AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG003767


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG003767 MtrunA17_Chr1g0189381 97.203 429 12 0 26 454 27 455 0.0 865
MsaG003767 MtrunA17_Chr7g0249451 66.975 433 138 2 26 454 25 456 0.0 610
MsaG003767 MtrunA17_Chr1g0189391 71.722 389 40 6 513 886 1 334 3.04e-170 497
MsaG003767 MtrunA17_Chr7g0221681 55.663 415 181 2 31 443 35 448 8.69e-166 491
MsaG003767 MtrunA17_Chr7g0265331 41.568 421 227 7 31 439 38 451 1.08e-101 325
MsaG003767 MtrunA17_Chr6g0485431 49.725 364 166 7 452 813 1 349 7.57e-101 318
MsaG003767 MtrunA17_Chr4g0027681 40.241 415 230 7 35 438 39 446 2.85e-96 311
MsaG003767 MtrunA17_Chr2g0320621 42.512 414 222 6 35 438 40 447 3.89e-96 310
MsaG003767 MtrunA17_Chr1g0179751 39.671 426 231 10 31 439 64 480 3.42e-95 309
MsaG003767 MtrunA17_Chr5g0401601 31.429 385 210 16 67 429 87 439 6.25e-36 145
MsaG003767 MtrunA17_Chr4g0053721 29.765 383 219 14 67 429 79 431 1.57e-32 134
MsaG003767 MtrunA17_Chr3g0130741 27.404 416 248 15 44 438 62 444 3.14e-31 128
MsaG003767 MtrunA17_Chr1g0159791 27.960 397 244 16 48 428 39 409 1.49e-30 125
MsaG003767 MtrunA17_Chr6g0475351 61.446 83 32 0 111 193 4 86 5.19e-30 114
MsaG003767 MtrunA17_Chr8g0352661 27.487 382 229 14 67 429 85 437 1.72e-29 122
MsaG003767 MtrunA17_Chr4g0010951 27.230 426 240 15 49 428 44 445 1.85e-29 122
MsaG003767 MtrunA17_Chr5g0435871 27.034 381 236 15 62 429 84 435 3.50e-29 121
MsaG003767 MtrunA17_Chr5g0435971 26.772 381 237 15 62 429 81 432 7.46e-28 117
MsaG003767 MtrunA17_Chr3g0099891 29.024 379 214 14 66 428 115 454 1.53e-27 117
MsaG003767 MtrunA17_Chr8g0371351 26.392 413 255 17 38 428 64 449 2.42e-27 117
MsaG003767 MtrunA17_Chr8g0386441 27.650 434 247 20 12 429 48 430 4.07e-27 115
MsaG003767 MtrunA17_Chr5g0395871 28.947 380 227 17 64 430 77 426 6.32e-27 114
MsaG003767 MtrunA17_Chr4g0001991 29.306 389 224 17 59 429 163 518 1.01e-26 115
MsaG003767 MtrunA17_Chr3g0130931 29.396 381 217 19 67 429 103 449 1.32e-26 114
MsaG003767 MtrunA17_Chr2g0291201 29.442 394 217 16 60 428 94 451 1.71e-26 114
MsaG003767 MtrunA17_Chr3g0087851 28.266 421 252 17 31 429 45 437 1.94e-26 113
MsaG003767 MtrunA17_Chr3g0124421 26.506 415 262 16 38 428 55 450 2.18e-26 114
MsaG003767 MtrunA17_Chr2g0307991 28.457 376 224 18 69 429 60 405 2.51e-26 112
MsaG003767 MtrunA17_Chr8g0384731 26.914 405 247 18 51 436 58 432 2.84e-26 112
MsaG003767 MtrunA17_Chr8g0352671 27.441 379 230 14 67 429 88 437 3.82e-26 112
MsaG003767 MtrunA17_Chr5g0406001 28.010 382 222 18 68 428 112 461 1.27e-25 112
MsaG003767 MtrunA17_Chr5g0442921 28.030 396 235 16 60 429 183 554 2.32e-25 111
MsaG003767 MtrunA17_Chr2g0310801 29.223 373 227 15 67 429 89 434 5.21e-25 109
MsaG003767 MtrunA17_Chr2g0308001 28.272 382 224 18 69 430 59 410 1.50e-24 107
MsaG003767 MtrunA17_Chr6g0484731 27.561 410 250 17 51 438 176 560 1.50e-24 109
MsaG003767 MtrunA17_Chr8g0371371 25.653 421 259 17 36 432 73 463 1.51e-24 108
MsaG003767 MtrunA17_Chr2g0333991 26.000 400 252 15 41 423 58 430 1.83e-24 107
MsaG003767 MtrunA17_Chr5g0395931 29.101 378 225 17 67 429 87 436 1.95e-24 107
MsaG003767 MtrunA17_Chr5g0419291 27.005 374 231 14 67 428 85 428 2.60e-24 107
MsaG003767 MtrunA17_Chr6g0484901 26.359 368 230 14 69 428 157 491 3.21e-24 107
MsaG003767 MtrunA17_Chr3g0095891 29.676 401 219 21 60 428 89 458 1.03e-23 105
MsaG003767 MtrunA17_Chr5g0425141 25.532 376 246 13 68 432 101 453 1.29e-23 105
MsaG003767 MtrunA17_Chr5g0395911 27.778 378 229 16 67 429 66 414 3.25e-23 103
MsaG003767 MtrunA17_Chr7g0275731 25.326 383 241 14 60 428 133 484 3.32e-23 104
MsaG003767 MtrunA17_Chr2g0310831 26.244 442 273 18 3 429 38 441 1.08e-21 99.4
MsaG003767 MtrunA17_Chr8g0390761 24.495 396 247 14 40 421 91 448 1.88e-21 98.6
MsaG003767 MtrunA17_Chr2g0311451 24.878 410 256 15 41 429 58 436 2.17e-21 98.2
MsaG003767 MtrunA17_Chr7g0218081 51.852 81 38 1 586 666 387 466 2.81e-21 98.6
MsaG003767 MtrunA17_Chr7g0218081 43.023 86 43 3 609 694 228 307 1.26e-11 68.2
MsaG003767 MtrunA17_Chr7g0243891 35.106 188 103 7 529 702 280 462 3.37e-21 98.6
MsaG003767 MtrunA17_Chr1g0212321 27.200 375 231 15 60 423 138 481 8.95e-21 96.7
MsaG003767 MtrunA17_Chr5g0415951 27.704 379 228 14 69 431 89 437 9.00e-21 96.3
MsaG003767 MtrunA17_Chr7g0249311 49.474 95 44 3 573 666 357 448 9.68e-21 97.8
MsaG003767 MtrunA17_Chr1g0210201 25.263 380 238 14 60 428 123 467 9.75e-21 96.7
MsaG003767 MtrunA17_Chr2g0310821 27.851 377 222 17 67 431 107 445 2.34e-20 95.1
MsaG003767 MtrunA17_Chr5g0445311 37.956 137 81 2 530 666 288 420 2.35e-20 95.9
MsaG003767 MtrunA17_Chr4g0019931 35.246 122 78 1 73 193 1 122 3.16e-20 87.4
MsaG003767 MtrunA17_Chr5g0418191 47.423 97 50 1 591 687 302 397 5.11e-20 94.0
MsaG003767 MtrunA17_Chr3g0079691 38.608 158 81 5 548 697 439 588 5.66e-20 95.5
MsaG003767 MtrunA17_Chr4g0042831 40.800 125 70 4 572 694 240 362 7.00e-20 92.8
MsaG003767 MtrunA17_Chr4g0004911 45.714 105 55 2 562 666 290 392 1.37e-19 93.2
MsaG003767 MtrunA17_Chr1g0150801 50.667 75 36 1 592 666 85 158 1.38e-19 86.7
MsaG003767 MtrunA17_Chr1g0165201 27.385 325 202 13 60 374 120 420 1.72e-19 92.8
MsaG003767 MtrunA17_Chr3g0129361 52.000 75 35 1 594 668 129 202 1.92e-19 88.2
MsaG003767 MtrunA17_Chr3g0101131 35.404 161 90 3 506 666 325 471 2.49e-19 93.2
