AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG004140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG004140 MtrunA17_Chr5g0441131 71.795 195 35 4 12 205 10 185 1.38e-81 245
MsaG004140 MtrunA17_Chr5g0440761 57.851 242 74 8 12 236 13 243 1.39e-78 240
MsaG004140 MtrunA17_Chr5g0441141 53.846 273 91 10 12 259 13 275 4.44e-77 237
MsaG004140 MtrunA17_Chr5g0440781 63.402 194 54 6 12 205 13 189 4.78e-73 223
MsaG004140 MtrunA17_Chr1g0193901 91.753 97 8 0 1 97 1 97 3.75e-48 157
MsaG004140 MtrunA17_Chr1g0193891 91.753 97 8 0 1 97 1 97 3.75e-48 157
MsaG004140 MtrunA17_Chr1g0193871 91.753 97 8 0 1 97 1 97 3.75e-48 157
MsaG004140 MtrunA17_Chr1g0193881 91.753 97 8 0 1 97 1 97 3.75e-48 157
MsaG004140 MtrunA17_Chr1g0192411 46.842 190 92 6 10 193 11 197 5.07e-40 145
MsaG004140 MtrunA17_Chr8g0354661 40.500 200 103 7 11 197 37 233 2.41e-39 145
MsaG004140 MtrunA17_Chr1g0154031 46.243 173 83 6 11 179 76 242 2.39e-38 140
MsaG004140 MtrunA17_Chr3g0099131 56.897 116 48 2 11 126 41 154 1.13e-37 140
MsaG004140 MtrunA17_Chr5g0425591 74.118 85 21 1 12 96 10 93 1.65e-37 129
MsaG004140 MtrunA17_Chr4g0048511 52.893 121 54 3 8 127 10 128 6.21e-36 132
MsaG004140 MtrunA17_Chr3g0080861 48.819 127 62 3 11 136 37 161 1.82e-35 134
MsaG004140 MtrunA17_Chr2g0322521 55.932 118 50 2 11 128 29 144 2.00e-35 132
MsaG004140 MtrunA17_Chr2g0281071 54.701 117 50 3 8 123 10 124 2.00e-35 131
MsaG004140 MtrunA17_Chr2g0323411 54.386 114 49 3 11 123 12 123 5.22e-35 129
MsaG004140 MtrunA17_Chr7g0270891 45.098 153 79 4 4 155 5 153 3.05e-34 128
MsaG004140 MtrunA17_Chr1g0151941 34.043 235 134 9 9 234 10 232 6.16e-34 125
MsaG004140 MtrunA17_Chr4g0032401 54.128 109 48 2 7 115 13 119 1.02e-33 126
MsaG004140 MtrunA17_Chr1g0193371 50.413 121 57 3 4 123 5 123 1.79e-33 126
MsaG004140 MtrunA17_Chr5g0410961 56.190 105 44 2 11 115 12 114 2.40e-33 125
MsaG004140 MtrunA17_Chr1g0193801 41.875 160 84 5 4 162 5 156 3.49e-33 126
MsaG004140 MtrunA17_Chr1g0187761 53.333 105 47 2 11 115 12 114 6.04e-33 122
MsaG004140 MtrunA17_Chr5g0395281 52.174 115 52 3 11 124 12 124 9.19e-33 123
MsaG004140 MtrunA17_Chr3g0117091 47.692 130 60 4 9 132 10 137 1.14e-32 124
MsaG004140 MtrunA17_Chr7g0274581 50.476 105 50 2 11 115 12 114 2.44e-32 119
MsaG004140 MtrunA17_Chr3g0115821 50.435 115 54 3 11 124 12 124 3.04e-32 122
MsaG004140 MtrunA17_Chr2g0328771 53.333 105 47 2 11 115 20 122 3.38e-32 122
MsaG004140 MtrunA17_Chr7g0271241 53.271 107 48 2 4 110 5 109 4.56e-32 123
MsaG004140 MtrunA17_Chr4g0039971 51.304 115 53 3 11 124 13 125 5.47e-32 122
MsaG004140 MtrunA17_Chr1g0211161 47.934 121 60 3 4 123 6 124 7.43e-32 119
MsaG004140 MtrunA17_Chr6g0453751 63.265 98 27 2 7 96 16 112 8.73e-32 115
MsaG004140 MtrunA17_Chr3g0088461 50.000 110 53 2 6 115 17 124 1.31e-31 121
MsaG004140 MtrunA17_Chr1g0203411 46.847 111 57 2 11 121 12 120 1.37e-31 120
MsaG004140 MtrunA17_Chr1g0167691 50.467 107 51 2 9 115 10 114 1.67e-31 118
MsaG004140 MtrunA17_Chr3g0103281 41.892 148 78 4 11 152 12 157 2.54e-31 119
MsaG004140 MtrunA17_Chr4g0058631 47.107 121 61 3 4 123 5 123 3.05e-31 120
MsaG004140 MtrunA17_Chr4g0068061 41.935 155 79 4 11 156 12 164 7.74e-31 119
MsaG004140 MtrunA17_Chr8g0342521 47.934 121 60 3 4 123 5 123 9.27e-31 119
MsaG004140 MtrunA17_Chr2g0309911 42.657 143 73 4 1 142 1 135 1.02e-30 118
MsaG004140 MtrunA17_Chr4g0022931 46.789 109 56 2 11 119 13 119 1.08e-30 117
MsaG004140 MtrunA17_Chr8g0385321 50.926 108 51 2 17 123 17 123 1.09e-30 117
MsaG004140 MtrunA17_Chr4g0022901 43.066 137 68 4 11 147 13 139 1.18e-30 117
MsaG004140 MtrunA17_Chr1g0167661 50.467 107 51 2 9 115 10 114 1.25e-30 116
MsaG004140 MtrunA17_Chr2g0323351 50.476 105 50 2 11 115 12 114 1.69e-30 115
MsaG004140 MtrunA17_Chr6g0450101 43.077 130 72 2 2 131 5 132 1.83e-30 114
MsaG004140 MtrunA17_Chr8g0387421 46.957 115 59 2 4 118 5 117 2.89e-30 117
MsaG004140 MtrunA17_Chr4g0042671 47.368 114 57 3 11 123 12 123 2.97e-30 118
MsaG004140 MtrunA17_Chr2g0330041 46.281 121 62 3 4 123 5 123 3.53e-30 118
MsaG004140 MtrunA17_Chr1g0152011 52.830 106 47 3 11 115 12 115 4.27e-30 117
