AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG003873

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG003873 MtrunA17_Chr1g0190831 87.561 619 44 6 1 588 1 617 0.0 1068
MsaG003873 MtrunA17_Chr1g0185221 55.072 621 212 15 1 578 1 597 0.0 593
MsaG003873 MtrunA17_Chr7g0260191 53.081 633 227 14 1 582 1 614 0.0 589
MsaG003873 MtrunA17_Chr4g0025671 61.364 264 92 4 1 256 5 266 1.47e-105 341
MsaG003873 MtrunA17_Chr2g0321841 60.606 264 94 4 1 256 1 262 3.18e-103 334
MsaG003873 MtrunA17_Chr2g0321841 71.186 59 17 0 521 579 934 992 6.10e-18 88.2
MsaG003873 MtrunA17_Chr7g0258051 55.137 292 117 5 1 284 13 298 6.89e-101 319
MsaG003873 MtrunA17_Chr7g0258051 60.784 51 20 0 527 577 582 632 1.25e-11 67.4
MsaG003873 MtrunA17_Chr1g0173921 48.852 305 135 6 1 286 1 303 5.67e-88 293
MsaG003873 MtrunA17_Chr1g0173921 59.259 54 22 0 524 577 931 984 1.55e-12 70.9
MsaG003873 MtrunA17_Chr1g0170551 28.477 302 185 8 1 283 4 293 3.56e-27 117
MsaG003873 MtrunA17_Chr5g0419441 29.699 266 167 9 3 255 238 496 6.99e-25 109
MsaG003873 MtrunA17_Chr5g0402601 30.824 279 152 10 3 254 371 635 8.85e-25 109
MsaG003873 MtrunA17_Chr8g0386981 30.935 278 155 10 10 265 414 676 2.24e-24 108
MsaG003873 MtrunA17_Chr1g0202831 31.321 265 148 9 10 253 417 668 2.82e-23 104
MsaG003873 MtrunA17_Chr8g0384301 29.389 262 157 8 10 253 305 556 4.61e-23 103
MsaG003873 MtrunA17_Chr3g0130151 30.303 264 152 9 10 253 250 501 1.04e-22 102
MsaG003873 MtrunA17_Chr4g0051191 29.577 284 155 11 10 270 169 430 8.91e-22 98.2
MsaG003873 MtrunA17_Chr4g0038501 30.418 263 167 8 3 254 19 276 1.48e-21 99.8
MsaG003873 MtrunA17_Chr4g0038091 29.643 280 179 9 3 269 19 293 7.49e-21 97.4
MsaG003873 MtrunA17_Chr3g0133541 31.203 266 154 11 10 254 313 570 1.97e-20 95.5
MsaG003873 MtrunA17_Chr4g0052981 32.759 174 108 5 111 280 117 285 4.23e-20 92.0
MsaG003873 MtrunA17_Chr2g0288841 25.965 285 199 7 10 288 11 289 5.73e-20 92.8
MsaG003873 MtrunA17_Chr7g0272841 29.893 281 154 11 8 259 72 338 5.96e-20 94.0
MsaG003873 MtrunA17_Chr2g0317001 29.183 257 162 9 3 247 14 262 7.16e-20 94.0
MsaG003873 MtrunA17_Chr1g0205931 27.473 273 157 8 8 252 59 318 1.13e-19 93.2
MsaG003873 MtrunA17_Chr6g0487231 30.855 269 162 13 5 255 70 332 1.52e-19 90.5
MsaG003873 MtrunA17_Chr5g0424501 27.068 266 159 8 8 253 196 446 1.77e-19 91.7
MsaG003873 MtrunA17_Chr4g0000481 28.253 269 162 10 3 252 83 339 2.52e-19 90.1
MsaG003873 MtrunA17_Chr5g0424651 34.028 144 91 3 112 253 434 575 5.52e-19 90.9
MsaG003873 MtrunA17_Chr5g0424581 34.028 144 91 3 112 253 238 379 8.08e-19 89.0
MsaG003873 MtrunA17_Chr6g0479211 29.368 269 166 10 3 252 55 318 3.44e-18 85.9
MsaG003873 MtrunA17_Chr2g0322401 31.844 179 114 5 111 286 118 291 4.67e-18 86.7
MsaG003873 MtrunA17_Chr8g0375141 32.184 174 109 5 111 280 156 324 5.96e-18 85.9
MsaG003873 MtrunA17_Chr4g0052961 34.014 147 91 4 111 253 154 298 1.46e-17 84.7
MsaG003873 MtrunA17_Chr5g0424531 33.333 144 92 3 112 253 129 270 1.86e-17 83.2
MsaG003873 MtrunA17_Chr2g0286501 29.740 269 154 10 1 249 46 299 3.73e-17 85.9
MsaG003873 MtrunA17_Chr4g0008561 26.022 269 168 9 4 252 19 276 6.17e-17 84.7
MsaG003873 MtrunA17_Chr3g0115171 26.923 234 148 7 31 253 316 537 6.62e-17 84.0
MsaG003873 MtrunA17_Chr5g0409421 26.421 299 161 9 1 254 1 285 7.45e-17 83.6
MsaG003873 MtrunA17_Chr1g0173541 26.129 310 199 11 1 290 49 348 8.53e-17 83.6
MsaG003873 MtrunA17_Chr4g0059951 28.261 276 162 13 2 254 71 333 9.71e-17 83.6
MsaG003873 MtrunA17_Chr7g0245031 27.459 244 162 6 1 235 145 382 1.48e-16 82.8
MsaG003873 MtrunA17_Chr4g0059751 25.692 253 166 6 4 240 89 335 3.74e-16 80.9
MsaG003873 MtrunA17_Chr4g0000431 36.913 149 82 7 111 249 136 282 1.78e-15 80.1
MsaG003873 MtrunA17_Chr5g0402091 30.000 220 129 9 112 313 121 333 2.16e-15 78.2
MsaG003873 MtrunA17_Chr2g0293491 28.520 277 157 11 1 248 1 265 2.33e-15 77.0
MsaG003873 MtrunA17_Chr7g0257751 28.364 275 157 13 3 252 57 316 2.83e-15 79.0
MsaG003873 MtrunA17_Chr6g0450571 35.374 147 85 6 112 249 129 274 6.50e-15 78.2
MsaG003873 MtrunA17_Chr4g0025041 34.722 144 88 4 111 252 110 249 7.61e-15 76.6
MsaG003873 MtrunA17_Chr5g0406251 28.261 138 97 2 111 247 405 541 9.72e-15 77.4
MsaG003873 MtrunA17_Chr3g0117811 32.857 140 89 4 111 247 194 331 1.22e-14 75.9
MsaG003873 MtrunA17_Chr8g0387671 27.612 268 158 11 9 253 71 325 1.32e-14 76.6
MsaG003873 MtrunA17_Chr1g0211611 28.261 138 97 2 111 247 411 547 1.53e-14 76.6
MsaG003873 MtrunA17_Chr8g0385341 27.715 267 171 12 2 252 28 288 3.53e-14 75.5
MsaG003873 MtrunA17_Chr4g0051261 26.984 315 179 13 1 286 1 293 4.87e-14 73.2
MsaG003873 MtrunA17_Chr1g0200601 26.866 268 168 11 2 250 28 286 6.46e-14 74.3
