AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG003837

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG003837 MtrunA17_Chr1g0190381 96.667 540 8 1 530 1059 4 543 0.0 1083
MsaG003837 MtrunA17_Chr1g0190391 82.496 577 45 5 9 529 222 798 0.0 843
MsaG003837 MtrunA17_Chr5g0393461 32.657 591 320 17 332 891 173 716 7.13e-76 269
MsaG003837 MtrunA17_Chr8g0384531 26.904 591 343 16 334 889 375 911 2.30e-52 200
MsaG003837 MtrunA17_Chr4g0040301 29.787 517 318 10 381 862 18 524 1.68e-50 191
MsaG003837 MtrunA17_Chr4g0066741 27.875 574 305 15 333 887 178 661 1.51e-46 181
MsaG003837 MtrunA17_Chr4g0017211 26.898 606 350 20 375 939 1472 2025 5.36e-45 177
MsaG003837 MtrunA17_Chr2g0286291 27.885 728 376 26 204 887 42 664 2.03e-44 175
MsaG003837 MtrunA17_Chr1g0183681 29.306 447 243 10 467 907 551 930 1.56e-42 169
MsaG003837 MtrunA17_Chr5g0442141 27.027 592 325 16 316 880 585 1096 1.91e-42 169
MsaG003837 MtrunA17_Chr4g0066651 28.114 562 299 15 331 866 975 1457 1.41e-41 167
MsaG003837 MtrunA17_Chr5g0403921 26.182 592 327 18 326 888 167 677 2.11e-39 157
MsaG003837 MtrunA17_Chr2g0296421 24.607 573 305 16 337 862 505 997 2.76e-38 155
MsaG003837 MtrunA17_Chr8g0352361 25.835 569 298 18 337 859 355 845 1.29e-36 149
MsaG003837 MtrunA17_Chr1g0205891 26.712 584 310 19 330 885 361 854 4.98e-36 148
MsaG003837 MtrunA17_Chr5g0394201 25.952 578 321 15 330 885 348 840 1.49e-35 146
MsaG003837 MtrunA17_Chr4g0052341 25.725 552 295 16 370 890 762 1229 1.28e-34 144
MsaG003837 MtrunA17_Chr1g0163011 27.846 571 326 18 343 870 195 722 6.09e-34 140
MsaG003837 MtrunA17_Chr3g0114161 25.209 599 338 19 337 871 656 1208 1.17e-31 134
MsaG003837 MtrunA17_Chr7g0224051 24.452 593 346 18 337 871 529 1077 1.64e-30 130
MsaG003837 MtrunA17_Chr8g0348721 25.232 539 306 16 323 836 966 1432 1.02e-29 128
MsaG003837 MtrunA17_Chr1g0175191 27.917 480 262 16 195 639 381 811 3.48e-29 126
MsaG003837 MtrunA17_Chr1g0175191 36.601 153 93 2 714 866 1062 1210 1.38e-18 92.0
MsaG003837 MtrunA17_Chr7g0233001 26.128 421 232 12 458 865 120 474 3.71e-28 120
MsaG003837 MtrunA17_Chr7g0248031 24.733 562 299 18 314 836 964 1440 3.97e-28 123
MsaG003837 MtrunA17_Chr7g0233021 27.040 429 216 12 458 865 833 1185 1.57e-27 120
MsaG003837 MtrunA17_Chr4g0047081 26.014 419 235 11 458 865 835 1189 6.37e-27 119
MsaG003837 MtrunA17_Chr3g0137091 35.610 205 122 6 690 890 585 783 8.82e-24 108
MsaG003837 MtrunA17_Chr3g0137091 27.483 302 141 9 343 601 289 555 1.42e-19 95.1
MsaG003837 MtrunA17_Chr3g0095091 26.140 329 181 9 341 641 569 863 6.30e-22 103
MsaG003837 MtrunA17_Chr3g0095091 36.571 175 108 2 705 879 878 1049 1.26e-21 102
MsaG003837 MtrunA17_Chr7g0225791 36.364 154 94 2 715 865 1087 1239 1.95e-20 98.2
MsaG003837 MtrunA17_Chr7g0232971 35.928 167 102 2 715 877 1098 1263 2.71e-20 97.4
MsaG003837 MtrunA17_Chr7g0232991 36.364 165 102 2 715 877 462 625 8.45e-20 95.1
MsaG003837 MtrunA17_Chr2g0320781 36.184 152 85 3 715 859 94 240 1.08e-19 89.7
MsaG003837 MtrunA17_Chr7g0257101 27.526 287 171 6 332 598 567 836 1.14e-18 92.4
MsaG003837 MtrunA17_Chr7g0257101 37.736 159 95 3 708 866 1186 1340 4.26e-17 87.4
MsaG003837 MtrunA17_Chr5g0437621 42.478 113 64 1 753 865 1147 1258 2.31e-18 91.3
MsaG003837 MtrunA17_Chr5g0437621 27.419 248 124 9 325 519 701 945 4.80e-18 90.1
MsaG003837 MtrunA17_Chr7g0233031 35.484 155 93 3 715 865 1047 1198 7.39e-18 89.7
MsaG003837 MtrunA17_Chr1g0168031 32.778 180 115 4 706 884 978 1152 3.21e-17 87.4
MsaG003837 MtrunA17_Chr1g0191141 37.815 119 73 1 753 871 946 1063 7.47e-17 86.3
MsaG003837 MtrunA17_Chr1g0191141 23.714 350 181 11 337 607 516 858 2.42e-15 81.3
MsaG003837 MtrunA17_Chr2g0320751 30.645 186 118 4 702 884 838 1015 7.22e-15 79.7
MsaG003837 MtrunA17_Chr1g0212331 38.182 110 66 1 754 863 907 1014 4.55e-14 77.0
MsaG003837 MtrunA17_Chr2g0281601 35.294 136 84 2 728 863 1146 1277 8.14e-13 73.2
MsaG003837 MtrunA17_Chr7g0231521 32.934 167 100 3 710 866 282 446 1.35e-12 72.0
MsaG003837 MtrunA17_Chr7g0232121 33.133 166 99 3 710 865 361 524 1.37e-12 72.4
MsaG003837 MtrunA17_Chr7g0255821 34.302 172 93 5 709 867 643 807 1.47e-12 72.0
MsaG003837 MtrunA17_Chr7g0255821 25.969 258 141 8 373 597 250 490 7.05e-11 66.6
MsaG003837 MtrunA17_Chr4g0069451 33.108 148 94 3 705 852 462 604 2.56e-12 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG003837 AT1G08600.1 68.160 848 227 13 237 1057 615 1446 0.0 1119
