Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG003610 | XP_003590850.2 | 81.470 | 653 | 56 | 3 | 1 | 588 | 1 | 653 | 0.0 | 1015 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG003610 | sp|Q9LUZ4|C3H66_ARATH | 49.503 | 604 | 239 | 20 | 21 | 579 | 2 | 584 | 3.03e-180 | 525 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG003610 | tr|G7I4W5|G7I4W5_MEDTR | 81.470 | 653 | 56 | 3 | 1 | 588 | 1 | 653 | 0.0 | 1015 |
| Gene ID | Type | Classification |
|---|---|---|
| MsaG003610 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG003610 | MtrunA17_Chr1g0187591 | 81.470 | 653 | 56 | 3 | 1 | 588 | 1 | 653 | 0.0 | 1015 |
| MsaG003610 | MtrunA17_Chr3g0105131 | 69.435 | 566 | 107 | 7 | 1 | 560 | 1 | 506 | 0.0 | 723 |
| MsaG003610 | MtrunA17_Chr5g0430211 | 53.333 | 675 | 219 | 15 | 1 | 587 | 1 | 667 | 0.0 | 627 |
| MsaG003610 | MtrunA17_Chr3g0105101 | 73.068 | 427 | 60 | 5 | 37 | 462 | 29 | 401 | 0.0 | 602 |
| MsaG003610 | MtrunA17_Chr5g0437251 | 47.040 | 642 | 230 | 15 | 28 | 582 | 25 | 643 | 0.0 | 527 |
| MsaG003610 | MtrunA17_Chr7g0257831 | 40.582 | 653 | 266 | 16 | 33 | 582 | 47 | 680 | 1.27e-142 | 430 |
| MsaG003610 | MtrunA17_Chr3g0113651 | 44.618 | 576 | 194 | 18 | 31 | 579 | 8 | 485 | 2.60e-138 | 412 |
| MsaG003610 | MtrunA17_Chr3g0088521 | 37.688 | 666 | 284 | 18 | 30 | 584 | 42 | 687 | 2.32e-127 | 390 |
| MsaG003610 | MtrunA17_Chr3g0105121 | 55.041 | 367 | 138 | 5 | 222 | 578 | 8 | 357 | 4.69e-123 | 367 |
| MsaG003610 | MtrunA17_Chr1g0171151 | 40.773 | 466 | 220 | 11 | 33 | 451 | 31 | 487 | 9.64e-104 | 325 |
| MsaG003610 | MtrunA17_Chr3g0092171 | 45.706 | 361 | 165 | 6 | 30 | 374 | 80 | 425 | 2.26e-94 | 298 |
| MsaG003610 | MtrunA17_Chr3g0105151 | 57.080 | 226 | 76 | 5 | 383 | 587 | 1 | 226 | 9.47e-69 | 222 |
| MsaG003610 | MtrunA17_Chr3g0105141 | 66.434 | 143 | 47 | 1 | 188 | 329 | 1 | 143 | 2.85e-67 | 216 |
| MsaG003610 | MtrunA17_Chr3g0092221 | 41.096 | 292 | 136 | 4 | 118 | 378 | 33 | 319 | 2.64e-65 | 219 |
| MsaG003610 | MtrunA17_Chr8g0389561 | 53.659 | 164 | 70 | 1 | 219 | 376 | 77 | 240 | 3.51e-55 | 191 |
| MsaG003610 | MtrunA17_Chr6g0487481 | 69.159 | 107 | 33 | 0 | 219 | 325 | 99 | 205 | 4.64e-53 | 185 |
| MsaG003610 | MtrunA17_Chr3g0135351 | 54.658 | 161 | 61 | 4 | 187 | 344 | 25 | 176 | 1.76e-51 | 178 |
| MsaG003610 | MtrunA17_Chr2g0324781 | 61.261 | 111 | 43 | 0 | 223 | 333 | 77 | 187 | 2.17e-48 | 174 |