MsaG003767 MtrunA17_Chr7g0249301 54.930 71 31 1 596 666 279 348 3.03e-19 90.9
MsaG003767 MtrunA17_Chr6g0486981 23.947 380 239 13 69 429 89 437 3.14e-19 91.7
MsaG003767 MtrunA17_Chr8g0383351 53.521 71 32 1 601 671 152 221 3.23e-19 87.8
MsaG003767 MtrunA17_Chr8g0383251 51.389 72 34 1 595 666 94 164 3.27e-19 86.3
MsaG003767 MtrunA17_Chr5g0432161 52.500 80 37 1 587 666 399 477 3.56e-19 92.4
MsaG003767 MtrunA17_Chr2g0312941 26.573 286 174 11 62 326 81 351 4.43e-19 91.3
MsaG003767 MtrunA17_Chr3g0106491 54.795 73 32 1 594 666 350 421 1.27e-18 90.1
MsaG003767 MtrunA17_Chr3g0106491 43.333 90 42 4 609 697 198 279 4.79e-11 66.2
MsaG003767 MtrunA17_Chr7g0270191 41.905 105 48 3 594 697 130 222 1.63e-18 87.0
MsaG003767 MtrunA17_Chr3g0110191 26.131 398 212 18 73 433 91 443 1.66e-18 89.4
MsaG003767 MtrunA17_Chr3g0099901 27.586 377 228 14 66 428 140 485 1.81e-18 89.7
MsaG003767 MtrunA17_Chr4g0023351 30.677 251 137 12 69 303 59 288 2.70e-18 86.7
MsaG003767 MtrunA17_Chr6g0457401 25.301 415 261 18 35 429 52 437 4.48e-18 88.2
MsaG003767 MtrunA17_Chr2g0309561 22.146 438 264 14 45 428 94 508 9.29e-18 87.4
MsaG003767 MtrunA17_Chr8g0335811 48.718 78 39 1 594 671 139 215 2.37e-17 82.0
MsaG003767 MtrunA17_Chr3g0129321 48.000 75 38 1 592 666 101 174 2.47e-17 81.6
MsaG003767 MtrunA17_Chr4g0051881 43.810 105 51 4 596 700 165 261 3.04e-17 84.3
MsaG003767 MtrunA17_Chr1g0164401 25.806 372 230 17 69 429 93 429 5.08e-17 84.7
MsaG003767 MtrunA17_Chr6g0487471 24.156 385 236 15 67 429 85 435 5.22e-17 84.7
MsaG003767 MtrunA17_Chr7g0263531 51.351 74 35 1 593 666 345 417 5.31e-17 84.7
MsaG003767 MtrunA17_Chr1g0194481 49.315 73 36 1 594 666 143 214 1.15e-16 82.4
MsaG003767 MtrunA17_Chr4g0068541 48.684 76 37 2 596 670 195 269 1.26e-16 83.2
MsaG003767 MtrunA17_Chr5g0447701 45.333 75 40 1 594 668 237 310 1.84e-16 82.4
MsaG003767 MtrunA17_Chr1g0188941 49.315 73 36 1 594 666 36 107 3.53e-16 75.5
MsaG003767 MtrunA17_Chr2g0294231 47.059 85 43 2 594 678 188 270 6.14e-16 80.9
MsaG003767 MtrunA17_Chr7g0224801 52.113 71 29 2 598 666 82 149 9.80e-16 75.9
MsaG003767 MtrunA17_Chr4g0061641 26.536 358 215 15 87 429 73 397 1.13e-15 80.1
MsaG003767 MtrunA17_Chr2g0287841 23.058 399 235 15 62 415 57 428 1.63e-15 80.1
MsaG003767 MtrunA17_Chr7g0248721 47.887 71 35 1 596 666 128 196 1.79e-15 76.6
MsaG003767 MtrunA17_Chr3g0112051 27.215 316 180 14 73 363 78 368 2.26e-15 79.7
MsaG003767 MtrunA17_Chr4g0056211 25.598 418 235 18 69 430 75 472 7.12e-15 78.2
MsaG003767 MtrunA17_Chr7g0238921 46.154 78 40 2 590 666 104 180 8.28e-15 76.6
MsaG003767 MtrunA17_Chr2g0287861 23.274 391 232 14 66 415 41 404 1.09e-14 77.4
MsaG003767 MtrunA17_Chr8g0386241 44.595 74 40 1 593 666 87 159 1.40e-14 72.8
MsaG003767 MtrunA17_Chr5g0418781 45.946 74 39 1 596 669 111 183 1.50e-14 75.1
MsaG003767 MtrunA17_Chr5g0443131 46.479 71 37 1 596 666 144 213 1.65e-14 75.5
MsaG003767 MtrunA17_Chr5g0434411 23.990 396 227 18 73 433 86 442 2.96e-14 76.3
MsaG003767 MtrunA17_Chr7g0239001 27.820 266 153 11 72 320 63 306 9.25e-14 74.7
MsaG003767 MtrunA17_Chr4g0074001 38.462 104 62 2 572 674 321 423 1.53e-13 74.3
MsaG003767 MtrunA17_Chr7g0270831 38.235 102 57 3 570 666 173 273 1.63e-13 73.9
MsaG003767 MtrunA17_Chr2g0322391 40.449 89 43 3 588 667 320 407 3.33e-13 73.6
MsaG003767 MtrunA17_Chr3g0139021 40.594 101 47 4 567 666 283 371 5.09e-13 72.0
MsaG003767 MtrunA17_Chr8g0348311 39.216 102 45 4 566 666 127 212 6.98e-13 70.9
MsaG003767 MtrunA17_Chr5g0430861 47.945 73 36 2 197 268 34 105 1.24e-12 65.1
MsaG003767 MtrunA17_Chr1g0147881 53.226 62 27 2 606 666 259 319 1.53e-12 70.1
MsaG003767 MtrunA17_Chr7g0228941 49.254 67 32 2 606 671 49 114 2.59e-12 64.7
MsaG003767 MtrunA17_Chr2g0284321 54.237 59 25 2 610 667 36 93 3.44e-12 67.0
MsaG003767 MtrunA17_Chr4g0075201 43.056 72 39 2 596 666 254 324 3.51e-12 69.7
MsaG003767 MtrunA17_Chr3g0099641 42.466 73 40 2 596 667 238 309 3.73e-12 69.7
MsaG003767 MtrunA17_Chr2g0302391 27.604 192 127 6 485 666 79 268 4.46e-12 69.3
MsaG003767 MtrunA17_Chr2g0288871 43.056 72 39 2 596 666 292 362 4.97e-12 69.7
MsaG003767 MtrunA17_Chr2g0333851 35.135 111 58 5 596 703 154 253 9.88e-12 67.0
MsaG003767 MtrunA17_Chr8g0387501 42.424 99 45 4 608 705 128 215 1.36e-11 66.2
MsaG003767 MtrunA17_Chr4g0025061 44.595 74 35 3 596 666 347 417 1.72e-11 68.2
MsaG003767 MtrunA17_Chr4g0071521 46.970 66 33 2 606 670 242 306 2.30e-11 66.2
MsaG003767 MtrunA17_Chr5g0401821 46.753 77 35 3 596 667 182 257 2.49e-11 65.5
MsaG003767 MtrunA17_Chr1g0184691 49.231 65 31 2 606 669 290 353 2.84e-11 66.2
MsaG003767 MtrunA17_Chr3g0126391 50.685 73 29 3 599 665 120 191 3.01e-11 65.9
MsaG003767 MtrunA17_Chr1g0150281 40.000 75 41 3 596 667 125 198 3.12e-11 65.1
MsaG003767 MtrunA17_Chr4g0053281 49.206 63 30 2 606 667 263 324 5.82e-11 65.1
MsaG003767 MtrunA17_Chr8g0352691 27.402 281 172 12 159 429 2 260 6.17e-11 63.9
MsaG003767 MtrunA17_Chr7g0270051 48.438 64 31 2 604 666 48 110 6.69e-11 63.9
MsaG003767 MtrunA17_Chr7g0248691 39.130 92 46 3 605 695 150 232 9.70e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG003767 AT1G05840.1 56.938 418 179 1 30 447 41 457 4.48e-172 508
MsaG003767 AT5G36260.1 54.167 408 183 3 31 438 40 443 3.99e-157 469
