AlfalfaGEDB | MsaG003581

M. sativa ssp. caerulea / MsaG003581

KEGG: K04454 K09260
GO: GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006996 GO:0007275 GO:0008150 GO:0009553 GO:0009657 GO:0009658 GO:0009791 GO:0009888 GO:0009889 GO:0009909 GO:0009911 GO:0009960 GO:0009987 GO:0010154 GO:0010468 GO:0010556 GO:0010817 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032879 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048229 GO:0048316 GO:0048518 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051049 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0065008 GO:0071840 GO:0080090 GO:0140110 GO:1903506 GO:2000012 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141
PFAM: PF00319.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG003581	XP_003590822.1	91.561	237	20	0	1	237	1	237	3.65e-150	427

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG003581	sp\|Q9FKK2\|AGL62_ARATH	47.895	190	90	4	5	190	3	187	4.76e-48	163

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG003581	tr\|G7I4T7\|G7I4T7_MEDTR	91.561	237	20	0	1	237	1	237	1.74e-150	427

TFs/TRs:

Gene ID	Type	Classification
MsaG003581	TF	MADS-M-type

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000004	MsaG003581	0.839940	2.166662e-57	8.442317e-55
MsaG005283	MsaG003581	0.831942	2.265509e-55	6.934992e-53
MsaG005540	MsaG003581	0.855245	1.388566e-61	9.050356e-59
MsaG006269	MsaG003581	0.802596	8.746604e-49	1.254341e-46
MsaG006314	MsaG003581	0.816097	1.143047e-51	2.271899e-49
MsaG007139	MsaG003581	0.802045	1.134160e-48	1.606068e-46
MsaG008051	MsaG003581	0.818171	3.928215e-52	8.235363e-50
MsaG008029	MsaG003581	0.810796	1.651896e-50	2.876243e-48
MsaG008056	MsaG003581	0.813240	4.874149e-51	9.014703e-49
MsaG008363	MsaG003581	0.820121	1.420127e-52	3.133519e-50
MsaG011526	MsaG003581	0.803959	4.581003e-49	6.779451e-47
MsaG045340	MsaG003581	0.802575	8.831502e-49	1.265922e-46
MsaG047119	MsaG003581	0.848729	9.650012e-60	5.008172e-57
MsaG003846	MsaG003581	0.803954	4.592167e-49	6.795168e-47
MsaG003581	MsaG000634	0.816059	1.165690e-51	2.314611e-49
MsaG003581	MsaG003540	0.822092	5.015987e-53	1.166099e-50
MsaG003581	MsaG010137	0.819707	1.764125e-52	3.849796e-50
MsaG003581	MsaG022828	0.811249	1.318822e-50	2.321942e-48
MsaG003581	MsaG032525	0.838220	6.014216e-57	2.220846e-54
MsaG003581	MsaG033360	0.837053	1.194841e-56	4.257089e-54
MsaG003581	MsaG031949	0.815015	1.985287e-51	3.839217e-49
MsaG003581	MsaG038782	0.802950	7.398319e-49	1.069599e-46
MsaG014075	MsaG003581	0.804491	3.553412e-49	5.323906e-47
MsaG015236	MsaG003581	0.800703	2.129801e-48	2.925747e-46
MsaG015496	MsaG003581	0.822200	4.737958e-53	1.104650e-50
MsaG017258	MsaG003581	0.828301	1.735583e-54	4.786367e-52
MsaG017357	MsaG003581	0.826313	5.169994e-54	1.348666e-51
MsaG017365	MsaG003581	0.836728	1.444582e-56	5.096423e-54
MsaG018498	MsaG003581	0.812634	6.606415e-51	1.203502e-48
MsaG023326	MsaG003581	0.819374	2.100095e-52	4.543327e-50