MsaG004140 MtrunA17_Chr5g0397231 48.148 108 54 2 4 111 5 110 4.34e-30 117
MsaG004140 MtrunA17_Chr1g0209661 33.195 241 117 9 11 225 27 249 4.56e-30 116
MsaG004140 MtrunA17_Chr8g0342541 47.321 112 57 2 4 115 5 114 4.58e-30 117
MsaG004140 MtrunA17_Chr4g0037141 49.074 108 53 2 17 123 17 123 5.48e-30 115
MsaG004140 MtrunA17_Chr4g0022911 41.379 145 68 4 11 147 13 148 5.77e-30 115
MsaG004140 MtrunA17_Chr6g0452271 43.262 141 76 4 11 149 12 150 6.40e-30 116
MsaG004140 MtrunA17_Chr7g0228231 49.057 106 52 2 11 116 14 117 6.55e-30 113
MsaG004140 MtrunA17_Chr5g0400821 51.887 106 48 3 11 115 12 115 7.28e-30 115
MsaG004140 MtrunA17_Chr7g0217741 46.087 115 59 3 11 124 12 124 7.36e-30 115
MsaG004140 MtrunA17_Chr4g0022881 50.000 104 50 2 12 115 13 114 1.15e-29 113
MsaG004140 MtrunA17_Chr3g0131121 49.074 108 53 2 17 123 17 123 1.17e-29 114
MsaG004140 MtrunA17_Chr5g0435101 38.194 144 86 3 11 153 11 152 1.34e-29 112
MsaG004140 MtrunA17_Chr1g0194301 47.706 109 55 2 11 119 33 139 1.59e-29 114
MsaG004140 MtrunA17_Chr2g0327351 53.922 102 44 3 11 111 12 111 2.19e-29 114
MsaG004140 MtrunA17_Chr4g0054391 53.465 101 44 3 11 110 12 110 2.77e-29 113
MsaG004140 MtrunA17_Chr4g0028311 51.887 106 48 3 11 115 12 115 2.84e-29 114
MsaG004140 MtrunA17_Chr6g0453471 45.217 115 60 3 11 124 12 124 4.35e-29 114
MsaG004140 MtrunA17_Chr7g0254411 49.524 105 51 2 11 115 12 114 6.24e-29 113
MsaG004140 MtrunA17_Chr6g0453211 50.495 101 48 2 11 111 12 110 7.02e-29 113
MsaG004140 MtrunA17_Chr8g0349261 48.598 107 52 3 11 116 13 117 7.98e-29 112
MsaG004140 MtrunA17_Chr3g0135311 42.759 145 73 5 11 149 12 152 8.80e-29 113
MsaG004140 MtrunA17_Chr4g0060721 50.000 106 50 3 11 115 13 116 9.42e-29 113
MsaG004140 MtrunA17_Chr7g0264641 50.943 106 49 3 11 115 12 115 1.09e-28 111
MsaG004140 MtrunA17_Chr8g0343831 49.515 103 50 2 9 111 6 106 1.59e-28 110
MsaG004140 MtrunA17_Chr1g0186061 46.429 112 58 2 4 115 13 122 2.31e-28 110
MsaG004140 MtrunA17_Chr1g0203441 49.541 109 53 2 7 115 9 115 2.70e-28 110
MsaG004140 MtrunA17_Chr3g0092401 48.571 105 52 2 11 115 13 115 3.36e-28 111
MsaG004140 MtrunA17_Chr4g0070641 48.421 95 48 1 17 111 17 110 3.92e-28 107
MsaG004140 MtrunA17_Chr4g0055981 44.248 113 61 2 7 119 51 161 4.04e-28 108
MsaG004140 MtrunA17_Chr1g0194951 49.505 101 49 2 11 111 12 110 4.14e-28 112
MsaG004140 MtrunA17_Chr4g0013361 39.773 176 89 7 11 180 10 174 4.41e-28 110
MsaG004140 MtrunA17_Chr7g0261281 47.619 105 53 2 11 115 12 114 5.22e-28 110
MsaG004140 MtrunA17_Chr8g0346561 49.474 95 47 1 17 111 17 110 5.38e-28 110
MsaG004140 MtrunA17_Chr7g0217221 47.619 105 53 2 11 115 12 114 5.73e-28 109
MsaG004140 MtrunA17_Chr4g0070611 34.496 258 144 11 11 255 12 257 6.13e-28 110
MsaG004140 MtrunA17_Chr7g0275911 46.316 95 50 1 17 111 17 110 9.64e-28 108
MsaG004140 MtrunA17_Chr4g0072751 50.980 102 47 3 11 111 12 111 1.09e-27 110
MsaG004140 MtrunA17_Chr3g0121241 45.614 114 59 3 11 123 42 153 1.24e-27 109
MsaG004140 MtrunA17_Chr6g0470971 38.854 157 84 4 6 155 9 160 1.32e-27 108
MsaG004140 MtrunA17_Chr6g0487491 44.538 119 57 3 10 120 11 128 1.95e-27 108
MsaG004140 MtrunA17_Chr4g0022891 38.621 145 81 3 11 155 12 148 2.84e-27 107
MsaG004140 MtrunA17_Chr2g0311221 51.961 102 47 2 10 111 13 112 6.26e-27 108
MsaG004140 MtrunA17_Chr1g0180391 40.876 137 79 2 11 147 19 153 1.14e-26 105
MsaG004140 MtrunA17_Chr1g0168661 47.475 99 51 1 17 115 26 123 1.27e-26 105
MsaG004140 MtrunA17_Chr8g0342481 45.133 113 59 3 4 115 5 115 1.79e-26 108
MsaG004140 MtrunA17_Chr3g0110351 44.167 120 64 3 11 129 12 129 1.80e-26 106
MsaG004140 MtrunA17_Chr7g0228891 46.087 115 59 3 11 124 12 124 2.08e-26 105
MsaG004140 MtrunA17_Chr5g0434571 46.087 115 59 3 11 124 48 160 2.17e-26 107
MsaG004140 MtrunA17_Chr1g0194291 43.119 109 60 2 11 119 21 127 3.87e-26 104
MsaG004140 MtrunA17_Chr4g0044421 46.602 103 53 2 13 115 14 114 5.50e-26 102
MsaG004140 MtrunA17_Chr7g0240821 45.918 98 52 1 14 111 3 99 8.77e-26 102
MsaG004140 MtrunA17_Chr7g0269831 52.475 101 46 2 11 111 12 110 9.41e-26 105
MsaG004140 MtrunA17_Chr4g0057031 44.348 115 61 3 11 124 12 124 9.50e-26 103
