AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG003516

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG003516 MtrunA17_Chr1g0186431 98.551 759 11 0 1 759 1 759 0.0 1541
MsaG003516 MtrunA17_Chr1g0168161 71.278 759 211 6 1 754 1 757 0.0 1067
MsaG003516 MtrunA17_Chr7g0274831 57.625 741 301 6 23 757 28 761 0.0 885
MsaG003516 MtrunA17_Chr1g0190021 56.876 749 305 9 19 757 18 758 0.0 840
MsaG003516 MtrunA17_Chr4g0013831 41.970 741 397 18 29 750 5 731 1.77e-177 526
MsaG003516 MtrunA17_Chr7g0269631 40.729 631 349 13 29 645 5 624 1.25e-129 399
MsaG003516 MtrunA17_Chr4g0077091 86.667 75 9 1 686 759 1 75 1.93e-35 128
MsaG003516 MtrunA17_Chr8g0377481 31.579 133 82 3 631 755 837 968 6.70e-15 79.0
MsaG003516 MtrunA17_Chr8g0377481 22.959 392 244 10 344 690 371 749 7.25e-14 75.9
MsaG003516 MtrunA17_Chr5g0405701 25.369 339 209 8 355 665 499 821 9.82e-15 78.6
MsaG003516 MtrunA17_Chr3g0122391 30.534 131 83 3 631 754 895 1024 4.41e-14 76.6
MsaG003516 MtrunA17_Chr3g0122391 21.888 466 307 11 344 758 419 878 6.65e-14 75.9
MsaG003516 MtrunA17_Chr5g0447641 21.778 450 294 11 344 741 596 1039 1.27e-13 75.1
MsaG003516 MtrunA17_Chr8g0371601 22.687 335 224 8 355 665 461 784 1.61e-13 74.7
MsaG003516 MtrunA17_Chr8g0392301 22.653 490 290 13 344 757 362 838 1.90e-12 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG003516 AT3G23150.1 59.847 782 278 13 1 758 1 770 0.0 884
MsaG003516 AT3G04580.2 58.043 746 294 12 23 754 21 761 0.0 830
MsaG003516 AT3G04580.1 58.043 746 294 12 23 754 21 761 0.0 830
MsaG003516 AT3G23150.2 61.937 599 202 10 1 582 1 590 0.0 692
MsaG003516 AT1G04310.1 53.859 622 255 10 9 612 16 623 0.0 595
MsaG003516 AT1G04310.2 53.859 622 255 10 9 612 16 623 0.0 595
MsaG003516 AT1G66340.1 39.685 761 400 18 29 757 4 737 1.28e-170 509
MsaG003516 AT2G40940.1 40.981 571 321 10 29 589 4 568 4.52e-125 387
MsaG003516 AT5G35750.1 24.524 473 291 15 332 758 565 1017 6.60e-19 92.4
MsaG003516 AT5G35750.1 30.263 152 83 3 624 754 1024 1173 6.73e-13 73.2
MsaG003516 AT1G27320.1 21.875 480 307 10 325 757 410 868 1.45e-16 85.1
MsaG003516 AT1G27320.1 26.966 178 99 5 603 754 856 1028 5.73e-12 70.1
MsaG003516 AT2G01830.5 23.978 367 224 8 344 661 440 800 1.96e-12 71.6
