Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG003869 | XP_013468984.1 | 95.411 | 414 | 17 | 1 | 1 | 414 | 1 | 412 | 0.0 | 761 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG003869 | sp|Q99090|CPRF2_PETCR | 54.460 | 426 | 157 | 12 | 1 | 414 | 1 | 401 | 5.96e-118 | 352 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG003869 | tr|A0A072VN13|A0A072VN13_MEDTR | 95.411 | 414 | 17 | 1 | 1 | 414 | 1 | 412 | 0.0 | 761 |
| Gene ID | Type | Classification |
|---|---|---|
| MsaG003869 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsaG000223 | MsaG003869 | 0.822371 | 4.325805e-53 | 1.013238e-50 |
| MsaG000532 | MsaG003869 | 0.814598 | 2.454349e-51 | 4.696464e-49 |
| MsaG001134 | MsaG003869 | 0.836839 | 1.354391e-56 | 4.794283e-54 |
| MsaG001810 | MsaG003869 | 0.803011 | 7.186496e-49 | 1.040467e-46 |
| MsaG003869 | MsaG005897 | 0.822808 | 3.427214e-53 | 8.122827e-51 |
| MsaG003869 | MsaG006699 | 0.804045 | 4.396266e-49 | 6.519406e-47 |
| MsaG003869 | MsaG007455 | 0.838926 | 3.962145e-57 | 1.495721e-54 |
| MsaG003869 | MsaG009707 | 0.848467 | 1.139441e-59 | 5.860853e-57 |
| MsaG003869 | MsaG018798 | 0.856077 | 7.961100e-62 | 5.348143e-59 |
| MsaG003869 | MsaG020852 | 0.815643 | 1.441677e-51 | 2.832724e-49 |
| MsaG003869 | MsaG033066 | 0.811397 | 1.225352e-50 | 2.165228e-48 |
| MsaG003869 | MsaG034387 | 0.813206 | 4.956886e-51 | 9.160130e-49 |
| MsaG003869 | MsaG044129 | 0.838811 | 4.240382e-57 | 1.594983e-54 |
| MsaG003869 | MsaG001982 | 0.823294 | 2.643586e-53 | 6.348402e-51 |
| MsaG003869 | MsaG019458 | 0.862089 | 1.283099e-63 | 1.080549e-60 |
| MsaG003869 | MsaG034900 | 0.817041 | 7.042766e-52 | 1.434155e-49 |
| MsaG003869 | MsaG037359 | 0.802634 | 8.590135e-49 | 1.232984e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG003869 | MtrunA17_Chr1g0190761 | 95.411 | 414 | 17 | 1 | 1 | 414 | 1 | 412 | 0.0 | 761 |
| MsaG003869 | MtrunA17_Chr7g0274141 | 54.839 | 403 | 161 | 9 | 1 | 401 | 1 | 384 | 1.43e-121 | 358 |
| MsaG003869 | MtrunA17_Chr3g0139301 | 52.593 | 135 | 57 | 4 | 177 | 307 | 96 | 227 | 2.11e-30 | 118 |
| MsaG003869 | MtrunA17_Chr1g0147491 | 59.504 | 121 | 45 | 2 | 180 | 300 | 143 | 259 | 4.76e-27 | 110 |
| MsaG003869 | MtrunA17_Chr3g0139571 | 59.459 | 74 | 30 | 0 | 209 | 282 | 1 | 74 | 1.61e-17 | 77.0 |
| MsaG003869 | MtrunA17_Chr4g0035414 | 41.304 | 92 | 54 | 0 | 208 | 299 | 28 | 119 | 3.60e-14 | 69.7 |
| MsaG003869 | MtrunA17_Chr7g0225661 | 41.346 | 104 | 55 | 1 | 179 | 282 | 59 | 156 | 7.66e-14 | 69.7 |
| MsaG003869 | MtrunA17_Chr8g0341311 | 45.055 | 91 | 45 | 1 | 192 | 282 | 61 | 146 | 8.02e-14 | 69.7 |