MsaG003767 AT3G02740.1 50.112 447 215 5 1 447 20 458 5.43e-149 448
MsaG003767 AT1G65240.1 51.059 425 200 5 31 455 36 452 4.78e-148 446
MsaG003767 AT3G02740.2 53.665 382 172 4 68 449 9 385 2.75e-138 418
MsaG003767 AT5G22850.1 41.289 419 230 6 31 439 39 451 3.56e-98 316
MsaG003767 AT2G36670.2 40.046 437 238 7 35 455 56 484 8.25e-96 310
MsaG003767 AT2G36670.1 39.593 442 238 8 35 455 56 489 1.41e-93 305
MsaG003767 AT2G36670.4 42.091 373 204 4 68 435 33 398 4.58e-91 295
MsaG003767 AT2G36670.3 42.091 373 204 4 68 435 33 398 4.58e-91 295
MsaG003767 AT1G08210.1 39.183 416 235 8 35 440 45 452 5.08e-86 284
MsaG003767 AT1G08210.4 39.183 416 235 8 35 440 79 486 7.99e-86 284
MsaG003767 AT1G08210.3 39.183 416 235 8 35 440 93 500 1.35e-85 284
MsaG003767 AT1G08210.2 37.215 438 240 9 35 440 45 479 3.02e-81 272
MsaG003767 AT4G33490.2 29.197 411 245 17 45 437 38 420 1.32e-34 138
MsaG003767 AT5G43100.2 29.474 380 216 16 67 429 74 418 2.22e-34 138
MsaG003767 AT5G43100.1 29.275 386 209 16 67 429 74 418 1.94e-33 137
MsaG003767 AT3G25700.1 28.861 395 237 14 60 429 75 450 2.06e-32 132
MsaG003767 AT2G17760.1 29.197 411 244 17 38 428 66 449 2.21e-32 133
MsaG003767 AT3G12700.1 27.229 415 249 15 39 429 76 461 1.39e-31 129
MsaG003767 AT3G50050.1 29.973 377 220 15 67 429 91 437 1.53e-31 132
MsaG003767 AT1G44130.1 26.768 396 245 15 51 429 33 400 2.89e-29 121
MsaG003767 AT1G49050.1 26.601 406 246 19 51 428 187 568 1.16e-27 119
MsaG003767 AT5G10080.1 26.133 375 243 13 68 428 99 453 7.25e-27 116
MsaG003767 AT4G33490.1 29.609 358 210 15 45 385 35 367 1.10e-26 114
MsaG003767 AT1G25510.1 25.858 379 237 13 60 428 139 483 2.54e-26 114
MsaG003767 AT3G51350.1 26.555 418 252 18 38 428 63 452 8.16e-26 113
MsaG003767 AT1G49050.2 25.964 389 238 18 68 428 29 395 5.75e-25 108
MsaG003767 AT2G23945.1 26.683 416 257 16 38 428 56 448 7.72e-25 109
MsaG003767 AT3G18490.1 26.190 378 240 14 60 428 153 500 6.15e-24 107
MsaG003767 AT3G54400.1 26.133 375 226 16 69 429 88 425 8.20e-24 105
MsaG003767 AT1G01300.1 27.670 412 222 19 45 429 123 485 1.17e-23 106
MsaG003767 AT3G59080.1 30.986 284 164 11 60 324 161 431 3.50e-23 105
MsaG003767 AT3G51340.2 26.150 413 254 15 38 428 64 447 3.70e-23 105
MsaG003767 AT5G10770.1 25.594 379 246 13 60 429 123 474 4.82e-23 103
MsaG003767 AT1G77480.2 27.901 405 243 18 44 428 44 419 7.31e-23 103
MsaG003767 AT1G77480.1 27.901 405 243 18 44 428 44 419 1.66e-22 102
MsaG003767 AT4G35880.1 25.789 380 229 19 68 428 106 451 1.79e-22 102
MsaG003767 AT1G49050.3 27.797 295 182 13 51 334 187 461 3.89e-22 101
MsaG003767 AT2G03200.1 26.972 393 219 18 66 428 104 458 4.88e-22 100
MsaG003767 AT1G64830.1 28.158 380 232 15 62 429 79 429 6.32e-22 100
MsaG003767 AT3G51330.1 27.885 416 250 18 38 428 63 453 1.81e-21 99.8
MsaG003767 AT3G51330.3 27.885 416 250 18 38 428 63 453 2.79e-21 98.6
MsaG003767 AT5G33340.1 26.121 379 243 13 62 429 83 435 3.14e-21 98.2
MsaG003767 AT1G31450.1 27.119 413 245 18 45 432 64 445 3.87e-21 97.8
MsaG003767 AT4G30040.1 25.269 372 232 12 69 423 85 427 5.04e-21 97.4
MsaG003767 AT1G64000.1 55.556 72 31 1 595 666 100 170 6.98e-21 92.0
MsaG003767 AT3G51360.1 25.178 421 256 15 34 428 48 435 7.07e-21 97.4
MsaG003767 AT3G51360.9 25.178 421 256 15 34 428 58 445 8.88e-21 97.4
MsaG003767 AT2G38470.1 41.538 130 70 3 539 666 293 418 3.43e-20 95.9
MsaG003767 AT2G35615.1 25.721 416 252 17 45 432 61 447 3.76e-20 95.1
MsaG003767 AT5G41570.1 54.930 71 31 1 596 666 85 154 5.61e-20 89.0
MsaG003767 AT3G51360.7 24.672 381 234 14 68 428 4 351 6.95e-20 93.6
MsaG003767 AT3G20015.1 26.893 383 232 16 60 428 122 470 7.03e-20 94.4
MsaG003767 AT5G64810.1 38.835 103 62 1 564 666 65 166 7.66e-20 89.0
MsaG003767 AT4G26640.7 54.795 73 32 1 594 666 326 397 8.37e-20 94.4
MsaG003767 AT3G51340.1 25.986 431 244 18 38 428 64 459 8.64e-20 94.7
MsaG003767 AT2G03340.1 37.324 142 80 3 527 666 337 471 9.70e-20 94.4
MsaG003767 AT4G26640.1 54.795 73 32 1 594 666 294 365 1.14e-19 94.0
MsaG003767 AT5G07100.1 52.381 84 32 2 594 670 219 301 1.17e-19 91.3
MsaG003767 AT4G26640.2 54.795 73 32 1 594 666 366 437 1.19e-19 94.4
MsaG003767 AT4G26640.5 54.795 73 32 1 594 666 190 261 1.31e-19 92.4
MsaG003767 AT4G26640.6 54.795 73 32 1 594 666 190 261 1.31e-19 92.4
MsaG003767 AT4G26640.4 54.795 73 32 1 594 666 190 261 1.31e-19 92.4
MsaG003767 AT4G26640.3 54.795 73 32 1 594 666 190 261 1.31e-19 92.4
MsaG003767 AT5G07100.2 52.381 84 32 2 594 670 126 208 1.34e-19 89.0
MsaG003767 AT5G07100.4 52.381 84 32 2 594 670 126 208 1.34e-19 89.0
MsaG003767 AT5G07100.5 52.381 84 32 2 594 670 126 208 1.34e-19 89.0
MsaG003767 AT5G07100.3 52.381 84 32 2 594 670 126 208 1.34e-19 89.0
MsaG003767 AT3G01080.2 53.947 76 34 1 591 666 326 400 1.61e-19 93.2
MsaG003767 AT3G61820.1 26.166 386 240 14 60 428 126 483 1.92e-19 93.2
MsaG003767 AT1G13960.1 53.947 76 34 1 591 666 391 465 1.94e-19 93.2
MsaG003767 AT3G01080.1 53.947 76 34 1 591 666 288 362 2.74e-19 92.0
MsaG003767 AT3G42550.1 32.749 171 98 4 286 444 240 405 3.82e-19 91.7
MsaG003767 AT3G42550.1 30.625 160 100 3 35 189 39 192 3.99e-19 91.7
MsaG003767 AT1G13960.2 53.947 76 34 1 591 666 238 312 5.50e-19 90.1
MsaG003767 AT3G52500.1 27.901 405 226 18 67 429 88 468 7.06e-19 91.3
MsaG003767 AT4G35880.2 27.273 319 187 17 68 368 106 397 7.84e-19 90.9