MsaG003516 AT2G01830.5 29.851 134 81 3 630 751 929 1061 3.63e-11 67.4
MsaG003516 AT2G01830.1 23.577 369 223 9 344 661 428 788 2.14e-12 71.6
MsaG003516 AT2G01830.1 29.851 134 81 3 630 751 917 1049 3.44e-11 67.4
MsaG003516 AT2G01830.4 23.577 369 223 9 344 661 428 788 2.14e-12 71.6
MsaG003516 AT2G01830.4 29.851 134 81 3 630 751 917 1049 3.44e-11 67.4
MsaG003516 AT2G01830.6 23.577 369 223 9 344 661 428 788 2.14e-12 71.6
MsaG003516 AT2G01830.6 29.851 134 81 3 630 751 917 1049 3.44e-11 67.4
MsaG003516 AT2G01830.3 23.577 369 223 9 344 661 428 788 2.14e-12 71.6
MsaG003516 AT2G01830.3 29.851 134 81 3 630 751 917 1049 3.44e-11 67.4
MsaG003516 AT2G17820.1 30.935 139 95 1 355 492 488 626 2.50e-12 71.2
MsaG003516 AT2G01830.2 23.577 369 223 9 344 661 451 811 2.96e-12 70.9
MsaG003516 AT2G01830.2 29.851 134 81 3 630 751 940 1072 3.29e-11 67.8

Find 174 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGGCCTATGCACTCGATTT+TGG 0.157778 1:+58080202 MsaT003516.1:CDS
TTTCTGAATGGTTGGACTTA+TGG 0.204071 1:+58079351 MsaT003516.1:CDS
GTGGACTATTGAGAGTATTT+TGG 0.244417 1:+58079179 MsaT003516.1:CDS
CCTTTGGAGATAAGGTCTTT+TGG 0.244781 1:+58080365 MsaT003516.1:CDS
CAAATGCATGTGTGTTTATA+AGG 0.254306 1:+58080424 MsaT003516.1:CDS
TTCCATTCAAGTCATTCTTT+TGG 0.259941 1:+58081650 MsaT003516.1:CDS
GGAAGTTTAAAAGCGGAAAT+AGG 0.304993 1:+58081721 MsaT003516.1:CDS
GCAGTCAAGGCAACAATTAT+AGG 0.308408 1:-58081744 None:intergenic
GTCTTTACCAAACCATGTTA+TGG 0.315997 1:+58080475 MsaT003516.1:CDS
GCGCTTGCTGTTTCCAGTCT+TGG 0.319928 1:+58079831 MsaT003516.1:CDS
CAGACCTCTCAACATTGAAT+TGG 0.323833 1:-58081496 None:intergenic
AGCTCAGTGTCCTCAGGTCC+CGG 0.332201 1:+58080719 MsaT003516.1:CDS
AATTAAGGTGGTTGCTGATC+AGG 0.332673 1:+58080019 MsaT003516.1:CDS
TTCTTCTTCGGTTTCAATTA+CGG 0.333952 1:+58081418 MsaT003516.1:CDS
TGTATGCAGATTGGTGTTAA+TGG 0.343123 1:+58081795 MsaT003516.1:CDS
GTGGAGCTTTCGAAAACATT+AGG 0.351077 1:+58079645 MsaT003516.1:CDS
CATATTGGTCTTGATTCTTC+CGG 0.355811 1:+58079956 MsaT003516.1:CDS
GTAAATATTAGATTTGAGAT+AGG 0.360085 1:+58080668 MsaT003516.1:CDS
TCAGGCTTGTTATGCCATAT+TGG 0.362096 1:+58079941 MsaT003516.1:CDS
TGCTTCTCAAAGTGAAGGTC+AGG 0.367109 1:+58079475 MsaT003516.1:CDS
TTTGAATGCCTTACTGTCAT+TGG 0.369155 1:+58081615 MsaT003516.1:CDS