MsaG004140 MtrunA17_Chr3g0099141 58.333 84 33 2 11 94 40 121 1.71e-25 99.4
MsaG004140 MtrunA17_Chr5g0417821 45.614 114 59 3 11 123 7 118 3.38e-25 102
MsaG004140 MtrunA17_Chr8g0334881 45.872 109 56 3 11 118 10 116 1.03e-24 102
MsaG004140 MtrunA17_Chr2g0293911 44.954 109 58 2 11 119 24 130 1.73e-24 101
MsaG004140 MtrunA17_Chr5g0434931 41.905 105 59 2 11 115 35 137 8.89e-24 98.6
MsaG004140 MtrunA17_Chr4g0068921 44.762 105 56 2 11 115 24 126 2.80e-23 95.1
MsaG004140 MtrunA17_Chr5g0434841 44.762 105 56 2 11 115 20 122 2.97e-23 97.8
MsaG004140 MtrunA17_Chr5g0434911 41.121 107 61 2 9 115 19 123 8.73e-23 95.9
MsaG004140 MtrunA17_Chr8g0360111 42.574 101 56 2 11 111 25 123 1.09e-22 95.1
MsaG004140 MtrunA17_Chr5g0434831 42.857 105 58 2 11 115 7 109 2.17e-22 92.8
MsaG004140 MtrunA17_Chr2g0327821 41.818 110 62 2 6 115 1 108 3.46e-22 93.2
MsaG004140 MtrunA17_Chr7g0247131 49.383 81 39 2 44 123 10 89 4.76e-22 93.6
MsaG004140 MtrunA17_Chr4g0030881 38.760 129 67 4 5 123 1 127 1.06e-21 92.4
MsaG004140 MtrunA17_Chr6g0454921 46.809 94 48 2 17 110 18 109 1.64e-21 90.9
MsaG004140 MtrunA17_Chr7g0220341 41.748 103 56 3 11 111 25 125 2.01e-21 92.0
MsaG004140 MtrunA17_Chr3g0133601 41.509 106 60 2 17 122 40 143 2.49e-21 90.5
MsaG004140 MtrunA17_Chr5g0401731 47.000 100 50 3 17 115 18 115 2.82e-21 92.4
MsaG004140 MtrunA17_Chr7g0228991 40.000 105 61 2 11 115 29 131 4.24e-21 91.3
MsaG004140 MtrunA17_Chr4g0058991 28.631 241 146 7 17 235 212 448 8.31e-21 92.4
MsaG004140 MtrunA17_Chr2g0323321 46.512 86 45 1 1 86 1 85 1.19e-20 85.5
MsaG004140 MtrunA17_Chr5g0395221 51.316 76 36 1 11 86 12 86 4.98e-20 83.2
MsaG004140 MtrunA17_Chr4g0042611 48.052 77 39 1 10 86 11 86 6.19e-20 82.8
MsaG004140 MtrunA17_Chr4g0072451 47.115 104 43 4 65 158 11 112 6.32e-20 84.3
MsaG004140 MtrunA17_Chr8g0342511 50.633 79 39 0 8 86 8 86 6.82e-20 83.2
MsaG004140 MtrunA17_Chr3g0117511 40.541 111 62 3 17 125 186 294 8.78e-20 89.4
MsaG004140 MtrunA17_Chr5g0429661 41.284 109 61 3 7 115 116 221 1.44e-19 88.2
MsaG004140 MtrunA17_Chr4g0008551 40.952 105 60 2 17 121 41 143 1.73e-19 87.8
MsaG004140 MtrunA17_Chr6g0460661 38.679 106 63 2 17 122 19 122 4.48e-19 82.8
MsaG004140 MtrunA17_Chr8g0342531 48.718 78 39 1 4 81 5 81 3.74e-18 80.5
MsaG004140 MtrunA17_Chr4g0053431 44.000 100 53 3 17 115 8 105 5.37e-18 82.4
MsaG004140 MtrunA17_Chr6g0480581 40.196 102 56 3 17 115 7 106 6.00e-18 81.6
MsaG004140 MtrunA17_Chr2g0294811 48.684 76 38 1 11 86 12 86 1.43e-17 77.4
MsaG004140 MtrunA17_Chr7g0228401 36.585 123 52 3 16 114 257 377 2.57e-17 82.4
MsaG004140 MtrunA17_Chr5g0437321 42.105 95 53 2 17 111 22 114 9.27e-17 79.3
MsaG004140 MtrunA17_Chr5g0397841 41.905 105 58 3 6 110 103 204 1.20e-16 80.5
MsaG004140 MtrunA17_Chr7g0238651 38.182 110 65 2 11 118 4 112 1.53e-16 79.3
MsaG004140 MtrunA17_Chr8g0342461 46.429 84 43 2 4 86 5 87 1.96e-16 75.1
MsaG004140 MtrunA17_Chr7g0238631 34.194 155 92 5 6 153 106 257 3.66e-16 79.0
MsaG004140 MtrunA17_Chr7g0238631 35.238 105 59 3 9 110 58 156 8.00e-13 68.9
MsaG004140 MtrunA17_Chr8g0342471 46.429 84 43 2 4 86 5 87 5.54e-16 73.9
MsaG004140 MtrunA17_Chr1g0157731 37.273 110 66 3 6 115 84 190 1.77e-15 77.4
MsaG004140 MtrunA17_Chr1g0157731 36.449 107 56 3 9 110 35 134 4.27e-14 73.2
MsaG004140 MtrunA17_Chr4g0042501 38.462 104 59 3 17 117 108 209 1.77e-15 76.6
MsaG004140 MtrunA17_Chr3g0139671 37.273 110 66 3 6 115 78 184 1.99e-15 77.0
MsaG004140 MtrunA17_Chr3g0139671 37.383 107 55 3 9 110 29 128 1.59e-14 74.3
MsaG004140 MtrunA17_Chr3g0125801 39.423 104 58 3 17 117 19 120 4.53e-15 74.3
MsaG004140 MtrunA17_Chr7g0228531 37.624 101 60 2 17 117 223 320 5.81e-15 75.1
MsaG004140 MtrunA17_Chr5g0417621 37.500 104 60 3 17 117 137 238 8.25e-15 74.7
MsaG004140 MtrunA17_Chr6g0460671 35.897 117 73 2 8 124 93 207 1.67e-14 73.6
MsaG004140 MtrunA17_Chr5g0416341 33.577 137 84 3 7 143 19 148 3.15e-14 73.2
MsaG004140 MtrunA17_Chr3g0093811 39.560 91 50 3 37 123 4 93 5.35e-14 70.9
MsaG004140 MtrunA17_Chr7g0254261 31.410 156 105 2 17 172 92 245 5.78e-14 71.6
