaG003370	MtrunA17_Chr4g0071521	64.234	137	38	4	218	351	175	303	1.09e-51	174
MsaG003370	MtrunA17_Chr3g0139021	48.466	163	72	5	205	359	222	380	2.91e-40	146
MsaG003370	MtrunA17_Chr7g0228941	59.494	79	32	0	272	350	31	109	2.01e-31	115
MsaG003370	MtrunA17_Chr2g0284321	55.682	88	38	1	268	354	9	96	1.81e-27	107
MsaG003370	MtrunA17_Chr2g0293481	52.475	101	42	3	261	356	230	329	7.22e-26	108
MsaG003370	MtrunA17_Chr8g0379461	52.222	90	36	1	269	351	45	134	7.94e-26	103
MsaG003370	MtrunA17_Chr2g0319961	53.191	94	28	2	269	351	50	138	1.81e-25	103
MsaG003370	MtrunA17_Chr2g0289181	61.972	71	26	1	290	360	11	80	3.40e-25	102
MsaG003370	MtrunA17_Chr7g0248691	57.831	83	30	1	268	350	134	211	5.35e-25	103
MsaG003370	MtrunA17_Chr8g0348311	57.831	83	30	2	268	350	135	212	3.98e-23	98.6
MsaG003370	MtrunA17_Chr7g0270051	50.562	89	40	1	266	350	22	110	5.08e-23	97.1
MsaG003370	MtrunA17_Chr1g0202461	66.102	59	20	0	294	352	262	320	9.93e-22	95.5
MsaG003370	MtrunA17_Chr8g0387501	54.286	70	28	1	281	350	121	186	2.98e-19	86.7
MsaG003370	MtrunA17_Chr3g0099641	51.389	72	35	0	289	360	247	318	3.32e-19	88.6
MsaG003370	MtrunA17_Chr3g0101131	58.209	67	26	2	289	355	411	475	6.42e-19	88.2
MsaG003370	MtrunA17_Chr4g0042831	46.591	88	45	2	273	360	258	343	7.22e-19	87.0
MsaG003370	MtrunA17_Chr5g0445311	59.016	61	24	1	290	350	361	420	7.67e-19	87.8
MsaG003370	MtrunA17_Chr5g0418191	34.641	153	94	3	208	360	239	385	9.84e-19	87.0
MsaG003370	MtrunA17_Chr5g0418191	53.968	63	26	3	289	350	146	206	1.44e-12	68.6
MsaG003370	MtrunA17_Chr7g0270831	44.565	92	43	1	269	360	200	283	1.10e-18	87.0
MsaG003370	MtrunA17_Chr7g0270191	44.578	83	45	1	268	350	120	201	1.21e-18	85.1
MsaG003370	MtrunA17_Chr1g0150281	47.945	73	36	1	279	351	128	198	1.67e-18	84.7
MsaG003370	MtrunA17_Chr7g0249301	45.361	97	43	4	267	355	258	352	2.04e-18	85.5
MsaG003370	MtrunA17_Chr7g0249301	54.237	59	25	2	294	352	63	119	6.11e-12	66.2
MsaG003370	MtrunA17_Chr4g0051181	57.895	57	24	0	294	350	244	300	2.06e-18	86.3
MsaG003370	MtrunA17_Chr2g0288871	47.436	78	41	0	277	354	289	366	2.55e-18	86.3
MsaG003370	MtrunA17_Chr7g0218081	63.158	57	20	1	294	350	411	466	2.58e-18	86.3
MsaG003370	MtrunA17_Chr7g0218081	53.125	64	27	3	290	352	224	285	3.39e-13	70.5
MsaG003370	MtrunA17_Chr7g0238921	49.367	79	36	2	276	354	110	184	3.55e-18	84.3
MsaG003370	MtrunA17_Chr3g0136961	55.172	58	26	0	294	351	139	196	3.89e-18	83.6
MsaG003370	MtrunA17_Chr4g0001361	43.478	92	48	2	267	354	132	223	5.33e-18	83.6
MsaG003370	MtrunA17_Chr4g0004911	49.351	77	35	2	277	350	317	392	5.89e-18	85.1
MsaG003370	MtrunA17_Chr4g0004911	50.847	59	28	1	294	352	185	242	3.10e-13	70.9
MsaG003370	MtrunA17_Chr7g0263531	57.895	57	23	1	294	350	362	417	6.84e-18	84.7
