Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG003680 | XP_013468809.1 | 93.717 | 191 | 8 | 1 | 8 | 194 | 1 | 191 | 4.81e-128 | 368 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG003680 | sp|Q9M9S0|ZHD4_ARATH | 48.990 | 198 | 84 | 4 | 10 | 190 | 84 | 281 | 2.22e-58 | 188 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG003680 | tr|G7L6E4|G7L6E4_MEDTR | 93.717 | 191 | 8 | 1 | 8 | 194 | 1 | 191 | 2.30e-128 | 368 |
Gene ID | Type | Classification |
---|---|---|
MsaG003680 | TF | zf-HD |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG000080 | MsaG003680 | 0.817534 | 5.459536e-52 | 1.125925e-49 |
MsaG000180 | MsaG003680 | 0.844208 | 1.629982e-58 | 7.276988e-56 |
MsaG000256 | MsaG003680 | 0.809962 | 2.495543e-50 | 4.257686e-48 |
MsaG000722 | MsaG003680 | 0.843652 | 2.292874e-58 | 1.005376e-55 |
MsaG000888 | MsaG003680 | 0.806012 | 1.712908e-49 | 2.658841e-47 |
MsaG000941 | MsaG003680 | 0.808698 | 4.645346e-50 | 7.687969e-48 |
MsaG001325 | MsaG003680 | 0.874857 | 1.006846e-67 | 1.439122e-64 |
MsaG001432 | MsaG003680 | 0.824173 | 1.648509e-53 | 4.054213e-51 |
MsaG002828 | MsaG003680 | 0.839511 | 2.798744e-57 | 1.075874e-54 |
MsaG003529 | MsaG003680 | 0.801467 | 1.488971e-48 | 2.080970e-46 |
MsaG003679 | MsaG003680 | 0.932579 | 1.912770e-94 | 9.646719e-90 |
MsaG003680 | MsaG003998 | 0.885517 | 1.638187e-71 | 3.847594e-68 |
MsaG003680 | MsaG003999 | 0.825166 | 9.645699e-54 | 2.437472e-51 |
MsaG003680 | MsaG004012 | 0.808938 | 4.128118e-50 | 6.871450e-48 |
MsaG003680 | MsaG004041 | 0.846843 | 3.173932e-59 | 1.546031e-56 |
MsaG003680 | MsaG004229 | 0.825835 | 6.707064e-54 | 1.726593e-51 |
MsaG003680 | MsaG004225 | 0.822848 | 3.354770e-53 | 7.959670e-51 |
MsaG003680 | MsaG004185 | 0.851994 | 1.182026e-60 | 6.865616e-58 |
MsaG003680 | MsaG004208 | 0.805208 | 2.520937e-49 | 3.840420e-47 |
MsaG003680 | MsaG004534 | 0.813901 | 3.493094e-51 | 6.568530e-49 |
MsaG003680 | MsaG004824 | 0.827913 | 2.150495e-54 | 5.866447e-52 |
MsaG003680 | MsaG004989 | 0.884866 | 2.861124e-71 | 6.510004e-68 |
MsaG003680 | MsaG005305 | 0.838380 | 5.472359e-57 | 2.030723e-54 |
MsaG003680 | MsaG005331 | 0.838600 | 4.806088e-57 | 1.795862e-54 |
MsaG003680 | MsaG005774 | 0.821687 | 6.220169e-53 | 1.430521e-50 |
MsaG003680 | MsaG005807 | 0.814818 | 2.195206e-51 | 4.224110e-49 |
MsaG003680 | MsaG005813 | 0.814578 | 2.478491e-51 | 4.740289e-49 |
MsaG003680 | MsaG005891 | 0.804526 | 3.494856e-49 | 5.240433e-47 |
MsaG003680 | MsaG006217 | 0.823283 | 2.658535e-53 | 6.382591e-51 |