| MsaG003869 | MtrunA17_Chr3g0144941 | 38.043 | 92 | 57 | 0 | 208 | 299 | 28 | 119 | 1.53e-13 | 68.2 |
| MsaG003869 | MtrunA17_Chr6g0456061 | 47.297 | 74 | 39 | 0 | 210 | 283 | 90 | 163 | 2.11e-13 | 68.9 |
| MsaG003869 | MtrunA17_Chr8g0378901 | 31.092 | 119 | 79 | 1 | 181 | 299 | 9 | 124 | 1.73e-12 | 65.1 |
| MsaG003869 | MtrunA17_Chr1g0155551 | 30.573 | 157 | 89 | 4 | 180 | 323 | 7 | 156 | 1.93e-11 | 62.0 |
| MsaG003869 | MtrunA17_Chr8g0373571 | 43.529 | 85 | 46 | 1 | 194 | 278 | 248 | 330 | 2.21e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG003869 | AT5G28770.2 | 45.185 | 405 | 126 | 15 | 1 | 402 | 1 | 312 | 1.35e-75 | 238 |
| MsaG003869 | AT5G28770.1 | 44.444 | 405 | 122 | 16 | 1 | 402 | 1 | 305 | 7.15e-71 | 226 |
| MsaG003869 | AT5G28770.3 | 48.944 | 284 | 86 | 10 | 1 | 283 | 1 | 226 | 7.93e-56 | 185 |
| MsaG003869 | AT4G02640.3 | 40.549 | 328 | 150 | 7 | 1 | 299 | 1 | 312 | 1.20e-49 | 173 |
| MsaG003869 | AT4G02640.2 | 40.549 | 328 | 150 | 7 | 1 | 299 | 1 | 312 | 1.33e-49 | 173 |
| MsaG003869 | AT4G02640.1 | 40.549 | 328 | 144 | 7 | 1 | 299 | 1 | 306 | 3.80e-49 | 172 |
| MsaG003869 | AT4G02640.4 | 40.549 | 328 | 144 | 7 | 1 | 299 | 1 | 306 | 4.79e-49 | 172 |
| MsaG003869 | AT3G54620.1 | 38.965 | 367 | 151 | 14 | 1 | 322 | 1 | 339 | 1.17e-43 | 157 |
| MsaG003869 | AT5G24800.1 | 44.444 | 189 | 92 | 5 | 139 | 318 | 51 | 235 | 5.52e-37 | 136 |
| MsaG003869 | AT5G28770.4 | 44.898 | 245 | 76 | 10 | 1 | 244 | 1 | 187 | 2.98e-33 | 124 |
| MsaG003869 | AT3G54620.3 | 37.057 | 367 | 141 | 16 | 1 | 322 | 1 | 322 | 7.08e-29 | 117 |
| MsaG003869 | AT2G18160.1 | 41.758 | 91 | 53 | 0 | 202 | 292 | 23 | 113 | 3.53e-14 | 70.9 |
| MsaG003869 | AT2G04038.1 | 43.617 | 94 | 48 | 1 | 189 | 282 | 58 | 146 | 6.61e-13 | 67.0 |
| MsaG003869 | AT1G75390.1 | 36.522 | 115 | 68 | 1 | 205 | 319 | 36 | 145 | 1.11e-12 | 66.6 |
| MsaG003869 | AT3G30530.1 | 37.864 | 103 | 60 | 1 | 180 | 282 | 55 | 153 | 2.72e-12 | 65.5 |
| MsaG003869 | AT1G13600.1 | 45.333 | 75 | 41 | 0 | 208 | 282 | 84 | 158 | 9.47e-12 | 64.3 |
| MsaG003869 | AT3G62420.1 | 32.692 | 104 | 60 | 1 | 207 | 310 | 22 | 115 | 1.48e-11 | 62.4 |
| MsaG003869 | AT5G15830.1 | 41.758 | 91 | 47 | 1 | 192 | 282 | 62 | 146 | 5.47e-11 | 62.0 |
Find 128 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGATGATCCACTTGTTGA+TGG | 0.223100 | 1:+63033202 | None:intergenic |
| GCATCTTTATCTTGTAATAT+AGG | 0.256635 | 1:+63033289 | None:intergenic |
| CCGCAGAATCAGTGTACTTT+TGG | 0.261444 | 1:+63031920 | None:intergenic |
| CCTACAACTGCTGCATTGTT+TGG | 0.276575 | 1:+63030990 | None:intergenic |