MsaG003873 MtrunA17_Chr8g0369451 24.068 295 173 9 1 254 1 285 1.16e-13 73.6
MsaG003873 MtrunA17_Chr6g0450871 32.374 139 89 4 112 247 207 343 1.21e-13 72.8
MsaG003873 MtrunA17_Chr5g0447731 27.711 249 132 9 45 271 70 292 1.49e-13 71.6
MsaG003873 MtrunA17_Chr1g0190131 25.564 266 177 9 3 254 8 266 1.61e-13 71.2
MsaG003873 MtrunA17_Chr3g0143531 29.197 137 95 2 112 247 136 271 2.23e-13 71.2
MsaG003873 MtrunA17_Chr1g0170281 25.442 283 159 11 2 253 116 377 2.56e-13 72.8
MsaG003873 MtrunA17_Chr4g0001331 26.236 263 170 11 3 250 19 272 2.58e-13 72.4
MsaG003873 MtrunA17_Chr7g0267771 26.812 276 164 9 2 253 86 347 2.74e-13 72.4
MsaG003873 MtrunA17_Chr2g0333821 27.273 264 172 10 3 253 13 269 3.12e-13 72.0
MsaG003873 MtrunA17_Chr8g0374701 24.000 325 207 14 3 299 124 436 3.33e-13 72.4
MsaG003873 MtrunA17_Chr5g0432471 27.757 263 162 12 1 246 9 260 3.34e-13 72.0
MsaG003873 MtrunA17_Chr8g0380661 25.095 263 176 9 1 250 1 255 3.61e-13 70.9
MsaG003873 MtrunA17_Chr5g0445271 26.471 238 141 8 32 252 65 285 3.74e-13 70.5
MsaG003873 MtrunA17_Chr6g0449691 32.215 149 94 5 112 255 197 343 3.87e-13 72.0
MsaG003873 MtrunA17_Chr5g0402111 32.639 144 93 4 112 252 120 262 4.49e-13 70.5
MsaG003873 MtrunA17_Chr3g0123791 29.368 269 158 13 2 250 3 259 5.17e-13 70.9
MsaG003873 MtrunA17_Chr7g0244621 28.082 146 96 2 111 247 158 303 5.80e-13 70.9
MsaG003873 MtrunA17_Chr8g0345801 23.200 250 160 7 9 237 20 258 7.51e-13 68.9
MsaG003873 MtrunA17_Chr8g0346071 35.211 142 86 6 111 249 129 267 9.21e-13 70.5
MsaG003873 MtrunA17_Chr2g0276831 31.034 174 94 6 112 260 124 296 1.02e-12 70.1
MsaG003873 MtrunA17_Chr4g0075541 26.638 229 154 6 29 247 114 338 1.08e-12 70.1
MsaG003873 MtrunA17_Chr7g0248461 32.886 149 86 4 112 247 154 301 1.25e-12 69.7
MsaG003873 MtrunA17_Chr4g0059181 30.935 139 91 4 112 247 224 360 1.32e-12 69.7
MsaG003873 MtrunA17_Chr2g0277501 29.851 268 160 11 1 250 1 258 1.41e-12 69.3
MsaG003873 MtrunA17_Chr8g0384001 26.538 260 172 8 8 253 32 286 1.59e-12 70.5
MsaG003873 MtrunA17_Chr8g0348481 29.651 172 89 5 112 252 153 323 1.78e-12 69.3
MsaG003873 MtrunA17_Chr5g0402551 24.286 280 172 11 3 255 133 399 1.90e-12 70.1
MsaG003873 MtrunA17_Chr5g0397261 29.885 174 90 4 112 254 157 329 2.09e-12 68.9
MsaG003873 MtrunA17_Chr3g0090261 22.989 261 169 7 8 248 86 334 2.18e-12 68.9
MsaG003873 MtrunA17_Chr7g0244561 33.858 127 77 5 133 254 150 274 2.40e-12 69.3
MsaG003873 MtrunA17_Chr8g0346081 36.429 140 83 6 111 247 129 265 2.82e-12 68.9
MsaG003873 MtrunA17_Chr3g0129721 25.279 269 176 8 4 254 24 285 3.10e-12 67.8
MsaG003873 MtrunA17_Chr6g0483151 25.108 231 156 8 2 221 12 236 3.28e-12 68.6
MsaG003873 MtrunA17_Chr1g0176421 25.182 274 167 11 4 253 161 420 3.94e-12 69.3
MsaG003873 MtrunA17_Chr3g0132681 32.639 144 91 4 111 250 142 283 4.07e-12 67.4
MsaG003873 MtrunA17_Chr8g0381821 29.259 270 159 13 1 250 1 258 6.30e-12 67.4
MsaG003873 MtrunA17_Chr3g0101111 31.250 144 93 4 111 250 141 282 1.16e-11 65.9
MsaG003873 MtrunA17_Chr1g0205071 30.216 139 92 4 112 247 214 350 1.30e-11 66.6
MsaG003873 MtrunA17_Chr7g0244601 29.787 188 113 7 111 287 143 322 1.33e-11 67.4
MsaG003873 MtrunA17_Chr7g0225201 30.303 165 104 5 88 250 128 283 1.53e-11 65.9
MsaG003873 MtrunA17_Chr3g0098951 25.000 272 170 10 4 253 84 343 1.54e-11 67.0
MsaG003873 MtrunA17_Chr4g0065851 25.743 303 166 12 3 254 24 318 2.05e-11 66.6
MsaG003873 MtrunA17_Chr2g0282321 29.197 137 95 2 112 247 279 414 2.12e-11 66.2
MsaG003873 MtrunA17_Chr8g0385281 28.731 268 163 11 1 250 2 259 2.13e-11 65.9
MsaG003873 MtrunA17_Chr7g0269001 29.167 264 148 12 4 250 238 479 2.20e-11 66.6
MsaG003873 MtrunA17_Chr6g0453711 26.990 289 161 13 2 247 108 389 2.44e-11 66.6
MsaG003873 MtrunA17_Chr3g0115051 30.000 220 124 10 63 257 447 661 2.56e-11 66.6
MsaG003873 MtrunA17_Chr4g0013131 31.690 142 89 6 111 247 123 261 2.67e-11 66.2
MsaG003873 MtrunA17_Chr3g0130781 25.439 228 142 10 1 204 15 238 2.76e-11 66.2
MsaG003873 MtrunA17_Chr4g0047201 30.303 132 90 2 111 241 317 447 2.82e-11 66.2
MsaG003873 MtrunA17_Chr5g0426521 27.652 264 171 10 1 250 1 258 2.85e-11 65.1
MsaG003873 MtrunA17_Chr4g0045261 24.382 283 168 13 3 255 136 402 3.26e-11 66.2
MsaG003873 MtrunA17_Chr1g0157231 31.132 106 69 3 112 215 256 359 3.81e-11 65.1
MsaG003873 MtrunA17_Chr5g0441011 33.803 142 86 6 111 247 125 263 4.87e-11 65.1
MsaG003873 MtrunA17_Chr3g0107011 24.627 268 170 11 1 249 11 265 5.16e-11 65.1
MsaG003873 MtrunA17_Chr8g0378831 25.939 293 170 13 3 252 31 319 5.60e-11 64.7
MsaG003873 MtrunA17_Chr7g0218071 29.302 215 126 11 2 199 118 323 5.83e-11 65.5
MsaG003873 MtrunA17_Chr3g0107051 30.070 143 94 4 112 250 133 273 6.54e-11 64.7