MsaG023756	MsaG003581	0.809964	2.492399e-50	4.252548e-48
MsaG027483	MsaG003581	0.802145	1.082133e-48	1.535868e-46
MsaG028028	MsaG003581	0.821090	8.530033e-53	1.930978e-50
MsaG028046	MsaG003581	0.819831	1.653302e-52	3.619815e-50
MsaG034047	MsaG003581	0.828861	1.273227e-54	3.566806e-52
MsaG035233	MsaG003581	0.841433	8.839601e-58	3.610244e-55
MsaG036109	MsaG003581	0.826721	4.138070e-54	1.091814e-51
MsaG040013	MsaG003581	0.847204	2.530234e-59	1.247517e-56
MsaG040428	MsaG003581	0.850750	2.646601e-60	1.471883e-57
MsaG040505	MsaG003581	0.832681	1.489096e-55	4.656879e-53
MsaG041334	MsaG003581	0.801404	1.533183e-48	2.139756e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG003581	MtrunA17_Chr1g0187361	91.561	237	20	0	1	237	1	237	3.36e-154	427
MsaG003581	MtrunA17_Chr1g0188671	86.667	225	30	0	1	225	39	263	5.85e-144	403
MsaG003581	MtrunA17_Chr5g0422941	70.042	237	71	0	1	237	1	237	1.00e-121	345
MsaG003581	MtrunA17_Chr2g0317451	68.644	236	74	0	1	236	1	236	1.48e-116	332
MsaG003581	MtrunA17_Chr2g0317481	68.644	236	74	0	1	236	1	236	4.62e-116	331
MsaG003581	MtrunA17_Chr8g0355091	66.667	237	79	0	1	237	1	237	4.97e-115	328
MsaG003581	MtrunA17_Chr1g0149391	68.776	237	74	0	1	237	1	237	4.11e-111	318
MsaG003581	MtrunA17_Chr1g0206721	69.863	219	66	0	1	219	1	219	1.07e-110	317
MsaG003581	MtrunA17_Chr2g0292791	69.198	237	73	0	1	237	1	237	1.71e-110	317
MsaG003581	MtrunA17_Chr5g0422421	68.889	225	70	0	1	225	1	225	1.37e-109	315
MsaG003581	MtrunA17_Chr5g0419601	67.556	225	73	0	1	225	1	225	7.25e-108	310
MsaG003581	MtrunA17_Chr1g0206701	65.778	225	77	0	1	225	1	225	9.85e-108	310
MsaG003581	MtrunA17_Chr3g0089141	64.681	235	65	3	1	225	1	227	4.23e-103	298
MsaG003581	MtrunA17_Chr1g0208561	64.681	235	65	3	1	225	1	227	6.48e-103	297
MsaG003581	MtrunA17_Chr2g0300441	61.603	237	90	1	1	237	1	236	1.87e-102	296
MsaG003581	MtrunA17_Chr3g0099421	68.376	234	74	0	1	234	26	259	2.42e-102	297
MsaG003581	MtrunA17_Chr1g0206691	63.182	220	81	0	18	237	1	220	3.40e-99	288
MsaG003581	MtrunA17_Chr2g0325971	62.979	235	69	3	1	225	1	227	8.85e-98	284
MsaG003581	MtrunA17_Chr1g0208581	61.261	222	76	2	1	220	1	214	3.56e-94	275
MsaG003581	MtrunA17_Chr3g0099411	63.927	219	60	2	1	219	1	200	9.17e-93	271
MsaG003581	MtrunA17_Chr1g0206991	68.681	182	57	0	1	182	1	182	1.75e-89	262
MsaG003581	MtrunA17_Chr7g0238991	57.848	223	92	2	16	237	27	248	1.28e-84	252
MsaG003581	MtrunA17_Chr2g0300421	68.657	134	42	0	1	134	1	134	3.57e-56	177
MsaG003581	MtrunA17_Chr3g0089151	67.188	128	42	0	1	128	1	128	1.38e-54	171
MsaG003581	MtrunA17_Chr3g0085241	51.852	162	78	0	3	164	35	196	6.22e-53	171
MsaG003581	MtrunA17_Chr3g0119901	51.282	156	76	0	9	164	9	164	1.48e-51	166
MsaG003581	MtrunA17_Chr3g0111931	71.845	103	29	0	21	123	2	104	1.60e-48	155
MsaG003581	MtrunA17_Chr2g0333981	37.278	169	96	2	5	170	8	169	1.88e-31	114
MsaG003581	MtrunA17_Chr8g0379021	38.037	163	91	2	5	164	8	163	3.31e-31	113