| TCCAACTTTAGTAGCATTAG+AGG | 0.290868 | 1:+63033643 | None:intergenic |
| GGCAAAACGGCACCGTCTTT+TGG | 0.308675 | 1:+63035462 | None:intergenic |
| TTGATTCAAACCTTCAGAAA+TGG | 0.321181 | 1:+63033613 | None:intergenic |
| TCTTGTGGACCTTCTCCTAA+TGG | 0.363682 | 1:-63030876 | MsaT003869.1:CDS |
| TATGCAGGATCTGTTCCTTC+TGG | 0.364918 | 1:-63033322 | MsaT003869.1:intron |
| GCAATTTACTGCTCTCCATT+AGG | 0.372962 | 1:+63030861 | None:intergenic |
| CTTTCTTCTTCTTGAGCGCC+TGG | 0.376215 | 1:+63032144 | None:intergenic |
| GTTGCACCGGGTGGCTAGCT+TGG | 0.383977 | 1:-63030937 | MsaT003869.1:CDS |
| TGCGGTGACCATAGGTTGTC+GGG | 0.393062 | 1:+63035636 | None:intergenic |
| CCAAACAATGCAGCAGTTGT+AGG | 0.408840 | 1:-63030990 | MsaT003869.1:CDS |
| TGATTCAAACCTTCAGAAAT+GGG | 0.409793 | 1:+63033614 | None:intergenic |
| CCGTTGATTCCGAAGAATAT+CGG | 0.415030 | 1:-63035419 | MsaT003869.1:CDS |
| TCCTCTAATGCTACTAAAGT+TGG | 0.420756 | 1:-63033644 | MsaT003869.1:CDS |
| ATGGGGATGCCAGCATTTGA+TGG | 0.424587 | 1:-63031167 | MsaT003869.1:CDS |
| GCAGGCTCATTTAACTGAGT+TGG | 0.425028 | 1:-63032122 | MsaT003869.1:CDS |
| GCGCCTGGCTGACTCTCTAT+TGG | 0.428094 | 1:+63032159 | None:intergenic |
| TGGTGCAGCATCGGCAAAAC+CGG | 0.428231 | 1:+63035482 | None:intergenic |
| ATTCATGTCACCGGCGGCGC+CGG | 0.438697 | 1:-63035612 | MsaT003869.1:CDS |
| CTTTAGGTTTCACAATTAAG+AGG | 0.441246 | 1:-63031982 | MsaT003869.1:intron |
| GAGACTGTGAAAAGAGTTAC+CGG | 0.441519 | 1:-63031230 | MsaT003869.1:CDS |
| CAGAACAGCCCGATATTCTT+CGG | 0.443037 | 1:+63035410 | None:intergenic |
| TCCACTTGTTGATGGCCTAA+TGG | 0.446126 | 1:+63033210 | None:intergenic |
| GGAAGCGCTGCGACTCATCT+TGG | 0.448544 | 1:+63035578 | None:intergenic |
| GAGGACTGTGGTCCATTCTC+AGG | 0.449150 | 1:+63033662 | None:intergenic |
| GCCACCGGAGGTGGTCCATT+GGG | 0.449839 | 1:+63035441 | None:intergenic |
| CGTTGATTCCGAAGAATATC+GGG | 0.456409 | 1:-63035418 | MsaT003869.1:CDS |
| AAACAGCTCCTCCGTTGCAC+CGG | 0.457579 | 1:-63030950 | MsaT003869.1:CDS |
| TTTGCCCAATGGACCACCTC+CGG | 0.460821 | 1:-63035445 | MsaT003869.1:CDS |
| GGCGGTATGGAAGGGATCGC+AGG | 0.461844 | 1:+63033256 | None:intergenic |
| GCGCTGCGGTTGCCATGACT+AGG | 0.462989 | 1:-63035365 | MsaT003869.1:CDS |
| TCTGAAGAGTAAGCTGAATC+AGG | 0.465092 | 1:-63035391 | MsaT003869.1:CDS |
| GAATCAACGGCCACCGGAGG+TGG | 0.465283 | 1:+63035432 | None:intergenic |
| GGCCACCGGAGGTGGTCCAT+TGG | 0.477571 | 1:+63035440 | None:intergenic |
| ATGAGAGTCAACAATGGGTT+GGG | 0.479222 | 1:-63031041 | MsaT003869.1:CDS |
| TTCTGCACAGGCGGTATGGA+AGG | 0.484341 | 1:+63033247 | None:intergenic |
| GGATTCATCGCCGGCGCCGC+CGG | 0.486207 | 1:+63035602 | None:intergenic |
