Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG003609 | XP_003590850.2 | 84.227 | 653 | 50 | 1 | 1 | 600 | 1 | 653 | 0.0 | 1055 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG003609 | sp|Q9LUZ4|C3H66_ARATH | 49.331 | 598 | 249 | 15 | 27 | 591 | 8 | 584 | 0.0 | 530 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG003609 | tr|G7I4W5|G7I4W5_MEDTR | 84.227 | 653 | 50 | 1 | 1 | 600 | 1 | 653 | 0.0 | 1055 |
Gene ID | Type | Classification |
---|---|---|
MsaG003609 | TF | C3H |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG003609 | MtrunA17_Chr1g0187591 | 84.227 | 653 | 50 | 1 | 1 | 600 | 1 | 653 | 0.0 | 1055 |
MsaG003609 | MtrunA17_Chr3g0105131 | 68.007 | 572 | 117 | 6 | 1 | 572 | 1 | 506 | 0.0 | 715 |
MsaG003609 | MtrunA17_Chr5g0430211 | 54.106 | 682 | 215 | 16 | 1 | 599 | 1 | 667 | 0.0 | 642 |
MsaG003609 | MtrunA17_Chr3g0105101 | 71.991 | 432 | 62 | 5 | 37 | 468 | 29 | 401 | 0.0 | 600 |
MsaG003609 | MtrunA17_Chr5g0437251 | 46.142 | 661 | 241 | 15 | 19 | 594 | 13 | 643 | 0.0 | 533 |
MsaG003609 | MtrunA17_Chr7g0257831 | 41.379 | 667 | 259 | 19 | 30 | 594 | 44 | 680 | 8.25e-149 | 446 |
MsaG003609 | MtrunA17_Chr3g0113651 | 43.151 | 584 | 203 | 17 | 31 | 591 | 8 | 485 | 5.17e-139 | 414 |
MsaG003609 | MtrunA17_Chr3g0088521 | 39.642 | 671 | 276 | 21 | 30 | 596 | 42 | 687 | 3.75e-137 | 416 |
MsaG003609 | MtrunA17_Chr3g0105121 | 53.083 | 373 | 142 | 5 | 228 | 590 | 8 | 357 | 4.03e-118 | 355 |
MsaG003609 | MtrunA17_Chr1g0171151 | 40.121 | 496 | 233 | 13 | 32 | 472 | 30 | 516 | 1.92e-104 | 328 |
MsaG003609 | MtrunA17_Chr3g0092171 | 46.260 | 361 | 169 | 6 | 30 | 380 | 80 | 425 | 4.41e-94 | 298 |
MsaG003609 | MtrunA17_Chr3g0105151 | 58.850 | 226 | 78 | 7 | 389 | 599 | 1 | 226 | 1.69e-69 | 224 |
MsaG003609 | MtrunA17_Chr3g0105141 | 66.434 | 143 | 47 | 1 | 194 | 335 | 1 | 143 | 1.40e-68 | 219 |
MsaG003609 | MtrunA17_Chr3g0092221 | 56.216 | 185 | 73 | 2 | 206 | 384 | 137 | 319 | 2.28e-67 | 224 |
MsaG003609 | MtrunA17_Chr8g0389561 | 54.268 | 164 | 69 | 1 | 225 | 382 | 77 | 240 | 3.09e-55 | 191 |
MsaG003609 | MtrunA17_Chr6g0487481 | 71.028 | 107 | 31 | 0 | 225 | 331 | 99 | 205 | 2.11e-54 | 189 |
MsaG003609 | MtrunA17_Chr3g0135351 | 60.448 | 134 | 51 | 2 | 219 | 350 | 43 | 176 | 9.72e-52 | 179 |
MsaG003609 | MtrunA17_Chr2g0324781 | 62.162 | 111 | 42 | 0 | 229 | 339 | 77 | 187 | 2.88e-49 | 176 |
MsaG003609 | MtrunA17_Chr4g0040391 | 58.879 | 107 | 44 | 0 | 225 | 331 | 56 | 162 | 1.73e-46 | 166 |