MsaG003581	MtrunA17_Chr1g0187351	84.127	63	10	0	18	80	1	63	1.74e-30	108
MsaG003581	MtrunA17_Chr3g0111841	86.441	59	8	0	15	73	2	60	5.04e-30	107
MsaG003581	MtrunA17_Chr4g0018951	39.161	143	75	3	22	164	25	155	1.66e-26	100
MsaG003581	MtrunA17_Chr4g0071601	37.430	179	92	5	5	170	8	179	1.00e-24	96.7
MsaG003581	MtrunA17_Chr3g0111831	66.176	68	23	0	16	83	11	78	1.49e-23	90.5
MsaG003581	MtrunA17_Chr1g0169761	56.338	71	31	0	9	79	2	72	9.23e-22	88.6
MsaG003581	MtrunA17_Chr4g0074101	41.803	122	52	3	9	111	2	123	1.56e-21	88.6
MsaG003581	MtrunA17_Chr8g0376821	54.930	71	32	0	9	79	2	72	7.03e-21	86.3
MsaG003581	MtrunA17_Chr1g0175601	50.000	78	39	0	9	86	2	79	8.65e-21	86.3
MsaG003581	MtrunA17_Chr8g0357771	41.228	114	62	1	9	122	2	110	1.03e-20	85.9
MsaG003581	MtrunA17_Chr1g0175611	49.367	79	40	0	9	87	2	80	4.82e-20	84.0
MsaG003581	MtrunA17_Chr1g0180591	43.810	105	57	2	9	111	2	106	7.95e-20	83.6
MsaG003581	MtrunA17_Chr8g0356071	49.383	81	40	1	9	89	2	81	4.56e-19	81.3
MsaG003581	MtrunA17_Chr4g0052081	53.623	69	32	0	9	77	2	70	6.39e-18	78.6
MsaG003581	MtrunA17_Chr4g0049901	57.576	66	28	0	10	75	29	94	1.26e-17	79.0
MsaG003581	MtrunA17_Chr4g0057151	46.914	81	40	1	10	87	3	83	1.27e-17	78.2
MsaG003581	MtrunA17_Chr8g0351041	46.053	76	41	0	10	85	3	78	1.50e-17	77.0
MsaG003581	MtrunA17_Chr3g0077501	50.000	68	34	0	9	76	2	69	4.42e-17	77.4
MsaG003581	MtrunA17_Chr4g0052061	39.048	105	62	1	9	113	2	104	4.54e-17	75.9
MsaG003581	MtrunA17_Chr8g0351031	46.053	76	41	0	10	85	3	78	7.27e-17	76.6
MsaG003581	MtrunA17_Chr3g0097101	47.297	74	39	0	3	76	11	84	7.38e-17	77.0
MsaG003581	MtrunA17_Chr8g0351051	50.000	68	34	0	9	76	2	69	3.02e-16	75.5
MsaG003581	MtrunA17_Chr1g0204111	51.471	68	33	0	9	76	18	85	4.45e-16	75.1
MsaG003581	MtrunA17_Chr6g0474371	49.275	69	34	1	9	76	2	70	5.45e-16	73.6
MsaG003581	MtrunA17_Chr1g0173161	51.562	64	31	0	9	72	2	65	6.86e-16	70.5
MsaG003581	MtrunA17_Chr7g0246381	53.030	66	26	1	9	69	2	67	9.37e-16	69.7
MsaG003581	MtrunA17_Chr2g0279821	46.479	71	38	0	9	79	2	72	1.31e-15	73.6
MsaG003581	MtrunA17_Chr8g0380021	50.000	68	34	0	9	76	18	85	1.37e-15	73.6
MsaG003581	MtrunA17_Chr4g0020221	31.293	147	70	2	9	124	2	148	1.63e-15	73.6
MsaG003581	MtrunA17_Chr2g0284911	30.811	185	86	3	9	164	17	188	1.92e-15	73.6
MsaG003581	MtrunA17_Chr2g0308251	46.575	73	39	0	9	81	2	74	1.96e-15	69.3
MsaG003581	MtrunA17_Chr7g0246431	32.258	155	72	4	10	131	3	157	2.26e-15	72.4
MsaG003581	MtrunA17_Chr5g0404951	40.179	112	59	4	9	114	2	111	3.15e-15	72.4
MsaG003581	MtrunA17_Chr4g0061691	46.377	69	36	1	9	76	2	70	4.33e-15	72.0
MsaG003581	MtrunA17_Chr8g0345001	30.814	172	92	6	2	159	9	167	5.43e-15	70.9
MsaG003581	MtrunA17_Chr5g0427401	44.118	68	38	0	9	76	2	69	5.44e-15	71.6
MsaG003581	MtrunA17_Chr6g0455511	47.826	69	35	1	9	76	2	70	5.97e-15	72.0
MsaG003581	MtrunA17_Chr5g0412271	47.143	70	36	1	9	77	2	71	7.71e-15	71.2
MsaG003581	MtrunA17_Chr5g0412461	47.143	70	36	1	9	77	2	71	8.24e-15	71.2
MsaG003581	MtrunA17_Chr4g0049541	45.588	68	37	0	9	76	2	69	1.27e-14	70.5