MsaG003767 AT2G28040.2 25.337 371 225 16 69 430 56 383 7.94e-19 90.1
MsaG003767 AT3G51340.3 27.622 286 182 9 38 306 64 341 1.06e-18 90.1
MsaG003767 AT4G26440.1 39.394 132 75 3 535 666 302 428 1.47e-18 90.9
MsaG003767 AT2G28040.1 25.337 371 225 16 69 430 65 392 1.49e-18 89.4
MsaG003767 AT5G56270.1 54.795 73 32 1 594 666 472 543 1.75e-18 90.9
MsaG003767 AT2G42980.1 27.295 403 232 17 60 429 151 525 2.13e-18 90.1
MsaG003767 AT5G45120.1 26.452 465 248 24 28 428 44 478 2.49e-18 89.7
MsaG003767 AT2G28010.1 24.462 372 230 12 68 430 64 393 3.53e-18 88.2
MsaG003767 AT3G51340.4 27.622 286 182 9 38 306 64 341 3.78e-18 88.2
MsaG003767 AT1G55600.1 52.632 76 35 1 591 666 289 363 5.08e-18 88.6
MsaG003767 AT1G79720.1 27.110 391 229 17 60 428 126 482 5.10e-18 88.6
MsaG003767 AT2G04880.2 38.017 121 74 1 546 666 220 339 5.19e-18 88.6
MsaG003767 AT2G04880.1 38.017 121 74 1 546 666 244 363 5.87e-18 88.6
MsaG003767 AT5G37540.1 24.289 387 230 15 73 428 84 438 5.89e-18 88.2
MsaG003767 AT2G46130.1 52.113 71 33 1 596 666 17 86 8.62e-18 80.1
MsaG003767 AT4G30030.1 25.337 371 237 13 69 428 78 419 1.24e-17 87.0
MsaG003767 AT2G44745.1 46.429 84 44 1 594 677 130 212 1.25e-17 83.2
MsaG003767 AT2G47260.1 49.315 73 36 1 594 666 159 230 3.06e-17 84.7
MsaG003767 AT5G26170.1 43.243 74 41 1 596 669 100 172 3.18e-17 80.9
MsaG003767 AT5G49520.1 52.055 73 34 1 594 666 206 277 4.27e-17 85.1
MsaG003767 AT3G51330.2 28.042 378 227 16 38 390 63 420 4.29e-17 85.5
MsaG003767 AT2G30250.1 52.055 73 34 1 594 666 313 384 4.76e-17 84.7
MsaG003767 AT1G29860.1 49.315 73 36 1 594 666 121 192 7.26e-17 82.4
MsaG003767 AT4G39410.1 49.333 75 37 1 594 668 208 281 7.81e-17 82.8
MsaG003767 AT1G66180.1 23.410 393 230 15 73 432 76 430 2.47e-16 82.8
MsaG003767 AT5G10760.1 25.321 312 196 11 60 363 123 405 3.11e-16 82.8
MsaG003767 AT4G18170.1 47.945 73 37 1 594 666 157 228 4.23e-16 80.9
MsaG003767 AT2G28030.1 23.200 375 231 16 68 430 60 389 1.93e-15 79.7
MsaG003767 AT3G62340.1 52.113 71 33 1 596 666 105 174 2.03e-15 78.2
MsaG003767 AT1G69310.4 47.887 71 36 1 596 666 134 203 2.74e-15 77.8
MsaG003767 AT1G69310.2 47.887 71 36 1 596 666 134 203 2.74e-15 77.8
MsaG003767 AT1G69310.1 47.887 71 36 1 596 666 134 203 2.74e-15 77.8
MsaG003767 AT2G46130.2 47.887 71 32 1 596 666 17 82 3.56e-15 72.8
MsaG003767 AT2G21900.1 51.562 64 29 2 604 666 103 165 3.78e-15 75.5
MsaG003767 AT5G13080.1 48.649 74 33 2 595 666 53 123 4.51e-15 73.6
MsaG003767 AT5G46350.1 43.038 79 43 2 596 674 170 246 4.62e-15 77.8
MsaG003767 AT5G07030.1 25.526 380 225 18 69 429 115 455 4.91e-15 79.0
MsaG003767 AT3G51360.10 24.940 417 248 16 34 418 48 431 7.66e-15 78.2
MsaG003767 AT3G01970.1 48.052 77 37 2 596 672 52 125 8.81e-15 72.8
MsaG003767 AT4G31550.2 37.903 124 58 5 564 686 211 316 8.82e-15 77.0
MsaG003767 AT3G51360.6 24.940 417 248 16 34 418 58 441 1.01e-14 78.2
MsaG003767 AT3G51360.5 25.348 359 217 13 34 369 58 388 2.74e-14 76.6
MsaG003767 AT3G51360.4 25.348 359 217 13 34 369 48 378 3.64e-14 75.9
MsaG003767 AT2G39710.1 25.857 321 181 16 73 363 69 362 4.47e-14 75.9
MsaG003767 AT2G28225.1 22.487 378 234 14 68 430 66 399 7.27e-14 75.1
MsaG003767 AT3G59080.2 26.335 281 145 8 60 324 161 395 1.01e-13 75.1
MsaG003767 AT3G51360.2 26.667 285 183 9 34 304 58 330 2.06e-13 73.2
MsaG003767 AT4G31550.1 37.600 125 58 6 564 686 211 317 2.96e-13 72.4
MsaG003767 AT2G28220.1 22.302 417 260 16 27 430 34 399 3.22e-13 73.2
MsaG003767 AT1G69310.3 43.662 71 35 1 596 666 134 199 3.35e-13 71.6
MsaG003767 AT4G30935.1 39.252 107 55 3 572 674 295 395 3.41e-13 73.6
MsaG003767 AT4G23550.1 43.243 74 40 2 594 666 125 197 7.39e-13 70.9
MsaG003767 AT2G37260.1 49.206 63 31 1 604 666 344 405 7.89e-13 72.0
MsaG003767 AT2G37260.3 49.206 63 31 1 604 666 264 325 9.40e-13 71.2
MsaG003767 AT2G37260.2 49.206 63 31 1 604 666 262 323 9.94e-13 70.9
MsaG003767 AT4G01250.1 41.000 100 43 4 568 666 101 185 1.06e-12 70.5
MsaG003767 AT5G52830.1 38.532 109 59 3 594 701 150 251 1.19e-12 70.9
MsaG003767 AT2G46400.1 41.667 84 45 2 596 676 91 173 1.21e-12 70.1
MsaG003767 AT1G29280.1 43.011 93 48 3 575 666 43 131 1.95e-12 68.9
MsaG003767 AT4G04450.2 44.444 72 38 2 596 666 185 255 3.91e-12 69.7
MsaG003767 AT2G23320.1 43.750 80 39 3 593 667 220 298 4.03e-12 68.9
MsaG003767 AT2G25000.2 47.619 63 30 3 608 668 102 163 8.38e-12 66.2
MsaG003767 AT2G25000.4 47.619 63 30 3 608 668 102 163 8.38e-12 66.2
MsaG003767 AT4G24240.1 44.444 81 39 3 596 671 264 343 8.58e-12 68.2
MsaG003767 AT4G04450.1 44.444 72 38 2 596 666 279 349 1.28e-11 68.6
MsaG003767 AT5G02190.1 22.821 390 239 16 78 431 82 445 1.33e-11 68.2
MsaG003767 AT2G25000.3 47.619 63 30 3 608 668 124 185 1.54e-11 65.9
MsaG003767 AT5G43290.1 43.056 72 39 2 596 666 100 170 1.85e-11 66.2
MsaG003767 AT4G22070.4 43.056 72 39 2 596 666 284 354 1.92e-11 68.2
MsaG003767 AT4G22070.3 43.056 72 39 2 596 666 284 354 1.92e-11 68.2
MsaG003767 AT4G22070.2 43.056 72 39 2 596 666 284 354 1.92e-11 68.2
MsaG003767 AT4G22070.1 43.056 72 39 2 596 666 284 354 1.92e-11 68.2
MsaG003767 AT2G25000.1 47.619 63 30 3 608 668 145 206 2.16e-11 65.9
MsaG003767 AT2G24570.1 40.000 105 49 5 564 666 208 300 2.53e-11 66.6
MsaG003767 AT1G62300.1 43.056 72 39 2 596 666 299 369 3.09e-11 67.4
MsaG003767 AT5G15130.2 43.056 72 39 2 596 666 172 242 3.17e-11 67.4