| MsaG003610 | MtrunA17_Chr4g0040391 | 57.944 | 107 | 45 | 0 | 219 | 325 | 56 | 162 | 5.03e-47 | 167 |
| MsaG003610 | MtrunA17_Chr3g0105111 | 73.864 | 88 | 16 | 2 | 501 | 588 | 1 | 81 | 6.65e-35 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG003610 | AT5G58620.1 | 49.503 | 604 | 239 | 20 | 21 | 579 | 2 | 584 | 0.0 | 525 |
| MsaG003610 | AT3G55980.1 | 46.231 | 597 | 253 | 14 | 1 | 579 | 1 | 547 | 6.37e-165 | 483 |
| MsaG003610 | AT3G55980.2 | 46.231 | 597 | 253 | 14 | 1 | 579 | 68 | 614 | 2.96e-164 | 483 |
| MsaG003610 | AT2G40140.2 | 47.443 | 567 | 234 | 15 | 33 | 579 | 33 | 555 | 2.22e-160 | 471 |
| MsaG003610 | AT2G40140.1 | 47.443 | 567 | 234 | 15 | 33 | 579 | 33 | 555 | 2.22e-160 | 471 |
| MsaG003610 | AT5G12850.1 | 41.534 | 626 | 262 | 21 | 16 | 547 | 20 | 635 | 1.36e-134 | 409 |
| MsaG003610 | AT2G41900.1 | 46.709 | 471 | 184 | 8 | 25 | 447 | 40 | 491 | 2.85e-134 | 408 |
| MsaG003610 | AT4G29190.1 | 42.128 | 235 | 101 | 6 | 212 | 435 | 68 | 278 | 1.50e-54 | 189 |
| MsaG003610 | AT5G07500.1 | 60.331 | 121 | 48 | 0 | 205 | 325 | 34 | 154 | 1.53e-52 | 180 |
| MsaG003610 | AT2G19810.1 | 62.295 | 122 | 44 | 1 | 208 | 327 | 61 | 182 | 7.93e-52 | 182 |
| MsaG003610 | AT2G25900.2 | 58.140 | 129 | 54 | 0 | 219 | 347 | 86 | 214 | 1.15e-51 | 180 |
| MsaG003610 | AT2G25900.1 | 58.140 | 129 | 54 | 0 | 219 | 347 | 86 | 214 | 1.15e-51 | 180 |
| MsaG003610 | AT1G03790.1 | 50.968 | 155 | 68 | 3 | 190 | 340 | 53 | 203 | 6.26e-48 | 172 |
| MsaG003610 | AT5G44260.1 | 56.250 | 128 | 51 | 2 | 201 | 327 | 42 | 165 | 1.69e-45 | 165 |
Find 140 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCTTCATTGTGCTGTTTC+TGG | 0.137009 | 1:+59488540 | MsaT003610.1:CDS |
| ACCTTCTGCCTTCTCTGGTT+GGG | 0.217111 | 1:+59489751 | MsaT003610.1:CDS |
| CTTGTCAAACTTGTTTGATT+AGG | 0.221530 | 1:+59488226 | MsaT003610.1:CDS |
| TTGTCAAACTTGTTTGATTA+GGG | 0.249801 | 1:+59488227 | MsaT003610.1:CDS |
| GGTGTGTTGTCTTATATTCT+TGG | 0.275343 | 1:+59488468 | MsaT003610.1:CDS |
| GAACGCCATTATATCATCTT+TGG | 0.288121 | 1:-59488313 | None:intergenic |
| GAACTTGAAAATCGCCTTAC+AGG | 0.298409 | 1:+59489452 | MsaT003610.1:CDS |
| TATATAGTACAGATGAATTT+AGG | 0.309340 | 1:+59488853 | MsaT003610.1:CDS |
| GACGATTTCCTTAAGAAAAT+AGG | 0.314739 | 1:+59488732 | MsaT003610.1:CDS |
| CTTGTTGTTGCTCCACCATT+TGG | 0.317761 | 1:-59488758 | None:intergenic |
| CTTATGGTTGCTGCTTTGTT+TGG | 0.322501 | 1:+59488438 | MsaT003610.1:CDS |
| GAGTGCCCCTTTGTTCATCC+TGG | 0.343455 | 1:+59488930 | MsaT003610.1:CDS |