MsaG003370	MtrunA17_Chr7g0263531	52.055	73	30	4	281	352	178	246	7.69e-15	75.5
MsaG003370	MtrunA17_Chr2g0322391	47.436	78	41	0	277	354	333	410	6.92e-18	85.1
MsaG003370	MtrunA17_Chr4g0074001	57.895	57	23	1	294	350	360	415	1.60e-17	84.0
MsaG003370	MtrunA17_Chr4g0025061	57.895	57	24	0	294	350	361	417	2.24e-17	83.6
MsaG003370	MtrunA17_Chr7g0243891	33.143	175	95	6	196	360	277	439	2.59e-17	83.2
MsaG003370	MtrunA17_Chr7g0243891	52.542	59	26	2	294	352	217	273	6.50e-12	66.6
MsaG003370	MtrunA17_Chr5g0432161	36.508	126	72	2	232	350	353	477	2.87e-17	83.2
MsaG003370	MtrunA17_Chr5g0432161	52.542	59	26	2	294	352	245	301	1.33e-12	68.9
MsaG003370	MtrunA17_Chr3g0106491	48.718	78	39	1	273	350	345	421	3.09e-17	82.8
MsaG003370	MtrunA17_Chr3g0106491	54.237	59	25	2	294	352	199	255	3.42e-13	70.5
MsaG003370	MtrunA17_Chr4g0051881	54.839	62	26	2	294	355	179	238	3.82e-17	81.6
MsaG003370	MtrunA17_Chr7g0216891	56.140	57	25	0	294	350	220	276	4.84e-17	82.4
MsaG003370	MtrunA17_Chr5g0443131	52.239	67	31	1	294	360	158	223	6.15e-17	80.5
MsaG003370	MtrunA17_Chr3g0079691	37.500	112	57	3	251	350	441	551	6.19e-17	82.4
MsaG003370	MtrunA17_Chr3g0079691	52.459	61	27	2	294	354	281	339	2.42e-12	68.2
MsaG003370	MtrunA17_Chr4g0075201	52.308	65	28	1	294	358	268	329	8.37e-17	81.6
MsaG003370	MtrunA17_Chr2g0333851	51.667	60	29	0	291	350	167	226	9.01e-17	80.1
MsaG003370	MtrunA17_Chr1g0150801	38.384	99	58	2	252	350	63	158	1.17e-16	76.6
MsaG003370	MtrunA17_Chr4g0060271	53.448	58	27	0	294	351	256	313	1.18e-16	81.3
MsaG003370	MtrunA17_Chr7g0249311	48.780	82	37	3	277	355	373	452	1.26e-16	81.3
MsaG003370	MtrunA17_Chr7g0249311	52.542	59	26	2	294	352	180	236	3.80e-11	64.3
MsaG003370	MtrunA17_Chr2g0302391	52.459	61	29	0	294	354	212	272	1.45e-16	80.5
MsaG003370	MtrunA17_Chr1g0188941	43.182	88	45	3	268	355	29	111	5.81e-16	73.2
MsaG003370	MtrunA17_Chr1g0150271	46.970	66	34	1	291	356	99	163	6.67e-16	76.6
MsaG003370	MtrunA17_Chr8g0335811	39.583	96	52	3	268	360	126	218	6.89e-16	76.3
MsaG003370	MtrunA17_Chr5g0447701	56.897	58	24	1	294	351	253	309	7.88e-16	78.2
MsaG003370	MtrunA17_Chr5g0418781	41.860	86	49	1	268	353	99	183	2.06e-15	75.5
MsaG003370	MtrunA17_Chr8g0383251	52.459	61	28	1	290	350	105	164	2.13e-15	73.6
MsaG003370	MtrunA17_Chr8g0383351	47.619	63	32	1	289	351	156	217	2.66e-15	74.7
MsaG003370	MtrunA17_Chr1g0194481	39.759	83	49	1	268	350	133	214	2.96e-15	75.9
MsaG003370	MtrunA17_Chr3g0129361	47.619	63	32	1	289	351	140	201	6.51e-15	73.2
MsaG003370	MtrunA17_Chr3g0126391	54.386	57	24	1	294	348	134	190	6.53e-15	75.1
MsaG003370	MtrunA17_Chr4g0025051	56.604	53	23	0	298	350	340	392	1.04e-14	75.5
MsaG003370	MtrunA17_Chr3g0129321	42.500	80	45	1	271	350	96	174	4.26e-14	70.5
MsaG003370	MtrunA17_Chr2g0294231	50.877	57	27	1	294	350	204	259	5.64e-14	72.4