MsaG003837 AT1G08600.4 66.743 869 225 14 237 1057 615 1467 0.0 1110
MsaG003837 AT1G08600.3 66.743 869 225 14 237 1057 615 1467 0.0 1110
MsaG003837 AT1G08600.2 66.743 869 225 14 237 1057 615 1467 0.0 1110
MsaG003837 AT3G19210.3 29.403 636 344 16 322 899 134 722 5.49e-75 264
MsaG003837 AT3G19210.1 29.560 636 343 16 322 899 134 722 2.74e-74 265
MsaG003837 AT3G19210.2 28.931 636 345 16 322 899 134 720 5.19e-70 252
MsaG003837 AT1G03750.1 30.228 569 341 14 333 866 129 676 3.43e-58 216
MsaG003837 AT5G63950.2 27.134 656 378 18 335 961 369 953 1.22e-51 198
MsaG003837 AT5G63950.1 26.435 662 392 18 335 961 369 970 2.42e-50 194
MsaG003837 AT5G19310.2 27.098 572 322 14 330 885 107 599 9.65e-47 181
MsaG003837 AT5G19310.1 27.098 572 322 14 330 885 371 863 5.19e-46 180
MsaG003837 AT2G13370.1 27.899 595 312 17 316 879 593 1101 1.73e-44 176
MsaG003837 AT2G13370.2 27.899 595 312 17 316 879 593 1101 1.73e-44 176
MsaG003837 AT2G13370.3 27.899 595 312 17 316 879 593 1101 1.73e-44 176
MsaG003837 AT3G06400.2 28.049 574 298 19 336 887 182 662 1.87e-44 175
MsaG003837 AT3G06400.1 28.049 574 298 19 336 887 182 662 1.96e-44 175
MsaG003837 AT3G06400.3 28.049 574 298 19 336 887 182 662 2.21e-44 175
MsaG003837 AT4G31900.3 26.299 635 325 18 326 936 208 723 5.58e-44 174
MsaG003837 AT4G31900.1 26.299 635 325 18 326 936 208 723 6.48e-44 174
MsaG003837 AT5G18620.2 27.009 585 314 16 324 887 175 667 7.06e-44 174
MsaG003837 AT4G31900.2 26.299 635 325 18 326 936 167 682 7.39e-44 174
MsaG003837 AT5G18620.1 27.009 585 314 16 324 887 175 667 7.46e-44 173
MsaG003837 AT2G21450.2 27.350 585 304 22 331 862 260 776 7.38e-43 169
MsaG003837 AT2G21450.3 27.350 585 304 22 331 862 162 678 8.59e-43 168
MsaG003837 AT2G21450.1 27.350 585 304 22 331 862 253 769 9.23e-43 169
MsaG003837 AT3G54280.1 27.402 562 306 17 375 884 1473 1984 1.77e-41 167
MsaG003837 AT3G54280.2 27.402 562 306 17 375 884 1504 2015 2.48e-41 166
MsaG003837 AT2G28290.2 28.442 552 292 16 339 866 750 1222 3.06e-41 166
MsaG003837 AT2G28290.5 28.442 552 292 16 339 866 751 1223 3.17e-41 166
MsaG003837 AT2G28290.3 28.442 552 292 16 339 866 750 1222 3.31e-41 166
MsaG003837 AT2G28290.4 28.442 552 292 16 339 866 750 1222 3.31e-41 166
MsaG003837 AT2G28290.6 28.442 552 292 16 339 866 751 1223 3.31e-41 166
MsaG003837 AT2G28290.1 28.442 552 292 16 339 866 750 1222 3.34e-41 166
MsaG003837 AT3G06010.1 25.739 575 327 14 330 885 388 881 1.71e-39 159
MsaG003837 AT2G16390.2 25.517 580 298 16 337 862 347 846 3.42e-38 155
MsaG003837 AT2G16390.1 25.517 580 298 16 337 862 344 843 6.12e-38 154
MsaG003837 AT5G44800.1 25.790 601 320 19 323 890 666 1173 1.40e-36 151
MsaG003837 AT2G25170.1 29.330 433 218 12 464 890 417 767 9.62e-36 148
MsaG003837 AT2G25170.4 29.330 433 218 12 464 890 417 767 9.62e-36 148
MsaG003837 AT2G25170.3 29.330 433 218 12 464 890 443 793 1.36e-35 147
MsaG003837 AT2G25170.2 29.330 433 218 12 464 890 434 784 1.58e-35 147
MsaG003837 AT1G05490.1 26.988 415 232 9 459 865 1001 1352 1.83e-32 137
MsaG003837 AT3G24340.1 24.104 614 333 20 337 885 571 1116 1.86e-32 137
MsaG003837 AT2G02090.1 26.842 570 327 18 343 867 213 737 5.33e-32 134
MsaG003837 AT3G12810.1 30.864 324 184 8 333 639 526 826 1.48e-29 128
MsaG003837 AT3G12810.1 42.342 111 62 1 756 866 1115 1223 7.75e-18 90.1
MsaG003837 AT3G12810.2 30.864 324 184 8 333 639 522 822 1.49e-29 128
MsaG003837 AT3G12810.2 42.342 111 62 1 756 866 1111 1219 7.81e-18 90.1
MsaG003837 AT2G46020.5 26.286 525 304 19 330 836 967 1426 7.93e-28 122
MsaG003837 AT2G46020.1 26.286 525 304 19 330 836 967 1426 7.93e-28 122
MsaG003837 AT2G46020.6 26.286 525 304 19 330 836 967 1426 7.93e-28 122
MsaG003837 AT2G46020.2 26.554 531 296 21 330 836 967 1427 8.13e-28 122
MsaG003837 AT2G46020.3 26.554 531 296 21 330 836 967 1427 8.13e-28 122
MsaG003837 AT2G46020.4 26.554 531 296 21 330 836 967 1427 8.13e-28 122
MsaG003837 AT2G18760.3 34.762 210 126 3 703 905 775 980 1.17e-26 118
MsaG003837 AT2G18760.3 29.480 173 117 1 467 639 602 769 8.88e-16 83.2
MsaG003837 AT2G18760.4 34.762 210 126 3 703 905 716 921 1.39e-26 118
MsaG003837 AT2G18760.4 30.058 173 116 2 467 639 543 710 8.34e-16 83.2
MsaG003837 AT2G18760.1 34.762 210 126 3 703 905 716 921 1.39e-26 118
MsaG003837 AT2G18760.1 30.058 173 116 2 467 639 543 710 8.34e-16 83.2
MsaG003837 AT2G18760.2 34.762 210 126 3 703 905 716 921 1.39e-26 118