| GAACGCAAACCAGCAACTTT+GGG | 0.343665 | 1:+59489577 | MsaT003610.1:CDS |
| GTGTCCCTTGCCCTGAGTTT+CGG | 0.346896 | 1:+59488997 | MsaT003610.1:CDS |
| ATGGAACCTTCTGCCTTCTC+TGG | 0.354986 | 1:+59489746 | MsaT003610.1:CDS |
| TGTTGATCAAATTCCATTGT+TGG | 0.356576 | 1:-59489941 | None:intergenic |
| TCTCCTTCAAATAGGCTTGC+AGG | 0.358629 | 1:+59489482 | MsaT003610.1:CDS |
| AAGGATTGCCCCAAAGTTGC+TGG | 0.360358 | 1:-59489586 | None:intergenic |
| TTCAGCCAAAGATGATATAA+TGG | 0.367048 | 1:+59488308 | MsaT003610.1:CDS |
| AACCTTCTGCCTTCTCTGGT+TGG | 0.384069 | 1:+59489750 | MsaT003610.1:CDS |
| AGAACGCAAACCAGCAACTT+TGG | 0.384644 | 1:+59489576 | MsaT003610.1:CDS |
| TTCACCAAGTGCTTCTTCAA+TGG | 0.385276 | 1:+59489229 | MsaT003610.1:CDS |
| GAAGGTTGGATCAAAAGAAA+TGG | 0.391384 | 1:+59488395 | MsaT003610.1:CDS |
| TGAAGAGAGGACACCTCTTA+TGG | 0.399251 | 1:+59488422 | MsaT003610.1:CDS |
| TTGTCTTATATTCTTGGAAC+CGG | 0.399584 | 1:+59488474 | MsaT003610.1:CDS |
| GTCTTGCATCTCCTTCAAAT+AGG | 0.399881 | 1:+59489474 | MsaT003610.1:CDS |
| CCGCTGATGCAAACGGTAAC+CGG | 0.400035 | 1:+59488625 | MsaT003610.1:CDS |
| GTGAATCAACCCAAGATTCA+TGG | 0.407246 | 1:-59489904 | None:intergenic |
| TTTGAATTGGTAAGATCAAA+AGG | 0.409476 | 1:-59489605 | None:intergenic |
| GCAAACCCTTCTCATGCATC+TGG | 0.411034 | 1:-59489123 | None:intergenic |
| TGTTGCGCTCAATAAAGCTT+TGG | 0.411592 | 1:-59489676 | None:intergenic |
| CTAAGAGTATCTTCGGTTCA+AGG | 0.415813 | 1:+59488673 | MsaT003610.1:CDS |
| TCAAAGTGAAGCCTTGTTCA+AGG | 0.417464 | 1:+59488886 | MsaT003610.1:CDS |
| CCTTCTGCCTTCTCTGGTTG+GGG | 0.417819 | 1:+59489752 | MsaT003610.1:CDS |
| TGCTGCTTTGTTTGGAAGCA+AGG | 0.432478 | 1:+59488446 | MsaT003610.1:CDS |
| TCTGGTTGGGGCTCTCCTGA+TGG | 0.432980 | 1:+59489764 | MsaT003610.1:CDS |
| CAAGGACTTATACTCATGAT+TGG | 0.436359 | 1:+59488904 | MsaT003610.1:CDS |
| TGATGCAATCACATTTGAAT+TGG | 0.437985 | 1:-59489618 | None:intergenic |
| TATATTCCATTCTTTATGTC+AGG | 0.439563 | 1:-59488834 | None:intergenic |
| GTCAGGTAGGGATGGATCAA+TGG | 0.440308 | 1:-59488817 | None:intergenic |
| ATTGCGTTCATTGCCGGGGA+TGG | 0.441862 | 1:-59489801 | None:intergenic |
| AGTGCCCCTTTGTTCATCCT+GGG | 0.442388 | 1:+59488931 | MsaT003610.1:CDS |
| AACAAAGCAGCAACCATAAG+AGG | 0.442942 | 1:-59488435 | None:intergenic |
| TTCTGCTAGCTCAGTTGCCA+TGG | 0.451503 | 1:+59489727 | MsaT003610.1:CDS |
| AAGGTTGGATCAAAAGAAAT+GGG | 0.451915 | 1:+59488396 | MsaT003610.1:CDS |