MsaG003370	MtrunA17_Chr7g0275531	52.632	57	25	1	294	348	119	175	1.72e-13	70.5
MsaG003370	MtrunA17_Chr1g0189391	53.846	65	28	2	290	353	94	157	2.10e-13	70.5
MsaG003370	MtrunA17_Chr4g0068541	47.368	57	29	1	294	350	209	264	3.07e-13	70.5
MsaG003370	MtrunA17_Chr7g0248721	42.500	80	41	3	274	350	119	196	5.46e-13	67.8
MsaG003370	MtrunA17_Chr7g0224801	45.161	62	33	1	289	350	89	149	7.75e-13	66.2
MsaG003370	MtrunA17_Chr8g0347251	41.860	86	47	2	266	348	108	193	8.74e-13	68.6
MsaG003370	MtrunA17_Chr8g0387981	41.667	84	46	2	268	348	106	189	1.67e-12	67.8
MsaG003370	MtrunA17_Chr6g0485431	30.968	155	91	5	198	351	73	212	1.95e-12	67.8
MsaG003370	MtrunA17_Chr5g0402931	51.724	58	25	2	293	350	123	177	2.06e-12	65.1
MsaG003370	MtrunA17_Chr4g0024391	46.429	56	30	0	294	349	230	285	8.25e-11	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG003370	AT2G30590.1	55.844	385	132	14	1	356	1	376	1.08e-115	341
MsaG003370	AT3G04670.1	50.959	365	124	13	1	353	1	322	3.67e-104	310
MsaG003370	AT5G28650.1	47.790	362	140	9	1	353	1	322	1.31e-99	298
MsaG003370	AT3G04670.2	47.416	329	118	13	1	317	1	286	1.87e-75	235
MsaG003370	AT4G31550.1	51.087	184	60	6	180	350	137	303	1.29e-53	180
MsaG003370	AT4G31550.2	51.630	184	58	7	180	350	137	302	1.05e-52	177
MsaG003370	AT2G24570.1	56.376	149	51	3	214	350	154	300	1.23e-52	177
MsaG003370	AT4G24240.1	54.545	176	55	6	187	353	182	341	1.47e-52	178
MsaG003370	AT2G23320.1	70.000	110	29	2	245	351	190	298	1.45e-50	172
MsaG003370	AT1G29280.1	55.435	92	34	3	266	350	40	131	3.18e-27	108
MsaG003370	AT4G31550.3	44.218	147	51	7	180	313	137	265	4.72e-26	105
MsaG003370	AT3G58710.2	50.980	102	33	3	269	359	40	135	1.94e-25	103
MsaG003370	AT4G24240.2	47.059	136	47	6	187	313	182	301	2.91e-25	104
MsaG003370	AT2G34830.1	49.524	105	47	2	257	356	174	277	3.08e-25	106
MsaG003370	AT2G34830.2	49.524	105	47	2	257	356	183	286	3.76e-25	105
MsaG003370	AT2G23320.2	66.667	72	20	2	245	313	190	260	8.89e-25	102
MsaG003370	AT3G58710.1	50.000	102	34	3	269	359	41	136	9.78e-25	102
MsaG003370	AT4G01250.1	45.600	125	62	2	227	350	66	185	4.85e-24	100
MsaG003370	AT1G30650.1	52.874	87	36	1	269	350	188	274	1.08e-23	101
MsaG003370	AT5G52830.1	52.941	85	36	1	268	352	144	224	8.80e-22	95.5
MsaG003370	AT5G26170.1	52.308	65	30	1	289	353	109	172	1.21e-19	85.5
MsaG003370	AT4G23550.1	60.317	63	24	1	294	356	141	202	1.58e-19	88.2
MsaG003370	AT4G18170.1	38.017	121	67	3	235	355	120	232	3.21e-19	87.4
MsaG003370	AT2G04880.2	58.209	67	27	1	288	354	278	343	3.56e-19	89.0
MsaG003370	AT2G04880.1	58.209	67	27	1	288	354	302	367	3.68e-19	89.0
MsaG003370	AT5G07100.2	48.837	86	41	3	270	355	119	201	1.16e-18	84.0
MsaG003370	AT5G07100.2	48.529	68	31	2	285	352	19	82	1.36e-12	66.6