CTCCAAATGCCTGATATAGA+TGG 0.374320 1:+58081675 MsaT003516.1:CDS
CTTATAAACACACATGCATT+TGG 0.375755 1:-58080423 None:intergenic
TCAGGAGCTGGAGATAATTA+AGG 0.381209 1:+58080004 MsaT003516.1:CDS
TCTTTACCAAACCATGTTAT+GGG 0.386190 1:+58080476 MsaT003516.1:CDS
ATCCATCTATATCAGGCATT+TGG 0.388907 1:-58081677 None:intergenic
GGATGATGGAAGATTTCCTT+TGG 0.389319 1:+58080349 MsaT003516.1:CDS
ACAACATCTGGATCAGTAAT+CGG 0.399774 1:-58079762 None:intergenic
TACTATTCTGTATACTACTT+TGG 0.402484 1:+58079623 MsaT003516.1:CDS
TGAGGAATACCGTGAGTATA+TGG 0.405398 1:-58081384 None:intergenic
GCTCGAACGTCCCTTTCAAA+TGG 0.406052 1:+58079280 MsaT003516.1:CDS
AAAGCATGACACTTCTTCTT+CGG 0.410525 1:+58081406 MsaT003516.1:CDS
GGATTGTAACCATGGGGAAG+GGG 0.412828 1:+58080550 MsaT003516.1:CDS
ACTTCGAATCCATCTATATC+AGG 0.414647 1:-58081684 None:intergenic
GATCCTAGTATTTCGAGTTT+CGG 0.416197 1:+58080574 MsaT003516.1:CDS
GCTCAGTGTCCTCAGGTCCC+GGG 0.416308 1:+58080720 MsaT003516.1:CDS
TTCCGTGACTTCCGCTTCTA+CGG 0.417846 1:+58081590 MsaT003516.1:CDS
TCAACTTATGAGAGAGAAGT+TGG 0.419273 1:+58080082 MsaT003516.1:CDS
CTTTAAGATTCTCACTGCCT+TGG 0.419423 1:+58079410 MsaT003516.1:CDS
AGTCAAGGGAGGAATGAAAA+AGG 0.420629 1:+58080608 MsaT003516.1:CDS
GAAGATTTCCTTTGGAGATA+AGG 0.424573 1:+58080357 MsaT003516.1:CDS
GATTGTAACCATGGGGAAGG+GGG 0.427873 1:+58080551 MsaT003516.1:CDS
TCCGTGACTTCCGCTTCTAC+GGG 0.428889 1:+58081591 MsaT003516.1:CDS
GAATGCTATGATGGCAAGCC+AGG 0.432214 1:+58080139 MsaT003516.1:CDS
CATGTGTGTTTATAAGGGCT+TGG 0.432309 1:+58080430 MsaT003516.1:CDS
TCGAAGTCGCCGCAAGGATT+CGG 0.432385 1:+58081700 MsaT003516.1:CDS
ACCTAGATCTTGGAGCAATC+AGG 0.441634 1:+58079986 MsaT003516.1:CDS
CTGCCGAAACTCGAAATACT+AGG 0.444425 1:-58080577 None:intergenic
GCTCCAAGATCTAGGTTCTT+CGG 0.445823 1:-58079979 None:intergenic
TTCTTCTGCACTTGCAGTCA+AGG 0.446455 1:-58081757 None:intergenic
ACTAGATGAGCTTGGTCTCC+AGG 0.446804 1:-58080639 None:intergenic
AGTTGATGCAAGGAAACTTA+TGG 0.447288 1:+58081355 MsaT003516.1:intron
ATGTGTGTTTATAAGGGCTT+GGG 0.448667 1:+58080431 MsaT003516.1:CDS
TCATCACCCATAACATGGTT+TGG 0.448703 1:-58080482 None:intergenic
TCCTGATTGCTCCAAGATCT+AGG 0.449928 1:-58079987 None:intergenic
CGGAAGAATCAAGACCAATA+TGG 0.450177 1:-58079955 None:intergenic