MsaG003609 | MtrunA17_Chr3g0105111 | 70.213 | 94 | 15 | 1 | 507 | 600 | 1 | 81 | 1.08e-36 | 132 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG003609 | AT5G58620.1 | 49.331 | 598 | 249 | 15 | 27 | 591 | 8 | 584 | 0.0 | 530 |
MsaG003609 | AT2G40140.2 | 46.535 | 606 | 258 | 17 | 1 | 591 | 1 | 555 | 1.97e-169 | 495 |
MsaG003609 | AT2G40140.1 | 46.535 | 606 | 258 | 17 | 1 | 591 | 1 | 555 | 1.97e-169 | 495 |
MsaG003609 | AT3G55980.1 | 46.281 | 605 | 253 | 14 | 1 | 591 | 1 | 547 | 6.78e-169 | 493 |
MsaG003609 | AT3G55980.2 | 46.281 | 605 | 253 | 14 | 1 | 591 | 68 | 614 | 6.27e-168 | 493 |
MsaG003609 | AT5G12850.1 | 42.602 | 615 | 260 | 20 | 25 | 556 | 34 | 638 | 1.64e-138 | 419 |
MsaG003609 | AT2G41900.1 | 47.669 | 472 | 184 | 11 | 25 | 453 | 40 | 491 | 5.85e-136 | 413 |
MsaG003609 | AT4G29190.1 | 42.979 | 235 | 99 | 6 | 218 | 441 | 68 | 278 | 2.08e-55 | 192 |
MsaG003609 | AT5G07500.1 | 61.983 | 121 | 46 | 0 | 211 | 331 | 34 | 154 | 1.29e-53 | 183 |
MsaG003609 | AT2G19810.1 | 55.195 | 154 | 52 | 3 | 214 | 365 | 61 | 199 | 3.90e-53 | 186 |
MsaG003609 | AT2G25900.2 | 58.915 | 129 | 53 | 0 | 225 | 353 | 86 | 214 | 1.06e-52 | 183 |
MsaG003609 | AT2G25900.1 | 58.915 | 129 | 53 | 0 | 225 | 353 | 86 | 214 | 1.06e-52 | 183 |
MsaG003609 | AT1G03790.1 | 49.718 | 177 | 75 | 5 | 196 | 368 | 53 | 219 | 6.15e-49 | 175 |
MsaG003609 | AT5G44260.1 | 61.818 | 110 | 41 | 1 | 225 | 333 | 56 | 165 | 4.26e-46 | 167 |
Find 144 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTCTTCATTGTGCTGTTTC+TGG | 0.137009 | 1:+59481906 | MsaT003609.1:CDS |
TGCTGCTTTGTTTGGAAGTA+TGG | 0.164133 | 1:+59481812 | MsaT003609.1:CDS |
CTTGTCAAACTGGTTTGATT+AGG | 0.230886 | 1:+59481592 | MsaT003609.1:CDS |
TGCATGATCCCTTCCGAAAC+TGG | 0.233906 | 1:-59482394 | None:intergenic |
ATGAGGAAATCTTATTCTTT+TGG | 0.245363 | 1:+59483211 | MsaT003609.1:CDS |
AAACTTGAAAATCGCCTTAC+AGG | 0.290393 | 1:+59482836 | MsaT003609.1:CDS |
GGTGTGTTGTCTTATATTCT+TGG | 0.293124 | 1:+59481834 | MsaT003609.1:CDS |
TTGTCAAACTGGTTTGATTA+GGG | 0.297404 | 1:+59481593 | MsaT003609.1:CDS |
ACGTTCTGCCTTCTCTGGTT+GGG | 0.305180 | 1:+59483135 | MsaT003609.1:CDS |
GTGAATTAACCCAAGATTCA+TGG | 0.305430 | 1:-59483306 | None:intergenic |
TATATAGTACAGATGAATTT+AGG | 0.309340 | 1:+59482237 | MsaT003609.1:CDS |
CTTGTTGCTGCTCCACCATT+TGG | 0.314456 | 1:-59482142 | None:intergenic |
GGCGATTTCCTTAAGGAAAT+AGG | 0.320571 | 1:+59482116 | MsaT003609.1:CDS |