MsaG004140 MtrunA17_Chr7g0229101 45.070 71 38 1 44 114 4 73 6.52e-14 69.7
MsaG004140 MtrunA17_Chr1g0177901 40.659 91 52 2 24 114 4 92 7.58e-14 69.7
MsaG004140 MtrunA17_Chr7g0229131 41.096 73 42 1 44 116 4 75 1.35e-13 68.2
MsaG004140 MtrunA17_Chr7g0228481 37.755 98 58 2 17 114 223 317 3.52e-13 69.7
MsaG004140 MtrunA17_Chr5g0434901 40.580 69 40 1 46 114 7 74 1.69e-12 63.5
MsaG004140 MtrunA17_Chr8g0362231 31.304 115 77 2 7 121 15 127 3.41e-12 67.0
MsaG004140 MtrunA17_Chr7g0233061 43.077 65 36 1 50 114 213 276 2.09e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG004140 AT2G26960.1 46.541 159 74 4 9 158 18 174 6.65e-40 145
MsaG004140 AT5G55020.1 53.782 119 53 2 11 129 26 142 2.48e-38 142
MsaG004140 AT2G32460.2 44.099 161 78 3 6 166 1 149 3.22e-38 141
MsaG004140 AT2G32460.1 43.293 164 81 3 3 166 10 161 4.12e-38 141
MsaG004140 AT3G11440.2 55.085 118 51 2 11 128 41 156 1.90e-37 139
MsaG004140 AT5G06100.1 55.652 115 49 2 11 125 32 144 4.58e-37 138
MsaG004140 AT3G11440.3 55.085 118 51 2 11 128 41 156 4.67e-37 139
MsaG004140 AT3G11440.4 55.085 118 51 2 11 128 41 156 4.67e-37 139
MsaG004140 AT3G11440.1 55.085 118 51 2 11 128 41 156 4.67e-37 139
MsaG004140 AT5G06100.5 55.652 115 49 2 11 125 32 144 9.96e-37 138
MsaG004140 AT5G06100.2 55.652 115 49 2 11 125 32 144 9.96e-37 138
MsaG004140 AT5G06100.3 55.652 115 49 2 11 125 32 144 9.96e-37 138
MsaG004140 AT5G06100.4 55.652 115 49 2 11 125 32 144 9.96e-37 138
MsaG004140 AT4G26930.1 53.043 115 52 2 11 125 19 131 1.42e-36 135
MsaG004140 AT4G21440.1 36.170 235 141 7 11 243 12 239 2.85e-36 134
MsaG004140 AT2G26950.1 46.043 139 74 1 5 143 9 146 1.72e-35 132
MsaG004140 AT5G54230.1 42.012 169 91 4 11 174 12 178 3.03e-35 130
MsaG004140 AT5G26660.1 51.240 121 56 3 4 123 5 123 2.57e-34 129
MsaG004140 AT4G01680.3 43.151 146 80 3 4 148 5 148 7.67e-34 124
MsaG004140 AT4G28110.1 53.509 114 50 3 11 123 12 123 1.66e-33 125
MsaG004140 AT4G05100.1 53.509 114 50 3 11 123 13 124 3.04e-33 125
MsaG004140 AT4G01680.1 43.151 146 80 3 4 148 5 148 4.69e-33 125
MsaG004140 AT1G57560.2 50.000 122 58 3 4 124 5 124 6.74e-33 123
MsaG004140 AT1G57560.1 50.000 122 58 3 4 124 5 124 1.48e-32 123
MsaG004140 AT5G16770.4 52.381 105 48 2 11 115 12 114 4.45e-32 122
MsaG004140 AT5G16770.3 52.381 105 48 2 11 115 12 114 4.45e-32 122
MsaG004140 AT5G16770.1 52.381 105 48 2 11 115 12 114 8.04e-32 122
MsaG004140 AT5G16770.2 52.381 105 48 2 11 115 12 114 8.04e-32 122
MsaG004140 AT5G12870.1 51.852 108 50 2 9 116 16 121 1.09e-31 120
MsaG004140 AT3G08500.1 51.887 106 49 2 10 115 29 132 1.15e-31 121
MsaG004140 AT1G09540.1 49.587 121 58 3 4 123 5 123 1.20e-31 122
MsaG004140 AT5G10280.1 51.304 115 53 3 11 124 12 124 1.22e-31 121
MsaG004140 AT3G61250.1 48.246 114 56 3 11 123 12 123 1.40e-31 120
MsaG004140 AT1G74080.1 38.043 184 85 7 11 170 12 190 1.55e-31 120
MsaG004140 AT3G02940.2 52.381 105 48 2 11 115 12 114 2.65e-31 119
MsaG004140 AT3G12720.1 47.107 121 61 3 10 129 21 139 5.42e-31 119
MsaG004140 AT3G02940.1 52.381 105 48 2 11 115 12 114 6.17e-31 119
MsaG004140 AT3G02940.3 52.381 105 48 2 11 115 12 114 6.17e-31 119
MsaG004140 AT3G13890.2 48.214 112 56 2 4 115 5 114 6.35e-31 119
MsaG004140 AT1G22640.1 49.123 114 55 3 11 123 12 123 1.35e-30 116
MsaG004140 AT5G65230.1 51.304 115 53 3 11 124 12 124 1.47e-30 117
MsaG004140 AT4G37780.1 51.887 106 48 3 11 115 12 115 1.53e-30 117
MsaG004140 AT4G38620.1 50.926 108 51 2 17 123 17 123 1.71e-30 117
MsaG004140 AT4G09460.1 49.074 108 53 2 17 123 17 123 1.77e-30 115
MsaG004140 AT1G34670.1 50.435 115 54 3 11 124 12 124 2.34e-30 118
MsaG004140 AT2G31180.1 32.937 252 126 9 11 246 12 236 2.78e-30 115
MsaG004140 AT5G56110.1 47.826 115 57 3 11 124 12 124 2.90e-30 117
MsaG004140 AT1G35515.1 50.000 108 52 2 17 123 17 123 3.74e-30 114
MsaG004140 AT4G17785.2 50.926 108 51 2 8 115 10 115 4.54e-30 117
MsaG004140 AT4G17785.1 50.926 108 51 2 8 115 10 115 4.88e-30 117
MsaG004140 AT5G14750.1 50.000 104 50 2 8 111 13 114 5.46e-30 113
MsaG004140 AT4G34990.1 49.074 108 53 2 17 123 17 123 6.24e-30 115
MsaG004140 AT1G63910.1 47.826 115 58 2 4 118 5 117 6.47e-30 117