MsaG003837 AT2G18760.2 30.058 173 116 2 467 639 543 710 8.34e-16 83.2
MsaG003837 AT2G18760.7 34.762 210 126 3 703 905 716 921 1.39e-26 118
MsaG003837 AT2G18760.7 30.058 173 116 2 467 639 543 710 8.34e-16 83.2
MsaG003837 AT2G18760.5 34.762 210 126 3 703 905 716 921 1.39e-26 118
MsaG003837 AT2G18760.5 30.058 173 116 2 467 639 543 710 8.34e-16 83.2
MsaG003837 AT2G18760.6 34.762 210 126 3 703 905 716 921 1.39e-26 118
MsaG003837 AT2G18760.6 30.058 173 116 2 467 639 543 710 8.34e-16 83.2
MsaG003837 AT5G22750.1 24.729 554 323 18 407 884 493 1028 4.41e-25 113
MsaG003837 AT3G42670.4 32.222 180 110 3 699 871 1043 1217 1.05e-19 96.3
MsaG003837 AT3G42670.4 26.939 245 126 7 327 520 660 902 1.23e-17 89.4
MsaG003837 AT3G42670.2 32.222 180 110 3 699 871 1041 1215 1.07e-19 95.9
MsaG003837 AT3G42670.2 26.939 245 126 7 327 520 658 900 1.24e-17 89.4
MsaG003837 AT3G42670.3 32.222 180 110 3 699 871 1041 1215 1.07e-19 95.9
MsaG003837 AT3G42670.3 26.939 245 126 7 327 520 658 900 1.24e-17 89.4
MsaG003837 AT3G42670.1 32.222 180 110 3 699 871 1041 1215 1.07e-19 95.9
MsaG003837 AT3G42670.1 26.939 245 126 7 327 520 658 900 1.24e-17 89.4
MsaG003837 AT5G20420.1 40.336 119 70 1 753 871 1104 1221 4.56e-19 94.0
MsaG003837 AT5G20420.1 28.745 247 120 9 327 520 663 906 1.10e-17 89.4
MsaG003837 AT5G66750.1 35.450 189 106 5 700 877 501 684 5.66e-19 93.2
MsaG003837 AT5G43530.1 32.796 186 118 4 701 884 1096 1276 8.04e-18 90.1
MsaG003837 AT3G57300.1 26.552 290 170 8 332 598 575 844 3.81e-17 87.8
MsaG003837 AT3G57300.1 37.107 159 96 3 708 866 1200 1354 1.49e-16 85.9
MsaG003837 AT3G57300.4 26.552 290 170 8 332 598 575 844 3.81e-17 87.8
MsaG003837 AT3G57300.4 37.107 159 96 3 708 866 1200 1354 1.49e-16 85.9
MsaG003837 AT3G57300.3 26.552 290 170 8 332 598 575 844 5.77e-17 87.0
MsaG003837 AT3G57300.2 37.107 159 96 3 708 866 1233 1387 1.33e-16 86.3
MsaG003837 AT3G20010.2 38.053 113 68 1 751 863 620 730 2.70e-14 78.2
MsaG003837 AT3G20010.3 38.053 113 68 1 751 863 645 755 2.74e-14 78.2
MsaG003837 AT3G20010.1 38.053 113 68 1 751 863 911 1021 5.26e-14 77.4
MsaG003837 AT3G20010.5 38.053 113 68 1 751 863 911 1021 5.26e-14 77.4
MsaG003837 AT3G20010.7 38.053 113 68 1 751 863 911 1021 5.26e-14 77.4
MsaG003837 AT1G61140.1 32.919 161 97 4 729 884 1122 1276 1.76e-13 75.9
MsaG003837 AT1G61140.3 32.919 161 97 4 729 884 964 1118 2.61e-13 75.1
MsaG003837 AT2G44980.1 33.121 157 102 2 710 866 364 517 3.25e-13 74.7
MsaG003837 AT2G44980.2 32.530 166 101 3 710 866 373 536 1.16e-12 72.8
MsaG003837 AT2G44980.3 32.530 166 101 3 710 866 372 535 1.19e-12 72.8
MsaG003837 AT1G50410.2 39.252 107 61 2 758 863 852 955 1.43e-12 72.8
MsaG003837 AT1G50410.1 39.252 107 61 2 758 863 852 955 1.43e-12 72.8
MsaG003837 AT1G50410.3 39.252 107 61 2 758 863 852 955 1.43e-12 72.8
MsaG003837 AT1G11100.4 31.056 161 104 3 727 884 1112 1268 1.50e-12 72.8
MsaG003837 AT1G11100.1 31.056 161 104 3 727 884 1068 1224 1.51e-12 72.8
MsaG003837 AT1G11100.2 31.056 161 104 3 727 884 1111 1267 1.55e-12 72.8
MsaG003837 AT1G11100.3 31.056 161 104 3 727 884 969 1125 1.78e-12 72.4
MsaG003837 AT1G11100.5 31.056 161 104 3 727 884 925 1081 1.79e-12 72.4
MsaG003837 AT5G05130.1 32.847 137 90 1 752 886 745 881 2.18e-12 72.0
MsaG003837 AT5G05130.1 26.267 217 126 7 399 597 353 553 3.75e-11 68.2
MsaG003837 AT1G48310.2 31.667 180 118 3 702 881 462 636 2.54e-12 71.6
MsaG003837 AT1G48310.1 31.667 180 118 3 702 881 457 631 2.54e-12 71.6
MsaG003837 AT1G48310.3 35.099 151 93 3 702 852 457 602 9.68e-12 69.7

Find 227 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATGAGCCTCTGAATAAA+AGG 0.180734 1:-62635932 MsaT003837.1:CDS
CTAGTTCCTTCCTTTGTATC+AGG 0.185742 1:+62648852 None:intergenic
TGAACAAAGTAATCCGATTT+TGG 0.201774 1:-62634334 MsaT003837.1:CDS
CAACATTCATGTCCATTCTT+TGG 0.205545 1:+62638917 None:intergenic
GACCATTCTCTATAGGATTT+TGG 0.207529 1:+62639022 None:intergenic
GCCTTTGACACTTCTGGCTT+TGG 0.215891 1:+62631381 None:intergenic
ATGCTGCATCTCTTTGAATT+TGG 0.217787 1:-62634393 MsaT003837.1:CDS
AGCTGCCAAGTTTCTAATTC+AGG 0.220467 1:+62631345 None:intergenic
ATGGAGGCCACTAAAATTAA+AGG 0.238368 1:-62648780 MsaT003837.1:intron
CAGTTATTCTGATAAGTTAA+TGG 0.262301 1:-62634268 MsaT003837.1:CDS
CTGTAAATGTGCTACATAAT+TGG 0.270452 1:-62643114 MsaT003837.1:CDS
ATCCTCTATGAACAATTAAA+AGG 0.274422 1:-62638946 MsaT003837.1:CDS