GGCATTCGAATGGCAGCAAC+CGG 0.452555 1:-58079873 None:intergenic
GCAATTCCTTGCATCAAAAC+CGG 0.454415 1:-58081831 None:intergenic
CGGCCGAAGAACCTAGATCT+TGG 0.454895 1:+58079976 MsaT003516.1:CDS
CTCGAACGTCCCTTTCAAAT+GGG 0.457846 1:+58079281 MsaT003516.1:CDS
GCGCAATCGAGCTTTGCAAC+TGG 0.458884 1:+58080109 MsaT003516.1:CDS
AACAGTAGTGATTCTGAAGT+TGG 0.461479 1:+58080695 MsaT003516.1:CDS
TAATGGAGTAATCCGAAAAC+CGG 0.467924 1:+58081812 MsaT003516.1:CDS
GCATATGGTTGGGAATCTAC+TGG 0.475238 1:+58080529 MsaT003516.1:CDS
ACGAAATAAAGCAACTCAAG+AGG 0.478092 1:-58079252 None:intergenic
AGAAGAAGTGTCATGCTTTG+AGG 0.480685 1:-58081402 None:intergenic
GAATGCTTACTCAAGAGATT+CGG 0.482071 1:+58079583 MsaT003516.1:CDS
AAGTCATGAGTGATGGTATG+AGG 0.483265 1:+58080180 MsaT003516.1:CDS
TGGGATCTTGGACGGGAGGT+TGG 0.484581 1:+58079522 MsaT003516.1:CDS
GTTGGCAGCTCAGTGTCCTC+AGG 0.485068 1:+58080713 MsaT003516.1:CDS
TCTGAAATGAGTTTCTTGCC+TGG 0.486268 1:-58080157 None:intergenic
ATCCAAAAGAATGACTTGAA+TGG 0.489294 1:-58081652 None:intergenic
AAATGCATGTGTGTTTATAA+GGG 0.490040 1:+58080425 MsaT003516.1:CDS
TGGTCTTATTATGAAGCAAA+AGG 0.490084 1:+58079542 MsaT003516.1:CDS
TAAATATTAGATTTGAGATA+GGG 0.495686 1:+58080669 MsaT003516.1:CDS
ATATACCAGTGATAGATATG+AGG 0.497274 1:+58080751 MsaT003516.1:CDS
ATCTTGGAGCAATCAGGAGC+TGG 0.497970 1:+58079992 MsaT003516.1:CDS
TCCTTTGCTTCTCAAAGTGA+AGG 0.498700 1:+58079470 MsaT003516.1:CDS
CTCAGTGTCCTCAGGTCCCG+GGG 0.500200 1:+58080721 MsaT003516.1:CDS
TCATCATCACAATTACATCT+AGG 0.500845 1:-58079147 None:intergenic
GACAGCTCTGCAAAGGATGA+TGG 0.501785 1:+58080335 MsaT003516.1:CDS
TCCCGTAGAAGCGGAAGTCA+CGG 0.504322 1:-58081592 None:intergenic
TTTCGAGTTTCGGCAGACGC+TGG 0.505966 1:+58080584 MsaT003516.1:CDS
TGGATTGTAACCATGGGGAA+GGG 0.508641 1:+58080549 MsaT003516.1:CDS
TATTCTGTATACTACTTTGG+TGG 0.509087 1:+58079626 MsaT003516.1:CDS
GAGAGGTCTGCAAGTTCTGT+TGG 0.509235 1:+58081509 MsaT003516.1:CDS
ATTGTAACCATGGGGAAGGG+GGG 0.512664 1:+58080552 MsaT003516.1:CDS
TGGTGATTTCTTGATTGCTG+TGG 0.516847 1:+58079215 MsaT003516.1:CDS
AAGTGCAGAAGAAGATTTGT+GGG 0.517262 1:+58081767 MsaT003516.1:CDS
CTTACTGTCATTGGACCTGT+TGG 0.517705 1:+58081624 MsaT003516.1:CDS
ACCTTCACTTTGAGAAGCAA+AGG 0.521628 1:-58079471 None:intergenic