MsaG004140 AT3G28470.1 53.465 101 45 2 11 111 12 110 6.92e-30 116
MsaG004140 AT5G15310.4 48.571 105 52 2 11 115 12 114 8.00e-30 114
MsaG004140 AT4G01680.2 39.873 158 80 4 4 148 5 160 8.42e-30 116
MsaG004140 AT2G16720.1 49.074 108 53 2 17 123 17 123 1.04e-29 114
MsaG004140 AT3G01140.2 46.087 115 59 3 11 124 12 124 1.26e-29 116
MsaG004140 AT3G01140.1 46.087 115 59 3 11 124 55 167 1.38e-29 116
MsaG004140 AT3G01530.1 44.444 117 60 2 4 116 13 128 2.61e-29 112
MsaG004140 AT5G15310.1 46.087 115 59 3 11 124 12 124 2.72e-29 114
MsaG004140 AT5G15310.2 46.087 115 59 3 11 124 12 124 3.12e-29 114
MsaG004140 AT1G74650.1 48.571 105 52 2 11 115 12 114 3.48e-29 114
MsaG004140 AT3G49690.1 52.830 106 47 3 11 115 12 115 3.49e-29 114
MsaG004140 AT3G27920.1 49.074 108 53 2 8 115 11 116 3.49e-29 112
MsaG004140 AT3G27810.1 49.057 106 52 2 11 116 20 123 3.62e-29 112
MsaG004140 AT5G40350.1 48.113 106 53 2 11 116 17 120 3.93e-29 111
MsaG004140 AT1G18570.1 46.491 114 58 3 11 123 13 124 4.80e-29 114
MsaG004140 AT5G23000.1 50.467 107 50 3 10 115 11 115 5.10e-29 114
MsaG004140 AT3G23250.1 47.619 105 53 2 11 115 12 114 6.36e-29 112
MsaG004140 AT1G18710.1 44.348 115 61 3 11 124 12 124 6.67e-29 112
MsaG004140 AT5G62470.2 44.203 138 69 4 11 147 12 142 7.00e-29 114
MsaG004140 AT1G08810.1 49.524 105 51 2 11 115 12 114 7.83e-29 112
MsaG004140 AT1G16490.1 50.000 106 51 2 10 115 13 116 7.90e-29 112
MsaG004140 AT5G57620.1 50.943 106 49 3 11 115 12 115 1.11e-28 113
MsaG004140 AT3G13540.1 45.000 120 63 3 5 123 17 134 1.20e-28 111
MsaG004140 AT1G06180.1 48.624 109 54 2 11 119 12 118 1.27e-28 111
MsaG004140 AT5G40330.1 49.038 104 51 2 12 115 13 114 1.37e-28 110
MsaG004140 AT5G52600.1 48.515 101 50 2 11 111 12 110 1.54e-28 109
MsaG004140 AT1G56160.1 50.000 106 51 2 10 115 13 116 1.61e-28 112
MsaG004140 AT5G07690.1 48.571 105 52 2 11 115 12 114 1.72e-28 112
MsaG004140 AT1G79180.1 46.610 118 59 3 10 125 13 128 2.18e-28 111
MsaG004140 AT5G60890.1 33.824 204 120 7 11 201 12 213 2.22e-28 111
MsaG004140 AT2G36890.1 43.089 123 67 3 11 132 12 132 2.67e-28 111
MsaG004140 AT1G48000.1 47.059 102 53 1 17 118 37 137 3.69e-28 109
MsaG004140 AT3G47600.1 47.619 105 53 2 11 115 12 114 3.70e-28 112
MsaG004140 AT2G36890.2 43.089 123 67 3 11 132 53 173 4.39e-28 112
MsaG004140 AT5G07700.1 47.619 105 53 2 11 115 12 114 4.64e-28 111
MsaG004140 AT5G07700.2 47.619 105 53 2 11 115 12 114 4.64e-28 111
MsaG004140 AT3G13890.1 44.628 121 56 3 4 115 5 123 4.97e-28 112
MsaG004140 AT5G61420.2 45.614 114 59 3 11 123 12 123 5.25e-28 112
MsaG004140 AT1G74430.1 44.348 115 61 3 11 124 12 124 5.46e-28 110
MsaG004140 AT5G65790.1 51.887 106 48 3 11 115 12 115 5.55e-28 112
MsaG004140 AT3G28910.1 48.571 105 52 2 11 115 12 114 6.90e-28 110
MsaG004140 AT3G12820.1 49.057 106 52 2 10 115 13 116 7.89e-28 108
MsaG004140 AT2G47190.1 45.872 109 57 2 11 119 20 126 9.73e-28 109
MsaG004140 AT5G62470.1 44.203 138 68 5 11 147 12 141 1.69e-27 110
MsaG004140 AT2G47460.1 49.505 101 49 2 11 111 12 110 1.75e-27 110
MsaG004140 AT3G62610.1 44.628 121 64 3 11 130 12 130 3.40e-27 109
MsaG004140 AT1G66230.1 41.912 136 76 3 11 145 12 145 3.85e-27 108
MsaG004140 AT5G62320.1 46.281 121 55 4 11 123 13 131 4.06e-27 107
MsaG004140 AT1G25340.1 45.631 103 55 1 17 119 23 124 5.23e-27 107
MsaG004140 AT5G14340.1 47.368 114 57 3 11 123 24 135 5.32e-27 107
MsaG004140 AT5G35550.1 44.248 113 61 2 3 115 6 116 7.47e-27 106
MsaG004140 AT5G49330.1 49.505 101 49 2 11 111 12 110 7.61e-27 108
MsaG004140 AT1G68320.1 43.750 112 61 2 8 119 16 125 8.11e-27 107
MsaG004140 AT4G13480.1 49.495 99 49 1 17 115 11 108 2.80e-26 105
MsaG004140 AT5G16600.1 40.602 133 76 3 11 142 12 142 3.13e-26 106
MsaG004140 AT3G30210.1 47.059 102 53 1 17 118 32 132 4.02e-26 105
MsaG004140 AT3G60460.1 45.872 109 56 3 11 118 11 117 7.12e-26 105
MsaG004140 AT3G24310.1 47.475 99 51 1 17 115 23 120 9.18e-26 103
MsaG004140 AT3G48920.1 44.545 110 60 1 6 115 12 120 3.72e-25 102
MsaG004140 AT4G22680.1 45.217 115 60 3 11 124 12 124 5.64e-25 102
MsaG004140 AT5G52260.1 35.749 207 117 4 9 201 10 214 6.93e-24 99.0