MsaG003370	AT5G07100.4	48.837	86	41	3	270	355	119	201	1.16e-18	84.0
MsaG003370	AT5G07100.4	48.529	68	31	2	285	352	19	82	1.36e-12	66.6
MsaG003370	AT5G07100.5	48.837	86	41	3	270	355	119	201	1.16e-18	84.0
MsaG003370	AT5G07100.5	48.529	68	31	2	285	352	19	82	1.36e-12	66.6
MsaG003370	AT5G07100.3	48.837	86	41	3	270	355	119	201	1.16e-18	84.0
MsaG003370	AT5G07100.3	48.529	68	31	2	285	352	19	82	1.36e-12	66.6
MsaG003370	AT1G13960.2	44.211	95	39	2	269	350	219	312	2.65e-18	85.5
MsaG003370	AT1G13960.2	56.452	62	24	3	290	350	72	131	2.32e-14	73.9
MsaG003370	AT2G38470.1	59.016	61	24	1	290	350	359	418	2.71e-18	86.7
MsaG003370	AT2G38470.1	54.237	59	25	2	294	352	185	241	3.44e-13	70.9
MsaG003370	AT4G26640.5	56.716	67	27	2	289	355	201	265	3.53e-18	85.5
MsaG003370	AT4G26640.6	56.716	67	27	2	289	355	201	265	3.53e-18	85.5
MsaG003370	AT4G26640.4	56.716	67	27	2	289	355	201	265	3.53e-18	85.5
MsaG003370	AT4G26640.3	56.716	67	27	2	289	355	201	265	3.53e-18	85.5
MsaG003370	AT4G04450.2	47.561	82	40	1	277	358	182	260	3.61e-18	85.9
MsaG003370	AT4G04450.1	47.561	82	40	1	277	358	276	354	4.59e-18	85.9
MsaG003370	AT5G07100.1	48.837	86	41	3	270	355	212	294	4.68e-18	84.0
MsaG003370	AT5G07100.1	48.529	68	31	2	285	352	112	175	3.10e-12	67.0
MsaG003370	AT1G13960.1	44.211	95	39	2	269	350	372	465	5.16e-18	85.5
MsaG003370	AT1G13960.1	48.101	79	32	4	272	350	215	284	3.71e-14	73.9
MsaG003370	AT4G26640.1	56.716	67	27	2	289	355	305	369	5.92e-18	85.5
MsaG003370	AT1G68150.1	57.895	57	24	0	294	350	236	292	6.20e-18	84.7
MsaG003370	AT4G26640.2	56.716	67	27	2	289	355	377	441	6.75e-18	85.5
MsaG003370	AT4G26640.7	56.716	67	27	2	289	355	337	401	6.92e-18	85.1
MsaG003370	AT5G45050.2	45.783	83	41	1	268	350	1131	1209	8.59e-18	85.5
MsaG003370	AT5G45050.1	45.783	83	41	1	268	350	1159	1237	9.63e-18	85.5
MsaG003370	AT5G45050.4	45.783	83	41	1	268	350	1020	1098	1.10e-17	85.1
MsaG003370	AT1G62300.1	44.186	86	40	1	269	354	296	373	1.77e-17	84.0
MsaG003370	AT4G22070.4	46.154	78	42	0	277	354	281	358	2.59e-17	83.6
MsaG003370	AT4G22070.3	46.154	78	42	0	277	354	281	358	2.59e-17	83.6
MsaG003370	AT4G22070.2	46.154	78	42	0	277	354	281	358	2.59e-17	83.6
MsaG003370	AT4G22070.1	46.154	78	42	0	277	354	281	358	2.59e-17	83.6
MsaG003370	AT1G29860.1	44.595	74	40	1	277	350	120	192	2.89e-17	81.3
MsaG003370	AT2G03340.1	46.154	78	41	1	273	350	395	471	3.01e-17	83.2
MsaG003370	AT2G03340.1	55.556	63	25	3	289	350	245	305	9.67e-14	72.8
MsaG003370	AT5G49520.1	56.140	57	24	1	294	350	222	277	3.38e-17	82.8
MsaG003370	AT4G01720.1	55.738	61	27	0	294	354	240	300	3.79e-17	82.8
MsaG003370	AT4G30935.1	56.140	57	24	1	294	350	332	387	4.22e-17	82.8
MsaG003370	AT5G15130.2	55.172	58	26	0	294	351	186	243	6.02e-17	82.4