MsaG003873 MtrunA17_Chr3g0131061 27.715 267 167 10 1 250 1 258 6.58e-11 64.3
MsaG003873 MtrunA17_Chr2g0312561 26.316 209 125 8 2 191 41 239 6.95e-11 64.3
MsaG003873 MtrunA17_Chr1g0202101 25.735 136 100 1 111 246 393 527 8.18e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG003873 AT3G04810.2 54.619 617 227 18 1 581 1 600 0.0 575
MsaG003873 AT3G04810.1 54.619 617 227 18 1 581 1 600 0.0 575
MsaG003873 AT3G04810.3 54.619 617 227 18 1 581 1 600 0.0 575
MsaG003873 AT1G54510.4 53.376 622 227 15 1 585 1 596 0.0 556
MsaG003873 AT1G54510.2 53.376 622 227 15 1 585 1 596 0.0 556
MsaG003873 AT1G54510.1 53.376 622 227 15 1 585 1 596 0.0 556
MsaG003873 AT1G54510.3 53.376 622 227 15 1 585 1 596 0.0 556
MsaG003873 AT5G28290.1 54.711 605 217 18 1 586 1 567 6.82e-179 518
MsaG003873 AT5G28290.2 54.711 605 217 18 1 586 1 567 6.82e-179 518
MsaG003873 AT3G63280.2 50.083 603 224 18 1 578 1 551 2.24e-176 511
MsaG003873 AT3G63280.3 50.083 603 224 18 1 578 1 551 2.24e-176 511
MsaG003873 AT3G63280.1 50.083 603 224 18 1 578 1 551 2.24e-176 511
MsaG003873 AT3G63280.4 50.083 603 224 18 1 578 55 605 2.95e-175 510
MsaG003873 AT5G28290.3 53.177 598 222 16 1 586 1 552 4.89e-174 505
MsaG003873 AT3G44200.2 61.742 264 91 4 1 256 5 266 1.15e-107 345
MsaG003873 AT3G44200.2 66.129 62 21 0 518 579 876 937 9.47e-19 91.3
MsaG003873 AT3G44200.1 61.742 264 91 4 1 256 5 266 1.15e-107 345
MsaG003873 AT3G44200.1 66.129 62 21 0 518 579 876 937 9.47e-19 91.3
MsaG003873 AT3G20860.1 59.091 264 97 5 1 256 1 261 5.19e-99 307
MsaG003873 AT3G20860.1 48.889 90 41 2 493 577 313 402 9.66e-13 70.9
MsaG003873 AT1G54510.5 44.124 451 195 12 164 585 1 423 7.28e-92 290
MsaG003873 AT3G12200.1 41.472 299 149 7 1 275 16 312 8.33e-65 222
MsaG003873 AT3G12200.2 40.129 309 149 8 1 275 16 322 1.22e-61 214
MsaG003873 AT3G12200.4 43.952 248 117 6 48 275 1 246 1.73e-56 198
MsaG003873 AT3G12200.3 43.498 223 104 6 73 275 20 240 3.85e-46 170
MsaG003873 AT1G53570.6 30.943 265 151 9 10 254 220 472 3.58e-25 110
MsaG003873 AT1G53570.7 30.943 265 151 9 10 254 220 472 3.64e-25 110
MsaG003873 AT1G53570.1 30.566 265 152 8 10 254 220 472 5.21e-25 110
MsaG003873 AT1G53570.4 30.566 265 152 8 10 254 220 472 5.48e-25 110
MsaG003873 AT1G53570.2 30.566 265 152 8 10 254 220 472 5.63e-25 110
MsaG003873 AT1G53570.3 30.566 265 152 8 10 254 220 472 5.63e-25 110
MsaG003873 AT1G50240.3 29.588 267 162 7 1 253 3 257 2.47e-24 108
MsaG003873 AT1G50240.2 29.588 267 162 7 1 253 3 257 2.47e-24 108
MsaG003873 AT5G18700.1 29.779 272 170 10 1 261 1 262 1.10e-22 103
MsaG003873 AT1G69220.1 30.000 260 162 10 3 249 248 500 2.33e-22 102
MsaG003873 AT5G66850.1 29.643 280 154 10 3 254 345 609 5.03e-22 101
MsaG003873 AT5G66850.2 29.643 280 154 10 3 254 345 609 5.46e-22 100
MsaG003873 AT4G29810.1 29.348 276 165 12 1 255 67 333 8.58e-22 97.8
MsaG003873 AT4G29810.2 29.348 276 165 12 1 255 76 342 1.30e-21 97.4
MsaG003873 AT3G06030.1 29.779 272 151 11 8 252 72 330 1.61e-20 96.3
MsaG003873 AT4G08500.1 30.233 258 158 9 10 253 339 588 1.71e-20 95.9
MsaG003873 AT3G07980.1 30.116 259 165 8 3 250 19 272 2.03e-20 96.7
MsaG003873 AT3G07980.2 29.658 263 169 8 3 254 19 276 2.20e-20 96.7
MsaG003873 AT3G13530.1 29.730 259 166 8 3 250 19 272 2.42e-20 96.3
MsaG003873 AT3G15220.1 28.462 260 174 8 3 254 14 269 5.40e-20 94.7
MsaG003873 AT1G63700.1 29.771 262 148 11 10 249 406 653 1.16e-19 94.0
MsaG003873 AT1G63700.2 29.771 262 148 11 10 249 406 653 1.16e-19 94.0
MsaG003873 AT1G69220.2 29.412 255 160 10 8 249 226 473 3.41e-19 92.4
MsaG003873 AT1G54960.1 29.389 262 161 10 10 252 74 330 5.75e-19 91.3
MsaG003873 AT1G54960.2 29.389 262 161 10 10 252 74 330 5.75e-19 91.3
MsaG003873 AT4G26070.2 29.779 272 169 10 1 255 65 331 1.38e-18 88.2
MsaG003873 AT4G26070.3 29.779 272 169 10 1 255 65 331 1.38e-18 88.2
MsaG003873 AT4G29810.3 28.731 268 161 12 1 247 76 334 1.41e-18 87.8
MsaG003873 AT4G26070.4 29.927 274 166 11 1 255 64 330 1.49e-18 87.8
MsaG003873 AT3G61960.2 23.985 271 174 7 4 253 10 269 1.63e-18 89.7
MsaG003873 AT4G26070.5 29.927 274 166 11 1 255 52 318 1.70e-18 87.8
MsaG003873 AT3G61960.1 23.985 271 174 7 4 253 10 269 1.80e-18 89.7
MsaG003873 AT3G53930.1 26.022 269 177 7 4 255 20 283 1.96e-18 89.7
MsaG003873 AT3G53930.2 26.022 269 177 7 4 255 20 283 1.98e-18 89.7
MsaG003873 AT5G67080.1 34.459 148 89 4 112 252 123 269 2.32e-18 87.4
MsaG003873 AT1G53165.1 28.077 260 175 8 3 254 14 269 2.88e-18 89.4
MsaG003873 AT1G09000.2 29.104 268 154 10 10 252 75 331 3.06e-18 89.0
MsaG003873 AT1G53165.2 28.077 260 175 8 3 254 14 269 3.31e-18 89.0
MsaG003873 AT1G53165.3 28.077 260 175 8 3 254 14 269 3.47e-18 89.0