| ATGCCTGACATGTCATCAAT+GGG | 0.494648 | 1:-63031185 | MsaT003869.1:CDS |
| CAGCTTCTTGCAGAAAGCGT+TGG | 0.498650 | 1:+63035544 | None:intergenic |
| GAGTCGCAGCGCTTCCGAAT+GGG | 0.498693 | 1:-63035571 | MsaT003869.1:CDS |
| AAAGCGTTGGAACGCCCATT+CGG | 0.499920 | 1:+63035557 | None:intergenic |
| ACGAAATCCCCGACAACCTA+TGG | 0.501904 | 1:-63035644 | MsaT003869.1:CDS |
| TCTTCGGAATCAACGGCCAC+CGG | 0.506977 | 1:+63035426 | None:intergenic |
| ATCCCCATTGATGACATGTC+AGG | 0.511654 | 1:+63031182 | None:intergenic |
| CTGCGGTGACCATAGGTTGT+CGG | 0.521113 | 1:+63035635 | None:intergenic |
| CATCTTCAGAAGCGGATTCG+TGG | 0.522135 | 1:-63030912 | MsaT003869.1:CDS |
| TGCATCTGCTGAATTGTCTG+AGG | 0.523554 | 1:+63031139 | None:intergenic |
| GCATCTGCTGAATTGTCTGA+GGG | 0.526766 | 1:+63031140 | None:intergenic |
| GAGGGGCTTCCATCAAATGC+TGG | 0.527926 | 1:+63031158 | None:intergenic |
| TTCCAACAAACAACATGGAT+AGG | 0.529412 | 1:-63035680 | None:intergenic |
| AACAGCTCCTCCGTTGCACC+GGG | 0.530036 | 1:-63030949 | MsaT003869.1:CDS |
| CATGCCTGACATGTCATCAA+TGG | 0.535358 | 1:-63031186 | MsaT003869.1:CDS |
| AGGTGGTCCATTGGGCAAAA+CGG | 0.537410 | 1:+63035449 | None:intergenic |
| ATGAAACAATGGGTTCAATC+CGG | 0.537486 | 1:+63031211 | None:intergenic |
| AAGCTAGCCACCCGGTGCAA+CGG | 0.537945 | 1:+63030939 | None:intergenic |
| CAGGCATGACATGAAACAAT+GGG | 0.540921 | 1:+63031201 | None:intergenic |
| TATGAGAGTCAACAATGGGT+TGG | 0.540959 | 1:-63031042 | MsaT003869.1:CDS |
| TACTGCTCTCCATTAGGAGA+AGG | 0.543224 | 1:+63030867 | None:intergenic |
| AAGAGGTGAAAATTCTACCT+TGG | 0.544049 | 1:-63031965 | MsaT003869.1:CDS |
| AGTTGTAGGTGGGAACAAGA+TGG | 0.544585 | 1:-63030976 | MsaT003869.1:CDS |
| CGCTGCGGTTGCCATGACTA+GGG | 0.544605 | 1:-63035364 | MsaT003869.1:intron |
| CTACTGACGTAAAACGAGTA+AGG | 0.544656 | 1:-63033120 | MsaT003869.1:CDS |
| GGATCTCAGCCCATTTCTGA+AGG | 0.545730 | 1:-63033623 | MsaT003869.1:intron |
| GGCATAGGATTAATAGATGT+GGG | 0.545925 | 1:+63031074 | None:intergenic |
| TCCTCTGTTGCTGACAACAC+CGG | 0.546501 | 1:-63035501 | MsaT003869.1:CDS |
| TGAGTCGCAGCGCTTCCGAA+TGG | 0.548231 | 1:-63035572 | MsaT003869.1:CDS |
| CATGAATCTGCGGTGACCAT+AGG | 0.554146 | 1:+63035628 | None:intergenic |
| AACAATGCAGCAGTTGTAGG+TGG | 0.555285 | 1:-63030987 | MsaT003869.1:CDS |
| TCTTTATCTTGTAATATAGG+TGG | 0.555696 | 1:+63033292 | None:intergenic |
| CAGAAGCGGATTCGTGGTGG+CGG | 0.557372 | 1:-63030906 | MsaT003869.1:CDS |
| GGAAGAAGAAGGAGAAGGTG+TGG | 0.558163 | 1:+63035521 | None:intergenic |
| TGGTCCATTCTCAGGAAAAG+TGG | 0.558279 | 1:+63033670 | None:intergenic |