CTTATGGTTGCTGCTTTGTT+TGG | 0.322501 | 1:+59481804 | MsaT003609.1:CDS |
CCGCTGATGCAAACGGTAAC+AGG | 0.343330 | 1:+59481991 | MsaT003609.1:CDS |
GAGTGCCCCTTTGTTCATCC+TGG | 0.343455 | 1:+59482314 | MsaT003609.1:CDS |
GAACACAAACCAGCAACTTC+AGG | 0.344769 | 1:+59482961 | MsaT003609.1:CDS |
AATAGAAAACCTTGTCAAAC+TGG | 0.348122 | 1:+59481582 | MsaT003609.1:CDS |
TTTGGAAACCTATTTCCTTA+AGG | 0.356811 | 1:-59482124 | None:intergenic |
GAACGCCATTACATCATCTT+TGG | 0.357587 | 1:-59481679 | None:intergenic |
CAAGGGCTTATTCTCATGAT+TGG | 0.357705 | 1:+59482288 | MsaT003609.1:CDS |
TCTCCTTCAAATAGGCTTGC+AGG | 0.358629 | 1:+59482866 | MsaT003609.1:CDS |
AAGGATTTCCCTGAAGTTGC+TGG | 0.361234 | 1:-59482970 | None:intergenic |
TGATCCAATCACATTTGAAT+TGG | 0.383285 | 1:-59483002 | None:intergenic |
GAAGGTTGGATCACATGAAA+TGG | 0.385080 | 1:+59481761 | MsaT003609.1:CDS |
TTCACCAAGTGCTTCTTCAA+TGG | 0.385276 | 1:+59482613 | MsaT003609.1:CDS |
TGACGACGGCGATTTCCTTA+AGG | 0.394169 | 1:+59482109 | MsaT003609.1:CDS |
TTTGAATTGGTCAGATCAAA+AGG | 0.399156 | 1:-59482989 | None:intergenic |
TGAAGAGAGGACACCTCTTA+TGG | 0.399251 | 1:+59481788 | MsaT003609.1:CDS |
AACGTTCTGCCTTCTCTGGT+TGG | 0.399281 | 1:+59483134 | MsaT003609.1:CDS |
GTCTTGCATCTCCTTCAAAT+AGG | 0.399881 | 1:+59482858 | MsaT003609.1:CDS |
TGTTGATCAAGTTCCATTGT+TGG | 0.405712 | 1:-59483343 | None:intergenic |
ATGGAACGTTCTGCCTTCTC+TGG | 0.406240 | 1:+59483130 | MsaT003609.1:CDS |
TTGTCTTATATTCTTGGAAC+CGG | 0.410886 | 1:+59481840 | MsaT003609.1:CDS |
TTAAAGCTCGCAACGCTGTT+GGG | 0.412730 | 1:-59483076 | None:intergenic |
CTAAGAGTATCTTCGGTTCA+AGG | 0.415813 | 1:+59482039 | MsaT003609.1:CDS |
TCAAAGTGAAGCCTTGTTCA+AGG | 0.431149 | 1:+59482270 | MsaT003609.1:CDS |
TCTGGTTGGGGCTCTCCTGA+TGG | 0.432980 | 1:+59483148 | MsaT003609.1:CDS |
AATGGGATAACCTTTCTTCT+CGG | 0.434409 | 1:-59482183 | None:intergenic |
CGTTCTGCCTTCTCTGGTTG+GGG | 0.438457 | 1:+59483136 | MsaT003609.1:CDS |
TATATTCCATTCTTTATGTC+AGG | 0.439563 | 1:-59482218 | None:intergenic |
CTGACCAATTCAAATGTGAT+TGG | 0.439991 | 1:+59482998 | MsaT003609.1:CDS |
GTCAGGTAGGGATGGATCAA+TGG | 0.440308 | 1:-59482201 | None:intergenic |
AGTGCCCCTTTGTTCATCCT+GGG | 0.442388 | 1:+59482315 | MsaT003609.1:CDS |
AACAAAGCAGCAACCATAAG+AGG | 0.442942 | 1:-59481801 | None:intergenic |
TGTTGGGCTCAATAAAGCTT+TGG | 0.447512 | 1:-59483060 | None:intergenic |
ACCGAGCGTGCGGCTCAGAT+AGG | 0.449079 | 1:+59481877 | MsaT003609.1:CDS |