MsaG003767 AT4G01720.1 44.444 72 38 2 596 666 226 296 3.72e-11 67.0
MsaG003767 AT5G15130.1 43.056 72 39 2 596 666 214 284 4.56e-11 67.0

Find 231 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTCAAGTCTTTCCTTTCA+TGG 0.213204 1:+61668885 MsaT003767.1:CDS
TGAAAGCGATGAAGACATTT+TGG 0.213822 1:+61667383 MsaT003767.1:CDS
ATCAGTTGTACTATCTTCTT+TGG 0.230642 1:-61667030 None:intergenic
AATGGAGTTGTTCTGACTTT+TGG 0.238222 1:-61650490 None:intergenic
GATTAATGAACATACATATT+TGG 0.242714 1:-61650517 None:intergenic
GAAGCCCTTGATGGAATAAT+TGG 0.245572 1:+61650340 MsaT003767.1:CDS
TGGACATAGTAGTCCTTCTT+TGG 0.254367 1:-61649467 None:intergenic
CCCTCGGATATATTTGATTC+TGG 0.259620 1:+61652454 MsaT003767.1:CDS
AATAATTACCTACGATTGTT+AGG 0.259815 1:-61667456 None:intergenic
TGTCCTTTCCATCCTTAGTT+TGG 0.271260 1:-61654104 None:intergenic
GGAATTGGCCCGTTGATATT+TGG 0.273233 1:-61668601 None:intergenic
GATATATTTGATTCTGGAAA+TGG 0.285563 1:+61652460 MsaT003767.1:CDS
TCATCCGTTGATTTCAATCT+TGG 0.285586 1:+61647818 MsaT003767.1:CDS
TGACTATCTGTTCCAATATA+AGG 0.288332 1:+61653630 MsaT003767.1:CDS
CTTGATGGAATAATTGGTTT+TGG 0.295754 1:+61650346 MsaT003767.1:CDS
CTTGTACGATCTTGAGAATA+TGG 0.302586 1:+61657311 MsaT003767.1:CDS
TCTCCATAAGTTATGCTATA+GGG 0.307360 1:-61649818 None:intergenic
CTTCACGATAAAGCTGGTTT+TGG 0.308160 1:-61647329 None:intergenic
GTCCTTTCCATCCTTAGTTT+GGG 0.310111 1:-61654103 None:intergenic
TATGTAACAAGTACATATTT+TGG 0.310515 1:-61668253 None:intergenic
CCAACTTGAGTTGTGGTAAT+AGG 0.312353 1:-61668742 None:intergenic
GAAATTGACCCATTGATATT+AGG 0.316173 1:-61668766 None:intergenic
TTTCTTCAGGTTGGTGGAAA+TGG 0.328210 1:+61668853 MsaT003767.1:CDS
ACATATGATGGTCCGATTCC+TGG 0.332528 1:+61649773 MsaT003767.1:CDS
AAAGGCCGCGTCATGGTATT+AGG 0.337576 1:-61668472 None:intergenic
TTACCTACCATGTTTAATAA+AGG 0.338840 1:-61668490 None:intergenic
ATGCGAGCTAATTTCAATTC+AGG 0.348914 1:-61652646 None:intergenic
GGAAAGGACATGACACTTCT+TGG 0.353144 1:+61654117 MsaT003767.1:CDS
AAGTTCATACCACCTTATAT+TGG 0.354647 1:-61653642 None:intergenic
GGGTGCTTCCCCAGCTGATC+AGG 0.355314 1:+61668906 MsaT003767.1:CDS
CAAATACCTTTGGAATTAGT+TGG 0.360512 1:-61652543 None:intergenic
AATGGTCTTCCTACTAGAAC+TGG 0.364096 1:+61647845 MsaT003767.1:CDS
GTCCTTGATCAGGTGGTGTT+GGG 0.367401 1:-61666887 None:intergenic
AACTCCTATTGATACAAATC+AGG 0.367991 1:+61668573 MsaT003767.1:CDS
ATACCTTATGGTATGAATTA+CGG 0.368502 1:+61668445 MsaT003767.1:CDS
CAATATGGCTATATACCTTA+TGG 0.368992 1:+61668433 MsaT003767.1:CDS
CATAAGGTATATAGCCATAT+TGG 0.374743 1:-61668432 None:intergenic
GCTCAAGTCTTTCCTTTCAT+GGG 0.380582 1:+61668886 MsaT003767.1:CDS
TCGAGAAATATTAATGCATC+TGG 0.384031 1:+61668328 MsaT003767.1:CDS
GGAAATACAGGAAGCGGAAT+TGG 0.386630 1:-61668616 None:intergenic
AATATTTGCCATAGGGGAAT+TGG 0.388793 1:+61650462 MsaT003767.1:CDS
TATTCCATCAAGGGCTTCTT+CGG 0.390964 1:-61650335 None:intergenic
AATGCATACATACACCGATT+TGG 0.391207 1:-61649556 None:intergenic
CCTAAATATCATTCGGTGTC+AGG 0.391994 1:-61668943 None:intergenic
TGCAATTCAGGAAGAGAAAG+AGG 0.396225 1:+61667292 MsaT003767.1:intron
CCATTTCACATTGTACCATA+TGG 0.401565 1:+61668823 MsaT003767.1:CDS
TATGTACTTGTTACATATGA+TGG 0.402941 1:+61668259 MsaT003767.1:CDS
TAGGCTGGTGTCCGATGTAT+TGG 0.403880 1:+61654063 MsaT003767.1:intron
TGCCCCTATAGCATAACTTA+TGG 0.404144 1:+61649815 MsaT003767.1:CDS
CCAACTTGAGTTGCAGTCAT+AGG 0.404757 1:-61668664 None:intergenic
AGGTTGTATTTCACTAAACT+TGG 0.408327 1:+61649434 MsaT003767.1:intron
TGTTCACTTATGGGTCTGTA+AGG 0.409849 1:-61668526 None:intergenic
TCTGCACCATGTCCTTGATC+AGG 0.410286 1:-61666897 None:intergenic
TCAAAATGTAGTTTGACAAC+TGG 0.411155 1:-61653577 None:intergenic
GATCTTGAGAATATGGCTAT+TGG 0.412629 1:+61657318 MsaT003767.1:CDS
CAAGTTGGACATAGTATCAA+TGG 0.415666 1:+61668679 MsaT003767.1:CDS
TATTTCACTAAACTTGGGCT+TGG 0.419254 1:+61649440 MsaT003767.1:CDS
GGTGGTAATAGTGGTGATAT+CGG 0.419782 1:-61668802 None:intergenic
TTGAAGAATATTGAAGTTGA+TGG 0.419885 1:+61652415 MsaT003767.1:CDS
CAAGTTGGACCTAATATCAA+TGG 0.424174 1:+61668757 MsaT003767.1:CDS
ATAGGAAATGGTGGTGATAT+CGG 0.424915 1:-61668724 None:intergenic
TCTGAAGTATGAGATCCCTT+TGG 0.425665 1:-61649716 None:intergenic
CCAACCTGATTTGTATCAAT+AGG 0.427285 1:-61668577 None:intergenic
GGTGGTAATGGTGGTGATAT+CGG 0.428089 1:-61668637 None:intergenic
AAGTGATTATAAAACCTTTG+TGG 0.432121 1:-61667176 None:intergenic
GATTTCAATCTTGGTGGTAA+TGG 0.434766 1:+61647827 MsaT003767.1:CDS
TCTTCCGAAGAAGCCCTTGA+TGG 0.436173 1:+61650331 MsaT003767.1:CDS
CTGAAGTATGAGATCCCTTT+GGG 0.444221 1:-61649715 None:intergenic
TGCATCCTTCACTTTAATGC+TGG 0.446229 1:-61657774 None:intergenic
ATCTCCATAAGTTATGCTAT+AGG 0.446865 1:-61649819 None:intergenic
TCTGTAGCTTCCTGATCAGC+TGG 0.448536 1:-61668916 None:intergenic
ATAAGTTATGCTATAGGGGC+AGG 0.450756 1:-61649813 None:intergenic
CATCTCCTCTTGTTGCCACA+TGG 0.452151 1:-61666812 None:intergenic
CAACTACTGGATACTATGTC+AGG 0.454687 1:+61649849 MsaT003767.1:CDS
GGTGGTGATATCGGAAATAC+AGG 0.454748 1:-61668628 None:intergenic
GGTGGTGATATCGGAAATAC+AGG 0.454748 1:-61668715 None:intergenic
AGTGGTGATATCGGAAATAC+AGG 0.457187 1:-61668793 None:intergenic
ATATATTTGATTCTGGAAAT+GGG 0.463580 1:+61652461 MsaT003767.1:CDS
TCCGTTGATTTCAATCTTGG+TGG 0.470108 1:+61647821 MsaT003767.1:CDS