MsaG003873 AT1G09000.1 29.104 268 154 10 10 252 75 331 3.80e-18 89.0
MsaG003873 AT5G56580.1 29.779 272 168 13 2 255 68 334 1.14e-17 85.5
MsaG003873 AT3G08720.1 28.788 264 156 9 1 245 137 387 1.96e-17 85.9
MsaG003873 AT3G08720.3 28.788 264 156 9 1 245 137 387 1.96e-17 85.9
MsaG003873 AT3G08720.4 28.788 264 156 9 1 245 137 387 1.96e-17 85.9
MsaG003873 AT3G08720.2 28.788 264 156 9 1 245 137 387 1.96e-17 85.9
MsaG003873 AT1G53570.5 27.985 268 129 10 10 254 220 446 2.26e-17 86.3
MsaG003873 AT2G37840.1 25.461 271 176 8 4 255 12 275 3.39e-17 85.9
MsaG003873 AT4G36950.1 34.014 147 89 4 112 252 121 265 8.31e-17 82.4
MsaG003873 AT4G08470.1 30.638 235 137 8 31 252 336 557 9.06e-17 84.0
MsaG003873 AT4G08470.3 30.638 235 137 8 31 252 254 475 1.02e-16 83.6
MsaG003873 AT1G18350.1 31.365 271 152 12 5 253 46 304 1.44e-16 81.3
MsaG003873 AT1G48490.4 25.887 282 163 9 1 243 826 1100 2.81e-16 83.2
MsaG003873 AT1G48490.3 25.714 280 166 9 1 243 825 1099 2.91e-16 83.2
MsaG003873 AT1G48490.2 25.714 280 166 9 1 243 825 1099 2.91e-16 83.2
MsaG003873 AT1G48490.1 25.714 280 166 9 1 243 825 1099 2.91e-16 83.2
MsaG003873 AT3G50310.1 31.928 166 93 6 112 259 121 284 3.01e-16 80.9
MsaG003873 AT3G08730.1 27.490 251 162 7 1 240 131 372 3.22e-16 82.0
MsaG003873 AT3G08730.2 27.490 251 162 7 1 240 131 372 3.22e-16 82.0
MsaG003873 AT4G08480.1 33.103 145 92 3 112 253 614 756 4.66e-16 82.4
MsaG003873 AT4G10730.2 37.838 148 82 5 111 249 139 285 5.94e-16 82.0
MsaG003873 AT4G10730.1 37.838 148 82 5 111 249 159 305 5.98e-16 82.0
MsaG003873 AT4G12020.2 32.432 148 86 4 112 253 1739 1878 7.69e-16 82.0
MsaG003873 AT4G12020.4 32.432 148 86 4 112 253 1731 1870 8.02e-16 82.0
MsaG003873 AT4G12020.5 32.432 148 86 4 112 253 1664 1803 8.53e-16 82.0
MsaG003873 AT1G79640.1 37.162 148 83 6 111 249 125 271 9.85e-16 81.3
MsaG003873 AT1G79640.5 37.162 148 83 6 111 249 128 274 1.00e-15 81.3
MsaG003873 AT1G79640.2 37.162 148 83 6 111 249 125 271 1.04e-15 81.3
MsaG003873 AT1G79640.4 37.162 148 83 6 111 249 125 271 1.04e-15 81.3
MsaG003873 AT1G79640.3 37.162 148 83 6 111 249 125 271 1.04e-15 81.3
MsaG003873 AT1G79640.6 37.162 148 83 6 111 249 125 271 1.17e-15 80.9
MsaG003873 AT4G26070.1 32.512 203 123 8 1 194 65 262 1.70e-15 78.2
MsaG003873 AT2G34180.1 27.068 266 166 13 1 249 54 308 2.07e-15 79.7
MsaG003873 AT2G38490.1 39.583 144 79 6 112 250 140 280 9.40e-15 77.0
MsaG003873 AT4G19110.1 25.085 295 170 10 1 254 1 285 1.11e-14 77.0
MsaG003873 AT4G19110.2 25.085 295 170 10 1 254 1 285 1.27e-14 77.0
MsaG003873 AT5G39440.1 30.822 146 99 2 111 256 131 274 1.98e-14 76.6
MsaG003873 AT3G01490.1 33.094 139 88 4 112 247 243 379 2.66e-14 75.5
MsaG003873 AT3G10660.2 25.362 276 168 11 2 253 184 445 3.37e-14 76.3
MsaG003873 AT3G10660.1 25.362 276 168 11 2 253 184 445 3.37e-14 76.3
MsaG003873 AT2G32510.1 29.379 177 113 5 111 277 115 289 3.97e-14 74.7
MsaG003873 AT1G07150.2 28.063 253 170 6 10 252 15 265 4.45e-14 75.5
MsaG003873 AT4G04700.1 27.500 280 157 14 4 253 28 291 4.87e-14 75.1
MsaG003873 AT1G08650.1 25.379 264 181 8 3 253 14 274 7.22e-14 72.8
MsaG003873 AT4G04740.4 30.612 147 94 4 114 254 185 329 7.50e-14 74.7
MsaG003873 AT4G04740.6 30.612 147 94 4 114 254 185 329 7.50e-14 74.7
MsaG003873 AT4G04740.5 30.612 147 94 4 114 254 185 329 7.50e-14 74.7
MsaG003873 AT4G04740.3 30.612 147 94 4 114 254 185 329 7.50e-14 74.7
MsaG003873 AT4G04740.1 30.612 147 94 4 114 254 185 329 7.50e-14 74.7
MsaG003873 AT4G04740.7 30.612 147 94 4 114 254 185 329 7.50e-14 74.7
MsaG003873 AT1G07150.1 28.063 253 170 6 10 252 29 279 8.10e-14 74.7
MsaG003873 AT3G48750.1 28.777 278 153 12 1 247 1 264 8.55e-14 72.8
MsaG003873 AT4G04740.2 30.612 147 94 4 114 254 185 329 9.14e-14 74.7
MsaG003873 AT5G50000.1 32.192 146 92 5 112 254 217 358 1.02e-13 73.6
MsaG003873 AT4G35780.1 26.812 138 99 2 111 247 402 538 1.20e-13 74.3
MsaG003873 AT5G39420.1 28.230 209 136 8 2 199 103 308 1.26e-13 74.3
MsaG003873 AT5G04870.1 25.632 277 166 11 2 253 148 409 1.53e-13 73.9
MsaG003873 AT5G45430.2 24.765 319 170 11 1 267 1 301 2.44e-13 73.2
MsaG003873 AT5G45430.1 24.765 319 170 11 1 267 1 301 2.70e-13 72.8
MsaG003873 AT1G78290.3 27.055 292 183 13 1 271 1 283 2.74e-13 72.0
MsaG003873 AT1G78290.2 27.055 292 183 13 1 271 1 283 2.74e-13 72.0
MsaG003873 AT4G12020.10 30.769 143 79 3 112 253 1731 1854 2.79e-13 73.9
MsaG003873 AT4G12020.3 30.769 143 79 3 112 253 1739 1862 2.89e-13 73.9
MsaG003873 AT1G23700.2 27.957 279 148 16 4 253 16 270 3.14e-13 72.0
MsaG003873 AT4G40010.1 28.731 268 163 13 1 250 1 258 4.72e-13 71.2
MsaG003873 AT1G23700.3 27.957 279 148 16 4 253 16 270 5.36e-13 72.0