ATTAAAGCTCGCAACGCTGT+TGG | 0.450312 | 1:-59483077 | None:intergenic |
GCTGCTTTGTTTGGAAGTAT+GGG | 0.450481 | 1:+59481813 | MsaT003609.1:CDS |
TTCTGCTAGCTCAGTTGCCA+TGG | 0.451503 | 1:+59483111 | MsaT003609.1:CDS |
TCGGTTTCTAAGAGTATCTT+CGG | 0.453417 | 1:+59482032 | MsaT003609.1:CDS |
GGAAGGGATCATGCAACAAA+GGG | 0.458959 | 1:+59482402 | MsaT003609.1:CDS |
TAACCTTTCTTCTCGGTTCG+AGG | 0.460096 | 1:-59482176 | None:intergenic |
TTATGGTATGGAAGGAAGGT+TGG | 0.462581 | 1:+59481747 | MsaT003609.1:CDS |
ACTCCTGCAAGCCTATTTGA+AGG | 0.467873 | 1:-59482869 | None:intergenic |
TACAACGGTCGAAGCTCCTC+TGG | 0.468452 | 1:-59482545 | None:intergenic |
AGGTGAAGGTAGAGCAGAAC+CGG | 0.476212 | 1:-59482576 | None:intergenic |
CCCTATCTGAGCCGCACGCT+CGG | 0.476697 | 1:-59481878 | None:intergenic |
GCATGATCCCTTCCGAAACT+GGG | 0.477065 | 1:-59482393 | None:intergenic |
ATGTTGATGAAGTAGGGTTA+TGG | 0.478320 | 1:+59481730 | MsaT003609.1:CDS |
TCCATTCTTTATGTCAGGTA+GGG | 0.481887 | 1:-59482213 | None:intergenic |
TTCTTTATGTCAGGTAGGGA+TGG | 0.483088 | 1:-59482209 | None:intergenic |
CGACCGTTGTATGCTTCTAC+CGG | 0.490079 | 1:+59482557 | MsaT003609.1:CDS |
GTTAATTCACTTGTGGAGGA+TGG | 0.491595 | 1:+59483319 | MsaT003609.1:CDS |
CTTCTCGGCATCTGAAGGGT+AGG | 0.494265 | 1:-59482767 | None:intergenic |
AAGGTTGGATCACATGAAAT+GGG | 0.495696 | 1:+59481762 | MsaT003609.1:CDS |
ATCTGCTTCTCGGCATCTGA+AGG | 0.497474 | 1:-59482772 | None:intergenic |
AGCCTTGTTCTGTATTGAGC+AGG | 0.498591 | 1:-59482470 | None:intergenic |
AGGGTTATGGTATGGAAGGA+AGG | 0.505824 | 1:+59481743 | MsaT003609.1:CDS |
TTCAGCCAAAGATGATGTAA+TGG | 0.508817 | 1:+59481674 | MsaT003609.1:CDS |
AACACAAACCAGCAACTTCA+GGG | 0.510224 | 1:+59482962 | MsaT003609.1:CDS |
TCCCTACCTGACATAAAGAA+TGG | 0.512480 | 1:+59482212 | MsaT003609.1:CDS |
ATACTGAAAGGCTTACTAGA+AGG | 0.514794 | 1:+59482068 | MsaT003609.1:CDS |
TAAGGAAATAGGTTTCCAAA+TGG | 0.517234 | 1:+59482127 | MsaT003609.1:CDS |
CAAAGTGAAGCCTTGTTCAA+GGG | 0.517860 | 1:+59482271 | MsaT003609.1:CDS |
TCAGGTAGGGATGGATCAAT+GGG | 0.518358 | 1:-59482200 | None:intergenic |
GCTTTGGCTCCGCTTCGAAA+AGG | 0.520561 | 1:-59483044 | None:intergenic |
GATCACGATGTTGATGAAGT+AGG | 0.520578 | 1:+59481723 | MsaT003609.1:CDS |
AAGTAGGGTTATGGTATGGA+AGG | 0.522426 | 1:+59481739 | MsaT003609.1:CDS |
TTGGGTTAATTCACTTGTGG+AGG | 0.524783 | 1:+59483315 | MsaT003609.1:CDS |
ATCACGATGTTGATGAAGTA+GGG | 0.526520 | 1:+59481724 | MsaT003609.1:CDS |