| TCGGTTTCTAAGAGTATCTT+CGG | 0.453417 | 1:+59488666 | MsaT003610.1:CDS |
| GGAAGGGATCATGCAACAAA+GGG | 0.458959 | 1:+59489018 | MsaT003610.1:CDS |
| ACTCCTGCAAGCCTATTTGA+AGG | 0.462316 | 1:-59489485 | None:intergenic |
| TTATGGTATGGAAGGAAGGT+TGG | 0.462581 | 1:+59488381 | MsaT003610.1:CDS |
| ACCGAGTGTGCGGCTCAGAT+AGG | 0.471991 | 1:+59488511 | MsaT003610.1:CDS |
| TTGATTAGGGAAAATGAAAG+TGG | 0.475212 | 1:+59488240 | MsaT003610.1:CDS |
| CATGATCCCTTCCGAAACTC+AGG | 0.476678 | 1:-59489008 | None:intergenic |
| GTTGATTCACTTGTGAATGA+TGG | 0.479955 | 1:+59489917 | MsaT003610.1:CDS |
| TCCATTCTTTATGTCAGGTA+GGG | 0.481887 | 1:-59488829 | None:intergenic |
| TTCTTTATGTCAGGTAGGGA+TGG | 0.483088 | 1:-59488825 | None:intergenic |
| TACAACGGTCGAAGCTCCTC+TGG | 0.485266 | 1:-59489161 | None:intergenic |
| GCAGCATCATCGCCTACGGC+TGG | 0.487982 | 1:+59489320 | MsaT003610.1:CDS |
| CGACCGTTGTATGCTTCTAC+CGG | 0.490079 | 1:+59489173 | MsaT003610.1:CDS |
| GAAAATAGGTTTCCAAATGG+TGG | 0.491205 | 1:+59488746 | MsaT003610.1:CDS |
| CTTCTCGGCATCTGAAGGGT+AGG | 0.494265 | 1:-59489383 | None:intergenic |
| ATCTGCTTCTCGGCATCTGA+AGG | 0.497474 | 1:-59489388 | None:intergenic |
| AGCCTTGTTCTGTATTGAGC+AGG | 0.498591 | 1:-59489086 | None:intergenic |
| GGGTGAAGGTAGAGCAGAAC+CGG | 0.500946 | 1:-59489192 | None:intergenic |
| CCCTTGCCCTGAGTTTCGGA+AGG | 0.503997 | 1:+59489001 | MsaT003610.1:CDS |
| AGGGTTATGGTATGGAAGGA+AGG | 0.505824 | 1:+59488377 | MsaT003610.1:CDS |
| CCCTATCTGAGCCGCACACT+CGG | 0.510562 | 1:-59488512 | None:intergenic |
| TCCCTACCTGACATAAAGAA+TGG | 0.512480 | 1:+59488828 | MsaT003610.1:CDS |
| TAAGAAAATAGGTTTCCAAA+TGG | 0.517234 | 1:+59488743 | MsaT003610.1:CDS |
| GCTTTGGCTCCGCTTCGAAA+AGG | 0.520561 | 1:-59489660 | None:intergenic |
| TCAGGTAGGGATGGATCAAT+GGG | 0.521506 | 1:-59488816 | None:intergenic |
| AAGTAGGGTTATGGTATGGA+AGG | 0.522426 | 1:+59488373 | MsaT003610.1:CDS |
| GTGCAGTGACTTGATTGTCT+CGG | 0.522663 | 1:+59488647 | MsaT003610.1:CDS |
| CCCTTCCGAAACTCAGGGCA+AGG | 0.525679 | 1:-59489002 | None:intergenic |
| GATCATGATGTTGATGAAGT+AGG | 0.526063 | 1:+59488357 | MsaT003610.1:CDS |
| ATGTTGATGAAGTAGGGTTA+TGG | 0.527912 | 1:+59488364 | MsaT003610.1:CDS |
| GTATCTTCGGTTCAAGGAAG+AGG | 0.528667 | 1:+59488679 | MsaT003610.1:CDS |
| CCGGTTACCGTTTGCATCAG+CGG | 0.529093 | 1:-59488625 | None:intergenic |
| GCTGCTTTGTTTGGAAGCAA+GGG | 0.529208 | 1:+59488447 | MsaT003610.1:CDS |
| ATCATGATGTTGATGAAGTA+GGG | 0.530587 | 1:+59488358 | MsaT003610.1:CDS |