| GCCGATGCTGCACCAAAAGA+CGG | 0.560794 | 1:-63035474 | MsaT003869.1:CDS |
| GTTGTAGGTGGGAACAAGAT+GGG | 0.562961 | 1:-63030975 | MsaT003869.1:CDS |
| TTTCCAATAGAGAGTCAGCC+AGG | 0.566133 | 1:-63032162 | MsaT003869.1:CDS |
| CCGATATTCTTCGGAATCAA+CGG | 0.569768 | 1:+63035419 | None:intergenic |
| CTAGCCACCCGGTGCAACGG+AGG | 0.575800 | 1:+63030942 | None:intergenic |
| AGGGATCGCAGGTGGTACCT+TGG | 0.576379 | 1:+63033267 | None:intergenic |
| TCAGCAACAGAGGAAGAAGA+AGG | 0.578164 | 1:+63035510 | None:intergenic |
| GCGCTCAAGAAGAAGAAAGC+AGG | 0.578810 | 1:-63032140 | MsaT003869.1:CDS |
| ACCGGTGTTGTCAGCAACAG+AGG | 0.579200 | 1:+63035500 | None:intergenic |
| TCTGCACAGGCGGTATGGAA+GGG | 0.579471 | 1:+63033248 | None:intergenic |
| TTTAACTGAGTTGGAAACAC+AGG | 0.582001 | 1:-63032113 | MsaT003869.1:intron |
| TGGCATAGGATTAATAGATG+TGG | 0.582245 | 1:+63031073 | None:intergenic |
| GCCCAATGGACCACCTCCGG+TGG | 0.585880 | 1:-63035442 | MsaT003869.1:CDS |
| TCCAACAAACAACATGGATA+GGG | 0.587093 | 1:-63035679 | None:intergenic |
| CATTCTCAGGAAAAGTGGCT+AGG | 0.587934 | 1:+63033675 | None:intergenic |
| GACATATATGATTGACAGCA+CGG | 0.588439 | 1:-63033146 | MsaT003869.1:CDS |
| TCAGGCATGACATGAAACAA+TGG | 0.593558 | 1:+63031200 | None:intergenic |
| ATTACAAGATAAAGATGCCA+AGG | 0.595359 | 1:-63033284 | MsaT003869.1:CDS |
| GTCTGATGATGACGAAGCTG+AGG | 0.596500 | 1:-63033173 | MsaT003869.1:CDS |
| AGCTCCTCCGTTGCACCGGG+TGG | 0.597935 | 1:-63030946 | MsaT003869.1:CDS |
| ATGATATGAGAGTCAACAAT+GGG | 0.599172 | 1:-63031046 | MsaT003869.1:CDS |
| TGTTGAAACGTTAAGAGCAA+AGG | 0.608038 | 1:-63031872 | MsaT003869.1:intron |
| GCCATTAGGCCATCAACAAG+TGG | 0.609169 | 1:-63033211 | MsaT003869.1:CDS |
| AGCGCTGCGACTCATCTTGG+AGG | 0.610597 | 1:+63035581 | None:intergenic |
| TCGGAATCAACGGCCACCGG+AGG | 0.611990 | 1:+63035429 | None:intergenic |
| GCTTGGAACATCTTCAGAAG+CGG | 0.612188 | 1:-63030920 | MsaT003869.1:CDS |
| CTCATATCATGACATGGCAT+AGG | 0.623120 | 1:+63031059 | None:intergenic |
| TCTGATGATGACGAAGCTGA+GGG | 0.626334 | 1:-63033172 | MsaT003869.1:CDS |
| CATCTTGGAGGATTCATCGC+CGG | 0.632617 | 1:+63035593 | None:intergenic |
| GATGTTCCAAGCTAGCCACC+CGG | 0.633541 | 1:+63030931 | None:intergenic |
| TCACCGCAGATTCATGTCAC+CGG | 0.635057 | 1:-63035621 | MsaT003869.1:CDS |
| ACAGAGGAAGAAGAAGGAGA+AGG | 0.637590 | 1:+63035516 | None:intergenic |
| GGTATGGAAGGGATCGCAGG+TGG | 0.640990 | 1:+63033259 | None:intergenic |
| CCAAAAGTACACTGATTCTG+CGG | 0.642477 | 1:-63031920 | MsaT003869.1:CDS |
| GCTGAATCAGGCATGCGCTG+CGG | 0.643579 | 1:-63035379 | MsaT003869.1:CDS |
| TGATGTGGATCGTCTTGCAC+AGG | 0.644197 | 1:+63031110 | None:intergenic |