MsaG004140 AT3G06490.1 46.789 109 56 2 11 119 19 125 7.45e-24 100
MsaG004140 AT1G66370.1 42.727 110 60 3 9 117 6 113 9.02e-24 98.2
MsaG004140 AT4G12350.1 45.714 105 55 2 11 115 12 114 1.00e-23 99.0
MsaG004140 AT1G66380.1 42.857 112 61 3 7 117 4 113 1.02e-23 95.1
MsaG004140 AT1G25340.2 43.689 103 52 2 17 119 23 119 2.06e-23 97.8
MsaG004140 AT5G26660.2 50.000 86 41 2 39 123 8 92 2.64e-23 98.6
MsaG004140 AT1G25340.3 43.689 103 52 2 17 119 23 119 2.73e-23 98.2
MsaG004140 AT4G25560.1 45.794 107 56 2 9 115 8 112 3.77e-23 97.4
MsaG004140 AT3G53200.1 45.794 107 56 2 11 117 9 113 4.87e-23 95.9
MsaG004140 AT1G79180.2 37.086 151 58 4 10 125 13 161 5.69e-23 97.8
MsaG004140 AT1G66390.1 41.964 112 62 3 7 117 4 113 7.01e-23 95.9
MsaG004140 AT1G56650.1 38.281 128 68 4 7 125 4 129 7.23e-23 95.9
MsaG004140 AT5G59780.3 42.593 108 61 1 17 124 13 119 7.48e-23 95.5
MsaG004140 AT5G49620.1 44.660 103 56 1 17 119 31 132 2.42e-22 95.5
MsaG004140 AT3G46130.1 44.444 99 54 1 17 115 14 111 2.71e-22 94.4
MsaG004140 AT3G50060.1 43.396 106 58 2 17 122 9 112 1.59e-21 93.2
MsaG004140 AT4G18770.1 40.876 137 72 5 9 139 208 341 3.67e-21 94.0
MsaG004140 AT5G49620.2 39.167 120 52 2 17 119 31 146 6.49e-21 91.7
MsaG004140 AT5G40350.2 51.351 74 35 1 43 116 3 75 1.93e-20 87.0
MsaG004140 AT4G37260.1 44.860 107 56 3 17 122 16 120 3.80e-20 89.7
MsaG004140 AT3G27810.2 52.778 72 33 1 45 116 4 74 4.76e-20 86.3
MsaG004140 AT5G58850.1 43.636 110 59 3 7 116 99 205 1.26e-19 89.4
MsaG004140 AT5G67300.1 47.000 100 50 3 17 115 9 106 1.35e-19 87.8
MsaG004140 AT3G27785.1 41.748 103 57 3 17 118 192 292 1.72e-19 89.0
MsaG004140 AT2G23290.1 45.000 100 52 3 17 115 16 113 3.59e-19 86.7
MsaG004140 AT2G25230.1 38.346 133 73 5 5 130 13 143 4.82e-19 85.1
MsaG004140 AT5G40360.1 41.414 99 56 2 17 115 161 257 4.94e-19 87.0
MsaG004140 AT5G11050.1 34.409 186 106 6 9 181 101 283 9.63e-19 86.7
MsaG004140 AT3G53200.2 52.055 73 34 1 45 117 9 80 1.24e-18 83.2
MsaG004140 AT3G12820.2 55.224 67 29 1 49 115 3 68 3.69e-18 81.6
MsaG004140 AT1G17950.1 39.450 109 62 3 17 123 8 114 4.40e-18 82.8
MsaG004140 AT2G39880.1 39.695 131 76 3 17 146 53 181 1.10e-17 83.2
MsaG004140 AT5G35550.2 52.113 71 33 1 45 115 50 119 1.63e-17 81.3
MsaG004140 AT3G55730.1 40.566 106 61 2 10 115 52 155 1.10e-16 80.5
MsaG004140 AT5G14750.3 43.373 83 41 2 38 115 3 84 1.12e-16 77.0
MsaG004140 AT3G09370.2 36.054 147 90 4 6 151 128 271 1.13e-16 80.9
MsaG004140 AT3G09370.2 37.255 102 61 2 9 110 80 178 6.71e-14 72.8
MsaG004140 AT4G33450.1 36.792 106 65 2 17 122 22 125 1.15e-16 78.6
MsaG004140 AT3G09370.3 36.054 147 90 4 6 151 136 279 1.27e-16 80.9
MsaG004140 AT3G09370.3 37.255 102 61 2 9 110 88 186 9.35e-14 72.4
MsaG004140 AT3G46130.3 48.611 72 36 1 44 115 9 79 1.43e-16 77.8
MsaG004140 AT3G09370.1 36.054 147 90 4 6 151 123 266 1.64e-16 80.5
MsaG004140 AT3G09370.1 37.255 102 61 2 9 110 75 173 8.00e-14 72.4
MsaG004140 AT5G59780.2 45.000 80 43 1 45 124 20 98 3.29e-16 76.6
MsaG004140 AT3G46130.4 49.296 71 35 1 45 115 20 89 3.93e-16 77.0
MsaG004140 AT5G17800.1 35.556 135 77 4 17 143 96 228 4.72e-16 78.2
MsaG004140 AT3G09230.1 37.000 100 61 2 17 116 58 155 5.92e-16 78.2
MsaG004140 AT3G47600.2 46.479 71 37 1 45 115 39 108 8.62e-16 77.4
MsaG004140 AT2G37630.1 40.000 110 63 2 11 118 1 109 9.34e-16 77.4
MsaG004140 AT1G26780.1 37.143 105 63 3 17 120 101 203 1.51e-15 75.9
MsaG004140 AT5G02320.3 38.182 110 65 3 6 115 60 166 1.62e-15 77.4
MsaG004140 AT5G02320.3 36.275 102 62 2 9 110 12 110 1.96e-13 71.2
MsaG004140 AT1G26780.2 37.500 104 62 3 17 119 101 202 1.75e-15 76.6
MsaG004140 AT5G02320.1 38.182 110 65 3 6 115 120 226 1.81e-15 77.4
MsaG004140 AT5G02320.1 35.849 106 57 3 9 110 72 170 2.11e-13 71.2
MsaG004140 AT5G02320.2 38.182 110 65 3 6 115 120 226 1.81e-15 77.4
MsaG004140 AT5G02320.2 35.849 106 57 3 9 110 72 170 2.11e-13 71.2
MsaG004140 AT4G00540.2 36.691 139 77 6 6 140 96 227 1.86e-15 77.0
MsaG004140 AT1G69560.2 39.000 100 56 3 17 113 126 223 1.94e-15 76.6
MsaG004140 AT1G69560.1 39.000 100 56 3 17 113 110 207 2.03e-15 76.3