GGTGAATTTGAATATGATGT+AGG | 0.526620 | 1:-59482596 | None:intergenic |
CCTGTTACCGTTTGCATCAG+CGG | 0.528422 | 1:-59481991 | None:intergenic |
ATTAAGTTGATTGCCGCGGA+TGG | 0.528535 | 1:-59483185 | None:intergenic |
GTATCTTCGGTTCAAGGAAG+AGG | 0.528667 | 1:+59482045 | MsaT003609.1:CDS |
GAGCTAGCAGAAGGAAGCTC+GGG | 0.529540 | 1:-59483100 | None:intergenic |
GGAAATAGGTTTCCAAATGG+TGG | 0.533831 | 1:+59482130 | MsaT003609.1:CDS |
GCAATCAACTTAATAAAATG+AGG | 0.536307 | 1:+59483194 | MsaT003609.1:CDS |
TGAGCTAGCAGAAGGAAGCT+CGG | 0.538209 | 1:-59483101 | None:intergenic |
AAGGAGATGCAAGACCTGTA+AGG | 0.541933 | 1:-59482850 | None:intergenic |
GTGCAGCAACTTGATTGTCT+CGG | 0.545293 | 1:+59482013 | MsaT003609.1:CDS |
TGATGCACTTGTCTTGATGT+CGG | 0.546326 | 1:-59482938 | None:intergenic |
AGGAGAGCCCCAACCAGAGA+AGG | 0.547335 | 1:-59483143 | None:intergenic |
CCGAGCGTGCGGCTCAGATA+GGG | 0.547437 | 1:+59481878 | MsaT003609.1:CDS |
ATCTTGGGTTAATTCACTTG+TGG | 0.547777 | 1:+59483312 | MsaT003609.1:CDS |
CTCCTGATGGAAAATTAGAC+TGG | 0.548612 | 1:+59483161 | MsaT003609.1:CDS |
CGGAAGGGATCATGCAACAA+AGG | 0.550435 | 1:+59482401 | MsaT003609.1:CDS |
TTCTCGGCATCTGAAGGGTA+GGG | 0.550744 | 1:-59482766 | None:intergenic |
AATGATATTTCCTCGGATCA+CGG | 0.552863 | 1:-59482352 | None:intergenic |
ATCTGCAGCATCATCACCTA+CGG | 0.557496 | 1:+59482700 | MsaT003609.1:CDS |
GTTAGTTCCGCTGATGCAAA+CGG | 0.558347 | 1:+59481984 | MsaT003609.1:CDS |
CAGAAGTAGCACTTCAACAA+TGG | 0.559092 | 1:+59483243 | MsaT003609.1:CDS |
ATGAAACTGAATGCTCGAGA+AGG | 0.559556 | 1:+59482501 | MsaT003609.1:CDS |
TTCATCCTGGGGAAAACGCA+AGG | 0.560169 | 1:+59482327 | MsaT003609.1:CDS |
TCGGTTAACATCAACGCGAC+CGG | 0.566776 | 1:-59481859 | None:intergenic |
TTGTTCTGCTGCTTCTGCAG+AGG | 0.573601 | 1:+59481929 | MsaT003609.1:CDS |
CATGTGTAATGATATTTCCT+CGG | 0.575514 | 1:-59482359 | None:intergenic |
TTCCATTCTTTATGTCAGGT+AGG | 0.576271 | 1:-59482214 | None:intergenic |
AGAGAAGGCAGAACGTTCCA+TGG | 0.578816 | 1:-59483128 | None:intergenic |
GTGCCCCTTTGTTCATCCTG+GGG | 0.580017 | 1:+59482316 | MsaT003609.1:CDS |
ACACCTCGAACCGAGAAGAA+AGG | 0.587165 | 1:+59482173 | MsaT003609.1:CDS |
ACGCAAGGCGCCGTGATCCG+AGG | 0.588507 | 1:+59482342 | MsaT003609.1:CDS |
CTAATCAAACCAGTTTGACA+AGG | 0.588552 | 1:-59481591 | None:intergenic |
TGCCACATGGTTTCAGCCGT+AGG | 0.589886 | 1:-59482716 | None:intergenic |
TGAAACTGAATGCTCGAGAA+GGG | 0.591659 | 1:+59482502 | MsaT003609.1:CDS |