| CCGAGTGTGCGGCTCAGATA+GGG | 0.539522 | 1:+59488512 | MsaT003610.1:CDS |
| AAGGAGATGCAAGACCTGTA+AGG | 0.541933 | 1:-59489466 | None:intergenic |
| AGGAGAGCCCCAACCAGAGA+AGG | 0.547335 | 1:-59489759 | None:intergenic |
| CTCCTGATGGAAAATTAGAC+TGG | 0.548612 | 1:+59489777 | MsaT003610.1:CDS |
| CGGAAGGGATCATGCAACAA+AGG | 0.550435 | 1:+59489017 | MsaT003610.1:CDS |
| CAGAAGTAGCACTTCAACAA+TGG | 0.550435 | 1:+59489841 | MsaT003610.1:CDS |
| TTCTCGGCATCTGAAGGGTA+GGG | 0.550744 | 1:-59489382 | None:intergenic |
| TTCATCCTGGGGAAAATGCA+AGG | 0.557730 | 1:+59488943 | MsaT003610.1:CDS |
| GTTAGTTCCGCTGATGCAAA+CGG | 0.558347 | 1:+59488618 | MsaT003610.1:CDS |
| ATCTGCAGCATCATCGCCTA+CGG | 0.562339 | 1:+59489316 | MsaT003610.1:CDS |
| AAATTAGACTGGTCCATCCC+CGG | 0.564430 | 1:+59489788 | MsaT003610.1:CDS |
| GGTGAATTTGAATATGATGT+GGG | 0.570481 | 1:-59489212 | None:intergenic |
| TCGGTTAACATCAACGCGGC+CGG | 0.572132 | 1:-59488493 | None:intergenic |
| TTCCATTCTTTATGTCAGGT+AGG | 0.576271 | 1:-59488830 | None:intergenic |
| GTGCCCCTTTGTTCATCCTG+GGG | 0.580017 | 1:+59488932 | MsaT003610.1:CDS |
| CATGTGTAATGATATTTCAT+CGG | 0.580467 | 1:-59488975 | None:intergenic |
| CTAATCAAACAAGTTTGACA+AGG | 0.581732 | 1:-59488225 | None:intergenic |
| ATGAAACCAGATGCATGAGA+AGG | 0.586951 | 1:+59489117 | MsaT003610.1:CDS |
| AGAGAAGGCAGAAGGTTCCA+TGG | 0.589015 | 1:-59489744 | None:intergenic |
| TGAAACCAGATGCATGAGAA+GGG | 0.591472 | 1:+59489118 | MsaT003610.1:CDS |
| TTGTTCTGCTGCTTCTGCCG+AGG | 0.591938 | 1:+59488563 | MsaT003610.1:CDS |
| GCAATGAACGCAATAAAATG+AGG | 0.593274 | 1:+59489810 | MsaT003610.1:CDS |
| CCCCAACCAGAGAAGGCAGA+AGG | 0.594817 | 1:-59489752 | None:intergenic |
| CCTTGCCCTGAGTTTCGGAA+GGG | 0.598605 | 1:+59489002 | MsaT003610.1:CDS |
| ATACAGAACAAGGCTTTGCA+AGG | 0.598747 | 1:+59489094 | MsaT003610.1:CDS |
| GTAGGCGATGATGCTGCAGA+TGG | 0.600318 | 1:-59489314 | None:intergenic |
| TGCCACATGGTTCCAGCCGT+AGG | 0.601454 | 1:-59489332 | None:intergenic |
| TGATGCACTTGTATTGATGT+CGG | 0.604850 | 1:-59489554 | None:intergenic |
| GATGAAGTAGGGTTATGGTA+TGG | 0.604921 | 1:+59488369 | MsaT003610.1:CDS |
| GAATCCATTGAAGAAGCACT+TGG | 0.606204 | 1:-59489233 | None:intergenic |
| GTGGAGCAACAACAAGATGT+AGG | 0.606526 | 1:+59488765 | MsaT003610.1:CDS |
| TTGGCTGAAAACTCAAGCAA+AGG | 0.608890 | 1:-59488294 | None:intergenic |
| TGGTGAATTTGAATATGATG+TGG | 0.620600 | 1:-59489213 | None:intergenic |