MsaG003370	AT5G15130.1	55.172	58	26	0	294	351	228	285	6.52e-17	82.4
MsaG003370	AT4G31800.2	41.096	73	43	0	278	350	96	168	1.54e-16	78.6
MsaG003370	AT5G56270.1	49.351	77	35	2	277	350	468	543	1.73e-16	81.3
MsaG003370	AT5G56270.1	50.820	61	28	2	294	354	274	332	5.03e-11	64.7
MsaG003370	AT3G01080.1	47.436	78	40	1	273	350	286	362	2.08e-16	80.5
MsaG003370	AT3G01080.1	51.562	64	28	3	290	352	163	224	6.92e-13	69.7
MsaG003370	AT2G37260.3	43.137	102	52	2	249	350	230	325	2.17e-16	79.7
MsaG003370	AT2G37260.3	54.237	59	25	2	294	352	86	142	1.04e-12	68.9
MsaG003370	AT3G01080.2	47.436	78	40	1	273	350	324	400	2.35e-16	80.5
MsaG003370	AT3G01080.2	51.562	64	28	3	290	352	201	262	7.23e-13	69.7
MsaG003370	AT4G31800.1	41.096	73	43	0	278	350	161	233	2.43e-16	79.3
MsaG003370	AT2G40740.1	40.426	94	53	2	259	349	138	231	2.47e-16	79.0
MsaG003370	AT2G37260.2	43.137	102	52	2	249	350	228	323	2.58e-16	79.7
MsaG003370	AT2G37260.2	54.237	59	25	2	294	352	84	140	1.17e-12	68.6
MsaG003370	AT2G40740.3	40.860	93	52	2	259	348	147	239	3.42e-16	78.6
MsaG003370	AT4G39410.1	41.860	86	46	2	269	351	196	280	3.43e-16	78.6
MsaG003370	AT2G37260.1	43.137	102	52	2	249	350	310	405	3.52e-16	79.7
MsaG003370	AT2G37260.1	54.237	59	25	2	294	352	166	222	1.19e-12	68.9
MsaG003370	AT5G45260.1	46.237	93	38	4	269	356	1187	1272	4.48e-16	80.5
MsaG003370	AT5G43290.1	49.367	79	36	2	276	354	100	174	4.75e-16	77.8
MsaG003370	AT2G47260.1	40.964	83	48	1	268	350	149	230	8.80e-16	77.8
MsaG003370	AT5G46350.1	51.613	62	28	2	294	355	184	243	1.13e-15	77.4
MsaG003370	AT1G69310.4	41.176	85	49	1	269	353	123	206	1.24e-15	76.6
MsaG003370	AT1G69310.2	41.176	85	49	1	269	353	123	206	1.24e-15	76.6
MsaG003370	AT1G69310.1	41.176	85	49	1	269	353	123	206	1.24e-15	76.6
MsaG003370	AT4G26440.1	46.914	81	41	2	274	354	353	431	1.30e-15	78.6
MsaG003370	AT4G26440.1	51.562	64	28	3	292	354	176	237	1.99e-11	65.9
MsaG003370	AT2G44745.1	38.298	94	52	3	270	360	119	209	1.49e-15	75.5
MsaG003370	AT3G62340.1	43.902	82	45	1	271	352	96	176	1.74e-15	76.3
MsaG003370	AT1G80840.1	36.975	119	62	4	245	350	85	203	1.98e-15	76.6
MsaG003370	AT1G55600.1	50.725	69	30	2	290	358	304	368	2.18e-15	77.8
MsaG003370	AT1G18860.1	54.386	57	26	0	294	350	240	296	2.24e-15	77.8
MsaG003370	AT1G69810.1	46.988	83	35	2	269	350	187	261	4.92e-15	76.3
MsaG003370	AT1G69810.2	46.988	83	35	2	269	350	129	203	5.21e-15	75.5
MsaG003370	AT2G21900.1	56.140	57	24	1	294	350	110	165	6.35e-15	73.2
MsaG003370	AT2G25000.2	49.123	57	29	0	294	350	104	160	6.70e-15	73.6
MsaG003370	AT2G25000.4	49.123	57	29	0	294	350	104	160	6.70e-15	73.6
MsaG003370	AT5G41570.1	43.529	85	44	2	269	350	71	154	7.89e-15	72.4
MsaG003370	AT5G64810.1	49.180	61	30	1	290	350	107	166	1.28e-14	72.0