MsaG003873 AT1G05100.1 31.034 174 111 7 111 277 119 290 5.38e-13 70.9
MsaG003873 AT5G40440.4 33.562 146 90 6 112 252 196 339 5.54e-13 72.0
MsaG003873 AT5G40440.1 33.562 146 90 6 112 252 196 339 5.54e-13 72.0
MsaG003873 AT1G23700.1 27.957 279 148 16 4 253 16 270 5.78e-13 71.6
MsaG003873 AT5G40440.5 32.886 149 93 6 112 255 114 260 5.90e-13 71.6
MsaG003873 AT4G31170.7 22.467 227 152 5 34 247 167 382 6.02e-13 71.6
MsaG003873 AT4G31170.6 22.467 227 152 5 34 247 167 382 6.02e-13 71.6
MsaG003873 AT4G31170.5 22.467 227 152 5 34 247 167 382 6.02e-13 71.6
MsaG003873 AT4G31170.1 22.467 227 152 5 34 247 167 382 6.02e-13 71.6
MsaG003873 AT4G31170.2 22.467 227 152 5 34 247 167 382 6.02e-13 71.6
MsaG003873 AT4G31170.3 22.467 227 152 5 34 247 167 382 6.02e-13 71.6
MsaG003873 AT4G31170.8 22.467 227 152 5 34 247 167 382 6.02e-13 71.6
MsaG003873 AT1G74740.1 25.455 275 171 13 2 254 57 319 7.80e-13 71.6
MsaG003873 AT5G40440.6 33.562 146 90 6 112 252 178 321 7.81e-13 71.6
MsaG003873 AT5G40440.3 33.562 146 90 6 112 252 178 321 7.81e-13 71.6
MsaG003873 AT5G40440.2 33.562 146 90 6 112 252 178 321 7.81e-13 71.6
MsaG003873 AT1G30270.3 33.099 142 87 6 111 247 46 184 8.10e-13 70.9
MsaG003873 AT5G63650.1 28.866 291 170 13 1 273 1 272 1.02e-12 70.5
MsaG003873 AT1G30270.1 33.099 142 87 6 111 247 143 281 1.35e-12 70.9
MsaG003873 AT5G04510.2 31.507 146 83 5 111 243 156 297 1.48e-12 70.1
MsaG003873 AT1G30270.2 33.099 142 87 6 111 247 143 281 1.51e-12 70.5
MsaG003873 AT2G30040.1 32.394 142 94 2 112 252 130 270 1.69e-12 70.5
MsaG003873 AT5G58950.1 24.413 213 155 4 39 247 250 460 1.83e-12 70.5
MsaG003873 AT1G49580.1 24.262 305 193 10 5 283 151 443 1.96e-12 70.5
MsaG003873 AT5G04510.1 31.507 146 83 5 111 243 156 297 2.12e-12 70.1
MsaG003873 AT1G01140.1 33.099 142 87 6 111 247 131 269 2.18e-12 69.7
MsaG003873 AT5G12180.1 26.838 272 165 12 4 253 73 332 2.19e-12 70.1
MsaG003873 AT1G73500.1 34.868 152 88 5 112 253 157 307 2.27e-12 68.6
MsaG003873 AT1G01140.3 33.099 142 87 6 111 247 131 269 2.48e-12 69.7
MsaG003873 AT3G10540.1 31.507 146 83 5 111 243 157 298 2.49e-12 69.7
MsaG003873 AT4G38470.2 27.007 137 98 2 112 247 401 536 2.96e-12 69.7
MsaG003873 AT4G38470.1 27.007 137 98 2 112 247 401 536 3.04e-12 69.7
MsaG003873 AT3G01090.3 28.161 174 111 5 111 282 131 292 3.28e-12 69.7
MsaG003873 AT3G01090.1 28.161 174 111 5 111 282 131 292 3.28e-12 69.7
MsaG003873 AT5G57630.3 29.710 138 94 3 111 247 35 170 3.32e-12 68.6
MsaG003873 AT1G71530.1 28.846 208 128 9 2 195 145 346 3.65e-12 69.7
MsaG003873 AT3G01090.2 28.161 174 111 5 111 282 154 315 3.99e-12 69.3
MsaG003873 AT5G10930.1 25.704 284 179 10 3 266 11 282 4.46e-12 68.9
MsaG003873 AT1G71530.2 29.524 210 124 10 2 195 145 346 4.90e-12 68.9
MsaG003873 AT5G57630.2 29.710 138 94 3 111 247 123 258 6.22e-12 68.2
MsaG003873 AT1G71530.4 29.524 210 124 10 2 195 145 346 6.55e-12 67.8
MsaG003873 AT5G57630.1 29.710 138 94 3 111 247 123 258 7.06e-12 68.2
MsaG003873 AT2G45490.1 24.904 261 177 9 1 250 19 271 7.61e-12 67.0
MsaG003873 AT1G71530.3 29.524 210 124 10 2 195 145 346 8.33e-12 68.2
MsaG003873 AT1G08650.2 24.793 242 170 7 3 235 14 252 8.87e-12 66.6
MsaG003873 AT5G01850.2 28.472 144 94 2 113 247 157 300 9.84e-12 67.4
MsaG003873 AT5G01850.1 28.472 144 94 2 113 247 133 276 1.07e-11 67.0
MsaG003873 AT4G24400.2 33.094 139 87 6 111 246 121 256 1.18e-11 67.4
MsaG003873 AT1G02970.1 27.715 267 157 10 1 250 246 493 1.20e-11 67.8
MsaG003873 AT4G24400.1 33.094 139 87 6 111 246 121 256 1.22e-11 67.4
MsaG003873 AT1G01560.3 35.849 106 66 2 112 216 156 260 1.78e-11 66.2
MsaG003873 AT5G08590.1 30.542 203 118 10 1 190 1 193 1.87e-11 66.2
MsaG003873 AT4G04720.2 22.878 271 179 10 4 254 80 340 1.91e-11 67.4
MsaG003873 AT4G04720.1 22.878 271 179 10 4 254 80 340 1.91e-11 67.4
MsaG003873 AT1G53050.2 27.751 209 129 10 2 195 132 333 2.07e-11 67.4
MsaG003873 AT1G53050.1 27.751 209 129 10 2 195 132 333 2.07e-11 67.4
MsaG003873 AT2G31500.1 25.275 273 172 11 3 254 65 326 2.09e-11 67.0
MsaG003873 AT1G10210.2 26.756 299 160 14 3 252 31 319 3.50e-11 65.9
MsaG003873 AT1G10210.3 26.756 299 160 14 3 252 31 319 3.50e-11 65.9
MsaG003873 AT1G10210.1 26.756 299 160 14 3 252 31 319 3.50e-11 65.9
MsaG003873 AT1G12580.1 26.071 280 161 12 2 253 42 303 5.03e-11 65.9
MsaG003873 AT5G11850.1 28.369 141 96 4 111 247 719 858 5.09e-11 66.2
MsaG003873 AT1G49180.2 23.478 230 156 6 1 217 4 226 6.16e-11 65.1
MsaG003873 AT1G49180.1 23.478 230 156 6 1 217 4 226 7.16e-11 65.1
MsaG003873 AT5G63610.1 26.339 224 133 10 1 199 22 238 7.34e-11 65.1
MsaG003873 AT1G61950.1 24.373 279 168 10 2 253 96 358 7.74e-11 65.5