MsaG003581	MtrunA17_Chr5g0425191	53.030	66	31	0	8	73	1	66	1.73e-14	67.4
MsaG003581	MtrunA17_Chr7g0220111	46.377	69	36	1	9	76	2	70	1.88e-14	70.5
MsaG003581	MtrunA17_Chr1g0159661	48.485	66	33	1	9	74	2	66	2.20e-14	68.9
MsaG003581	MtrunA17_Chr3g0134451	41.905	105	58	3	9	112	2	104	2.44e-14	70.9
MsaG003581	MtrunA17_Chr5g0427921	47.368	57	30	0	9	65	2	58	3.52e-14	65.1
MsaG003581	MtrunA17_Chr8g0377561	53.571	56	26	0	9	64	2	57	3.58e-14	66.2
MsaG003581	MtrunA17_Chr4g0044071	56.140	57	25	0	9	65	2	58	3.76e-14	66.6
MsaG003581	MtrunA17_Chr5g0420091	53.571	56	26	0	9	64	2	57	4.76e-14	68.9
MsaG003581	MtrunA17_Chr8g0366231	52.632	57	27	0	9	65	2	58	4.89e-14	69.3
MsaG003581	MtrunA17_Chr4g0061671	50.877	57	28	0	9	65	2	58	5.06e-14	68.2
MsaG003581	MtrunA17_Chr5g0411691	44.118	68	38	0	9	76	2	69	5.38e-14	68.9
MsaG003581	MtrunA17_Chr5g0420081	51.786	56	27	0	9	64	2	57	5.99e-14	68.9
MsaG003581	MtrunA17_Chr3g0122251	55.357	56	25	0	9	64	2	57	6.70e-14	68.9
MsaG003581	MtrunA17_Chr3g0125241	48.485	66	33	1	9	74	27	91	8.64e-14	67.8
MsaG003581	MtrunA17_Chr7g0220121	41.667	72	41	1	9	79	2	73	1.06e-13	68.6
MsaG003581	MtrunA17_Chr3g0142191	47.619	63	33	0	9	71	2	64	1.83e-13	67.4
MsaG003581	MtrunA17_Chr1g0164791	55.357	56	25	0	9	64	2	57	4.59e-13	66.2
MsaG003581	MtrunA17_Chr1g0166611	36.449	107	55	2	20	126	17	110	8.05e-13	63.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG003581	AT5G60440.1	47.895	190	90	4	5	190	3	187	4.84e-49	163
MsaG003581	AT1G01530.1	42.632	190	101	3	4	192	2	184	7.02e-42	143
MsaG003581	AT4G36590.1	40.426	235	119	8	5	226	3	229	2.25e-38	134
MsaG003581	AT1G65360.1	38.793	232	113	9	5	223	3	218	9.39e-38	132
MsaG003581	AT2G24840.1	46.626	163	80	3	9	167	63	222	3.72e-37	131
MsaG003581	AT3G04100.1	29.545	176	108	3	2	167	7	176	5.18e-25	98.2
MsaG003581	AT1G72350.1	34.483	174	80	5	9	182	43	182	1.70e-22	92.0
MsaG003581	AT2G34440.1	41.441	111	64	1	9	119	2	111	1.53e-21	88.2
MsaG003581	AT3G66656.1	36.975	119	71	1	9	123	2	120	4.17e-19	82.0
MsaG003581	AT1G29962.1	28.000	175	120	3	5	173	4	178	1.02e-18	81.3
MsaG003581	AT5G51870.1	31.746	189	82	5	10	168	3	174	1.12e-17	79.0
MsaG003581	AT5G62165.17	35.664	143	63	4	10	123	3	145	1.60e-17	77.4
MsaG003581	AT5G62165.12	35.664	143	63	4	10	123	3	145	1.60e-17	77.4
MsaG003581	AT5G62165.11	35.664	143	63	4	10	123	3	145	1.60e-17	77.4
MsaG003581	AT4G22950.2	45.833	72	39	0	10	81	3	74	2.90e-17	77.0
MsaG003581	AT5G51870.4	36.111	144	62	3	10	123	3	146	3.59e-17	77.8
MsaG003581	AT5G51870.3	36.111	144	62	3	10	123	13	156	3.97e-17	77.8
MsaG003581	AT4G22950.3	33.537	164	99	4	10	169	3	160	4.32e-17	77.4
MsaG003581	AT4G22950.1	33.537	164	99	4	10	169	3	160	4.32e-17	77.4
MsaG003581	AT2G45650.1	51.471	68	33	0	9	76	2	69	4.94e-17	78.2
MsaG003581	AT2G45660.2	50.000	68	34	0	10	77	3	70	5.03e-17	75.9
MsaG003581	AT5G62165.3	34.965	143	64	3	10	123	3	145	5.83e-17	77.0
MsaG003581	AT5G62165.1	34.965	143	64	3	10	123	3	145	5.83e-17	77.0