MsaG004140 AT4G00540.1 36.691 139 77 6 6 140 94 225 2.05e-15 77.0
MsaG004140 AT4G32730.1 38.182 110 65 3 6 115 80 186 2.83e-15 77.0
MsaG004140 AT4G32730.1 35.514 107 57 3 9 110 31 130 3.12e-13 70.9
MsaG004140 AT4G32730.5 38.182 110 65 3 6 115 80 186 3.53e-15 77.0
MsaG004140 AT4G32730.5 35.514 107 57 3 9 110 31 130 3.76e-13 70.9
MsaG004140 AT4G32730.4 38.182 110 65 3 6 115 80 186 3.53e-15 77.0
MsaG004140 AT4G32730.4 35.514 107 57 3 9 110 31 130 3.76e-13 70.9
MsaG004140 AT4G32730.3 38.182 110 65 3 6 115 80 186 3.53e-15 77.0
MsaG004140 AT4G32730.3 35.514 107 57 3 9 110 31 130 3.76e-13 70.9
MsaG004140 AT4G32730.2 38.182 110 65 3 6 115 80 186 3.53e-15 77.0
MsaG004140 AT4G32730.2 35.514 107 57 3 9 110 31 130 3.76e-13 70.9
MsaG004140 AT1G73410.1 38.318 107 64 2 17 123 9 113 5.85e-15 73.6
MsaG004140 AT1G73410.2 38.318 107 64 2 17 123 9 113 6.41e-15 72.8
MsaG004140 AT1G66380.3 45.333 75 39 2 44 117 7 80 1.17e-14 69.3
MsaG004140 AT1G66380.2 44.118 68 37 1 7 74 4 70 2.33e-14 68.9
MsaG004140 AT3G29020.1 38.462 104 59 3 17 117 68 169 2.45e-14 71.6
MsaG004140 AT3G29020.2 38.462 104 59 3 17 117 70 171 3.75e-14 72.4
MsaG004140 AT5G11510.2 34.545 110 69 3 6 115 74 180 4.26e-14 73.6
MsaG004140 AT5G11510.2 35.294 102 64 2 9 110 25 124 1.17e-12 69.3
MsaG004140 AT5G11510.3 34.545 110 69 3 6 115 74 180 4.53e-14 73.6
MsaG004140 AT5G11510.3 35.294 102 64 2 9 110 25 124 1.18e-12 69.3
MsaG004140 AT5G11510.1 34.545 110 69 3 6 115 74 180 4.53e-14 73.6
MsaG004140 AT5G11510.1 35.294 102 64 2 9 110 25 124 1.18e-12 69.3
MsaG004140 AT5G11510.4 34.545 110 69 3 6 115 74 180 4.53e-14 73.6
MsaG004140 AT5G11510.4 35.294 102 64 2 9 110 25 124 1.18e-12 69.3
MsaG004140 AT5G11510.5 34.545 110 69 3 6 115 74 180 4.74e-14 73.6
MsaG004140 AT5G11510.5 35.294 102 64 2 9 110 25 124 1.40e-12 68.9
MsaG004140 AT1G14350.2 35.398 113 71 2 7 119 18 128 6.31e-14 72.4
MsaG004140 AT1G14350.1 35.398 113 71 2 7 119 18 128 6.31e-14 72.4
MsaG004140 AT2G02820.2 34.513 113 72 2 7 119 23 133 2.10e-13 71.2
MsaG004140 AT2G02820.1 34.513 113 72 2 7 119 23 133 2.10e-13 70.9
MsaG004140 AT5G40430.1 37.168 113 64 4 7 115 43 152 2.85e-13 68.9
MsaG004140 AT2G02820.3 36.893 103 63 2 17 119 33 133 4.39e-13 69.3
MsaG004140 AT1G22640.3 51.515 66 30 2 59 123 2 66 2.20e-12 65.5
MsaG004140 AT3G18100.3 39.604 101 52 4 12 109 497 591 4.77e-12 67.4
MsaG004140 AT3G18100.4 39.604 101 52 4 12 109 384 478 5.11e-12 67.0
MsaG004140 AT3G18100.2 39.604 101 52 4 12 109 332 426 5.21e-12 67.0
MsaG004140 AT3G18100.1 39.604 101 52 4 12 109 545 639 5.52e-12 67.0
MsaG004140 AT5G39700.1 37.864 103 62 2 9 111 51 151 6.04e-12 63.9

Find 72 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTTTGAAAACTGCTTATT+TGG 0.060651 1:-66098385 None:intergenic
ACATAATGAATCCGGAATTT+TGG 0.151632 1:+66098691 MsaT004140.1:CDS
AAGATACCAGAAGTTAAATT+TGG 0.198102 1:+66098328 MsaT004140.1:CDS
CATCGTTGGTTACTAATAAA+AGG 0.209811 1:+66097694 MsaT004140.1:CDS
TGATACCTCCTTCCAATTTC+CGG 0.211449 1:-66097787 None:intergenic
GGAACCCTTATACGGATATT+TGG 0.228598 1:+66098938 MsaT004140.1:CDS
CTACTTCAACTTTGATTGAT+AGG 0.246409 1:+66098467 MsaT004140.1:CDS
TCAAACCAAATATCCGTATA+AGG 0.249713 1:-66098943 None:intergenic
AAAGTTCTTGATGTCATTAT+CGG 0.301665 1:-66098176 None:intergenic
CCTTTGGAGAACGATGAAAA+AGG 0.312790 1:+66098624 MsaT004140.1:CDS
ATAATGACATCAAGAACTTT+TGG 0.313765 1:+66098179 MsaT004140.1:CDS
CATTGTCATGCAAGTGTCTA+AGG 0.322693 1:-66098790 None:intergenic
TTTGAGTTATGTTCTAAGTT+TGG 0.324176 1:+66097921 MsaT004140.1:CDS
ACCAGTTCCATTATGTTGTC+AGG 0.338387 1:-66098247 None:intergenic
TGGTTTGAGGAACCCTTATA+CGG 0.340488 1:+66098930 MsaT004140.1:CDS
AACGTGTCATTCCAAAATTC+CGG 0.354522 1:-66098702 None:intergenic
ATGTCATTATCGGTTCTTCC+AGG 0.362890 1:-66098166 None:intergenic
ACTTTGAAAACTGCTTATTT+GGG 0.369164 1:-66098384 None:intergenic
TGATTTCCAAATTTAACTTC+TGG 0.372019 1:-66098334 None:intergenic
CTGGAAGAAGGCAATTGCTT+TGG 0.394386 1:+66098878 MsaT004140.1:CDS
ACCCTTCCCTGACAACATAA+TGG 0.401390 1:+66098240 MsaT004140.1:CDS
CTAAGTTTGGTGAGTTCAAA+TGG 0.403243 1:+66097934 MsaT004140.1:CDS