TTGTAACCTTGCAGTGTTGA+TGG 0.473520 1:+61653547 MsaT003767.1:intron
TGAGTTGCAGTCATAGGAAA+TGG 0.474839 1:-61668658 None:intergenic
TACTATGTCCAAGTTGATAC+AGG 0.477388 1:+61649479 MsaT003767.1:CDS
ACTGCTTCAGAAAAGTTCAT+TGG 0.480463 1:-61667002 None:intergenic
CAACCGTAATTCATACCATA+AGG 0.481218 1:-61668448 None:intergenic
CCTATGACTGCAACTCAAGT+TGG 0.482132 1:+61668664 MsaT003767.1:CDS
TGTCCTTGATCAGGTGGTGT+TGG 0.482577 1:-61666888 None:intergenic
ATATAGCCATATTGGTGAAA+AGG 0.483202 1:-61668424 None:intergenic
CCTATTACCACAACTCAAGT+TGG 0.484916 1:+61668742 MsaT003767.1:CDS
TCCGCCTTACAACCAGGAAT+CGG 0.485297 1:-61649785 None:intergenic
TGGTTCCACCAATTCCCCTA+TGG 0.487442 1:-61650470 None:intergenic
ACCACCATCTGCATTGCCTA+TGG 0.489573 1:+61668387 MsaT003767.1:CDS
GCTGTACAATCTGGCACATT+GGG 0.492450 1:+61650304 MsaT003767.1:CDS
TGAAGAAAATCCCCACCATA+TGG 0.492962 1:-61668838 None:intergenic
CAATTACTTCACGATAAAGC+TGG 0.497836 1:-61647335 None:intergenic
CACTGCCTTGACAATATTCG+TGG 0.504030 1:+61650433 MsaT003767.1:CDS
TTAATATTTCTCGAGTATGT+TGG 0.504174 1:-61668319 None:intergenic
TGTCCTACGAAAAGCCAAAT+CGG 0.504507 1:+61649542 MsaT003767.1:CDS
CAAAACCAATTATTCCATCA+AGG 0.505616 1:-61650345 None:intergenic
CGCTGTACAATCTGGCACAT+TGG 0.507679 1:+61650303 MsaT003767.1:CDS
AAAGTGAAGGATGCAACGAC+TGG 0.508416 1:+61657782 MsaT003767.1:CDS
GATGATGAAGCAACTGCCAT+TGG 0.509238 1:+61667104 MsaT003767.1:CDS
TATGTAGCCTAAATATCATT+CGG 0.509419 1:-61668950 None:intergenic
AGGTTGGACCAAATATCAAC+GGG 0.512849 1:+61668593 MsaT003767.1:CDS
GAGACTCACCCAGTTCTAGT+AGG 0.514151 1:-61647854 None:intergenic
ATTTGCCATAGGGGAATTGG+TGG 0.515298 1:+61650465 MsaT003767.1:CDS
TGGTCCGATTCCTGGTTGTA+AGG 0.515945 1:+61649781 MsaT003767.1:CDS
TAATTTCAATTCAGGCTGAC+GGG 0.516305 1:-61652638 None:intergenic
TATAGCATAACTTATGGAGA+TGG 0.523472 1:+61649821 MsaT003767.1:CDS
CGTCGGAAAACGAGTTTAAG+TGG 0.524546 1:+61647755 MsaT003767.1:CDS
GGTTGTATTTCACTAAACTT+GGG 0.524940 1:+61649435 MsaT003767.1:intron
GGAGATGGAAGTGCAACTAC+TGG 0.525159 1:+61649836 MsaT003767.1:CDS
TTCACATTGTACCATATGGT+GGG 0.526608 1:+61668827 MsaT003767.1:CDS
CCATATGGTACAATGTGAAA+TGG 0.527122 1:-61668823 None:intergenic
GCTGGGGAAGCACCCATGAA+AGG 0.527399 1:-61668898 None:intergenic
AGTTGGTCATAGACTATGAC+AGG 0.528228 1:-61652526 None:intergenic
AAAACCAATTATTCCATCAA+GGG 0.529475 1:-61650344 None:intergenic
TATGGAGATTTCCGTTGATC+CGG 0.531316 1:-61649889 None:intergenic
TGAGTTGTGGTAATAGGAAA+TGG 0.532382 1:-61668736 None:intergenic
ATGTGAAATGGTGGTAATAG+TGG 0.532968 1:-61668811 None:intergenic
ATGCTGAAATTCTAAGGGCT+AGG 0.533181 1:+61666967 MsaT003767.1:CDS
AAGGGCACAGTGATTGATAG+TGG 0.533492 1:+61652484 MsaT003767.1:CDS
GGTGGTGGAATATTTGCCAT+AGG 0.534159 1:+61650454 MsaT003767.1:CDS
TGGGCTTGGCTCTCCAAAGA+AGG 0.534533 1:+61649454 MsaT003767.1:CDS
GTGGTGGAATATTTGCCATA+GGG 0.535995 1:+61650455 MsaT003767.1:CDS
TTTGATTCTGGAAATGGGAA+GGG 0.536848 1:+61652466 MsaT003767.1:CDS
GAAAAGTGTGACCCAAACTA+AGG 0.537843 1:+61654092 MsaT003767.1:CDS
TCCCCAACACCACCTGATCA+AGG 0.540123 1:+61666885 MsaT003767.1:CDS
CTCCATAAGTTATGCTATAG+GGG 0.541427 1:-61649817 None:intergenic
TATGATGATGGTGGTGCTAG+TGG 0.544707 1:+61667146 MsaT003767.1:CDS
TCGACATCTGTCATGGGGCA+AGG 0.545512 1:-61667339 None:intergenic
GATTGATAGTGGAACAACCT+TGG 0.548951 1:+61652495 MsaT003767.1:CDS
CTAATTTCAATTCAGGCTGA+CGG 0.548990 1:-61652639 None:intergenic
GGAGGGAGAGGGTGAACCAT+AGG 0.549300 1:-61668403 None:intergenic
AAGTTGGACCTAATATCAAT+GGG 0.549912 1:+61668758 MsaT003767.1:CDS
ATTTGATTCTGGAAATGGGA+AGG 0.551449 1:+61652465 MsaT003767.1:CDS
GTCATAGGAAATGGTGGTAA+TGG 0.551917 1:-61668649 None:intergenic
GATGAAGCAACTGCCATTGG+AGG 0.552119 1:+61667107 MsaT003767.1:CDS
GGTTATTGTTGGCGCAAGTA+CGG 0.553147 1:+61667411 MsaT003767.1:CDS
TGGTGTTTCAGGTGCAGCGT+CGG 0.553360 1:+61647738 MsaT003767.1:intron
CTCTTCCAGCATTAAAGTGA+AGG 0.554484 1:+61657769 MsaT003767.1:CDS
CTGTAGCTTCCTGATCAGCT+GGG 0.555229 1:-61668915 None:intergenic
AAGTTGGACATAGTATCAAT+GGG 0.556046 1:+61668680 MsaT003767.1:CDS
ACAGCTTGCTGCATCTCGAA+AGG 0.556530 1:+61650393 MsaT003767.1:CDS
AAATTCTAAGGGCTAGGAAA+GGG 0.557406 1:+61666973 MsaT003767.1:CDS
AGTGTGACCCAAACTAAGGA+TGG 0.559654 1:+61654096 MsaT003767.1:CDS
TCACATTGTACCATATGGTG+GGG 0.559672 1:+61668828 MsaT003767.1:CDS
TGTCTTCATCGCTTTCAACT+CGG 0.560449 1:-61667377 None:intergenic
GGTGTTTCCGCCTTACAACC+AGG 0.561933 1:-61649791 None:intergenic
TAACCTTGCAGTGTTGATGG+TGG 0.562260 1:+61653550 MsaT003767.1:intron
ACATACATATTTGGTACCAA+TGG 0.562501 1:-61650508 None:intergenic
GATATCGGAAATACAGGAAG+CGG 0.565608 1:-61668622 None:intergenic
CGAAATTTGAGTCCACTGAG+TGG 0.566394 1:+61647274 MsaT003767.1:CDS
TATCACTTCCTGTATCAACT+TGG 0.567282 1:-61649487 None:intergenic
TATTGGTGAAAAGGAGGGAG+AGG 0.567707 1:-61668415 None:intergenic
CAGCAACATCATTCCTCCAA+TGG 0.568839 1:-61667120 None:intergenic
TTTGTCAATGACAGGTCCGT+GGG 0.568911 1:-61668290 None:intergenic
AGGTGTGGCGCTGTACAATC+TGG 0.571318 1:+61650295 MsaT003767.1:intron
GAAATTCTAAGGGCTAGGAA+AGG 0.571481 1:+61666972 MsaT003767.1:CDS
ATGGCGTACTTTCCAGCATA+CGG 0.571746 1:-61652691 None:intergenic
TTTCACATTGTACCATATGG+TGG 0.572755 1:+61668826 MsaT003767.1:CDS
TTGAGAATATGGCTATTGGA+TGG 0.573054 1:+61657322 MsaT003767.1:CDS