MsaG003581	AT5G62165.2	34.965	143	64	3	10	123	3	145	5.83e-17	77.0
MsaG003581	AT5G62165.6	35.714	140	61	4	10	120	3	142	6.01e-17	75.5
MsaG003581	AT5G62165.9	35.714	140	61	4	10	120	3	142	6.01e-17	75.5
MsaG003581	AT5G62165.7	35.714	140	61	4	10	120	3	142	6.01e-17	75.5
MsaG003581	AT5G62165.8	35.714	140	61	4	10	120	3	142	6.01e-17	75.5
MsaG003581	AT5G62165.13	35.714	140	61	4	10	120	3	142	6.01e-17	75.5
MsaG003581	AT4G09960.2	42.857	98	51	2	9	101	2	99	6.63e-17	77.0
MsaG003581	AT5G10140.2	50.725	69	33	1	9	76	2	70	6.90e-17	75.9
MsaG003581	AT4G09960.6	42.857	98	51	2	9	101	3	100	7.27e-17	77.4
MsaG003581	AT4G09960.1	42.857	98	51	2	9	101	2	99	7.45e-17	77.0
MsaG003581	AT5G10140.4	50.725	69	33	1	9	76	2	70	8.91e-17	75.9
MsaG003581	AT5G10140.1	50.725	69	33	1	9	76	2	70	1.03e-16	76.3
MsaG003581	AT2G45660.1	50.000	68	34	0	10	77	3	70	1.05e-16	76.6
MsaG003581	AT4G09960.5	42.857	98	51	2	9	101	12	109	1.07e-16	77.0
MsaG003581	AT5G62165.10	33.750	160	72	4	10	135	3	162	1.15e-16	75.9
MsaG003581	AT5G62165.4	33.750	160	72	4	10	135	3	162	1.15e-16	75.9
MsaG003581	AT3G54340.1	42.342	111	57	4	9	114	2	110	1.19e-16	76.6
MsaG003581	AT5G62165.14	50.746	67	33	0	10	76	3	69	1.49e-16	73.2
MsaG003581	AT5G10140.3	50.725	69	33	1	9	76	2	70	1.67e-16	75.1
MsaG003581	AT4G09960.3	42.857	98	51	2	9	101	28	125	1.75e-16	76.6
MsaG003581	AT5G51870.5	34.932	146	65	3	5	120	21	166	1.84e-16	75.5
MsaG003581	AT5G51870.2	35.461	141	61	3	10	120	3	143	2.16e-16	74.7
MsaG003581	AT4G18960.1	42.857	105	55	2	2	101	11	115	2.66e-16	76.3
MsaG003581	AT4G09960.4	42.857	98	51	2	9	101	97	194	3.40e-16	76.6
MsaG003581	AT3G57230.2	45.588	68	37	0	9	76	2	69	3.76e-16	73.2
MsaG003581	AT1G28460.1	27.326	172	122	1	5	173	4	175	4.10e-16	74.3
MsaG003581	AT5G51860.1	31.053	190	90	4	10	169	3	181	4.65e-16	74.7
MsaG003581	AT5G51860.2	50.746	67	33	0	10	76	3	69	6.34e-16	73.9
MsaG003581	AT2G22540.3	48.529	68	35	0	9	76	2	69	9.29e-16	74.3
MsaG003581	AT2G22540.1	48.529	68	35	0	9	76	2	69	9.29e-16	74.3
MsaG003581	AT5G13790.2	51.471	68	33	0	9	76	2	69	1.26e-15	74.3
MsaG003581	AT5G13790.1	51.471	68	33	0	9	76	2	69	1.34e-15	74.3
MsaG003581	AT3G57230.1	45.588	68	37	0	9	76	2	69	1.76e-15	73.6
MsaG003581	AT3G57230.4	45.588	68	37	0	9	76	2	69	1.76e-15	73.6
MsaG003581	AT1G28450.1	27.429	175	121	3	5	173	4	178	2.10e-15	72.4
MsaG003581	AT4G37940.3	47.059	68	36	0	9	76	2	69	2.50e-15	72.0
MsaG003581	AT4G37940.1	47.059	68	36	0	9	76	2	69	2.59e-15	72.8
MsaG003581	AT4G37940.4	47.059	68	36	0	9	76	2	69	2.69e-15	72.8
MsaG003581	AT2G42830.1	43.421	76	43	0	1	76	9	84	2.92e-15	73.2
MsaG003581	AT2G42830.2	43.421	76	43	0	1	76	9	84	3.25e-15	73.2
MsaG003581	AT4G24540.1	48.529	68	35	0	9	76	2	69	3.75e-15	72.4
MsaG003581	AT3G57390.3	48.529	68	35	0	9	76	2	69	4.18e-15	72.4
MsaG003581	AT3G30260.1	31.507	146	70	5	9	124	2	147	4.55e-15	72.8
MsaG003581	AT3G58780.1	47.059	68	36	0	9	76	17	84	4.58e-15	72.8
MsaG003581	AT2G22630.1	47.059	68	36	0	9	76	2	69	4.67e-15	72.4