CTTCCACTTTCCTTGAATAC+TGG 0.276774 1:-62652061 MsaT003837.1:CDS
ATCATCACCCAGTGGAGATT+TGG 0.278438 1:+62648692 None:intergenic
CAATTATGTAGCACATTTAC+AGG 0.279145 1:+62643115 None:intergenic
TGTTATCACGAAAACAGTTT+TGG 0.279547 1:+62638876 None:intergenic
AGAACTTTGCCATGCTTTGC+AGG 0.288309 1:-62641653 MsaT003837.1:intron
AAAAGCCTGTGTTTGCTTAT+CGG 0.293984 1:-62634610 MsaT003837.1:CDS
GGTAATAGCTTTCTTGTATA+CGG 0.296703 1:-62643185 MsaT003837.1:CDS
GGGCCTGGGTAAAACATTTC+AGG 0.297471 1:-62646922 MsaT003837.1:intron
TCATCAAGAATCCAAAATTC+AGG 0.304409 1:+62652547 None:intergenic
GGCAATGAGAAGTGTTGATT+TGG 0.306108 1:-62643164 MsaT003837.1:CDS
AATCGTGTTGTTATAGTTGA+TGG 0.306476 1:-62635849 MsaT003837.1:CDS
GTGAATGTTGTGAGAGAAAA+AGG 0.307732 1:-62647515 MsaT003837.1:CDS
GATATACCCGTTTCCAGTTC+TGG 0.315917 1:-62648579 MsaT003837.1:CDS
CAGCATTTCTTCTTTAGATA+TGG 0.319091 1:+62634410 None:intergenic
TTGGAAGCAGTCATGAGTTT+AGG 0.321636 1:-62639137 MsaT003837.1:CDS
CAAGGCTGCAGGTTTGAATA+TGG 0.324481 1:-62648799 MsaT003837.1:CDS
TTCCCACATGAATCTTATTC+CGG 0.334927 1:+62647016 None:intergenic
GATTGATCAAAGTGGCAAAA+TGG 0.335872 1:-62636595 MsaT003837.1:CDS
GACACTTCTGGCTTTGGATC+AGG 0.337059 1:+62631387 None:intergenic
TGTGTTTGCTTATCGGTTGC+TGG 0.338471 1:-62634603 MsaT003837.1:CDS
GCAAAGAAGACAATTTAAAA+AGG 0.344777 1:-62651650 MsaT003837.1:intron
AGATTCATGTAAATGATAAT+TGG 0.347135 1:+62631530 None:intergenic
CTGGCACTTTACTTGTTTCA+AGG 0.347248 1:+62639329 None:intergenic
CAGAGATAAATGTTTCAATA+AGG 0.348051 1:-62648500 MsaT003837.1:intron
TCAACCCGAGCAGGCTCTTT+GGG 0.348310 1:-62635891 MsaT003837.1:CDS
TTCAACCCGAGCAGGCTCTT+TGG 0.353917 1:-62635892 MsaT003837.1:CDS
GAATCCAACATATGATCTTC+AGG 0.360132 1:-62635820 MsaT003837.1:CDS
GATACTTGATGACACTGAAT+TGG 0.362598 1:-62647791 MsaT003837.1:CDS
TCCGATTCTAATGTGCTTGC+TGG 0.363559 1:-62637391 MsaT003837.1:CDS
GTGTGTTGACCATTCTCTAT+AGG 0.363761 1:+62639015 None:intergenic
TTGTTATAGTTGATGGTTCT+TGG 0.365963 1:-62635842 MsaT003837.1:CDS
CTCTAATGTTAAGGAAAATC+AGG 0.369855 1:-62638794 MsaT003837.1:CDS
AATTTCAACGCTTGCACCTT+CGG 0.370186 1:+62647565 None:intergenic
CAAAGCATGGCAAAGTTCTC+TGG 0.370652 1:+62641657 None:intergenic
CAGAGAAGAATTGCACTTAC+AGG 0.371704 1:-62639309 MsaT003837.1:CDS
AATGTGCCCGGGTGGTAAGG+TGG 0.386260 1:-62631212 MsaT003837.1:CDS
TGAATCACTACTACCAGAAC+TGG 0.387184 1:+62648566 None:intergenic
GGTGCAAGCGTTGAAATTCT+TGG 0.389818 1:-62647560 MsaT003837.1:CDS
TCATCACCCAGTGGAGATTT+GGG 0.392049 1:+62648693 None:intergenic
CATAGAGGATGTGAGACCTT+TGG 0.401782 1:+62638959 None:intergenic
CTGGTGGAAAGATATTCTTC+AGG 0.403942 1:-62636634 MsaT003837.1:CDS
TTCCCTCGCTTTCCACTTCG+TGG 0.404393 1:+62636463 None:intergenic
TGCACAATAGCGATGCCATA+TGG 0.408753 1:+62652018 None:intergenic
CTTAGTTCAGCCAAAGTCTC+AGG 0.412124 1:+62634357 None:intergenic
TGACGAGAATCCTGAGACTT+TGG 0.412903 1:-62634367 MsaT003837.1:CDS
AGTGAATCCCCGGCCAAAAT+CGG 0.415327 1:+62634321 None:intergenic
GCTTATCGGTTGCTGGCTCA+TGG 0.417807 1:-62634596 MsaT003837.1:CDS
AAATTCTCAACAGCATCTTC+AGG 0.422401 1:+62637442 None:intergenic
CAAAGTTAAACCAGTATTCA+AGG 0.424194 1:+62652051 None:intergenic
TCAATCAGAAAAGTTAAGTC+TGG 0.425797 1:-62646981 MsaT003837.1:CDS
GGGAATGTGCCCGGGTGGTA+AGG 0.426245 1:-62631215 MsaT003837.1:CDS
GTTGCTGGCTCATGGAACTA+TGG 0.429512 1:-62634588 MsaT003837.1:CDS
GTTTCATATCTACAGATTGC+CGG 0.430731 1:-62647035 MsaT003837.1:intron
GCAATGAGAAGTGTTGATTT+GGG 0.431839 1:-62643163 MsaT003837.1:CDS
AGAAGGGAAGAGATTGGTAT+AGG 0.435171 1:-62636432 MsaT003837.1:intron
GCAATGGCTGCTGCAACAAA+TGG 0.438259 1:+62651703 None:intergenic
AAAAGGCTTTGTCCAAAGAA+TGG 0.441822 1:-62638929 MsaT003837.1:CDS
AAAGTTAAGTCTGGAGATAA+AGG 0.443967 1:-62646972 MsaT003837.1:CDS
AAGTCTGGAGATAAAGGTCT+AGG 0.444205 1:-62646966 MsaT003837.1:CDS
GAGTTCTGCCGTGGGTGATA+AGG 0.444536 1:-62636547 MsaT003837.1:CDS
AAGTTAATGGAAAGCTTACT+AGG 0.447487 1:-62634255 MsaT003837.1:CDS
AGCAAAGCTGAAAGCCCATC+AGG 0.448764 1:-62647459 MsaT003837.1:intron
CTGTAAGTGCAATTCTTCTC+TGG 0.449880 1:+62639310 None:intergenic
GCACAATAGCGATGCCATAT+GGG 0.453354 1:+62652019 None:intergenic
TCATCACACACAAGAATGTC+AGG 0.455112 1:+62639393 None:intergenic
TCATGCTGGAAGATGTATCT+AGG 0.455740 1:-62643039 MsaT003837.1:CDS
GCGAGGGAAGCTGTGGAAGA+AGG 0.455933 1:-62636449 MsaT003837.1:CDS
CTCACCGTCATTTAGACGCT+TGG 0.456602 1:+62648653 None:intergenic