GATATCGGAAATACAGGAAG+CGG 0.574632 1:-61668709 None:intergenic
CCTATTGATACAAATCAGGT+TGG 0.576330 1:+61668577 MsaT003767.1:CDS
GCAATTCAGGAAGAGAAAGA+GGG 0.576835 1:+61667293 MsaT003767.1:intron
TAGCCATATTGGTGAAAAGG+AGG 0.582097 1:-61668421 None:intergenic
TCCTTGATCAGGTGGTGTTG+GGG 0.585344 1:-61666886 None:intergenic
GTTTAATAAAGGCCGCGTCA+TGG 0.585854 1:-61668479 None:intergenic
AAAAGTCAGAACAACTCCAT+TGG 0.586123 1:+61650492 MsaT003767.1:CDS
GCAGTTGCTTCATCATCCGC+AGG 0.586772 1:-61667098 None:intergenic
GCAGATGGTGGTGATGGTGG+TGG 0.586837 1:-61668376 None:intergenic
CTTGACAATATTCGTGGTGG+TGG 0.588390 1:+61650439 MsaT003767.1:CDS
ATTAGGTCCAACTTGAGTTG+TGG 0.589594 1:-61668749 None:intergenic
CTTATGGTATGAATTACGGT+TGG 0.590836 1:+61668449 MsaT003767.1:CDS
TTGACTCTCTATGACCCAAA+GGG 0.594661 1:+61649701 MsaT003767.1:CDS
AGGAATCGGACCATCATATG+TGG 0.599832 1:-61649771 None:intergenic
AATGCAGATGGTGGTGATGG+TGG 0.599942 1:-61668379 None:intergenic
CAGGTTGGACCAAATATCAA+CGG 0.601960 1:+61668592 MsaT003767.1:CDS
CTGGTGTCCGATGTATTGGC+TGG 0.602129 1:+61654067 MsaT003767.1:CDS
AAGGACATGACACTTCTTGG+AGG 0.602130 1:+61654120 MsaT003767.1:CDS
GACCCAAACTAAGGATGGAA+AGG 0.607035 1:+61654101 MsaT003767.1:CDS
CCAGAATCAAATATATCCGA+GGG 0.608496 1:-61652454 None:intergenic
TACGGATGCAAAGAGATCAA+AGG 0.609552 1:+61667429 MsaT003767.1:CDS
ATTGAAATTAGCTCGCATTG+AGG 0.611001 1:+61652651 MsaT003767.1:CDS
TCCAGAATCAAATATATCCG+AGG 0.613600 1:-61652455 None:intergenic
GCACCATGTCCTTGATCAGG+TGG 0.613784 1:-61666894 None:intergenic
GAAATTTGAGTCCACTGAGT+GGG 0.614261 1:+61647275 MsaT003767.1:CDS
TCTGAAACTTGATCATCAGT+TGG 0.615285 1:-61667071 None:intergenic
AAGGAAATCCTAACAATCGT+AGG 0.617006 1:+61667448 MsaT003767.1:CDS
TTTGCTCGACATCTGTCATG+GGG 0.618862 1:-61667344 None:intergenic
GACGCGGCCTTTATTAAACA+TGG 0.620021 1:+61668483 MsaT003767.1:CDS
GGCAATGCAGATGGTGGTGA+TGG 0.620508 1:-61668382 None:intergenic
CGGCCTTTATTAAACATGGT+AGG 0.622617 1:+61668487 MsaT003767.1:CDS
TGATGTTCTACAGCTTCCCT+CGG 0.625997 1:+61652438 MsaT003767.1:CDS
ATGTTGCTGCAATATGATGA+TGG 0.628176 1:+61667134 MsaT003767.1:CDS
ATAGGAAATGGTGGTAATGG+TGG 0.629683 1:-61668646 None:intergenic
CTTGACTCTCTATGACCCAA+AGG 0.636415 1:+61649700 MsaT003767.1:CDS
TAAGTTATGCTATAGGGGCA+GGG 0.637715 1:-61649812 None:intergenic
CTATGACCAACTAATTCCAA+AGG 0.638550 1:+61652537 MsaT003767.1:CDS
ACCACCAAGATTGAAATCAA+CGG 0.639049 1:-61647822 None:intergenic
TGAACCATAGGCAATGCAGA+TGG 0.643972 1:-61668391 None:intergenic
TCCGATTCCTGGTTGTAAGG+CGG 0.644021 1:+61649784 MsaT003767.1:CDS
ATTGGTGAAAAGGAGGGAGA+GGG 0.644988 1:-61668414 None:intergenic
GATTGCCATGTGGCAACAAG+AGG 0.647237 1:+61666807 MsaT003767.1:CDS
CACCACCACGAATATTGTCA+AGG 0.649946 1:-61650438 None:intergenic
AACTACTGGATACTATGTCA+GGG 0.651961 1:+61649850 MsaT003767.1:CDS
TGGTGGAATATTTGCCATAG+GGG 0.652757 1:+61650456 MsaT003767.1:CDS
AGCCATATTGGTGAAAAGGA+GGG 0.654609 1:-61668420 None:intergenic
TATGATGGAAAACATACCCA+CGG 0.656713 1:+61668274 MsaT003767.1:CDS
GGGTCTGTAAGGTTGCATCA+TGG 0.657757 1:-61668515 None:intergenic
TATGACAGGAAGATAAGCCA+AGG 0.661057 1:-61652512 None:intergenic
GTTGTGGTAATAGGAAATGG+TGG 0.662787 1:-61668733 None:intergenic
GTTGCAGTCATAGGAAATGG+TGG 0.663032 1:-61668655 None:intergenic
ATGGTCTTCCTACTAGAACT+GGG 0.663957 1:+61647846 MsaT003767.1:CDS
TGTAGCTTCCTGATCAGCTG+GGG 0.667672 1:-61668914 None:intergenic
GCAAAATGATGCAAATGTAG+TGG 0.669148 1:+61666938 MsaT003767.1:CDS
TACAGGAAGTGATATTCTGT+GGG 0.670376 1:+61649496 MsaT003767.1:CDS
CTAGTGGATCTTGTCCACAA+AGG 0.681150 1:+61667162 MsaT003767.1:CDS
ATACAGGAAGTGATATTCTG+TGG 0.684061 1:+61649495 MsaT003767.1:CDS
ACATCTGTCATGGGGCAAGG+TGG 0.684322 1:-61667336 None:intergenic
GGGGATGAGAAATTCAACAC+TGG 0.684419 1:-61666867 None:intergenic
TTGTAGGGCACATTACAATG+TGG 0.689913 1:+61652390 MsaT003767.1:intron
TTCTGCTGATGATTGCCATG+TGG 0.692089 1:+61666797 MsaT003767.1:CDS
TATGGTACAATGTGAAATGG+TGG 0.694153 1:-61668820 None:intergenic
ACCATAGGCAATGCAGATGG+TGG 0.695874 1:-61668388 None:intergenic
TATTGGAACAGATAGTCATG+AGG 0.699625 1:-61653625 None:intergenic
ACACCACCTGATCAAGGACA+TGG 0.702867 1:+61666891 MsaT003767.1:CDS
TGCCTTGACAATATTCGTGG+TGG 0.718049 1:+61650436 MsaT003767.1:CDS
TTGCTGCAATATGATGATGG+TGG 0.726113 1:+61667137 MsaT003767.1:CDS
CATCACGATCATCTTCGTCG+TGG 0.733562 1:+61647785 MsaT003767.1:CDS
TCAAGTTTCAGATACACCTG+CGG 0.763156 1:+61667082 MsaT003767.1:CDS
GTTGGCCTAATACCATGACG+CGG 0.807585 1:+61668467 MsaT003767.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 61647265 61668957 61647265 ID=MsaG003767
Chr1 mRNA 61647265 61668957 61647265 ID=MsaT003767.1;Parent=MsaG003767
Chr1 exon 61647265 61647345 61647265 ID=MsaT003767.1.exon1;Parent=MsaT003767.1
Chr1 CDS 61647265 61647345 61647265 ID=cds.MsaT003767.1;Parent=MsaT003767.1
Chr1 exon 61647749 61647867 61647749 ID=MsaT003767.1.exon2;Parent=MsaT003767.1
Chr1 CDS 61647749 61647867 61647749 ID=cds.MsaT003767.1;Parent=MsaT003767.1
Chr1 exon 61649436 61649565 61649436 ID=MsaT003767.1.exon3;Parent=MsaT003767.1
Chr1 CDS 61649436 61649565 61649436 ID=cds.MsaT003767.1;Parent=MsaT003767.1
Chr1 exon 61649695 61649942 61649695 ID=MsaT003767.1.exon4;Parent=MsaT003767.1
Chr1 CDS 61649695 61649942 61649695 ID=cds.MsaT003767.1;Parent=MsaT003767.1