ATACAGAACAAGGCTTTGCA+AGG | 0.598747 | 1:+59482478 | MsaT003609.1:CDS |
GATGAAGTAGGGTTATGGTA+TGG | 0.604921 | 1:+59481735 | MsaT003609.1:CDS |
GAATCCATTGAAGAAGCACT+TGG | 0.606204 | 1:-59482617 | None:intergenic |
TCTGCTTCTCGGCATCTGAA+GGG | 0.621299 | 1:-59482771 | None:intergenic |
ATGGCAACTGAGCTAGCAGA+AGG | 0.621567 | 1:-59483109 | None:intergenic |
TGTGGAGGATGGTCCAACAA+TGG | 0.623254 | 1:+59483330 | MsaT003609.1:CDS |
CATGATCCCTTCCGAAACTG+GGG | 0.624608 | 1:-59482392 | None:intergenic |
GTAGGTGATGATGCTGCAGA+TGG | 0.625114 | 1:-59482698 | None:intergenic |
TGAGAATAAGCCCTTGAACA+AGG | 0.627841 | 1:-59482281 | None:intergenic |
AAAACAAAAGTCATGTGCAA+CGG | 0.630659 | 1:+59481555 | None:intergenic |
TGGAGCAGCAACAAGACGTA+GGG | 0.631886 | 1:+59482150 | MsaT003609.1:CDS |
GCAGATTGTATCAAAGAAGT+CGG | 0.632843 | 1:-59482656 | None:intergenic |
ATCCTGCTCAATACAGAACA+AGG | 0.635511 | 1:+59482468 | MsaT003609.1:CDS |
GCTGCAGATGGAGTCAAAAG+TGG | 0.640975 | 1:-59482686 | None:intergenic |
ATGAAATGGGATATGAAGAG+AGG | 0.647449 | 1:+59481775 | MsaT003609.1:CDS |
CTGAATCTGAGTCTGCCACA+TGG | 0.647805 | 1:-59482729 | None:intergenic |
GTTGATGTTAACCGAGCGTG+CGG | 0.649710 | 1:+59481867 | MsaT003609.1:CDS |
TTTGAATATGATGTAGGTGA+AGG | 0.654129 | 1:-59482590 | None:intergenic |
GTGGAGCAGCAACAAGACGT+AGG | 0.658824 | 1:+59482149 | MsaT003609.1:CDS |
AAATTAGACTGGTCCATCCG+CGG | 0.659387 | 1:+59483172 | MsaT003609.1:CDS |
TCAAGGAAGAGGATACTGAA+AGG | 0.669438 | 1:+59482056 | MsaT003609.1:CDS |
CACCTACGGCTGAAACCATG+TGG | 0.690190 | 1:+59482714 | MsaT003609.1:CDS |
ATGATCCCTTCCGAAACTGG+GGG | 0.695912 | 1:-59482391 | None:intergenic |
GAAGGGATCATGCAACAAAG+GGG | 0.715610 | 1:+59482403 | MsaT003609.1:CDS |
TTTCCCCAGGATGAACAAAG+GGG | 0.715731 | 1:-59482319 | None:intergenic |
AGAAACAGCACAATGAAGAG+CGG | 0.722067 | 1:-59481904 | None:intergenic |
GATGATATTGATGATGACGA+CGG | 0.728910 | 1:+59482095 | MsaT003609.1:CDS |
GATGCTTGTGAATATGCACA+TGG | 0.754358 | 1:+59482425 | MsaT003609.1:CDS |
GAACCGGTAGAAGCATACAA+CGG | 0.780700 | 1:-59482560 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 59481567 | 59483369 | 59481567 | ID=MsaG003609 |
Chr1 | mRNA | 59481567 | 59483369 | 59481567 | ID=MsaT003609.1;Parent=MsaG003609 |
Chr1 | exon | 59481567 | 59483369 | 59481567 | ID=MsaT003609.1.exon1;Parent=MsaT003609.1 |
Chr1 | CDS | 59481567 | 59483369 | 59481567 | ID=cds.MsaT003609.1;Parent=MsaT003609.1 |
Gene Sequence |
Protein sequence |