MsaG003680 | MsaG006285 | 0.809150 | 3.720150e-50 | 6.224069e-48 |
MsaG003680 | MsaG006338 | 0.828909 | 1.239397e-54 | 3.476796e-52 |
MsaG003680 | MsaG006387 | 0.804819 | 3.038503e-49 | 4.587246e-47 |
MsaG003680 | MsaG006801 | 0.834079 | 6.700919e-56 | 2.183455e-53 |
MsaG003680 | MsaG006997 | 0.884671 | 3.379466e-71 | 7.615519e-68 |
MsaG003680 | MsaG007600 | 0.818381 | 3.521318e-52 | 7.422429e-50 |
MsaG003680 | MsaG007684 | 0.833565 | 8.993714e-56 | 2.886675e-53 |
MsaG003680 | MsaG008069 | 0.822883 | 3.292060e-53 | 7.818340e-51 |
MsaG003680 | MsaG008088 | 0.842068 | 6.021063e-58 | 2.509363e-55 |
MsaG003680 | MsaG008105 | 0.824327 | 1.517889e-53 | 3.748862e-51 |
MsaG003680 | MsaG008110 | 0.831640 | 2.686539e-55 | 8.151665e-53 |
MsaG003680 | MsaG008480 | 0.814002 | 3.317990e-51 | 6.254962e-49 |
MsaG003680 | MsaG008434 | 0.824244 | 1.587318e-53 | 3.911283e-51 |
MsaG003680 | MsaG009477 | 0.800961 | 1.887574e-48 | 2.607999e-46 |
MsaG003680 | MsaG009785 | 0.884274 | 4.732912e-71 | 1.046551e-67 |
MsaG003680 | MsaG009787 | 0.845681 | 6.554676e-59 | 3.071790e-56 |
MsaG003680 | MsaG010221 | 0.831768 | 2.499445e-55 | 7.612768e-53 |
MsaG003680 | MsaG010249 | 0.812533 | 6.950988e-51 | 1.263134e-48 |
MsaG003680 | MsaG010595 | 0.814972 | 2.029620e-51 | 3.920693e-49 |
MsaG003680 | MsaG011013 | 0.843251 | 2.930865e-58 | 1.268672e-55 |
MsaG003680 | MsaG011861 | 0.840871 | 1.240095e-57 | 4.975310e-55 |
MsaG003680 | MsaG012591 | 0.832601 | 1.558552e-55 | 4.862840e-53 |
MsaG003680 | MsaG012704 | 0.840663 | 1.405320e-57 | 5.601363e-55 |
MsaG003680 | MsaG013962 | 0.804033 | 4.422064e-49 | 6.555780e-47 |
MsaG003680 | MsaG014719 | 0.814944 | 2.058826e-51 | 3.974200e-49 |
MsaG003680 | MsaG014856 | 0.804107 | 4.268390e-49 | 6.338833e-47 |
MsaG003680 | MsaG015318 | 0.817269 | 6.261826e-52 | 1.282641e-49 |
MsaG003680 | MsaG016421 | 0.818023 | 4.241562e-52 | 8.858460e-50 |
MsaG003680 | MsaG016961 | 0.805612 | 2.076566e-49 | 3.193303e-47 |
MsaG003680 | MsaG017170 | 0.865990 | 7.925030e-65 | 7.789548e-62 |
MsaG003680 | MsaG017269 | 0.802228 | 1.040583e-48 | 1.479727e-46 |
MsaG003680 | MsaG017480 | 0.825258 | 9.176794e-54 | 2.324809e-51 |
MsaG003680 | MsaG017690 | 0.818793 | 2.843479e-52 | 6.058177e-50 |
MsaG003680 | MsaG018021 | 0.806972 | 1.076599e-49 | 1.709528e-47 |
MsaG003680 | MsaG018525 | 0.840761 | 1.324721e-57 | 5.296200e-55 |
MsaG003680 | MsaG018848 | 0.800819 | 2.017097e-48 | 2.778119e-46 |
MsaG003680 | MsaG018909 | 0.806938 | 1.094883e-49 | 1.737113e-47 |
MsaG003680 | MsaG019007 | 0.804696 | 3.222164e-49 | 4.850510e-47 |