CAACAGGTCCAATGACAGTA+AGG 0.522523 1:-58081623 None:intergenic
CTCAAGAGGGATTGAGAAGT+AGG 0.523719 1:-58079238 None:intergenic
TGTTTCTAGTGACGCAGGAC+CGG 0.528437 1:+58079854 MsaT003516.1:CDS
GTTGCGTTCTGAAGATTCCC+CGG 0.528905 1:-58081469 None:intergenic
AAATTACAAACACGTAACAT+TGG 0.530189 1:-58079894 None:intergenic
GGCGAGAAGGAATGCTATGA+TGG 0.531744 1:+58080130 MsaT003516.1:CDS
TCGGCAGACGCTGGAAGTCA+AGG 0.534100 1:+58080593 MsaT003516.1:CDS
CATCATTTATCAAGTTTGAG+AGG 0.538740 1:-58080307 None:intergenic
ATCTACTGGATTGTAACCAT+GGG 0.542949 1:+58080543 MsaT003516.1:CDS
TTGCGTTCTGAAGATTCCCC+GGG 0.544742 1:-58081468 None:intergenic
GAACAAGGACCCATTTGAAA+GGG 0.546654 1:-58079290 None:intergenic
TCTGCCCTCATATCTATCAC+TGG 0.547398 1:-58080756 None:intergenic
CTCAAGAGAATTCTGATGCA+AGG 0.547515 1:+58081861 MsaT003516.1:CDS
TGAACAAGGACCCATTTGAA+AGG 0.548158 1:-58079291 None:intergenic
GCAATAGCCATCTCTGAACC+CGG 0.551030 1:+58081450 MsaT003516.1:CDS
GGCAGTGAGAATCTTAAAGA+TGG 0.551039 1:-58079406 None:intergenic
ACTTGAATGGAAGATCCAAC+AGG 0.554016 1:-58081639 None:intergenic
CAAGTGCAGAAGAAGATTTG+TGG 0.554779 1:+58081766 MsaT003516.1:CDS
AAACTTGATAAATGATGCCA+TGG 0.555930 1:+58080313 MsaT003516.1:CDS
TAACAAGCCTGAGTTAGCTC+AGG 0.557598 1:-58079930 None:intergenic
ACATCACCACTAGATGAGCT+TGG 0.559230 1:-58080647 None:intergenic
CGAAATAAAGCAACTCAAGA+GGG 0.560282 1:-58079251 None:intergenic
TTCAGAGATGGCTATTGCAA+TGG 0.562065 1:-58081445 None:intergenic
TGTTAATTGCAGTTGATGCA+AGG 0.562733 1:+58081345 MsaT003516.1:intron
TATTTGCAAGAGGATAGTCC+AGG 0.567491 1:+58080790 MsaT003516.1:CDS
AATCTACTGGATTGTAACCA+TGG 0.568873 1:+58080542 MsaT003516.1:CDS
TGGGAAAGATGTATGCAGAT+TGG 0.570128 1:+58081786 MsaT003516.1:CDS
ATCCTTTGCAGAGCTGTCCA+TGG 0.572923 1:-58080330 None:intergenic
GTGATGATGAGAACAGTTTG+TGG 0.575845 1:+58079160 MsaT003516.1:CDS
CTGGATTGTAACCATGGGGA+AGG 0.575928 1:+58080548 MsaT003516.1:CDS
AAAGACATGGGATCTTGGAC+GGG 0.576526 1:+58079515 MsaT003516.1:CDS
AAAAGACATGGGATCTTGGA+CGG 0.578361 1:+58079514 MsaT003516.1:CDS
GAATGAACAGAAGCTTATTG+TGG 0.580973 1:+58080259 MsaT003516.1:CDS
CAATAGCCATCTCTGAACCC+GGG 0.581848 1:+58081451 MsaT003516.1:CDS
TCCTCTCATCACCCATAACA+TGG 0.582290 1:-58080487 None:intergenic