| TCTGCTTCTCGGCATCTGAA+GGG | 0.621299 | 1:-59489387 | None:intergenic |
| ATGGCAACTGAGCTAGCAGA+AGG | 0.621567 | 1:-59489725 | None:intergenic |
| AAGAAATGGGATATGAAGAG+AGG | 0.624986 | 1:+59488409 | MsaT003610.1:CDS |
| AACGCAAACCAGCAACTTTG+GGG | 0.627454 | 1:+59489578 | MsaT003610.1:CDS |
| AAAACAAAAGTCATGTGCAA+CGG | 0.630659 | 1:+59488189 | None:intergenic |
| AAGCAAAAGTTTGACAACCT+CGG | 0.631058 | 1:-59488580 | None:intergenic |
| TGAGTATAAGTCCTTGAACA+AGG | 0.635355 | 1:-59488897 | None:intergenic |
| ATCCTGCTCAATACAGAACA+AGG | 0.635511 | 1:+59489084 | MsaT003610.1:CDS |
| AATGATATTTCATCGGATCA+CGG | 0.635978 | 1:-59488968 | None:intergenic |
| CTGAATCTGAGTCTGCCACA+TGG | 0.636502 | 1:-59489345 | None:intergenic |
| TTTGAATATGATGTGGGTGA+AGG | 0.636666 | 1:-59489206 | None:intergenic |
| TGTGAATGATGGTCCAACAA+TGG | 0.642483 | 1:+59489928 | MsaT003610.1:CDS |
| GCAGATTGTATCAAAGAAGA+CGG | 0.643659 | 1:-59489272 | None:intergenic |
| CCTTCCGAAACTCAGGGCAA+GGG | 0.646387 | 1:-59489001 | None:intergenic |
| AGACAATCAAGTCACTGCAC+CGG | 0.647436 | 1:-59488644 | None:intergenic |
| GATGCTGCAGATGGAGTCAA+AGG | 0.650089 | 1:-59489305 | None:intergenic |
| ATGATCCCTTCCGAAACTCA+GGG | 0.652947 | 1:-59489007 | None:intergenic |
| GTTGATGTTAACCGAGTGTG+CGG | 0.661303 | 1:+59488501 | MsaT003610.1:CDS |
| TCAAGGAAGAGGATACTACA+AGG | 0.674650 | 1:+59488690 | MsaT003610.1:CDS |
| ACAAGGCAATGTTGATGACG+AGG | 0.685237 | 1:+59488707 | MsaT003610.1:CDS |
| CGCCTACGGCTGGAACCATG+TGG | 0.694097 | 1:+59489330 | MsaT003610.1:CDS |
| GCTGCAGATGGAGTCAAAGG+TGG | 0.696337 | 1:-59489302 | None:intergenic |
| TTTCCCCAGGATGAACAAAG+GGG | 0.706386 | 1:-59488935 | None:intergenic |
| GAAGGGATCATGCAACAAAG+GGG | 0.715610 | 1:+59489019 | MsaT003610.1:CDS |
| AGAAACAGCACAATGAAGAG+CGG | 0.722067 | 1:-59488538 | None:intergenic |
| GATGCTTGTGAATATGCACA+TGG | 0.754358 | 1:+59489041 | MsaT003610.1:CDS |
| GAACCGGTAGAAGCATACAA+CGG | 0.780700 | 1:-59489176 | None:intergenic |
| ACACTCGGTTAACATCAACG+CGG | 0.861019 | 1:-59488497 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 59488201 | 59489967 | 59488201 | ID=MsaG003610 |
| Chr1 | mRNA | 59488201 | 59489967 | 59488201 | ID=MsaT003610.1;Parent=MsaG003610 |
| Chr1 | exon | 59488201 | 59489967 | 59488201 | ID=MsaT003610.1.exon1;Parent=MsaT003610.1 |
| Chr1 | CDS | 59488201 | 59489967 | 59488201 | ID=cds.MsaT003610.1;Parent=MsaT003610.1 |
| Gene Sequence |
| Protein sequence |