MsaG003581	AT2G22630.2	47.059	68	36	0	9	76	2	69	4.67e-15	72.4
MsaG003581	AT1G22130.1	40.404	99	58	1	9	106	2	100	5.14e-15	73.6
MsaG003581	AT3G58780.5	47.059	68	36	0	9	76	23	90	5.21e-15	72.4
MsaG003581	AT1G77980.1	44.318	88	48	1	9	95	2	89	5.34e-15	73.6
MsaG003581	AT5G23260.4	50.667	75	35	1	5	77	14	88	7.77e-15	72.4
MsaG003581	AT3G58780.4	44.000	75	42	0	2	76	10	84	8.61e-15	72.4
MsaG003581	AT5G23260.1	50.667	75	35	1	5	77	14	88	8.86e-15	72.0
MsaG003581	AT3G57390.1	48.529	68	35	0	9	76	2	69	8.90e-15	72.0
MsaG003581	AT5G60910.1	29.756	205	100	7	9	179	2	196	1.44e-14	71.2
MsaG003581	AT1G17310.1	51.899	79	36	1	8	86	47	123	1.46e-14	70.9
MsaG003581	AT5G20240.1	47.143	70	35	1	9	76	2	71	1.66e-14	70.5
MsaG003581	AT1G69120.2	31.973	147	84	3	9	155	2	132	1.72e-14	70.9
MsaG003581	AT5G65050.2	47.826	69	35	1	9	76	2	70	1.73e-14	69.7
MsaG003581	AT5G20240.2	47.143	70	35	1	9	76	2	71	1.75e-14	68.9
MsaG003581	AT3G58780.2	29.775	178	90	4	9	164	17	181	1.86e-14	70.9
MsaG003581	AT4G11880.2	57.143	56	24	0	10	65	3	58	1.92e-14	69.7
MsaG003581	AT4G11880.3	57.143	56	24	0	10	65	3	58	1.92e-14	69.7
MsaG003581	AT1G17310.2	51.899	79	36	1	8	86	58	134	1.95e-14	70.5
MsaG003581	AT5G65070.4	33.557	149	86	4	9	152	2	142	2.30e-14	68.6
MsaG003581	AT5G65050.5	33.582	134	64	5	9	124	2	128	2.40e-14	69.3
MsaG003581	AT5G65050.1	32.857	140	68	5	9	124	2	139	2.49e-14	69.3
MsaG003581	AT5G23260.2	52.113	71	32	1	9	77	2	72	2.52e-14	70.5
MsaG003581	AT5G65050.3	32.857	140	68	5	9	124	2	139	2.62e-14	69.7
MsaG003581	AT5G23260.3	52.113	71	32	1	9	77	2	72	2.83e-14	70.1
MsaG003581	AT2G22540.2	48.529	68	30	1	9	76	2	64	2.86e-14	70.1
MsaG003581	AT1G77950.3	46.479	71	37	1	9	78	2	72	2.86e-14	70.5
MsaG003581	AT1G77950.2	46.479	71	37	1	9	78	2	72	2.86e-14	70.5
MsaG003581	AT1G77950.1	46.479	71	37	1	9	78	2	72	2.86e-14	70.5
MsaG003581	AT1G77950.4	46.479	71	37	1	9	78	2	72	2.86e-14	70.5
MsaG003581	AT1G69120.1	31.973	147	84	3	9	155	2	132	2.92e-14	70.5
MsaG003581	AT4G11880.4	57.143	56	24	0	10	65	3	58	3.15e-14	69.7
MsaG003581	AT4G11880.1	57.143	56	24	0	10	65	3	58	3.15e-14	69.7
MsaG003581	AT3G61120.1	31.469	143	71	3	9	124	2	144	4.10e-14	70.1
MsaG003581	AT1G47760.1	37.864	103	50	2	9	111	2	90	4.17e-14	68.9
MsaG003581	AT2G03710.3	55.357	56	25	0	9	64	2	57	4.98e-14	68.6
MsaG003581	AT5G15800.1	46.377	69	36	1	9	76	2	70	5.58e-14	69.7
MsaG003581	AT1G26310.1	52.632	57	27	0	9	65	2	58	6.72e-14	69.3
MsaG003581	AT2G14210.1	44.928	69	37	1	9	76	2	70	8.32e-14	68.9
MsaG003581	AT5G65070.1	31.206	141	69	4	9	124	2	139	8.57e-14	68.2
MsaG003581	AT5G15800.2	46.377	69	36	1	9	76	2	70	8.97e-14	69.3
MsaG003581	AT2G14210.2	44.928	69	37	1	9	76	2	70	1.03e-13	68.6
MsaG003581	AT2G03710.2	55.357	56	25	0	9	64	2	57	1.26e-13	68.6
MsaG003581	AT2G03710.1	55.357	56	25	0	9	64	2	57	1.35e-13	68.6
MsaG003581	AT1G24260.3	53.571	56	26	0	9	64	2	57	1.41e-13	68.2
MsaG003581	AT1G24260.1	53.571	56	26	0	9	64	2	57	1.60e-13	68.2
MsaG003581	AT1G24260.2	53.571	56	26	0	9	64	2	57	1.63e-13	68.2