CAGTCTGTGGGGAATGTGCC+CGG 0.457074 1:-62631224 MsaT003837.1:CDS
ATCAGGAAAATTTAAGAAAG+AGG 0.457708 1:-62638777 MsaT003837.1:CDS
TTCAGCTTTGCTGAAATGCT+CGG 0.459184 1:+62647470 None:intergenic
ATACTTGATGACACTGAATT+GGG 0.459511 1:-62647790 MsaT003837.1:CDS
GCATGGGTTCTCTAATGTTA+AGG 0.459575 1:-62638803 MsaT003837.1:CDS
AGATCCTCCCAAATCTCCAC+TGG 0.462293 1:-62648700 MsaT003837.1:CDS
ACTGTACTCTCAAAGACTTC+AGG 0.462679 1:+62647639 None:intergenic
ATCAAAAGAGGAGCAAGATA+TGG 0.463169 1:-62631478 MsaT003837.1:CDS
TTTAGTCGCTTTAATTCTGA+TGG 0.464232 1:+62643067 None:intergenic
AGGATGATGCAATTGTTGAT+AGG 0.480239 1:-62649311 MsaT003837.1:CDS
CCGCCAAGGAAGGATGGTAA+TGG 0.486764 1:-62637096 MsaT003837.1:CDS
ACCTCTTCAAAACAATCTCA+TGG 0.487903 1:-62639283 MsaT003837.1:CDS
TTTCACTAGGTTACAAAAGA+GGG 0.488447 1:-62634474 MsaT003837.1:intron
CATACAGTACCACATTCAAA+TGG 0.489317 1:-62634294 MsaT003837.1:CDS
AAGAGGAGCAAGATATGGCT+TGG 0.489842 1:-62631473 MsaT003837.1:CDS
TGTGGAAGAAGGGAAGAGAT+TGG 0.490309 1:-62636438 MsaT003837.1:CDS
ACTACTACCAGAACTGGAAA+CGG 0.490473 1:+62648572 None:intergenic
TCTAGCGCATACCATGGGCC+TGG 0.490607 1:-62646937 MsaT003837.1:CDS
CTGGGTATCAGGCATTAGCT+CGG 0.490787 1:-62638744 MsaT003837.1:CDS
TTCCAAAATCCTATAGAGAA+TGG 0.491699 1:-62639024 MsaT003837.1:CDS
AATCCATTACCATCCTTCCT+TGG 0.493149 1:+62637093 None:intergenic
GAAGAAATTGATGATATTGA+TGG 0.495281 1:-62651739 MsaT003837.1:CDS
TGTATCGCAAATCGCTGGAA+TGG 0.496073 1:-62631446 MsaT003837.1:CDS
TAGTTCCTTCCTTTGTATCA+GGG 0.497507 1:+62648853 None:intergenic
AAGGAAGGAACTAGCGATGA+AGG 0.501096 1:-62648843 MsaT003837.1:CDS
CTACTACCAGAACTGGAAAC+GGG 0.501506 1:+62648573 None:intergenic
TAATGAGCCTCTGAATAAAA+GGG 0.504753 1:-62635931 MsaT003837.1:CDS
CCATTACCATCCTTCCTTGG+CGG 0.505193 1:+62637096 None:intergenic
TCCAGCAAGCACATTAGAAT+CGG 0.505461 1:+62637390 None:intergenic
AAGAGATTCATTGACGTGCA+TGG 0.505631 1:-62638820 MsaT003837.1:CDS
GGAGGACGGAGTTCATCAAA+TGG 0.507672 1:-62643093 MsaT003837.1:CDS
CTAGCGCATACCATGGGCCT+GGG 0.510592 1:-62646936 MsaT003837.1:CDS
ATCAGAATTAAAGCGACTAA+AGG 0.510850 1:-62643065 MsaT003837.1:CDS
TCAATTTAACCCTGATACAA+AGG 0.511464 1:-62648862 MsaT003837.1:CDS
GTATCGCAAATCGCTGGAAT+GGG 0.513417 1:-62631445 MsaT003837.1:CDS
TAATACCCAAAGAGCCTGCT+CGG 0.513600 1:+62635886 None:intergenic
CGAGGGAAGCTGTGGAAGAA+GGG 0.514723 1:-62636448 MsaT003837.1:CDS
TTCAGGCTATCTATCGAGCT+TGG 0.515017 1:-62635803 MsaT003837.1:CDS
AAAGAAAATAGCAATTGAAA+AGG 0.515650 1:-62647755 MsaT003837.1:intron
GCAAAGTTCTCTGGCCATCT+CGG 0.516702 1:+62641666 None:intergenic
AGCAATAATTAAACAATCAC+AGG 0.520124 1:+62651990 None:intergenic
GCGACTAAAGGTCTTCATGC+TGG 0.521482 1:-62643053 MsaT003837.1:CDS
TTCAAGTACGTTTGAAACAC+AGG 0.522320 1:-62649284 MsaT003837.1:CDS
TAGAGTGGTCGATAGACAAC+AGG 0.524795 1:-62634442 MsaT003837.1:CDS
TATGGCATCGCTATTGTGCA+TGG 0.525367 1:-62652015 MsaT003837.1:CDS
AGAGGAGCAAGATATGGCTT+GGG 0.527149 1:-62631472 MsaT003837.1:CDS
ATGTGCCCGGGTGGTAAGGT+GGG 0.529377 1:-62631211 MsaT003837.1:CDS
GTTTCACTAGGTTACAAAAG+AGG 0.535140 1:-62634475 MsaT003837.1:intron
TTTGCCATTTGCAAAATCCC+AGG 0.538913 1:+62637487 None:intergenic
GGAGGTGTATCGCAAATCGC+TGG 0.539524 1:-62631451 MsaT003837.1:CDS
AGAGATTCATTGACGTGCAT+GGG 0.539562 1:-62638819 MsaT003837.1:CDS
TGGTGGAAAGATATTCTTCA+GGG 0.540061 1:-62636633 MsaT003837.1:CDS
GTACATGGCTCTCCATCGAC+AGG 0.542623 1:+62648904 None:intergenic
ATCACCCACGGCAGAACTCA+TGG 0.542653 1:+62636551 None:intergenic
ACACTTATTTCAACCCGAGC+AGG 0.545519 1:-62635900 MsaT003837.1:CDS
TAAATGTGCTACATAATTGG+AGG 0.545640 1:-62643111 MsaT003837.1:CDS
AGAGAAAATATATAAGCGCC+AGG 0.545730 1:-62634564 MsaT003837.1:intron
TGAAATTCTTGGTGATGCAC+TGG 0.547692 1:-62647549 MsaT003837.1:CDS
GCAGTCATGAGTTTAGGAAC+CGG 0.549808 1:-62639131 MsaT003837.1:intron
AAATGATTTGCCGCCAAGGA+AGG 0.550627 1:-62637106 MsaT003837.1:CDS
GGATGGAAGGACAGAGAGCT+CGG 0.550920 1:-62635979 MsaT003837.1:CDS
AAACCAGTATTCAAGGAAAG+TGG 0.551139 1:+62652058 None:intergenic
CAGATGAAGACTTCTGTACA+TGG 0.552140 1:+62648889 None:intergenic
GGACATGAATGTTGTGAAGA+AGG 0.552708 1:-62638908 MsaT003837.1:CDS
TTGCCATTTGCAAAATCCCA+GGG 0.555858 1:+62637488 None:intergenic
CATCAAGAATCCAAAATTCA+GGG 0.556856 1:+62652548 None:intergenic
AGTCTTCCCACCTTACCACC+CGG 0.561656 1:+62631205 None:intergenic
ATCAAGAATCCAAAATTCAG+GGG 0.561698 1:+62652549 None:intergenic