MsaG003370	AT2G25000.3	49.123	57	29	0	294	350	126	182	1.31e-14	73.2
MsaG003370	AT2G25000.1	49.123	57	29	0	294	350	147	203	1.59e-14	73.6
MsaG003370	AT1G64000.1	38.095	84	51	1	267	350	88	170	2.58e-14	71.2
MsaG003370	AT2G46130.1	50.000	62	30	1	289	350	26	86	2.60e-14	68.9
MsaG003370	AT2G30250.1	42.857	84	43	4	275	355	307	388	4.19e-14	73.6
MsaG003370	AT3G01970.1	47.619	63	32	1	289	351	61	122	1.16e-13	68.2
MsaG003370	AT3G01080.3	51.562	64	28	3	290	352	201	262	5.20e-13	69.7
MsaG003370	AT5G13080.1	45.161	62	33	1	289	350	63	123	9.07e-13	65.5
MsaG003370	AT4G11070.1	36.975	119	63	3	233	348	89	198	2.35e-12	67.4
MsaG003370	AT4G11070.2	36.975	119	63	3	233	348	57	166	2.57e-12	67.0
MsaG003370	AT4G23810.1	45.882	85	43	2	268	349	132	216	5.89e-12	66.2
MsaG003370	AT1G69310.3	38.824	85	47	2	269	353	123	202	1.99e-11	64.3
MsaG003370	AT1G66560.1	47.458	59	29	1	292	348	102	160	9.28e-11	62.0

Find 79 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAAGAGAAAGTGGATTTCTT+AGG	0.196128	1:+55582527	None:intergenic
CATGCAGTTCATGCATTTGC+AGG	0.256684	1:+55581171	None:intergenic
TTCTCTTGGAAACCCTTCTT+TGG	0.278708	1:-55582512	MsaT003370.1:CDS
AAAGTTGTGTCTTTGCTTCA+TGG	0.278912	1:-55582724	MsaT003370.1:CDS
TAGTAGCCTTGTCAAAATTA+AGG	0.303036	1:+55582287	None:intergenic
TAGAGTGAAGAGATCAATTA+AGG	0.339973	1:-55581943	MsaT003370.1:CDS
CAAAATTCAGTTCAGGAACT+TGG	0.342737	1:-55582556	MsaT003370.1:CDS
GGAAGTTCCTTCCATTTGAT+TGG	0.353546	1:-55582187	MsaT003370.1:CDS
TGTGTCTTTGCTTCATGGTT+TGG	0.359375	1:-55582719	MsaT003370.1:CDS
GTTTGGATCATTCAAGAGTT+AGG	0.362142	1:-55582702	MsaT003370.1:CDS
AAGAAAGCAGTTTGAGGATA+AGG	0.371998	1:+55582655	None:intergenic
CTAAGAAATCCACTTTCTCT+TGG	0.374963	1:-55582526	MsaT003370.1:CDS
CGCTCAACATGCTTCCTAGC+AGG	0.378003	1:+55581267	None:intergenic
AGGAATTTAACTGTTGAAAC+TGG	0.385192	1:-55582769	MsaT003370.1:CDS
GTGATTATGCTCGCCTTCAT+AGG	0.392014	1:+55581212	None:intergenic
TAAGTATGTTGTCTCAATCA+TGG	0.418754	1:-55582807	MsaT003370.1:CDS
CATGGGATCAAGTTCATCAT+AGG	0.429367	1:-55582789	MsaT003370.1:CDS
TTATGCCGCTGGTGTTCCTT+CGG	0.429874	1:+55582311	None:intergenic
TTTGAACTCAATTCCAAAGA+AGG	0.431276	1:+55582499	None:intergenic
CTATCCTCAAAATTCAGTTC+AGG	0.434300	1:-55582563	MsaT003370.1:CDS
CACCAACAATGTCGTCTACT+AGG	0.435790	1:-55582258	MsaT003370.1:CDS
CTTTGGAATTGAGTTCAAAC+GGG	0.435936	1:-55582495	MsaT003370.1:CDS
AAGAGAAAGTGGATTTCTTA+GGG	0.437226	1:+55582528	None:intergenic
TAGGTAACCATTAGCATAGT+AGG	0.453570	1:+55581231	None:intergenic
GGGTGAGGAGAGCCCTTGAT+AGG	0.454162	1:+55581849	None:intergenic
TGCAGGTTGTGTTGGTACCT+TGG	0.458215	1:+55581188	None:intergenic
AGAAAGCAGTTTGAGGATAA+GGG	0.460093	1:+55582656	None:intergenic
AGATCGGAGCTCCAATCAAA+TGG	0.468483	1:+55582176	None:intergenic