MsaG003873 AT1G07650.4 24.615 325 194 15 2 285 463 777 7.77e-11 65.5
MsaG003873 AT1G07650.3 24.615 325 194 15 2 285 650 964 9.30e-11 65.5

Find 136 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGATGAATCAGGTGATTT+TGG 0.163369 1:-63089096 MsaT003873.1:intron
TTCACTTCAACAAAAGTTTC+TGG 0.204293 1:-63087285 MsaT003873.1:CDS
TTCTGGAAACAACAGGTTTA+TGG 0.219390 1:+63087334 None:intergenic
GCCAACAAGGGGTGGTATTC+AGG 0.240479 1:-63086430 MsaT003873.1:CDS
ATCATCAGAAGTCAACATTT+TGG 0.253168 1:+63089068 None:intergenic
CAATCATCATATGATGATAA+TGG 0.253890 1:+63086312 None:intergenic
TGGTAGGCTTCTGAGCTTCT+TGG 0.268546 1:-63087654 MsaT003873.1:intron
CTCCTTGCTGATATACCTTA+TGG 0.283564 1:-63088912 MsaT003873.1:CDS
TGCTATGTCTGCATAATTAT+AGG 0.289257 1:-63089690 MsaT003873.1:CDS
CAAATTGGAAAAGGTGCTTT+TGG 0.293222 1:-63090622 MsaT003873.1:CDS
ATGGTTCTAAATCAGATATT+TGG 0.296716 1:-63088893 MsaT003873.1:CDS
AATCAAGCGCAGCAGGTTAA+TGG 0.299125 1:-63086148 MsaT003873.1:CDS
AAATTCAAGCAACCCTTCTA+AGG 0.316822 1:+63086002 None:intergenic
TAGTTCCAGAAGACACTGTT+AGG 0.321396 1:-63087518 MsaT003873.1:CDS
TACTACCTTACGATTGTTAG+AGG 0.322213 1:+63087239 None:intergenic
GTGGCTCGTTCAACTTCTTA+TGG 0.327226 1:-63089376 MsaT003873.1:CDS
CTTAGCAATACTAGAAGTTC+TGG 0.327466 1:+63087317 None:intergenic
TGTTGGCAGTGGAGCTACTA+TGG 0.332436 1:+63088282 None:intergenic
GTTCATCATACCTTGCTTGC+TGG 0.338361 1:+63085965 None:intergenic
TATGAAGTACTTGAGCAAAT+TGG 0.342103 1:-63090637 MsaT003873.1:CDS
AAGCAAACCAACACTCTTCC+TGG 0.348163 1:+63086398 None:intergenic
TAAATCAGATATTTGGTCCT+TGG 0.351620 1:-63088886 MsaT003873.1:CDS
CAAAGGGCTGAAGCCTTAGA+AGG 0.359612 1:-63086015 MsaT003873.1:CDS
CTCCAAGAGAAACTGCTATC+TGG 0.361644 1:-63085903 MsaT003873.1:CDS
TCTTTATACTCCACAATGAA+TGG 0.367447 1:+63089855 None:intergenic
AAATCAGATATTTGGTCCTT+GGG 0.375185 1:-63088885 MsaT003873.1:intron
GTATTCAGGAGCCTCCTTCC+AGG 0.382059 1:-63086416 MsaT003873.1:CDS
CACTTCATCTTTCCAACAAA+GGG 0.387089 1:-63086031 MsaT003873.1:CDS
AATCATCATATGATGATAAT+GGG 0.391644 1:+63086313 None:intergenic
GGTAGGCTTCTGAGCTTCTT+GGG 0.394445 1:-63087653 MsaT003873.1:intron
TCTCTTGGAGAAACCTTCTC+AGG 0.400020 1:+63085916 None:intergenic
GGTATATCAGCAAGGAGCTC+AGG 0.402753 1:+63088918 None:intergenic
AACCTTTGATTCAAGTGATC+AGG 0.409310 1:+63087399 None:intergenic
CATACACTGGGCCTCAGCTC+TGG 0.410738 1:+63087959 None:intergenic
CTAAGGCTTCAGCCCTTTGT+TGG 0.410936 1:+63086019 None:intergenic
TTAACTCTCCCCGCATTGAT+AGG 0.414820 1:-63086347 MsaT003873.1:CDS
AGCCTAGTTCTACGGATGAT+TGG 0.414948 1:-63086176 MsaT003873.1:CDS
TCTTGTATTGTGTAGGTTGT+GGG 0.416360 1:-63088960 MsaT003873.1:intron
CTTACAAATGCTTTGAATGC+AGG 0.417295 1:+63088739 None:intergenic
TAGTTCTACGGATGATTGGC+TGG 0.419965 1:-63086172 MsaT003873.1:CDS
ACCTCTGCACAAGGTTCCTC+AGG 0.426513 1:-63086264 MsaT003873.1:CDS
CTGGTTGAGCAAGAGCTTCA+AGG 0.428697 1:-63085884 MsaT003873.1:CDS
AACCAGATAGCAGTTTCTCT+TGG 0.438033 1:+63085901 None:intergenic
AGCAGGCAATGTATTTCGCC+TGG 0.439567 1:+63087578 None:intergenic
TTTGTGATGCTGTGTGAAAC+AGG 0.440287 1:+63086489 None:intergenic
CATCATTTCCTTTGCCAACA+AGG 0.442094 1:-63086443 MsaT003873.1:CDS
GAAAGATCGTGACATAAGAT+TGG 0.444478 1:-63089188 MsaT003873.1:CDS
TTATCCCTAACAGTGTCTTC+TGG 0.446092 1:+63087513 None:intergenic
CTAGAAGTTCTGGAAACAAC+AGG 0.454959 1:+63087327 None:intergenic
AGGATGTTGTATATCTGAAA+TGG 0.456353 1:-63088773 MsaT003873.1:CDS
GAGGTTGACGTCTTATTGAC+AGG 0.457733 1:+63086282 None:intergenic
CTTTATACTCCACAATGAAT+GGG 0.468596 1:+63089856 None:intergenic
TTCATCACAGTTGAATGAGA+TGG 0.469705 1:+63086237 None:intergenic
TAAAGACTCATGGGTAGAAA+AGG 0.470858 1:-63089838 MsaT003873.1:intron
GGCTGGGAATCAAGCGCAGC+AGG 0.479707 1:-63086155 MsaT003873.1:CDS
TCCTGAATACCACCCCTTGT+TGG 0.485778 1:+63086429 None:intergenic
CAGAACTTCTAGTATTGCTA+AGG 0.489435 1:-63087316 MsaT003873.1:CDS
GAAATACATTGCCTGCTCAT+TGG 0.489495 1:-63087572 MsaT003873.1:CDS
TGGCACCAACAGAAAATCAA+TGG 0.490905 1:-63087265 MsaT003873.1:CDS
TTCAGCTATCCTATCAATGC+GGG 0.491274 1:+63086338 None:intergenic
TGGTTGAGCAAGAGCTTCAA+GGG 0.492133 1:-63085883 MsaT003873.1:CDS
ACTAATGGTGTTCTGTTTCG+AGG 0.498649 1:-63089517 MsaT003873.1:CDS
CTCTGTTAAGCCTAGTTCTA+CGG 0.499207 1:-63086184 MsaT003873.1:CDS
GAAACCTTCTCAGGGCCAAA+TGG 0.501183 1:+63085925 None:intergenic
CATTCTTCATCGTGATGTCA+AGG 0.501934 1:-63089330 MsaT003873.1:CDS
CCTCCTTCCAGGAAGAGTGT+TGG 0.504378 1:-63086405 MsaT003873.1:CDS
GTCTCGTAGATCTGCACACC+AGG 0.505425 1:-63090403 MsaT003873.1:CDS
AAAGATCGTGACATAAGATT+GGG 0.506851 1:-63089187 MsaT003873.1:intron
AGAACATAAGATTGAAGATG+TGG 0.507877 1:+63087627 None:intergenic