MsaG003581	AT3G02310.1	53.571	56	26	0	9	64	2	57	2.03e-13	68.2
MsaG003581	AT5G65060.2	44.928	69	37	1	9	76	2	70	2.08e-13	67.0
MsaG003581	AT3G58780.3	46.875	64	34	0	2	65	10	73	2.09e-13	68.2
MsaG003581	AT3G02310.2	53.571	56	26	0	9	64	2	57	2.24e-13	67.0
MsaG003581	AT5G65060.1	44.928	69	37	1	9	76	2	70	2.34e-13	67.0
MsaG003581	AT5G65060.3	44.928	69	37	1	9	76	2	70	2.80e-13	66.6
MsaG003581	AT5G65070.2	42.029	69	39	1	9	76	2	70	4.37e-13	67.0
MsaG003581	AT5G65070.5	46.667	60	32	0	9	68	2	61	5.00e-13	66.2
MsaG003581	AT5G65070.3	46.667	60	32	0	9	68	2	61	5.86e-13	66.6
MsaG003581	AT5G65080.2	28.966	145	82	2	1	124	1	145	7.46e-13	65.9
MsaG003581	AT5G27130.1	48.148	81	37	3	5	81	10	89	1.09e-12	66.6
MsaG003581	AT1G71692.1	44.286	70	38	1	9	77	2	71	2.08e-12	64.7
MsaG003581	AT5G65080.3	28.767	146	82	4	1	124	1	146	3.09e-12	63.9
MsaG003581	AT5G49490.1	29.461	241	105	11	5	215	41	246	9.73e-12	63.5
MsaG003581	AT1G46408.1	36.000	125	71	5	7	122	2	126	2.84e-11	62.4
MsaG003581	AT4G37435.1	48.214	56	29	0	9	64	2	57	6.19e-11	60.1

Find 54 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGCATTAAGCTCGCGCAATT+TGG	0.231826	1:-59192656	None:intergenic
ATTGAAGCTTCTTGATGATT+TGG	0.278070	1:-59192955	None:intergenic
ATTGCAAGATCCCATTGTTT+TGG	0.301551	1:-59192612	None:intergenic
TTGTTTGGTTTCAACAATAT+AGG	0.376703	1:+59193021	MsaT003581.1:CDS
AGCGAGCTTTGCACCCTTTG+TGG	0.378424	1:+59192484	MsaT003581.1:CDS
ATGTTGCAACCTCATTTGTT+TGG	0.384083	1:+59193006	MsaT003581.1:CDS
GACCTTATCCATCCCTTCAA+TGG	0.393032	1:-59192782	None:intergenic
TGTTGGTATGGTTGTAAGTC+AGG	0.400193	1:+59192861	MsaT003581.1:CDS
GTGGGACCTGAGAGAGATAA+TGG	0.405328	1:-59192588	None:intergenic
TGGCTACCCAGATGTTTATA+CGG	0.408391	1:+59192558	MsaT003581.1:CDS
TGGTGGGCTTGTCCCATTGA+AGG	0.408921	1:+59192769	MsaT003581.1:CDS
TCTATGACCGTATAAACATC+TGG	0.410748	1:-59192565	None:intergenic
AGAAGAATGAGGCTCAGTTT+TGG	0.412014	1:+59192749	MsaT003581.1:CDS
GATGGTGGACATGGTCCCTC+TGG	0.456482	1:+59193048	MsaT003581.1:CDS
AAGCTTCTTGATGATTTGGC+TGG	0.457989	1:-59192951	None:intergenic
ACCTTATCCATCCCTTCAAT+GGG	0.468641	1:-59192781	None:intergenic
CATAGACCATTATCTCTCTC+AGG	0.493066	1:+59192582	MsaT003581.1:CDS
AACAAATGAGGTTGCAACAT+AGG	0.496587	1:-59193003	None:intergenic
TGTATTCTCACCTAGTGATA+AGG	0.498147	1:+59192525	MsaT003581.1:CDS
TCCCATTGAAGGGATGGATA+AGG	0.507796	1:+59192780	MsaT003581.1:CDS
AGCAATATATGCACCACAAA+GGG	0.513172	1:-59192497	None:intergenic
AGGTCCCACTCCAAAACAAT+GGG	0.517473	1:+59192602	MsaT003581.1:CDS
ACAAATGAGGTTGCAACATA+GGG	0.527904	1:-59193002	None:intergenic
GGCTTGTCCCATTGAAGGGA+TGG	0.531760	1:+59192774	MsaT003581.1:CDS
TTTGGTTTCAACAATATAGG+AGG	0.541850	1:+59193024	MsaT003581.1:CDS
GGTGGGCTTGTCCCATTGAA+GGG	0.542115	1:+59192770	MsaT003581.1:CDS
TTCAACAATATAGGAGGAGA+TGG	0.553417	1:+59193030	MsaT003581.1:CDS
TTGTTGAAACCAAACAAATG+AGG	0.558095	1:-59193015	None:intergenic
CAGGTCCCACTCCAAAACAA+TGG	0.563813	1:+59192601	MsaT003581.1:CDS