MsaG003680 | MsaG019297 | 0.830358 | 5.527010e-55 | 1.615982e-52 |
MsaG003680 | MsaG019795 | 0.821261 | 7.793344e-53 | 1.772217e-50 |
MsaG003680 | MsaG019814 | 0.834299 | 5.906335e-56 | 1.937367e-53 |
MsaG003680 | MsaG020338 | 0.811303 | 1.284137e-50 | 2.263874e-48 |
MsaG003680 | MsaG020421 | 0.825584 | 7.690198e-54 | 1.965782e-51 |
MsaG003680 | MsaG020487 | 0.841426 | 8.880580e-58 | 3.626154e-55 |
MsaG003680 | MsaG020787 | 0.803227 | 6.487419e-49 | 9.439492e-47 |
MsaG003680 | MsaG020810 | 0.823780 | 2.036812e-53 | 4.956259e-51 |
MsaG003680 | MsaG022503 | 0.921410 | 9.561528e-88 | 1.999122e-83 |
MsaG003680 | MsaG022551 | 0.824272 | 1.563474e-53 | 3.855526e-51 |
MsaG003680 | MsaG023762 | 0.809375 | 3.331076e-50 | 5.603270e-48 |
MsaG003680 | MsaG023960 | 0.811223 | 1.336564e-50 | 2.351646e-48 |
MsaG003680 | MsaG024387 | 0.801275 | 1.629082e-48 | 2.266870e-46 |
MsaG003680 | MsaG024484 | 0.811579 | 1.119349e-50 | 1.986744e-48 |
MsaG003680 | MsaG024640 | 0.806564 | 1.312241e-49 | 2.063805e-47 |
MsaG003680 | MsaG025002 | 0.806410 | 1.413174e-49 | 2.214534e-47 |
MsaG003680 | MsaG025085 | 0.800968 | 1.880811e-48 | 2.599111e-46 |
MsaG003680 | MsaG025282 | 0.806553 | 1.318742e-49 | 2.073526e-47 |
MsaG003680 | MsaG025315 | 0.805336 | 2.371006e-49 | 3.622721e-47 |
MsaG003680 | MsaG025640 | 0.841340 | 9.351142e-58 | 3.807737e-55 |
MsaG003680 | MsaG025644 | 0.823751 | 2.069195e-53 | 5.030998e-51 |
MsaG003680 | MsaG027030 | 0.830540 | 4.989166e-55 | 1.466296e-52 |
MsaG003680 | MsaG027087 | 0.819129 | 2.386897e-52 | 5.130636e-50 |
MsaG003680 | MsaG027302 | 0.830321 | 5.640401e-55 | 1.647448e-52 |
MsaG003680 | MsaG027383 | 0.826086 | 5.852400e-54 | 1.517140e-51 |
MsaG003680 | MsaG028064 | 0.828148 | 1.888950e-54 | 5.187098e-52 |
MsaG003680 | MsaG028256 | 0.823093 | 2.943472e-53 | 7.030093e-51 |
MsaG003680 | MsaG028568 | 0.805101 | 2.654089e-49 | 4.033166e-47 |
MsaG003680 | MsaG028804 | 0.810945 | 1.533958e-50 | 2.680621e-48 |
MsaG003680 | MsaG028825 | 0.850301 | 3.532314e-60 | 1.934101e-57 |
MsaG003680 | MsaG028843 | 0.818423 | 3.446915e-52 | 7.273368e-50 |
MsaG003680 | MsaG029482 | 0.811836 | 9.848576e-51 | 1.759094e-48 |
MsaG003680 | MsaG029694 | 0.821866 | 5.655693e-53 | 1.306912e-50 |
MsaG003680 | MsaG029719 | 0.824897 | 1.116056e-53 | 2.799549e-51 |
MsaG003680 | MsaG029891 | 0.825934 | 6.357512e-54 | 1.641151e-51 |
MsaG003680 | MsaG030045 | 0.803959 | 4.581003e-49 | 6.779451e-47 |
MsaG003680 | MsaG030158 | 0.822095 | 5.009184e-53 | 1.164604e-50 |