AATACCCAAAGAGCCTGCTC+GGG 0.563586 1:+62635887 None:intergenic
GGTGCTCCAGGCTGGATGGA+AGG 0.565240 1:-62635992 MsaT003837.1:intron
CTCTCAAAGCTACCACGAAG+TGG 0.565513 1:-62636475 MsaT003837.1:CDS
TGGGTATCAGGCATTAGCTC+GGG 0.565614 1:-62638743 MsaT003837.1:intron
AAAGTGGAAGGGGATGATAG+AGG 0.566334 1:+62652074 None:intergenic
TCAGGCACAGACTCACCAAT+CGG 0.567349 1:+62631405 None:intergenic
GTATTCAAGGAAAGTGGAAG+GGG 0.567818 1:+62652064 None:intergenic
ATTCTTGGTGATGCACTGGC+AGG 0.568159 1:-62647545 MsaT003837.1:CDS
AGTAGATATGGAACCACCCT+GGG 0.568515 1:-62637504 MsaT003837.1:intron
ATACAAATGATTTGCCGCCA+AGG 0.568732 1:-62637110 MsaT003837.1:CDS
TCGATAGACAACAGGTGCAT+AGG 0.574247 1:-62634434 MsaT003837.1:CDS
AGAGGAAAAGCTATCAAAAG+AGG 0.575120 1:-62631490 MsaT003837.1:CDS
GGCTGCTGCAACAAATGGAT+CGG 0.576938 1:+62651708 None:intergenic
TCTGACAATAACAAGGCTGC+AGG 0.578273 1:-62648810 MsaT003837.1:CDS
AGGAAGGAACTAGCGATGAA+GGG 0.579108 1:-62648842 MsaT003837.1:CDS
TGTATGTTTCAGTGAATCCC+CGG 0.580484 1:+62634311 None:intergenic
TGGCTCTCCATCGACAGGAT+AGG 0.581038 1:+62648909 None:intergenic
AACTAATACCTTATCACCCA+CGG 0.581563 1:+62636539 None:intergenic
GATTTGCCGCCAAGGAAGGA+TGG 0.582755 1:-62637102 MsaT003837.1:CDS
TATAAAGAGATTGATCAAAG+TGG 0.583643 1:-62636603 MsaT003837.1:CDS
CAGTATTCAAGGAAAGTGGA+AGG 0.586012 1:+62652062 None:intergenic
AGTCTGTGGGGAATGTGCCC+GGG 0.590845 1:-62631223 MsaT003837.1:CDS
GATTCTAATGTGCTTGCTGG+AGG 0.592820 1:-62637388 MsaT003837.1:intron
ATGGCATCGCTATTGTGCAT+GGG 0.593396 1:-62652014 MsaT003837.1:CDS
TAGTAGATATGGAACCACCC+TGG 0.594736 1:-62637505 MsaT003837.1:intron
CACAATAGCGATGCCATATG+GGG 0.596165 1:+62652020 None:intergenic
TCCAAAGCCAGAAGTGTCAA+AGG 0.596179 1:-62631382 MsaT003837.1:CDS
GAGGACGGAGTTCATCAAAT+GGG 0.596191 1:-62643092 MsaT003837.1:CDS
AGAGGGGCTTGCTGCTAGAG+TGG 0.597809 1:-62634457 MsaT003837.1:CDS
TCTATGACAGGTCAAAGAAG+AGG 0.599829 1:-62649331 MsaT003837.1:intron
CACTGTTGACGATATCAGCC+CGG 0.600212 1:+62648607 None:intergenic
TTCACTAGGTTACAAAAGAG+GGG 0.600616 1:-62634473 MsaT003837.1:intron
TACTAGGCAAGCATCATCCC+CGG 0.600644 1:-62634239 MsaT003837.1:intron
TGTCAGCAAATGTGCAAGGT+TGG 0.604838 1:+62631281 None:intergenic
GTGGAAAGCGAGGGAAGCTG+TGG 0.605954 1:-62636456 MsaT003837.1:CDS
ACTCACCATGAGTTCTGCCG+TGG 0.606474 1:-62636556 MsaT003837.1:CDS
GCAAATGGCAAAAGAAGACA+AGG 0.607680 1:-62637476 MsaT003837.1:CDS
AGGCTATCTATCGAGCTTGG+AGG 0.607856 1:-62635800 MsaT003837.1:intron
ATAGCCTGAAGATCATATGT+TGG 0.607979 1:+62635816 None:intergenic
AAGTACACCTATCCTGTCGA+TGG 0.608476 1:-62648916 MsaT003837.1:CDS
AGTATTCAAGGAAAGTGGAA+GGG 0.612566 1:+62652063 None:intergenic
AGTCTGGAGATAAAGGTCTA+GGG 0.616418 1:-62646965 MsaT003837.1:CDS
ATATGGTGCTCCAGGCTGGA+TGG 0.617768 1:-62635996 MsaT003837.1:intron
TTTAACCCTGATACAAAGGA+AGG 0.618768 1:-62648858 MsaT003837.1:CDS
GGAGCAAGATATGGCTTGGG+AGG 0.620721 1:-62631469 MsaT003837.1:CDS
GGAAGGAACTAGCGATGAAG+GGG 0.623675 1:-62648841 MsaT003837.1:CDS
CGTAAGTTAAATGACCTGAT+GGG 0.624071 1:+62647445 None:intergenic
CTACCACGAAGTGGAAAGCG+AGG 0.624152 1:-62636466 MsaT003837.1:CDS
GTCTTCCCACCTTACCACCC+GGG 0.624178 1:+62631206 None:intergenic
GAAGGACAGAGAGCTCGGAA+AGG 0.624362 1:-62635974 MsaT003837.1:CDS
GTGTATTCTAGCGCATACCA+TGG 0.628693 1:-62646943 MsaT003837.1:CDS
TGAGAAATCGTTTCACAAAG+CGG 0.629607 1:-62631311 MsaT003837.1:CDS
TTGCCGGAATAAGATTCATG+TGG 0.630588 1:-62647019 MsaT003837.1:CDS
GGAACCAAGCGTCTAAATGA+CGG 0.632189 1:-62648657 MsaT003837.1:CDS
AAAAGAATTAGATCTTTCTG+AGG 0.632248 1:-62651674 MsaT003837.1:CDS
AATTCTGTCTGACAATAACA+AGG 0.633743 1:-62648817 MsaT003837.1:CDS
TAACTGCTTCCATTTGAATG+TGG 0.640823 1:+62634285 None:intergenic
GAAGTTCAAAGAGTACCGAT+TGG 0.642496 1:-62631420 MsaT003837.1:CDS
TGTATTCTAGCGCATACCAT+GGG 0.645213 1:-62646942 MsaT003837.1:CDS
TGTAATGGTAGTTCATCCGA+AGG 0.646275 1:-62647581 MsaT003837.1:CDS
GATCCTCCCAAATCTCCACT+GGG 0.648430 1:-62648699 MsaT003837.1:CDS
GGCTGCAGGTTTGAATATGG+AGG 0.648871 1:-62648796 MsaT003837.1:CDS
TGCCGGAATAAGATTCATGT+GGG 0.649694 1:-62647018 MsaT003837.1:CDS
CTGTGGGGAATGTGCCCGGG+TGG 0.650215 1:-62631220 MsaT003837.1:CDS
TAAGTGTCAGCAAATGTGCA+AGG 0.654843 1:+62631277 None:intergenic
CCATTTGCAAAATCCCAGGG+TGG 0.656250 1:+62637491 None:intergenic
AGCTTTGCTGAAATGCTCGG+AGG 0.660385 1:+62647473 None:intergenic
TGTGCTACATAATTGGAGGA+CGG 0.660387 1:-62643107 MsaT003837.1:CDS