GTCACTAGAAACACCAAGAC+TGG 0.584089 1:-58079844 None:intergenic
CAAGATCTAGGTTCTTCGGC+CGG 0.584183 1:-58079975 None:intergenic
CAGAATAGTATGTCTATCGA+GGG 0.585211 1:-58079610 None:intergenic
GAGATGGCTATTGCAATGGA+AGG 0.587280 1:-58081441 None:intergenic
CGGCAGACGCTGGAAGTCAA+GGG 0.589768 1:+58080594 MsaT003516.1:CDS
TGAGCTTTAGTATTTGCAAG+AGG 0.590203 1:+58080780 MsaT003516.1:CDS
AGGAACACCTGAGCTAACTC+AGG 0.590712 1:+58079923 MsaT003516.1:CDS
TGCAGCATGCGATAGAGCCA+CGG 0.591811 1:-58080045 None:intergenic
CCAAAAGACCTTATCTCCAA+AGG 0.594431 1:-58080365 None:intergenic
ACCATGTTATGGGTGATGAG+AGG 0.595070 1:+58080486 MsaT003516.1:CDS
ATGTTATGGGTGATGAGAGG+AGG 0.595173 1:+58080489 MsaT003516.1:CDS
GAGCTTTGCAACTGGCGAGA+AGG 0.595611 1:+58080117 MsaT003516.1:CDS
AGATTCCCCGGGTTCAGAGA+TGG 0.597080 1:-58081457 None:intergenic
GCTTCTCAAAGTGAAGGTCA+GGG 0.597196 1:+58079476 MsaT003516.1:CDS
ATGGATTCGAAGTCGCCGCA+AGG 0.597554 1:+58081694 MsaT003516.1:CDS
TCACTCATGAATTGAACGCA+AGG 0.600049 1:+58079721 MsaT003516.1:CDS
GCATTCAAATCCCGTAGAAG+CGG 0.602716 1:-58081601 None:intergenic
TATTCCAATTCAATGTTGAG+AGG 0.606759 1:+58081492 MsaT003516.1:CDS
TGTTATGGGTGATGAGAGGA+GGG 0.608371 1:+58080490 MsaT003516.1:CDS
ACTGGTATATGTCCTACCCC+CGG 0.609146 1:-58080738 None:intergenic
AAACACACATGCATTTGGCA+AGG 0.611821 1:-58080418 None:intergenic
GACATGGGATCTTGGACGGG+AGG 0.611959 1:+58079518 MsaT003516.1:CDS
TTTCAGAAAGTCATGAGTGA+TGG 0.612216 1:+58080173 MsaT003516.1:CDS
AGATACACACAAGAGGATAG+AGG 0.612399 1:-58079103 None:intergenic
TTTAAACTTCCGAATCCTTG+CGG 0.614777 1:-58081709 None:intergenic
ACAGAATAGTATGTCTATCG+AGG 0.617871 1:-58079611 None:intergenic
TATACCAGTGATAGATATGA+GGG 0.618668 1:+58080752 MsaT003516.1:CDS
CTTGGTGTTTCTAGTGACGC+AGG 0.622071 1:+58079849 MsaT003516.1:CDS
AATCCCAAAATCGAGTGCAT+AGG 0.622628 1:-58080206 None:intergenic
ACGTAACATTGGCATTCGAA+TGG 0.630068 1:-58079883 None:intergenic
GATGCAAGGAAACTTATGGT+TGG 0.630539 1:+58081359 MsaT003516.1:CDS
CGCAGTTGCACAAGACACCA+AGG 0.633662 1:-58079427 None:intergenic
TGCCATGGACAGCTCTGCAA+AGG 0.638516 1:+58080328 MsaT003516.1:CDS
TCTTATTATGAAGCAAAAGG+AGG 0.642117 1:+58079545 MsaT003516.1:CDS
GGTTGCTGATCAGGTTGCCG+TGG 0.646373 1:+58080028 MsaT003516.1:CDS