MsaG003680 | MsaG031374 | 0.803297 | 6.274729e-49 | 9.144717e-47 |
MsaG003680 | MsaG032741 | 0.836053 | 2.141355e-56 | 7.402670e-54 |
MsaG003680 | MsaG033687 | 0.808973 | 4.058874e-50 | 6.761762e-48 |
MsaG003680 | MsaG034133 | 0.824294 | 1.544848e-53 | 3.811969e-51 |
MsaG003680 | MsaG034418 | 0.816691 | 8.428762e-52 | 1.700917e-49 |
MsaG003680 | MsaG035255 | 0.808242 | 5.803978e-50 | 9.500507e-48 |
MsaG003680 | MsaG035675 | 0.805949 | 1.765372e-49 | 2.736323e-47 |
MsaG003680 | MsaG035749 | 0.805627 | 2.061313e-49 | 3.171006e-47 |
MsaG003680 | MsaG036241 | 0.835862 | 2.393385e-56 | 8.226408e-54 |
MsaG003680 | MsaG036303 | 0.811104 | 1.417843e-50 | 2.487380e-48 |
MsaG003680 | MsaG039166 | 0.837910 | 7.222248e-57 | 2.641493e-54 |
MsaG003680 | MsaG039490 | 0.887991 | 1.911997e-72 | 5.082727e-69 |
MsaG003680 | MsaG040548 | 0.800866 | 1.972976e-48 | 2.720224e-46 |
MsaG003680 | MsaG040649 | 0.808501 | 5.115275e-50 | 8.425332e-48 |
MsaG003680 | MsaG040713 | 0.805675 | 2.014797e-49 | 3.102886e-47 |
MsaG003680 | MsaG040853 | 0.817820 | 4.710986e-52 | 9.787513e-50 |
MsaG003680 | MsaG040954 | 0.838910 | 3.998742e-57 | 1.508730e-54 |
MsaG003680 | MsaG042566 | 0.875424 | 6.460272e-68 | 9.466886e-65 |
MsaG003680 | MsaG043000 | 0.852077 | 1.119828e-60 | 6.522911e-58 |
MsaG003680 | MsaG044092 | 0.818927 | 2.651675e-52 | 5.669554e-50 |
MsaG003680 | MsaG044113 | 0.824865 | 1.135494e-53 | 2.845769e-51 |
MsaG003680 | MsaG044333 | 0.818761 | 2.891131e-52 | 6.154516e-50 |
MsaG003680 | MsaG044501 | 0.832596 | 1.563352e-55 | 4.876966e-53 |
MsaG003680 | MsaG044598 | 0.801582 | 1.410690e-48 | 1.976689e-46 |
MsaG003680 | MsaG044880 | 0.806951 | 1.087992e-49 | 1.726732e-47 |
MsaG003680 | MsaG045016 | 0.857270 | 3.562553e-62 | 2.500049e-59 |
MsaG003680 | MsaG045118 | 0.833430 | 9.717760e-56 | 3.106792e-53 |
MsaG003680 | MsaG045566 | 0.870054 | 3.964960e-66 | 4.605210e-63 |
MsaG003680 | MsaG045590 | 0.804098 | 4.286895e-49 | 6.364947e-47 |
MsaG003680 | MsaG045703 | 0.819670 | 1.798661e-52 | 3.921307e-50 |
MsaG003680 | MsaG046445 | 0.836556 | 1.597647e-56 | 5.607225e-54 |
MsaG003680 | MsaG046750 | 0.818975 | 2.585458e-52 | 5.535085e-50 |
MsaG003680 | MsaG046930 | 0.804469 | 3.592186e-49 | 5.379171e-47 |
MsaG003680 | MsaG002984 | 0.861027 | 2.697586e-63 | 2.180920e-60 |
MsaG003680 | MsaG002745 | 0.806027 | 1.700297e-49 | 2.640259e-47 |
MsaG003680 | MsaG002307 | 0.849257 | 6.896808e-60 | 3.644374e-57 |
MsaG003680 | MsaG009209 | 0.826644 | 4.315228e-54 | 1.136087e-51 |
MsaG003680 | MsaG008207 | 0.857854 | 2.397292e-62 | 1.719339e-59 |