CTCACCATGAGTTCTGCCGT+GGG 0.669063 1:-62636555 MsaT003837.1:CDS
AGCAACCGATAAGCAAACAC+AGG 0.669991 1:+62634605 None:intergenic
TCTGTTACAAGAAAACGAAG+AGG 0.670435 1:-62631508 MsaT003837.1:CDS
TCAAGAATCCAAAATTCAGG+GGG 0.682095 1:+62652550 None:intergenic
TACCACGAAGTGGAAAGCGA+GGG 0.687396 1:-62636465 MsaT003837.1:CDS
TCACCCAGTGGAGATTTGGG+AGG 0.690550 1:+62648696 None:intergenic
AAGCACGTGAAAGACCGAGA+TGG 0.695684 1:-62641680 MsaT003837.1:intron
CATCACACACAAGAATGTCA+GGG 0.697112 1:+62639394 None:intergenic
AAGTACGTTTGAAACACAGG+AGG 0.710544 1:-62649281 MsaT003837.1:CDS
GGTGATGATATTGAACAGAG+AGG 0.728660 1:-62648678 MsaT003837.1:CDS
TGTTCAATATCATCACCCAG+TGG 0.766858 1:+62648684 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 62631194 62652572 62631194 ID=MsaG003837
Chr1 mRNA 62631194 62652572 62631194 ID=MsaT003837.1;Parent=MsaG003837
Chr1 exon 62631194 62631560 62631194 ID=MsaT003837.1.exon22;Parent=MsaT003837.1
Chr1 CDS 62631194 62631560 62631194 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62634240 62634487 62634240 ID=MsaT003837.1.exon21;Parent=MsaT003837.1
Chr1 CDS 62634240 62634487 62634240 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62634565 62634643 62634565 ID=MsaT003837.1.exon20;Parent=MsaT003837.1
Chr1 CDS 62634565 62634643 62634565 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62635801 62636004 62635801 ID=MsaT003837.1.exon19;Parent=MsaT003837.1
Chr1 CDS 62635801 62636004 62635801 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62636433 62636505 62636433 ID=MsaT003837.1.exon18;Parent=MsaT003837.1
Chr1 CDS 62636433 62636505 62636433 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62636535 62636658 62636535 ID=MsaT003837.1.exon17;Parent=MsaT003837.1
Chr1 CDS 62636535 62636658 62636535 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62637083 62637144 62637083 ID=MsaT003837.1.exon16;Parent=MsaT003837.1
Chr1 CDS 62637083 62637144 62637083 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62637389 62637521 62637389 ID=MsaT003837.1.exon15;Parent=MsaT003837.1
Chr1 CDS 62637389 62637521 62637389 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62638744 62639047 62638744 ID=MsaT003837.1.exon14;Parent=MsaT003837.1
Chr1 CDS 62638744 62639047 62638744 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62639132 62639187 62639132 ID=MsaT003837.1.exon13;Parent=MsaT003837.1
Chr1 CDS 62639132 62639187 62639132 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62639272 62639421 62639272 ID=MsaT003837.1.exon12;Parent=MsaT003837.1
Chr1 CDS 62639272 62639421 62639272 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62641654 62641689 62641654 ID=MsaT003837.1.exon11;Parent=MsaT003837.1
Chr1 CDS 62641654 62641689 62641654 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62643024 62643206 62643024 ID=MsaT003837.1.exon10;Parent=MsaT003837.1
Chr1 CDS 62643024 62643206 62643024 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62646923 62647042 62646923 ID=MsaT003837.1.exon9;Parent=MsaT003837.1
Chr1 CDS 62646923 62647042 62646923 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62647460 62647675 62647460 ID=MsaT003837.1.exon8;Parent=MsaT003837.1
Chr1 CDS 62647460 62647675 62647460 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62647756 62647846 62647756 ID=MsaT003837.1.exon7;Parent=MsaT003837.1
Chr1 CDS 62647756 62647846 62647756 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62648501 62648720 62648501 ID=MsaT003837.1.exon6;Parent=MsaT003837.1
Chr1 CDS 62648501 62648720 62648501 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62648781 62648946 62648781 ID=MsaT003837.1.exon5;Parent=MsaT003837.1
Chr1 CDS 62648781 62648946 62648781 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62649260 62649343 62649260 ID=MsaT003837.1.exon4;Parent=MsaT003837.1
Chr1 CDS 62649260 62649343 62649260 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62651651 62651764 62651651 ID=MsaT003837.1.exon3;Parent=MsaT003837.1
Chr1 CDS 62651651 62651764 62651651 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62652004 62652112 62652004 ID=MsaT003837.1.exon2;Parent=MsaT003837.1
Chr1 CDS 62652004 62652112 62652004 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Chr1 exon 62652532 62652572 62652532 ID=MsaT003837.1.exon1;Parent=MsaT003837.1