TGATTTGGCTGGTGCTCGAT+AGG	0.567200	1:-59192940	None:intergenic
ACTTTCTCGAAGCGTCGTAG+TGG	0.570157	1:+59192445	MsaT003581.1:CDS
ATCATGTCGAGTGGAAAGAA+AGG	0.570415	1:+59192364	None:intergenic
TGGGATCTTGCAATTCATTG+AGG	0.581064	1:+59192621	MsaT003581.1:CDS
ACTCAAATCAACGATGCACT+AGG	0.586796	1:+59192685	MsaT003581.1:CDS
CGATTTATGCAAGAAGAATG+AGG	0.588461	1:+59192738	MsaT003581.1:CDS
ATAGGGTTCTGACAAAATCC+AGG	0.592191	1:-59192985	None:intergenic
GTGCTCGATAGGCATGGTAG+AGG	0.592462	1:-59192929	None:intergenic
CTATGACCGTATAAACATCT+GGG	0.594194	1:-59192564	None:intergenic
TGTGCTTCAATCATGTCGAG+TGG	0.596376	1:+59192355	None:intergenic
AAACGAATTGCAGAACATGT+TGG	0.599135	1:+59192844	MsaT003581.1:CDS
AATTGCAGAACATGTTGGTA+TGG	0.601458	1:+59192849	MsaT003581.1:CDS
GTTGGTATGGTTGTAAGTCA+GGG	0.608714	1:+59192862	MsaT003581.1:CDS
GCTCGCGCAATTTGGCGCTG+CGG	0.612951	1:-59192648	None:intergenic
ATAGGAGGAGATGGTGGACA+TGG	0.613263	1:+59193039	MsaT003581.1:CDS
GGTTCTGACAAAATCCAGGC+GGG	0.613799	1:-59192981	None:intergenic
AACAATATAGGAGGAGATGG+TGG	0.621356	1:+59193033	MsaT003581.1:CDS
AATGAAAACACCTTATCACT+AGG	0.625532	1:-59192535	None:intergenic
TGGCTGGTGCTCGATAGGCA+TGG	0.627452	1:-59192935	None:intergenic
TCGAGTGGAAAGAAAGGTCA+AGG	0.628900	1:+59192370	MsaT003581.1:CDS
GAGCAATATATGCACCACAA+AGG	0.643897	1:-59192498	None:intergenic
TTGGTATGGTTGTAAGTCAG+GGG	0.657692	1:+59192863	MsaT003581.1:CDS
TTGGATCAATAGAATCCAGA+GGG	0.672575	1:-59193063	None:intergenic
CTTGGATCAATAGAATCCAG+AGG	0.702259	1:-59193064	None:intergenic
GGGTTCTGACAAAATCCAGG+CGG	0.715161	1:-59192982	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	59192367	59193080	59192367	ID=MsaG003581
Chr1	mRNA	59192367	59193080	59192367	ID=MsaT003581.1;Parent=MsaG003581
Chr1	exon	59192367	59193080	59192367	ID=MsaT003581.1.exon1;Parent=MsaT003581.1
Chr1	CDS	59192367	59193080	59192367	ID=cds.MsaT003581.1;Parent=MsaT003581.1

Gene Sequence

>MsaT003581.1

ATGTCGAGTGGAAAGAAAGGTCAAGGTCGCAAAAAAATTGAGATGAAAAAAATGAGCAATGAGAGCAATTTGCAAGTGACTTTCTCGAAGCGTCGTAGTGGACTCTTCAAGAAAGCGAGCGAGCTTTGCACCCTTTGTGGTGCATATATTGCTCTCATTGTATTCTCACCTAGTGATAAGGTGTTTTCATTTGGCTACCCAGATGTTTATACGGTCATAGACCATTATCTCTCTCAGGTCCCACTCCAAAACAATGGGATCTTGCAATTCATTGAGGCTCACCGCAGCGCCAAATTGCGCGAGCTTAATGCTATGTTAACTCAAATCAACGATGCACTAGGCATCGAAAAGAAGCGCAAGAATGAGCTGATCGATTTATGCAAGAAGAATGAGGCTCAGTTTTGGTGGGCTTGTCCCATTGAAGGGATGGATAAGGTCCAACTTCAATTATTGAAAAATGCTTTGTTGGATCTTAAGAAACGAATTGCAGAACATGTTGGTATGGTTGTAAGTCAGGGGACTCCTACCCAAACCCTTCCGTTTTTTGTTGGCAATGGTTCGTCCTCTACCATGCCTATCGAGCACCAGCCAAATCATCAAGAAGCTTCAATTTTCCCGCCTGGATTTTGTCAGAACCCTATGTTGCAACCTCATTTGTTTGGTTTCAACAATATAGGAGGAGATGGTGGACATGGTCCCTCTGGATTCTATTGA

Protein sequence

>MsaT003581.1

MSSGKKGQGRKKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGAYIALIVFSPSDKVFSFGYPDVYTVIDHYLSQVPLQNNGILQFIEAHRSAKLRELNAMLTQINDALGIEKKRKNELIDLCKKNEAQFWWACPIEGMDKVQLQLLKNALLDLKKRIAEHVGMVVSQGTPTQTLPFFVGNGSSSTMPIEHQPNHQEASIFPPGFCQNPMLQPHLFGFNNIGGDGGHGPSGFY*