MsaG003680 | MsaG007673 | 0.899638 | 3.729819e-77 | 1.867959e-73 |
MsaG003680 | MsaG008800 | 0.840570 | 1.486200e-57 | 5.906535e-55 |
MsaG003680 | MsaG014863 | 0.822816 | 3.412171e-53 | 8.088952e-51 |
MsaG003680 | MsaG013008 | 0.814596 | 2.456109e-51 | 4.699635e-49 |
MsaG003680 | MsaG013872 | 0.810114 | 2.315142e-50 | 3.964535e-48 |
MsaG003680 | MsaG011654 | 0.809425 | 3.250378e-50 | 5.474356e-48 |
MsaG003680 | MsaG011633 | 0.802303 | 1.004230e-48 | 1.430545e-46 |
MsaG003680 | MsaG013526 | 0.832851 | 1.351868e-55 | 4.248751e-53 |
MsaG003680 | MsaG013071 | 0.834230 | 6.145206e-56 | 2.011489e-53 |
MsaG003680 | MsaG029782 | 0.886378 | 7.799187e-72 | 1.911942e-68 |
MsaG003680 | MsaG025855 | 0.808113 | 6.181329e-50 | 1.008673e-47 |
MsaG003680 | MsaG032663 | 0.815397 | 1.634428e-51 | 3.191437e-49 |
MsaG003680 | MsaG034613 | 0.800919 | 1.924315e-48 | 2.656286e-46 |
MsaG003680 | MsaG032935 | 0.818789 | 2.849049e-52 | 6.069531e-50 |
MsaG003680 | MsaG030688 | 0.835015 | 3.908117e-56 | 1.309711e-53 |
MsaG003680 | MsaG031905 | 0.806109 | 1.634796e-49 | 2.543524e-47 |
MsaG003680 | MsaG030748 | 0.802372 | 9.720689e-49 | 1.386921e-46 |
MsaG003680 | MsaG033581 | 0.843541 | 2.454428e-58 | 1.072391e-55 |
MsaG003680 | MsaG030270 | 0.800749 | 2.084466e-48 | 2.866429e-46 |
MsaG003680 | MsaG035313 | 0.817923 | 4.466666e-52 | 9.304453e-50 |
MsaG003680 | MsaG036963 | 0.828052 | 1.991381e-54 | 5.453651e-52 |
MsaG003680 | MsaG036618 | 0.809553 | 3.051930e-50 | 5.156033e-48 |
MsaG003680 | MsaG039324 | 0.802638 | 8.574039e-49 | 1.230777e-46 |
MsaG003680 | MsaG042304 | 0.801049 | 1.811237e-48 | 2.507484e-46 |
MsaG003680 | MsaG043464 | 0.839600 | 2.653563e-57 | 1.022895e-54 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG003680 | MtrunA17_Chr1g0188441 | 93.717 | 191 | 8 | 1 | 8 | 194 | 1 | 191 | 4.43e-132 | 368 |
MsaG003680 | MtrunA17_Chr4g0076821 | 40.928 | 237 | 80 | 5 | 15 | 191 | 112 | 348 | 7.57e-56 | 180 |
MsaG003680 | MtrunA17_Chr5g0412501 | 46.193 | 197 | 84 | 4 | 14 | 189 | 76 | 271 | 2.66e-53 | 171 |
MsaG003680 | MtrunA17_Chr3g0133181 | 44.000 | 200 | 90 | 3 | 13 | 191 | 77 | 275 | 4.12e-50 | 163 |
MsaG003680 | MtrunA17_Chr5g0404271 | 40.887 | 203 | 89 | 5 | 16 | 191 | 99 | 297 | 1.99e-46 | 154 |
MsaG003680 | MtrunA17_Chr5g0427051 | 39.906 | 213 | 90 | 4 | 14 | 189 | 56 | 267 | 5.15e-46 | 152 |
MsaG003680 | MtrunA17_Chr7g0217231 | 41.176 | 204 | 87 | 6 | 13 | 189 | 85 | 282 | 8.40e-45 | 151 |
MsaG003680 | MtrunA17_Chr8g0367691 | 37.143 | 210 | 87 | 4 | 15 | 189 | 68 | 267 | 4.11e-41 | 140 |