ATGCTAATGGTTACCTATGA+AGG	0.471493	1:-55581225	MsaT003370.1:CDS
TTCCTCCATGAGTAATCATC+AGG	0.472648	1:+55581885	None:intergenic
GCATGAGAGGCTGCCCTGCT+AGG	0.472837	1:-55581281	MsaT003370.1:CDS
TCTTTGGAATTGAGTTCAAA+CGG	0.478409	1:-55582496	MsaT003370.1:CDS
GGATGAGCCTACTATGCTAA+TGG	0.481224	1:-55581238	MsaT003370.1:CDS
TTTGTTGCTGCAGCTGCTGT+TGG	0.487273	1:+55582395	None:intergenic
AAAATTAAGGCTTATGCCGC+TGG	0.488025	1:+55582300	None:intergenic
GAAGGGTTTCCAAGAGAAAG+TGG	0.494949	1:+55582517	None:intergenic
GCAAGCTTGTTGCTGATAGC+AGG	0.495556	1:+55581918	None:intergenic
GATTACTCATGGAGGAAGTA+CGG	0.498681	1:-55581879	MsaT003370.1:CDS
TTGAACTCAATTCCAAAGAA+GGG	0.509941	1:+55582500	None:intergenic
GTACGGGCAGAAGCCTATCA+AGG	0.510514	1:-55581862	MsaT003370.1:CDS
CATGCATTTGCAGGTTGTGT+TGG	0.511678	1:+55581180	None:intergenic
GACCTAGTAGACGACATTGT+TGG	0.517470	1:+55582256	None:intergenic
AAACTGGTGAAGCTGTGAAT+AGG	0.523498	1:-55582753	MsaT003370.1:CDS
ATTACCTCTTCTTTGAGCAA+TGG	0.528866	1:+55582068	None:intergenic
GAAGCATGTTGAGCGGTGCT+TGG	0.533891	1:-55581259	MsaT003370.1:CDS
TTGTCTAAGAAAGCAGTTTG+AGG	0.538734	1:+55582649	None:intergenic
TCCCTCCTGATGATTACTCA+TGG	0.545497	1:-55581890	MsaT003370.1:CDS
AAGTATGTTGTCTCAATCAT+GGG	0.546722	1:-55582806	MsaT003370.1:CDS
GGAAGCGTGGCTAACGTGGA+TGG	0.552072	1:-55582208	MsaT003370.1:CDS
AATGCCATTGCTCAAAGAAG+AGG	0.554797	1:-55582072	MsaT003370.1:intron
ATTTCCTCCTTGAGCATAGA+CGG	0.557646	1:-55582229	MsaT003370.1:CDS
ATTACTCATGGAGGAAGTAC+GGG	0.557772	1:-55581878	MsaT003370.1:CDS
GAATTCTGATCTGAAGAGAT+CGG	0.560341	1:+55582160	None:intergenic
CACGCTTCCGTCTATGCTCA+AGG	0.561562	1:+55582222	None:intergenic
AGACGGAAGCGTGGCTAACG+TGG	0.565434	1:-55582212	MsaT003370.1:CDS
TCAAGGGCTCTCCTCACCCT+AGG	0.577561	1:-55581845	MsaT003370.1:intron
ATGTTCTGCTAGAGGTGATG+AGG	0.577879	1:-55582122	MsaT003370.1:CDS
TATAAGTGCAGCAGCATGAG+AGG	0.580000	1:-55581294	MsaT003370.1:CDS
ATCAGAATTCACAGCACAAG+AGG	0.581042	1:-55582147	MsaT003370.1:CDS
TGCTATCAGCAACAAGCTTG+CGG	0.581834	1:-55581916	MsaT003370.1:CDS
GCTCAACATGCTTCCTAGCA+GGG	0.583433	1:+55581268	None:intergenic
CGGAGCTCCAATCAAATGGA+AGG	0.586112	1:+55582180	None:intergenic
GCTTGTTGAGCAAGGTGAAG+CGG	0.587298	1:+55582466	None:intergenic
CTCCATGAGTAATCATCAGG+AGG	0.604331	1:+55581888	None:intergenic
AACAGCAGCTGCAGCAACAA+AGG	0.622186	1:-55582393	MsaT003370.1:CDS
TGTTCTGCTAGAGGTGATGA+GGG	0.623984	1:-55582121	MsaT003370.1:CDS
AAGCTGAAATGATGTTCCGA+AGG	0.624862	1:-55582327	MsaT003370.1:CDS
AAGAGGAAATGTTCTGCTAG+AGG	0.625674	1:-55582130	MsaT003370.1:CDS
TTGATGCAGCTTGTTGAGCA+AGG	0.628338	1:+55582458	None:intergenic
TCCATGAGTAATCATCAGGA+GGG	0.631195	1:+55581889	None:intergenic