TAAAAGCAATGAACTGAACA+AGG 0.647813 1:-58079305 None:intergenic
TTGTTGCAGATACACACAAG+AGG 0.652660 1:-58079110 None:intergenic
GTTTGCAAAATTGTGCTGTG+TGG 0.653112 1:+58079667 MsaT003516.1:CDS
TGGAGACCAAGCTCATCTAG+TGG 0.665111 1:+58080641 MsaT003516.1:CDS
AGGATTCGGAAGTTTAAAAG+CGG 0.670736 1:+58081714 MsaT003516.1:CDS
GGAGCTGGAGATAATTAAGG+TGG 0.673703 1:+58080007 MsaT003516.1:CDS
ACCATAAGCTGAAAAGTGTG+AGG 0.673832 1:-58079375 None:intergenic
AATAGCCATCTCTGAACCCG+GGG 0.674767 1:+58081452 MsaT003516.1:CDS
TCATGAGTGATGGTATGAGG+AGG 0.683443 1:+58080183 MsaT003516.1:CDS
TGGTTGGTACCATATACTCA+CGG 0.687045 1:+58081375 MsaT003516.1:CDS
CAGACGCTGGAAGTCAAGGG+AGG 0.709276 1:+58080597 MsaT003516.1:CDS
TCTACTGGATTGTAACCATG+GGG 0.741326 1:+58080544 MsaT003516.1:CDS
TCAGTGTCCTCAGGTCCCGG+GGG 0.744374 1:+58080722 MsaT003516.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 58079069 58081893 58079069 ID=MsaG003516
Chr1 mRNA 58079069 58081893 58079069 ID=MsaT003516.1;Parent=MsaG003516
Chr1 exon 58079069 58080811 58079069 ID=MsaT003516.1.exon1;Parent=MsaT003516.1
Chr1 CDS 58079069 58080811 58079069 ID=cds.MsaT003516.1;Parent=MsaT003516.1
Chr1 exon 58081357 58081893 58081357 ID=MsaT003516.1.exon2;Parent=MsaT003516.1
Chr1 CDS 58081357 58081893 58081357 ID=cds.MsaT003516.1;Parent=MsaT003516.1
Gene Sequence

>MsaT003516.1

ATGGTAAAAGCAATAGTTTCTGTGCTGTTGATTGCCTCTATCCTCTTGTGTGTATCTGCAACAACAGATAATGAATTTCCTAGATGTAATTGTGATGATGAGAACAGTTTGTGGACTATTGAGAGTATTTTGGAGTGTCAAAGAGTTGGTGATTTCTTGATTGCTGTGGCCTACTTCTCAATCCCTCTTGAGTTGCTTTATTTCGTCAGTTGCTCGAACGTCCCTTTCAAATGGGTCCTTGTTCAGTTCATTGCTTTTATAGTACTATGTGGATTGACACATTTTCTGAATGGTTGGACTTATGGTCCTCACACTTTTCAGCTTATGGTGGCACTTACCATCTTTAAGATTCTCACTGCCTTGGTGTCTTGTGCAACTGCGATAACGCTTGTCACTTTGATTCCTTTGCTTCTCAAAGTGAAGGTCAGGGAATTCATGCTCAAGAAAAAGACATGGGATCTTGGACGGGAGGTTGGTCTTATTATGAAGCAAAAGGAGGCTGCAATGCATGTAAGAATGCTTACTCAAGAGATTCGGAAATCCCTCGATAGACATACTATTCTGTATACTACTTTGGTGGAGCTTTCGAAAACATTAGGTTTGCAAAATTGTGCTGTGTGGATGCCAAATGAAGAAAAGACAGTGATGAATCTCACTCATGAATTGAACGCAAGGAATTTAGATATTTCTATACCGATTACTGATCCAGATGTTGTAAAAATTAAGGGAAGCAATGGAGTGAATATACTTAGCTCTGAATCAGCGCTTGCTGTTTCCAGTCTTGGTGTTTCTAGTGACGCAGGACCGGTTGCTGCCATTCGAATGCCAATGTTACGTGTTTGTAATTTTAAAGGAGGAACACCTGAGCTAACTCAGGCTTGTTATGCCATATTGGTCTTGATTCTTCCGGCCGAAGAACCTAGATCTTGGAGCAATCAGGAGCTGGAGATAATTAAGGTGGTTGCTGATCAGGTTGCCGTGGCTCTATCGCATGCTGCAATTCTTGAAGAGTCTCAACTTATGAGAGAGAAGTTGGAAGAGCGCAATCGAGCTTTGCAACTGGCGAGAAGGAATGCTATGATGGCAAGCCAGGCAAGAAACTCATTTCAGAAAGTCATGAGTGATGGTATGAGGAGGCCTATGCACTCGATTTTGGGATTGCTTTCAATGATACAAGACGATAATTTAAAGAATGAACAGAAGCTTATTGTGGATGCAATGTTAAAGACGAGCAATGTCCTCTCAAACTTGATAAATGATGCCATGGACAGCTCTGCAAAGGATGATGGAAGATTTCCTTTGGAGATAAGGTCTTTTGGGTTACATTCCATGATAAAAGAAGCAGCGTGCCTTGCCAAATGCATGTGTGTTTATAAGGGCTTGGGTTTTGTGGTTGAGGTTGATAAGTCTTTACCAAACCATGTTATGGGTGATGAGAGGAGGGTTTTTCAGGTGATTTTGCATATGGTTGGGAATCTACTGGATTGTAACCATGGGGAAGGGGGGATCCTAGTATTTCGAGTTTCGGCAGACGCTGGAAGTCAAGGGAGGAATGAAAAAGGATGGGCAACCTGGAGACCAAGCTCATCTAGTGGTGATGTAAATATTAGATTTGAGATAGGGATCAACAGTAGTGATTCTGAAGTTGGCAGCTCAGTGTCCTCAGGTCCCGGGGGTAGGACATATACCAGTGATAGATATGAGGGCAGAATGAGCTTTAGTATTTGCAAGAGGATAGTCCAGTTGATGCAAGGAAACTTATGGTTGGTACCATATACTCACGGTATTCCTCAAAGCATGACACTTCTTCTTCGGTTTCAATTACGGCCTTCCATTGCAATAGCCATCTCTGAACCCGGGGAATCTTCAGAACGCAACTATTCCAATTCAATGTTGAGAGGTCTGCAAGTTCTGTTGGTTGACAACGACGATGTAAATAGAGCAGTGACACAAAAACTGCTTCAGAAACTAGGCTGTTCCGTGACTTCCGCTTCTACGGGATTTGAATGCCTTACTGTCATTGGACCTGTTGGATCTTCCATTCAAGTCATTCTTTTGGATCTCCAAATGCCTGATATAGATGGATTCGAAGTCGCCGCAAGGATTCGGAAGTTTAAAAGCGGAAATAGGCCTATAATTGTTGCCTTGACTGCAAGTGCAGAAGAAGATTTGTGGGAAAGATGTATGCAGATTGGTGTTAATGGAGTAATCCGAAAACCGGTTTTGATGCAAGGAATTGCTAGTGAACTCAAGAGAATTCTGATGCAAGGAAATATTTGA
Protein sequence

>MsaT003516.1

MVKAIVSVLLIASILLCVSATTDNEFPRCNCDDENSLWTIESILECQRVGDFLIAVAYFSIPLELLYFVSCSNVPFKWVLVQFIAFIVLCGLTHFLNGWTYGPHTFQLMVALTIFKILTALVSCATAITLVTLIPLLLKVKVREFMLKKKTWDLGREVGLIMKQKEAAMHVRMLTQEIRKSLDRHTILYTTLVELSKTLGLQNCAVWMPNEEKTVMNLTHELNARNLDISIPITDPDVVKIKGSNGVNILSSESALAVSSLGVSSDAGPVAAIRMPMLRVCNFKGGTPELTQACYAILVLILPAEEPRSWSNQELEIIKVVADQVAVALSHAAILEESQLMREKLEERNRALQLARRNAMMASQARNSFQKVMSDGMRRPMHSILGLLSMIQDDNLKNEQKLIVDAMLKTSNVLSNLINDAMDSSAKDDGRFPLEIRSFGLHSMIKEAACLAKCMCVYKGLGFVVEVDKSLPNHVMGDERRVFQVILHMVGNLLDCNHGEGGILVFRVSADAGSQGRNEKGWATWRPSSSSGDVNIRFEIGINSSDSEVGSSVSSGPGGRTYTSDRYEGRMSFSICKRIVQLMQGNLWLVPYTHGIPQSMTLLLRFQLRPSIAIAISEPGESSERNYSNSMLRGLQVLLVDNDDVNRAVTQKLLQKLGCSVTSASTGFECLTVIGPVGSSIQVILLDLQMPDIDGFEVAARIRKFKSGNRPIIVALTASAEEDLWERCMQIGVNGVIRKPVLMQGIASELKRILMQGNI*