GATGAACAAATGCACAATAG+AGG 0.509172 1:-63086220 MsaT003873.1:CDS
GTACTTGAGCAAATTGGAAA+AGG 0.515416 1:-63090631 MsaT003873.1:CDS
CTCCTGATCACTTGAATCAA+AGG 0.516179 1:-63087401 MsaT003873.1:CDS
GCTTAGCCATGTGTCTTCAC+CGG 0.517723 1:-63086379 MsaT003873.1:CDS
CTTTGACTCTGCCAATGAGC+AGG 0.519552 1:+63087561 None:intergenic
ATCATTTCCTTTGCCAACAA+GGG 0.522020 1:-63086442 MsaT003873.1:CDS
GAAGCTATAAAGAAGACTAA+TGG 0.523846 1:-63089532 MsaT003873.1:CDS
CAAGCAAGGTATGATGAACT+AGG 0.525673 1:-63085961 MsaT003873.1:CDS
TCATCACAGTTGAATGAGAT+GGG 0.525785 1:+63086238 None:intergenic
ATCTACGAGACCGCTCCGCT+TGG 0.531370 1:+63090415 None:intergenic
TTGTGGAGTATAAAGACTCA+TGG 0.532319 1:-63089848 MsaT003873.1:CDS
CTCTTGGAGAAACCTTCTCA+GGG 0.534367 1:+63085917 None:intergenic
ATATCTGATTTAGAACCATA+AGG 0.536846 1:+63088897 None:intergenic
ACACTTCATCTTTCCAACAA+AGG 0.540278 1:-63086032 MsaT003873.1:CDS
GGAGAGTTAACTGAGATATC+CGG 0.540502 1:+63086360 None:intergenic
TGGGGCTATTGAGTTTGAGA+TGG 0.543403 1:+63087598 None:intergenic
GAAACCATTTGGCCCTGAGA+AGG 0.545626 1:-63085929 MsaT003873.1:CDS
GCAGGCAATGTATTTCGCCT+GGG 0.545808 1:+63087579 None:intergenic
AGTTCCAGAAGACACTGTTA+GGG 0.556811 1:-63087517 MsaT003873.1:CDS
CAAGATTGCTCCAGCAAGCA+AGG 0.557861 1:-63085975 MsaT003873.1:CDS
AGGTTAGCGGAATTATGTAC+AGG 0.561217 1:-63087381 MsaT003873.1:CDS
ATTACAAAACCCATTCATTG+TGG 0.562333 1:-63089865 MsaT003873.1:CDS
AGCCAATCATCCGTAGAACT+AGG 0.562344 1:+63086174 None:intergenic
AGCTCAGGGCACATGTAGCT+AGG 0.562352 1:+63088933 None:intergenic
GTATATCAGCAAGGAGCTCA+GGG 0.564335 1:+63088919 None:intergenic
TCGGAGCAAAATGCACCGGC+TGG 0.564723 1:-63086099 MsaT003873.1:CDS
GAAATTCATGAGGATAAAAG+TGG 0.566197 1:-63086126 MsaT003873.1:CDS
CGAGACCGCTCCGCTTGGCG+TGG 0.571149 1:+63090420 None:intergenic
ATCTCAAACTCAATAGCCCC+AGG 0.573943 1:-63087596 MsaT003873.1:CDS
ATACCACCCCTTGTTGGCAA+AGG 0.576293 1:+63086435 None:intergenic
GGAATCCTCTAACAATCGTA+AGG 0.578223 1:-63087244 MsaT003873.1:CDS
TTTCCTTTGCCAACAAGGGG+TGG 0.582091 1:-63086438 MsaT003873.1:CDS
ATTAGACTTGCCACGCCAAG+CGG 0.585854 1:-63090430 MsaT003873.1:CDS
GAACATAAGATTGAAGATGT+GGG 0.589249 1:+63087628 None:intergenic
TGTTGTATATCTGAAATGGC+AGG 0.593284 1:-63088769 MsaT003873.1:CDS
TCACTTGAATCAAAGGTTAG+CGG 0.594355 1:-63087394 MsaT003873.1:CDS
TGTGGAGTATAAAGACTCAT+GGG 0.596388 1:-63089847 MsaT003873.1:CDS
TGAGGATAAAAGTGGTTCGT+CGG 0.598874 1:-63086118 MsaT003873.1:CDS
TCATTTCCTTTGCCAACAAG+GGG 0.600562 1:-63086441 MsaT003873.1:CDS
AATTATAGGTTACTGTGAGG+TGG 0.601144 1:-63089676 MsaT003873.1:CDS
TTCGTCGGAGCAAAATGCAC+CGG 0.607566 1:-63086103 MsaT003873.1:CDS
CCAACACTCTTCCTGGAAGG+AGG 0.607693 1:+63086405 None:intergenic
AAACCAACACTCTTCCTGGA+AGG 0.610683 1:+63086402 None:intergenic
AGTTCTACGGATGATTGGCT+GGG 0.613274 1:-63086171 MsaT003873.1:CDS
AAGATGAAGTGTCAAACTGT+CGG 0.614652 1:+63086043 None:intergenic
GTGTAGCTTGATGCACCAGC+CGG 0.617772 1:+63086084 None:intergenic
AACCATAAGGTATATCAGCA+AGG 0.621158 1:+63088910 None:intergenic
GTCTGGTGAAAAGCATGCTG+CGG 0.624556 1:-63087988 MsaT003873.1:CDS
CAGGTTAATGGAAATTCATG+AGG 0.625999 1:-63086136 MsaT003873.1:CDS
TCCTGAGGAACCTTGTGCAG+AGG 0.627522 1:+63086263 None:intergenic
AAAGGGCTGAAGCCTTAGAA+GGG 0.629058 1:-63086014 MsaT003873.1:CDS
AGATATCCGGTGAAGACACA+TGG 0.636769 1:+63086373 None:intergenic
AATGGTGTTCTGTTTCGAGG+AGG 0.648640 1:-63089514 MsaT003873.1:CDS
AGGTTGACGTCTTATTGACA+GGG 0.648685 1:+63086283 None:intergenic
AAGACGTCAACCTCTGCACA+AGG 0.650494 1:-63086273 MsaT003873.1:CDS
CAGGCAATGTATTTCGCCTG+GGG 0.651123 1:+63087580 None:intergenic
TGATAGCCGTGACATGAAGT+CGG 0.656146 1:-63087358 MsaT003873.1:CDS
TATGGACCGACTTCATGTCA+CGG 0.658519 1:+63087352 None:intergenic
ACTTGCCACGCCAAGCGGAG+CGG 0.673346 1:-63090425 MsaT003873.1:CDS
TCGTAGATCTGCACACCAGG+AGG 0.686664 1:-63090400 MsaT003873.1:intron
CATACCTAGAGGAGTTTACG+GGG 0.693451 1:+63085837 None:intergenic
CATAATTATAGGTTACTGTG+AGG 0.699829 1:-63089679 MsaT003873.1:CDS
TCAGCTATCCTATCAATGCG+GGG 0.699981 1:+63086339 None:intergenic
ATTCAGCTATCCTATCAATG+CGG 0.703516 1:+63086337 None:intergenic
CGTAGAACTAGGCTTAACAG+AGG 0.705727 1:+63086185 None:intergenic
GGTTGAGCAAGAGCTTCAAG+GGG 0.709249 1:-63085882 MsaT003873.1:CDS
TGAATGAGATGGGAATCCTG+AGG 0.749091 1:+63086248 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 63085852 63090668 63085852 ID=MsaG003873
Chr1 mRNA 63085852 63090668 63085852 ID=MsaT003873.1;Parent=MsaG003873
Chr1 exon 63085852 63086514 63085852 ID=MsaT003873.1.exon15;Parent=MsaT003873.1
Chr1 CDS 63085852 63086514 63085852 ID=cds.MsaT003873.1;Parent=MsaT003873.1
Chr1 exon 63087230 63087435 63087230 ID=MsaT003873.1.exon14;Parent=MsaT003873.1