GGTTGGACATACCTAGGGTG+AGG	0.641458	1:+55581834	None:intergenic
TACGGGCAGAAGCCTATCAA+GGG	0.654538	1:-55581861	MsaT003370.1:CDS
CTGCTAGGAAGCATGTTGAG+CGG	0.660945	1:-55581266	MsaT003370.1:CDS
CTTGAGCATAGACGGAAGCG+TGG	0.674043	1:-55582221	MsaT003370.1:CDS
AGGCGAGCATAATCACGCCA+AGG	0.679418	1:-55581205	MsaT003370.1:CDS
CTCCTGATGATTACTCATGG+AGG	0.692245	1:-55581887	MsaT003370.1:CDS
TGGTGATGATGCTGTTGCTG+CGG	0.703851	1:+55582415	None:intergenic
ATGTTCCGAAGGAACACCAG+CGG	0.729358	1:-55582316	MsaT003370.1:CDS
GCTTCCGTCTATGCTCAAGG+AGG	0.768540	1:+55582225	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	55581179	55582884	55581179	ID=MsaG003370
Chr1	mRNA	55581179	55582884	55581179	ID=MsaT003370.1;Parent=MsaG003370
Chr1	exon	55581179	55581323	55581179	ID=MsaT003370.1.exon3;Parent=MsaT003370.1
Chr1	CDS	55581179	55581323	55581179	ID=cds.MsaT003370.1;Parent=MsaT003370.1
Chr1	exon	55581846	55581971	55581846	ID=MsaT003370.1.exon2;Parent=MsaT003370.1
Chr1	CDS	55581846	55581971	55581846	ID=cds.MsaT003370.1;Parent=MsaT003370.1
Chr1	exon	55582073	55582884	55582073	ID=MsaT003370.1.exon1;Parent=MsaT003370.1
Chr1	CDS	55582073	55582884	55582073	ID=cds.MsaT003370.1;Parent=MsaT003370.1

Gene Sequence

>MsaT003370.1

ATGGAAGAAGTTGAACAAGCAAGCAGAACAGCTGTTGAAAGCTGTCATAGAGTTCTAAGTATGTTGTCTCAATCATGGGATCAAGTTCATCATAGGAATTTAACTGTTGAAACTGGTGAAGCTGTGAATAGGTTCAAGAAAGTTGTGTCTTTGCTTCATGGTTTGGATCATTCAAGAGTTAGGAAGCTTAAAAATCTTCAAAATGTCCCTTATCCTCAAACTGCTTTCTTAGACAACCCAAATTGCAAAAGAAACATCATCAACCATCACACCAAAAATGTTCACTTTACTCAAACTACCTATCCTCAAAATTCAGTTCAGGAACTTGGTTCAACCCTAAGAAATCCACTTTCTCTTGGAAACCCTTCTTTGGAATTGAGTTCAAACGGGAAAAGTCCGCTTCACCTTGCTCAACAAGCTGCATCAAATCACTATCAGTTCTATCAGCCGCAGCAACAGCATCATCACCAACAGCAGCTGCAGCAACAAAGGTTGTTGTTGCAGCAGCAGCAACAGCAGCAACAAATGAAGCATCAAGCTGAAATGATGTTCCGAAGGAACACCAGCGGCATAAGCCTTAATTTTGACAAGGCTACTAGCAGCACACCAACAATGTCGTCTACTAGGTCTTTCATTTCCTCCTTGAGCATAGACGGAAGCGTGGCTAACGTGGATGGAAGTTCCTTCCATTTGATTGGAGCTCCGATCTCTTCAGATCAGAATTCACAGCACAAGAGGAAATGTTCTGCTAGAGGTGATGAGGGAAGCTTGAAATGTAGTAGCAGTTCTAAATGCCATTGCTCAAAGAAGAGGAAGCATAGAGTGAAGAGATCAATTAAGGTGCCTGCTATCAGCAACAAGCTTGCGGATATCCCTCCTGATGATTACTCATGGAGGAAGTACGGGCAGAAGCCTATCAAGGGCTCTCCTCACCCTAGGGGGTATTATAAGTGCAGCAGCATGAGAGGCTGCCCTGCTAGGAAGCATGTTGAGCGGTGCTTGGATGAGCCTACTATGCTAATGGTTACCTATGAAGGCGAGCATAATCACGCCAAGGTACCAACACAACCTGCAAATGCATGA

Protein sequence

>MsaT003370.1

MEEVEQASRTAVESCHRVLSMLSQSWDQVHHRNLTVETGEAVNRFKKVVSLLHGLDHSRVRKLKNLQNVPYPQTAFLDNPNCKRNIINHHTKNVHFTQTTYPQNSVQELGSTLRNPLSLGNPSLELSSNGKSPLHLAQQAASNHYQFYQPQQQHHHQQQLQQQRLLLQQQQQQQQMKHQAEMMFRRNTSGISLNFDKATSSTPTMSSTRSFISSLSIDGSVANVDGSSFHLIGAPISSDQNSQHKRKCSARGDEGSLKCSSSSKCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLDEPTMLMVTYEGEHNHAKVPTQPANA*