Chr1 CDS 62652532 62652572 62652532 ID=cds.MsaT003837.1;Parent=MsaT003837.1
Gene Sequence

>MsaT003837.1

CCCCCTGAATTTTGGATTCTTGATGATTGGGACTATATGTTCAAGTTTTCTTATTTGCCTCTATCATCCCCTTCCACTTTCCTTGAATACTGGTTTAACTTTGTTTTTTTGCCCCATATGGCATCGCTATTGTGCATGGGTCCTGTGATTGTGGAAGAAATTGATGATATTGATGGCAATTCTACCGATCCATTTGTTGCAGCAGCCATTGCTAATGAAAAAGAATTAGATCTTTCTGAGGAGCAAAGAAGACAATTTAAAAAGGTCAAAGAAGAGGATGATGCAATTGTTGATAGGAAGCTTCAAGTACGTTTGAAACACAGGAGGCATCGAAAAAAAAGTAAACAGCGAGAAACAAGTACACCTATCCTGTCGATGGAGAGCCATGTACAGAAGTCTTCATCTGTTGATCAATTTAACCCTGATACAAAGGAAGGAACTAGCGATGAAGGGGAAATTCTGTCTGACAATAACAAGGCTGCAGGTTTGAATATGGAGGCCACTAAAATTAAAGATCCTCCCAAATCTCCACTGGGTGATGATATTGAACAGAGAGGAACCAAGCGTCTAAATGACGGTGAGCTTGATGCTGATAAAAAGAAGGGCCGGGCTGATATCGTCAACAGTGACGATGATATACCCGTTTCCAGTTCTGGTAGTAGTGATTCAGATGACTCAGACGACTCAGACGATTCAGACGATTCAGATGATTCAGAGATAAATGTTTCAATAAGCACTAAACGAAGACGCAAAAAGAAGATTAGGAGGATACTTGATGACACTGAATTGGGAGAAGAAACAAAAAAGAAAATAGCAATTGAAAAGGAACGTCAAGAACGCCTGAAGTCTTTGAGAGTACAGTTTTCTGCTTCATCGCTCGACACTATCTTTTCTGGCTGTAATGGTAGTTCATCCGAAGGTGCAAGCGTTGAAATTCTTGGTGATGCACTGGCAGGTTATATAGTGAATGTTGTGAGAGAAAAAGGTGAAGAAGCGGTTAGAATACCTCCGAGCATTTCAGCAAAGCTGAAAGCCCATCAGATTGCCGGAATAAGATTCATGTGGGAAAATATAATACAGTCAATCAGAAAAGTTAAGTCTGGAGATAAAGGTCTAGGGTGTATTCTAGCGCATACCATGGGCCTGGGTAAAACATTTCAGGTAATAGCTTTCTTGTATACGGCAATGAGAAGTGTTGATTTGGGTTTAAGAACTGCACTTATAGTCACACCTGTAAATGTGCTACATAATTGGAGGACGGAGTTCATCAAATGGGCACCATCAGAATTAAAGCGACTAAAGGTCTTCATGCTGGAAGATGTATCTAGGTTTGTTTGTTATTTTACCGAGATGGCCAGAGAACTTTGCCATGCTTTGCAGGATGGCCCTGACATTCTTGTGTGTGATGAAGCCCATATCATTAAAAATACTAAGGCTGACGTTACTCATGCCTTGAAACAAGTAAAGTGCCAGAGAAGAATTGCACTTACAGGATCACCTCTTCAAAACAATCTCATGGAATATTATTGTATGGTTGATTTTGTACGAGAAGGTTTTCTTGGAAGCAGTCATGAGTTTAGGAACCGCTTCCAAAATCCTATAGAGAATGGTCAACACACTAATTCCACTCAGACTGATGTAAAAATTATGAACCAAAGGTCTCACATCCTCTATGAACAATTAAAAGGCTTTGTCCAAAGAATGGACATGAATGTTGTGAAGAAGGACCTACCGCCCAAAACTGTTTTCGTGATAACAGTCAAGCTTTCTCCCCTACAACGAAAATTGTACAAGAGATTCATTGACGTGCATGGGTTCTCTAATGTTAAGGAAAATCAGGAAAATTTAAGAAAGAGGAGTTTTTTTGCTGGGTATCAGGCATTAGCTCGGATATGGAACCACCCTGGGATTTTGCAAATGGCAAAAGAAGACAAGGAATGTGTTAGACCTGAAGATGCTGTTGAGAATTTACTTGTTGATGATATCTCAAGTGATGATTCCGATTCTAATGTGCTTGCTGGAGAGAAGTTGAAGTATACAAATGATTTGCCGCCAAGGAAGGATGGTAATGGATTTTTCATAAAGGGCTGGTGGAAAGATATTCTTCAGGGCAAAATTTATAAAGAGATTGATCAAAGTGGCAAAATGGTTTTACTAATTGATATACTCACCATGAGTTCTGCCGTGGGTGATAAGGTATTAGTTTTTAAGCTATATCTCTCAAAGCTACCACGAAGTGGAAAGCGAGGGAAGCTGTGGAAGAAGGGAAGAGATTGGTATAGGCTGGATGGAAGGACAGAGAGCTCGGAAAGGCAGAAGCTTGTTGAGAGATTTAATGAGCCTCTGAATAAAAGGGTTAAATGCACACTTATTTCAACCCGAGCAGGCTCTTTGGGTATTAATCTTCATGCAGCTAATCGTGTTGTTATAGTTGATGGTTCTTGGAATCCAACATATGATCTTCAGGCTATCTATCGAGCTTGGAGGTATGGGCAGAAAAAGCCTGTGTTTGCTTATCGGTTGCTGGCTCATGGAACTATGGAAGAGAAAATATATAAGCGCCAGGTTACAAAAGAGGGGCTTGCTGCTAGAGTGGTCGATAGACAACAGGTGCATAGGACCATATCTAAAGAAGAAATGCTGCATCTCTTTGAATTTGGTGATGACGAGAATCCTGAGACTTTGGCTGAACTAAGTGAACAAAGTAATCCGATTTTGGCCGGGGATTCACTGAAACATACAGTACCACATTCAAATGGAAGCAGTTATTCTGATAAGTTAATGGAAAGCTTACTAGGCAAGCATCATCCCCGGTGGATTGCCAATTATCATTTACATGAATCTCTGTTACAAGAAAACGAAGAGGAAAAGCTATCAAAAGAGGAGCAAGATATGGCTTGGGAGGTGTATCGCAAATCGCTGGAATGGGAAGAAGTTCAAAGAGTACCGATTGGTGAGTCTGTGCCTGATCCAAAGCCAGAAGTGTCAAAGGCAGAAAACGAAAAACCTGAATTAGAAACTTGGCAGCTTTCAACTAAGCTGAGAAATCGTTTCACAAAGCGGCAATGCACCAACCTTGCACATTTGCTGACACTTAGAAGCCAGAGAATAAAAATTGGGGGCTATACAGTCTGTGGGGAATGTGCCCGGGTGGTAAGGTGGGAAGACTTGAAGAAATAA
Protein sequence

>MsaT003837.1

PPEFWILDDWDYMFKFSYLPLSSPSTFLEYWFNFVFLPHMASLLCMGPVIVEEIDDIDGNSTDPFVAAAIANEKELDLSEEQRRQFKKVKEEDDAIVDRKLQVRLKHRRHRKKSKQRETSTPILSMESHVQKSSSVDQFNPDTKEGTSDEGEILSDNNKAAGLNMEATKIKDPPKSPLGDDIEQRGTKRLNDGELDADKKKGRADIVNSDDDIPVSSSGSSDSDDSDDSDDSDDSDDSEINVSISTKRRRKKKIRRILDDTELGEETKKKIAIEKERQERLKSLRVQFSASSLDTIFSGCNGSSSEGASVEILGDALAGYIVNVVREKGEEAVRIPPSISAKLKAHQIAGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRTEFIKWAPSELKRLKVFMLEDVSRFVCYFTEMARELCHALQDGPDILVCDEAHIIKNTKADVTHALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTQTDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRKLYKRFIDVHGFSNVKENQENLRKRSFFAGYQALARIWNHPGILQMAKEDKECVRPEDAVENLLVDDISSDDSDSNVLAGEKLKYTNDLPPRKDGNGFFIKGWWKDILQGKIYKEIDQSGKMVLLIDILTMSSAVGDKVLVFKLYLSKLPRSGKRGKLWKKGRDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPETLAELSEQSNPILAGDSLKHTVPHSNGSSYSDKLMESLLGKHHPRWIANYHLHESLLQENEEEKLSKEEQDMAWEVYRKSLEWEEVQRVPIGESVPDPKPEVSKAENEKPELETWQLSTKLRNRFTKRQCTNLAHLLTLRSQRIKIGGYTVCGECARVVRWEDLKK*