Chr1 CDS 63087230 63087435 63087230 ID=cds.MsaT003873.1;Parent=MsaT003873.1
Chr1 exon 63087499 63087670 63087499 ID=MsaT003873.1.exon13;Parent=MsaT003873.1
Chr1 CDS 63087499 63087670 63087499 ID=cds.MsaT003873.1;Parent=MsaT003873.1
Chr1 exon 63087964 63088015 63087964 ID=MsaT003873.1.exon12;Parent=MsaT003873.1
Chr1 CDS 63087964 63088015 63087964 ID=cds.MsaT003873.1;Parent=MsaT003873.1
Chr1 exon 63088265 63088338 63088265 ID=MsaT003873.1.exon11;Parent=MsaT003873.1
Chr1 CDS 63088265 63088338 63088265 ID=cds.MsaT003873.1;Parent=MsaT003873.1
Chr1 exon 63088744 63088793 63088744 ID=MsaT003873.1.exon10;Parent=MsaT003873.1
Chr1 CDS 63088744 63088793 63088744 ID=cds.MsaT003873.1;Parent=MsaT003873.1
Chr1 exon 63088886 63088967 63088886 ID=MsaT003873.1.exon9;Parent=MsaT003873.1
Chr1 CDS 63088886 63088967 63088886 ID=cds.MsaT003873.1;Parent=MsaT003873.1
Chr1 exon 63089056 63089105 63089056 ID=MsaT003873.1.exon8;Parent=MsaT003873.1
Chr1 CDS 63089056 63089105 63089056 ID=cds.MsaT003873.1;Parent=MsaT003873.1
Chr1 exon 63089188 63089229 63089188 ID=MsaT003873.1.exon7;Parent=MsaT003873.1
Chr1 CDS 63089188 63089229 63089188 ID=cds.MsaT003873.1;Parent=MsaT003873.1
Chr1 exon 63089327 63089397 63089327 ID=MsaT003873.1.exon6;Parent=MsaT003873.1
Chr1 CDS 63089327 63089397 63089327 ID=cds.MsaT003873.1;Parent=MsaT003873.1
Chr1 exon 63089511 63089558 63089511 ID=MsaT003873.1.exon5;Parent=MsaT003873.1
Chr1 CDS 63089511 63089558 63089511 ID=cds.MsaT003873.1;Parent=MsaT003873.1
Chr1 exon 63089666 63089715 63089666 ID=MsaT003873.1.exon4;Parent=MsaT003873.1
Chr1 CDS 63089666 63089715 63089666 ID=cds.MsaT003873.1;Parent=MsaT003873.1
Chr1 exon 63089839 63089904 63089839 ID=MsaT003873.1.exon3;Parent=MsaT003873.1
Chr1 CDS 63089839 63089904 63089839 ID=cds.MsaT003873.1;Parent=MsaT003873.1
Chr1 exon 63090401 63090455 63090401 ID=MsaT003873.1.exon2;Parent=MsaT003873.1
Chr1 CDS 63090401 63090455 63090401 ID=cds.MsaT003873.1;Parent=MsaT003873.1
Chr1 exon 63090583 63090668 63090583 ID=MsaT003873.1.exon1;Parent=MsaT003873.1
Chr1 CDS 63090583 63090668 63090583 ID=cds.MsaT003873.1;Parent=MsaT003873.1
Gene Sequence

>MsaT003873.1

ATGGAGCAGTATGAAGTACTTGAGCAAATTGGAAAAGGTGCTTTTGGTTCAGCTCTTCTTGTGAGACATAAACATGAGAAGAAAAAAAGATTAGACTTGCCACGCCAAGCGGAGCGGTCTCGTAGATCTGCACACCAGGAGATGGAGCTTATCTCTAAATTACAAAACCCATTCATTGTGGAGTATAAAGACTCATGGGTAGAAAAGGGTTGCTATGTCTGCATAATTATAGGTTACTGTGAGGTGGAGATATGTAAGGCGGAAGCTATAAAGAAGACTAATGGTGTTCTGTTTCGAGGAGGTTATGGCTCGTTCAACTTCTTATGGCATGACTACTTGCACATGAATCACATTCTTCATCGTGATGTCAAGGTTTTGTTCAAATATCTTCTTGTGAAAGATCGTGACATAAGATTGGGTGATTTTGGACTTGCCAAAATGTTGACTTCTGATGATCTTACTTCCTCTGTTGTGGGAACTCCTAGCTACATGTGCCCTGAGCTCCTTGCTGATATACCTTATGGTTCTAAATCAGATATTTGGTCCTTGGGATGTTGTATATCTGAAATGGCAGGACATAAGCCTGCATTCAAAGCATTTGATATACAAGCATTGATTATCAAGATTAGTAAGTCCATAGTAGCTCCACTGCCAACAAAATATTCTAGTTCATTTCGAAGTCTGGTGAAAAGCATGCTGCGGAAAAATCCAGAGCTGAGGCCCAGTGCTTCTGAGCTTCTTGGGCACCCACATCTTCAATCTTATGTTCTAAAGATCCATCTCAAACTCAATAGCCCCAGGCGAAATACATTGCCTGCTCATTGGCAGAGTCAAAGTACGAAGAAAACTAGATTTTTAGTTCCAGAAGACACTGTTAGGGATAAGCGCTATTCTTACAAAATAGGTTGTACTCCTGATCACTTGAATCAAAGGTTAGCGGAATTATGTACAGGTGATAGCCGTGACATGAAGTCGGTCCATAAACCTGTTGTTTCCAGAACTTCTAGTATTGCTAAGGCTCCAAAGTTCACTTCAACAAAAGTTTCTGGCACCAACAGAAAATCAATGGAATCCTCTAACAATCGTAAGGTAGTAAAGCAAACCCTTCCTGTTTCACACAGCATCACAAAATCTGCTCATACAAATCGCAGAGCATCATTTCCTTTGCCAACAAGGGGTGGTATTCAGGAGCCTCCTTCCAGGAAGAGTGTTGGTTTGCTTAGCCATGTGTCTTCACCGGATATCTCAGTTAACTCTCCCCGCATTGATAGGATAGCTGAATTCCCATTATCATCATATGATGATTGTTTGTTCCCTGTCAATAAGACGTCAACCTCTGCACAAGGTTCCTCAGGATTCCCATCTCATTCAACTGTGATGAACAAATGCACAATAGAGGTATGTGATAGAGCCTCTGTTAAGCCTAGTTCTACGGATGATTGGCTGGGAATCAAGCGCAGCAGGTTAATGGAAATTCATGAGGATAAAAGTGGTTCGTCGGAGCAAAATGCACCGGCTGGTGCATCAAGCTACACATCTTCAGATTTGCAGCGCCGACAGTTTGACACTTCATCTTTCCAACAAAGGGCTGAAGCCTTAGAAGGGTTGCTTGAATTTAGTGCAAGATTGCTCCAGCAAGCAAGGTATGATGAACTAGGAGTTTTGTTGAAACCATTTGGCCCTGAGAAGGTTTCTCCAAGAGAAACTGCTATCTGGTTGAGCAAGAGCTTCAAGGGGAACACTAACAACACAGAAGAATCCCCGTAA
Protein sequence

>MsaT003873.1

MEQYEVLEQIGKGAFGSALLVRHKHEKKKRLDLPRQAERSRRSAHQEMELISKLQNPFIVEYKDSWVEKGCYVCIIIGYCEVEICKAEAIKKTNGVLFRGGYGSFNFLWHDYLHMNHILHRDVKVLFKYLLVKDRDIRLGDFGLAKMLTSDDLTSSVVGTPSYMCPELLADIPYGSKSDIWSLGCCISEMAGHKPAFKAFDIQALIIKISKSIVAPLPTKYSSSFRSLVKSMLRKNPELRPSASELLGHPHLQSYVLKIHLKLNSPRRNTLPAHWQSQSTKKTRFLVPEDTVRDKRYSYKIGCTPDHLNQRLAELCTGDSRDMKSVHKPVVSRTSSIAKAPKFTSTKVSGTNRKSMESSNNRKVVKQTLPVSHSITKSAHTNRRASFPLPTRGGIQEPPSRKSVGLLSHVSSPDISVNSPRIDRIAEFPLSSYDDCLFPVNKTSTSAQGSSGFPSHSTVMNKCTIEVCDRASVKPSSTDDWLGIKRSRLMEIHEDKSGSSEQNAPAGASSYTSSDLQRRQFDTSSFQQRAEALEGLLEFSARLLQQARYDELGVLLKPFGPEKVSPRETAIWLSKSFKGNTNNTEESP*