MsaG003680 | MtrunA17_Chr2g0315941 | 36.792 | 212 | 84 | 5 | 16 | 189 | 68 | 267 | 5.93e-41 | 139 |
MsaG003680 | MtrunA17_Chr6g0453231 | 39.189 | 222 | 59 | 7 | 16 | 189 | 91 | 284 | 4.53e-40 | 139 |
MsaG003680 | MtrunA17_Chr6g0479901 | 38.506 | 174 | 71 | 7 | 16 | 185 | 19 | 160 | 2.01e-33 | 117 |
MsaG003680 | MtrunA17_Chr8g0361671 | 63.492 | 63 | 23 | 0 | 127 | 189 | 271 | 333 | 1.21e-21 | 90.9 |
MsaG003680 | MtrunA17_Chr8g0361671 | 63.793 | 58 | 19 | 1 | 12 | 67 | 60 | 117 | 2.78e-19 | 84.3 |
MsaG003680 | MtrunA17_Chr3g0092371 | 58.929 | 56 | 23 | 0 | 14 | 69 | 18 | 73 | 1.22e-19 | 79.3 |
MsaG003680 | MtrunA17_Chr6g0453221 | 60.000 | 55 | 18 | 1 | 10 | 64 | 15 | 65 | 5.49e-17 | 72.4 |
MsaG003680 | MtrunA17_Chr4g0060731 | 55.172 | 58 | 21 | 2 | 10 | 66 | 19 | 72 | 1.55e-14 | 65.9 |
MsaG003680 | MtrunA17_Chr8g0357741 | 37.624 | 101 | 43 | 2 | 89 | 189 | 16 | 96 | 2.67e-14 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG003680 | AT1G14440.1 | 48.990 | 198 | 84 | 4 | 10 | 190 | 84 | 281 | 2.25e-59 | 188 |
MsaG003680 | AT1G14440.2 | 48.990 | 198 | 84 | 4 | 10 | 190 | 84 | 281 | 2.25e-59 | 188 |
MsaG003680 | AT2G02540.2 | 48.058 | 206 | 81 | 5 | 9 | 189 | 80 | 284 | 9.00e-59 | 187 |
MsaG003680 | AT2G02540.1 | 48.058 | 206 | 81 | 5 | 9 | 189 | 80 | 284 | 9.00e-59 | 187 |
MsaG003680 | AT4G24660.1 | 47.486 | 179 | 85 | 2 | 14 | 189 | 47 | 219 | 1.72e-53 | 170 |
MsaG003680 | AT4G24660.2 | 47.727 | 176 | 83 | 2 | 14 | 186 | 47 | 216 | 2.29e-52 | 168 |
MsaG003680 | AT5G65410.1 | 43.478 | 184 | 89 | 2 | 15 | 188 | 74 | 252 | 8.64e-49 | 160 |
MsaG003680 | AT1G69600.1 | 41.919 | 198 | 91 | 5 | 8 | 186 | 23 | 215 | 4.75e-46 | 152 |
MsaG003680 | AT2G18350.1 | 43.011 | 186 | 95 | 3 | 14 | 191 | 80 | 262 | 2.03e-45 | 151 |
MsaG003680 | AT5G60480.1 | 46.111 | 180 | 84 | 7 | 10 | 183 | 31 | 203 | 1.47e-44 | 147 |
MsaG003680 | AT5G15210.1 | 43.229 | 192 | 87 | 6 | 9 | 183 | 49 | 235 | 5.33e-42 | 142 |
MsaG003680 | AT3G28920.1 | 41.429 | 210 | 78 | 5 | 14 | 186 | 50 | 251 | 6.32e-41 | 140 |
MsaG003680 | AT3G50890.1 | 41.451 | 193 | 99 | 3 | 14 | 194 | 58 | 248 | 4.02e-40 | 137 |
MsaG003680 | AT5G42780.1 | 38.095 | 189 | 105 | 6 | 3 | 184 | 53 | 236 | 9.52e-27 | 102 |
MsaG003680 | AT1G75240.1 | 67.241 | 58 | 19 | 0 | 11 | 68 | 71 | 128 | 1.10e-24 | 98.6 |
MsaG003680 | AT1G75240.1 | 55.882 | 68 | 30 | 0 | 127 | 194 | 240 | 307 | 1.15e-19 | 85.1 |
MsaG003680 | AT1G74660.2 | 61.404 | 57 | 22 | 0 | 14 | 70 | 37 | 93 | 1.40e-21 | 85.1 |