| ACAATGCAGCAGTTGTAGGT+GGG | 0.644613 | 1:-63030986 | MsaT003869.1:CDS |
| ATAGGTGGATCGCTTCCAGA+AGG | 0.645523 | 1:+63033307 | None:intergenic |
| TGATGGCCTAATGGCAACAA+TGG | 0.646272 | 1:+63033219 | None:intergenic |
| GGTTGATAGAAATGATGATG+TGG | 0.646871 | 1:+63031095 | None:intergenic |
| GCGGTGACCATAGGTTGTCG+GGG | 0.657758 | 1:+63035637 | None:intergenic |
| ATCAGTAAGACGCTTTACCA+AGG | 0.660921 | 1:+63031948 | None:intergenic |
| TTGACTCTCATATCATGACA+TGG | 0.663706 | 1:+63031053 | None:intergenic |
| CTTCAGAAGCGGATTCGTGG+TGG | 0.671591 | 1:-63030909 | MsaT003869.1:CDS |
| CCGCCGGTGACATGAATCTG+CGG | 0.671643 | 1:+63035618 | None:intergenic |
| CCGCAGATTCATGTCACCGG+CGG | 0.672407 | 1:-63035618 | MsaT003869.1:CDS |
| TTAGTAGCATTAGAGGACTG+TGG | 0.673158 | 1:+63033650 | None:intergenic |
| CATCTGCTGAATTGTCTGAG+GGG | 0.674812 | 1:+63031141 | None:intergenic |
| CATGATATGAGAGTCAACAA+TGG | 0.678198 | 1:-63031047 | MsaT003869.1:CDS |
| GGTGGCGGTGTCGATTCTTG+TGG | 0.683085 | 1:-63030891 | MsaT003869.1:CDS |
| CATGGATAGGGTATTCTCAG+TGG | 0.691390 | 1:-63035667 | MsaT003869.1:CDS |
| CTGACGTAAAACGAGTAAGG+AGG | 0.694894 | 1:-63033117 | MsaT003869.1:intron |
| TGCCTGACATGTCATCAATG+GGG | 0.791811 | 1:-63031184 | MsaT003869.1:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 63030866 | 63035688 | 63030866 | ID=MsaG003869 |
| Chr1 | mRNA | 63030866 | 63035688 | 63030866 | ID=MsaT003869.1;Parent=MsaG003869 |
| Chr1 | exon | 63030866 | 63031267 | 63030866 | ID=MsaT003869.1.exon6;Parent=MsaT003869.1 |
| Chr1 | CDS | 63030866 | 63031267 | 63030866 | ID=cds.MsaT003869.1;Parent=MsaT003869.1 |
| Chr1 | exon | 63031873 | 63031998 | 63031873 | ID=MsaT003869.1.exon5;Parent=MsaT003869.1 |
| Chr1 | CDS | 63031873 | 63031998 | 63031873 | ID=cds.MsaT003869.1;Parent=MsaT003869.1 |
| Chr1 | exon | 63032114 | 63032189 | 63032114 | ID=MsaT003869.1.exon4;Parent=MsaT003869.1 |
| Chr1 | CDS | 63032114 | 63032189 | 63032114 | ID=cds.MsaT003869.1;Parent=MsaT003869.1 |
| Chr1 | exon | 63033118 | 63033337 | 63033118 | ID=MsaT003869.1.exon3;Parent=MsaT003869.1 |
| Chr1 | CDS | 63033118 | 63033337 | 63033118 | ID=cds.MsaT003869.1;Parent=MsaT003869.1 |
| Chr1 | exon | 63033624 | 63033720 | 63033624 | ID=MsaT003869.1.exon2;Parent=MsaT003869.1 |
| Chr1 | CDS | 63033624 | 63033720 | 63033624 | ID=cds.MsaT003869.1;Parent=MsaT003869.1 |
| Chr1 | exon | 63035365 | 63035688 | 63035365 | ID=MsaT003869.1.exon1;Parent=MsaT003869.1 |
| Chr1 | CDS | 63035365 | 63035688 | 63035365 | ID=cds.MsaT003869.1;Parent=MsaT003869.1 |
| Gene Sequence |
| Protein sequence |