Chr1 exon 61650297 61650524 61650297 ID=MsaT003767.1.exon5;Parent=MsaT003767.1
Chr1 CDS 61650297 61650524 61650297 ID=cds.MsaT003767.1;Parent=MsaT003767.1
Chr1 exon 61652396 61652558 61652396 ID=MsaT003767.1.exon6;Parent=MsaT003767.1
Chr1 CDS 61652396 61652558 61652396 ID=cds.MsaT003767.1;Parent=MsaT003767.1
Chr1 exon 61652631 61652704 61652631 ID=MsaT003767.1.exon7;Parent=MsaT003767.1
Chr1 CDS 61652631 61652704 61652631 ID=cds.MsaT003767.1;Parent=MsaT003767.1
Chr1 exon 61653561 61653651 61653561 ID=MsaT003767.1.exon8;Parent=MsaT003767.1
Chr1 CDS 61653561 61653651 61653561 ID=cds.MsaT003767.1;Parent=MsaT003767.1
Chr1 exon 61654066 61654141 61654066 ID=MsaT003767.1.exon9;Parent=MsaT003767.1
Chr1 CDS 61654066 61654141 61654066 ID=cds.MsaT003767.1;Parent=MsaT003767.1
Chr1 exon 61657286 61657357 61657286 ID=MsaT003767.1.exon10;Parent=MsaT003767.1
Chr1 CDS 61657286 61657357 61657286 ID=cds.MsaT003767.1;Parent=MsaT003767.1
Chr1 exon 61657768 61657817 61657768 ID=MsaT003767.1.exon11;Parent=MsaT003767.1
Chr1 CDS 61657768 61657817 61657768 ID=cds.MsaT003767.1;Parent=MsaT003767.1
Chr1 exon 61666795 61667183 61666795 ID=MsaT003767.1.exon12;Parent=MsaT003767.1
Chr1 CDS 61666795 61667183 61666795 ID=cds.MsaT003767.1;Parent=MsaT003767.1
Chr1 exon 61667302 61667469 61667302 ID=MsaT003767.1.exon13;Parent=MsaT003767.1
Chr1 CDS 61667302 61667469 61667302 ID=cds.MsaT003767.1;Parent=MsaT003767.1
Chr1 exon 61668186 61668957 61668186 ID=MsaT003767.1.exon14;Parent=MsaT003767.1
Chr1 CDS 61668186 61668957 61668186 ID=cds.MsaT003767.1;Parent=MsaT003767.1
Gene Sequence

>MsaT003767.1

ATGATAGATCGAAATTTGAGTCCACTGAGTGGGCAAAAGCAGCAAAAAGTTATCGACATTTTAACCAAAACCAGCTTTATCGTGCAGCGTCGGAAAACGAGTTTAAGTGGAATTAAACATCACGATCATCTTCGTCGTGGTAGATTTCTTTCATCCGTTGATTTCAATCTTGGTGGTAATGGTCTTCCTACTAGAACTGGGTTGTATTTCACTAAACTTGGGCTTGGCTCTCCAAAGAAGGACTACTATGTCCAAGTTGATACAGGAAGTGATATTCTGTGGGTGAATTGTGTTGAGTGCTCAAGATGTCCTACGAAAAGCCAAATCGGTATGGACTTGACTCTCTATGACCCAAAGGGATCTCATACTTCAGAGTTAATTTCTTGTGATCATGAGTTTTGCTCTTCCACATATGATGGTCCGATTCCTGGTTGTAAGGCGGAAACACCCTGCCCCTATAGCATAACTTATGGAGATGGAAGTGCAACTACTGGATACTATGTCAGGGACTATCTTACTTTTGACCGGATCAACGGAAATCTCCATACCGCACCGCAAAATAGCAGCATCATTTTTGGGTGTGGCGCTGTACAATCTGGCACATTGGGTGCATCTTCCGAAGAAGCCCTTGATGGAATAATTGGTTTTGGACAGGAAAATTCTTCTGTGCTTTCACAGCTTGCTGCATCTCGAAAGGTGAAAAAAATATTTTCACACTGCCTTGACAATATTCGTGGTGGTGGAATATTTGCCATAGGGGAATTGGTGGAACCAAAAGTCAGAACAACTCCATTGGTACCAAATATGGCACATTACAATGTGGTTTTGAAGAATATTGAAGTTGATGGTGATGTTCTACAGCTTCCCTCGGATATATTTGATTCTGGAAATGGGAAGGGCACAGTGATTGATAGTGGAACAACCTTGGCTTATCTTCCTGTCATAGTCTATGACCAACTAATTCCAAAGATTTTTGCCCGTCAGCCTGAATTGAAATTAGCTCGCATTGAGGAACAATTTAAATGTTTTCCGTATGCTGGAAATGTTGATGGTGGATTTCCAGTTGTCAAACTACATTTTGAGGGTTCTCTTTCTCTGACAGTTTATCCTCATGACTATCTGTTCCAATATAAGGCTGGTGTCCGATGTATTGGCTGGCAGAAAAGTGTGACCCAAACTAAGGATGGAAAGGACATGACACTTCTTGGAGATTTGGTACTTTCAAACAAACTTGTCTTGTACGATCTTGAGAATATGGCTATTGGATGGACTGAATACAATTGCTCTTCCAGCATTAAAGTGAAGGATGCAACGACTGGAATAGTACATACAGCTTCTGCTGATGATTGCCATGTGGCAACAAGAGGAGATGCAAAACTTCAAGCTGAAACTGAAGTTCAACAACCAGTGTTGAATTTCTCATCCCCAACACCACCTGATCAAGGACATGGTGCAGAAGAAGAACAAGACCATGTGCAAAATGATGCAAATGTAGTGGTGAAAAATGCTGAAATTCTAAGGGCTAGGAAAGGGAAGATGCCAATGAACTTTTCTGAAGCAGTGCATGCCAAAGAAGATAGTACAACTGATGATAAAGAAACAAATGTACCAACTGATGATCAAGTTTCAGATACACCTGCGGATGATGAAGCAACTGCCATTGGAGGAATGATGTTGCTGCAATATGATGATGGTGGTGCTAGTGGATCTTGTCCACAAAGGAAGAGAAAGAGGGACTTCTCTGAATACTATAAACCACCTTGCCCCATGACAGATGTCGAGCAAAAAATAGTGATCCGAGTTGAAAGCGATGAAGACATTTTGGATGATGGTTATTGTTGGCGCAAGTACGGATGCAAAGAGATCAAAGGAAATCCTAACAATCGTAGGGGGTACTACAGATGCGCAACACACAATTGTGACATTAAAAAACAAGTGGAAAGGGATGCTAAAGATCCAAAATATGTACTTGTTACATATGATGGAAAACATACCCACGGACCTGTCATTGACAAAAAAAGACCAACATACTCGAGAAATATTAATGCATCTGGAGTTCGTAGAAATGCTAACATGCTGCCACCACCATCACCACCATCTGCATTGCCTATGGTTCACCCTCTCCCTCCTTTTCACCAATATGGCTATATACCTTATGGTATGAATTACGGTTGGCCTAATACCATGACGCGGCCTTTATTAAACATGGTAGGTAACACCATGATGCAACCTTACAGACCCATAAGTGAACAAAATTTTCTAGAACATCGTGCTTCAACTCCTATTGATACAAATCAGGTTGGACCAAATATCAACGGGCCAATTCCGCTTCCTGTATTTCCGATATCACCACCATTACCACCATTTCCTATGACTGCAACTCAAGTTGGACATAGTATCAATGGGTCAGTTCCGCTTCCTGTATTTCCGATATCACCACCATTTCCTATTACCACAACTCAAGTTGGACCTAATATCAATGGGTCAATTTCACTTCCTGTATTTCCGATATCACCACTATTACCACCATTTCACATTGTACCATATGGTGGGGATTTTCTTCAGGTTGGTGGAAATGGTATTGTTGCTGCTCAAGTCTTTCCTTTCATGGGTGCTTCCCCAGCTGATCAGGAAGCTACAGATGTTCCTGACACCGAATGA

Protein sequence

>MsaT003767.1

MIDRNLSPLSGQKQQKVIDILTKTSFIVQRRKTSLSGIKHHDHLRRGRFLSSVDFNLGGNGLPTRTGLYFTKLGLGSPKKDYYVQVDTGSDILWVNCVECSRCPTKSQIGMDLTLYDPKGSHTSELISCDHEFCSSTYDGPIPGCKAETPCPYSITYGDGSATTGYYVRDYLTFDRINGNLHTAPQNSSIIFGCGAVQSGTLGASSEEALDGIIGFGQENSSVLSQLAASRKVKKIFSHCLDNIRGGGIFAIGELVEPKVRTTPLVPNMAHYNVVLKNIEVDGDVLQLPSDIFDSGNGKGTVIDSGTTLAYLPVIVYDQLIPKIFARQPELKLARIEEQFKCFPYAGNVDGGFPVVKLHFEGSLSLTVYPHDYLFQYKAGVRCIGWQKSVTQTKDGKDMTLLGDLVLSNKLVLYDLENMAIGWTEYNCSSSIKVKDATTGIVHTASADDCHVATRGDAKLQAETEVQQPVLNFSSPTPPDQGHGAEEEQDHVQNDANVVVKNAEILRARKGKMPMNFSEAVHAKEDSTTDDKETNVPTDDQVSDTPADDEATAIGGMMLLQYDDGGASGSCPQRKRKRDFSEYYKPPCPMTDVEQKIVIRVESDEDILDDGYCWRKYGCKEIKGNPNNRRGYYRCATHNCDIKKQVERDAKDPKYVLVTYDGKHTHGPVIDKKRPTYSRNINASGVRRNANMLPPPSPPSALPMVHPLPPFHQYGYIPYGMNYGWPNTMTRPLLNMVGNTMMQPYRPISEQNFLEHRASTPIDTNQVGPNINGPIPLPVFPISPPLPPFPMTATQVGHSINGSVPLPVFPISPPFPITTTQVGPNINGSISLPVFPISPLLPPFHIVPYGGDFLQVGGNGIVAAQVFPFMGASPADQEATDVPDTE*