MsaG003680 | AT1G74660.1 | 61.404 | 57 | 22 | 0 | 14 | 70 | 37 | 93 | 1.84e-21 | 84.7 |
MsaG003680 | AT5G39760.1 | 57.576 | 66 | 28 | 0 | 127 | 192 | 200 | 265 | 1.57e-20 | 87.8 |
MsaG003680 | AT5G39760.1 | 56.667 | 60 | 24 | 1 | 12 | 69 | 52 | 111 | 8.39e-16 | 74.7 |
MsaG003680 | AT3G28917.1 | 60.345 | 58 | 22 | 1 | 14 | 70 | 31 | 88 | 1.36e-19 | 80.1 |
MsaG003680 | AT1G14687.1 | 30.857 | 175 | 103 | 6 | 16 | 186 | 7 | 167 | 5.56e-19 | 80.5 |
MsaG003680 | AT1G18835.1 | 61.404 | 57 | 19 | 1 | 14 | 70 | 24 | 77 | 8.54e-19 | 77.4 |
Find 22 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAACATTAATGCACCTTTCT+TGG | 0.224192 | 1:-60483780 | MsaT003680.1:CDS |
CTATGAGAAAGATTGTATTA+AGG | 0.356438 | 1:-60483702 | MsaT003680.1:CDS |
GATGTTGTGCTTTGCAGAAA+AGG | 0.435319 | 1:-60483603 | MsaT003680.1:CDS |
GCTTGTAGAAAGATTTCTCT+TGG | 0.457726 | 1:+60483466 | None:intergenic |
AAGAACCATGCAGCTACAAT+TGG | 0.462343 | 1:-60483965 | MsaT003680.1:CDS |
TATTATGCATCCACACTTTG+AGG | 0.473414 | 1:+60483504 | None:intergenic |
ATTGGTGGCAATGCAATTGA+TGG | 0.483673 | 1:-60483947 | MsaT003680.1:CDS |
TTATCTCCTAACAACAAAAG+TGG | 0.483711 | 1:-60483752 | MsaT003680.1:CDS |
GGTGCATTAATGTTATGATC+AGG | 0.492826 | 1:+60483788 | None:intergenic |
GAAAGATTGTATTAAGGATG+TGG | 0.506741 | 1:-60483696 | MsaT003680.1:CDS |
TAAGTTCAGTAAAGAACAGA+AGG | 0.524622 | 1:-60483630 | MsaT003680.1:CDS |
AACCATGCAGCTACAATTGG+TGG | 0.533193 | 1:-60483962 | MsaT003680.1:CDS |
GGAGATAAATGAGCCAAGAA+AGG | 0.551764 | 1:+60483767 | None:intergenic |
AAAAGATGATAGTTAAGAAG+AGG | 0.567751 | 1:-60483661 | MsaT003680.1:CDS |
TGCCACCAATTGTAGCTGCA+TGG | 0.577086 | 1:+60483960 | None:intergenic |
TCATAGTAAGACTGATCAGA+AGG | 0.587248 | 1:+60483719 | None:intergenic |
GGCAATGCAATTGATGGATG+TGG | 0.602522 | 1:-60483941 | MsaT003680.1:CDS |
AGAGAAGAATCCTCAAAGTG+TGG | 0.619701 | 1:-60483514 | MsaT003680.1:CDS |
TTGCAGAAAAGGCTGAGTGG+AGG | 0.634235 | 1:-60483592 | MsaT003680.1:CDS |
TCAGAAGCTAGATGAATCTG+TGG | 0.653987 | 1:-60483567 | MsaT003680.1:CDS |
TGTGGTGAGTTCATGCCAAG+TGG | 0.691258 | 1:-60483923 | MsaT003680.1:CDS |
GCTTTGCAGAAAAGGCTGAG+TGG | 0.707295 | 1:-60483595 | MsaT003680.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 60483463 | 60484047 | 60483463 | ID=MsaG003680 |
Chr1 | mRNA | 60483463 | 60484047 | 60483463 | ID=MsaT003680.1;Parent=MsaG003680 |
Chr1 | exon | 60483463 | 60484047 | 60483463 | ID=MsaT003680.1.exon1;Parent=MsaT003680.1 |
Chr1 | CDS | 60483463 | 60484047 | 60483463 | ID=cds.MsaT003680.1;Parent=MsaT003680.1 |
Gene Sequence |
Protein sequence |