GAAGAAGGCAATTGCTTTGG+AGG 0.406913 1:+66098881 MsaT004140.1:CDS
TTGATGAAAGCCAGGTCATT+TGG 0.408351 1:+66098910 MsaT004140.1:CDS
CAAACCAAATATCCGTATAA+GGG 0.421526 1:-66098942 None:intergenic
TCTTCTTCTTCTTTACTAAA+CGG 0.425038 1:-66097891 None:intergenic
AAGGCATCATTAAAATCATA+TGG 0.427844 1:-66098771 None:intergenic
GCCTCCACTCCCACCACCTA+TGG 0.431643 1:+66098824 MsaT004140.1:CDS
CCCTGACAACATAATGGAAC+TGG 0.441688 1:+66098246 MsaT004140.1:CDS
AAGCCAGGTCATTTGGTTTG+AGG 0.452339 1:+66098917 MsaT004140.1:CDS
GGAAGAAGGGAAGAAGCCTT+TGG 0.456662 1:+66098608 MsaT004140.1:CDS
GTCTCCATAGGTGGTGGGAG+TGG 0.457379 1:-66098828 None:intergenic
TTCATCGATTTCAGGGAAGA+AGG 0.458892 1:+66098594 MsaT004140.1:intron
GGTTGAAGAAAGGAACATTA+TGG 0.458991 1:+66097715 MsaT004140.1:CDS
AACGGACCCTTCTTTACATC+AGG 0.460974 1:-66097873 None:intergenic
AGATGTCAGAGATAAATAAC+TGG 0.463955 1:+66098859 MsaT004140.1:CDS
AACATAATGGAACTGGTTGA+TGG 0.486232 1:+66098253 MsaT004140.1:CDS
TCTACGACCTGATGTAAAGA+AGG 0.489579 1:+66097866 MsaT004140.1:CDS
TCCATTATGTTGTCAGGGAA+GGG 0.491147 1:-66098241 None:intergenic
TTCCATTATGTTGTCAGGGA+AGG 0.494749 1:-66098242 None:intergenic
ACATGACGACATAATGAATC+CGG 0.500403 1:+66098683 MsaT004140.1:CDS
CACTTGCATGACAATGCAAT+CGG 0.503317 1:+66098797 MsaT004140.1:CDS
GAGTATTATACCATCTAAAA+CGG 0.511421 1:-66097845 None:intergenic
TTATTAGTAACCAACGATGA+AGG 0.514942 1:-66097690 None:intergenic
AAGGCAATTGCTTTGGAGGA+AGG 0.515313 1:+66098885 MsaT004140.1:CDS
GATGGTTTGAAGAGTAGTAA+TGG 0.516640 1:+66098271 MsaT004140.1:CDS
TCCATAGGTGGTGGGAGTGG+AGG 0.516845 1:-66098825 None:intergenic
ACTAATAAAAGGTTGAAGAA+AGG 0.530614 1:+66097705 MsaT004140.1:CDS
GGAAGGTGTTGATGAAAGCC+AGG 0.532700 1:+66098902 MsaT004140.1:CDS
AGAGATAAATAACTGGAAGA+AGG 0.539212 1:+66098866 MsaT004140.1:CDS
GCTTCAACATCGTTCTCCAA+AGG 0.546850 1:-66098654 None:intergenic
GATTCATTATGTCGTCATGT+AGG 0.551510 1:-66098680 None:intergenic
TGTTGTGTCTCCATAGGTGG+TGG 0.552970 1:-66098834 None:intergenic
CCAGTTCCATTATGTTGTCA+GGG 0.557866 1:-66098246 None:intergenic
TAACATCATGCCTTCATCGT+TGG 0.558999 1:+66097680 None:intergenic
AAATATGTTCTTCAATAACG+TGG 0.564732 1:+66098420 MsaT004140.1:CDS
TCATCGATTTCAGGGAAGAA+GGG 0.571612 1:+66098595 MsaT004140.1:intron
TGAGTTCAAATGGTCTAAGA+TGG 0.574582 1:+66097944 MsaT004140.1:CDS
ACATGGAACCGGAAATTGGA+AGG 0.586011 1:+66097779 MsaT004140.1:CDS
AATATGTTCTTCAATAACGT+GGG 0.595420 1:+66098421 MsaT004140.1:CDS
ATCTGATGTTGTGTCTCCAT+AGG 0.603150 1:-66098840 None:intergenic
ATGGTCTAAGATGGCTCTCG+AGG 0.607145 1:+66097953 MsaT004140.1:CDS
GTTCAGCACATTAGTCAATG+AGG 0.611190 1:+66098722 MsaT004140.1:CDS
TGATGTTGTGTCTCCATAGG+TGG 0.616221 1:-66098837 None:intergenic
GTTGTGTCTCCATAGGTGGT+GGG 0.620759 1:-66098833 None:intergenic
GTTCCTCAAACCAAATGACC+TGG 0.626263 1:-66098920 None:intergenic
CTACGACCTGATGTAAAGAA+GGG 0.647996 1:+66097867 MsaT004140.1:CDS
GAAGGAGGTATCAAAGAACA+CGG 0.666684 1:+66097797 MsaT004140.1:CDS
AAAAGAAAACATGAAAGACA+TGG 0.669709 1:+66098211 MsaT004140.1:CDS
TGGAACCGGAAATTGGAAGG+AGG 0.696666 1:+66097782 MsaT004140.1:CDS
AACACGGGACTTGCACACTG+TGG 0.714946 1:+66097813 MsaT004140.1:CDS
AAGGAGGTATCAAAGAACAC+GGG 0.739276 1:+66097798 MsaT004140.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 66097687 66098965 66097687 ID=MsaG004140
Chr1 mRNA 66097687 66098965 66097687 ID=MsaT004140.1;Parent=MsaG004140
Chr1 exon 66097687 66097974 66097687 ID=MsaT004140.1.exon1;Parent=MsaT004140.1
Chr1 CDS 66097687 66097974 66097687 ID=cds.MsaT004140.1;Parent=MsaT004140.1
Chr1 exon 66098163 66098488 66098163 ID=MsaT004140.1.exon2;Parent=MsaT004140.1
Chr1 CDS 66098163 66098488 66098163 ID=cds.MsaT004140.1;Parent=MsaT004140.1
Chr1 exon 66098608 66098965 66098608 ID=MsaT004140.1.exon3;Parent=MsaT004140.1
Chr1 CDS 66098608 66098965 66098608 ID=cds.MsaT004140.1;Parent=MsaT004140.1
Gene Sequence

>MsaT004140.1

ATGCCTTCATCGTTGGTTACTAATAAAAGGTTGAAGAAAGGAACATTATGGTCAGAAGAAGAAGATGAAATATTAAAAGCATATGTTGAAAAACATGGAACCGGAAATTGGAAGGAGGTATCAAAGAACACGGGACTTGCACACTGTGGAAGAAGTTGCCGTTTTAGATGGTATAATACTCTACGACCTGATGTAAAGAAGGGTCCGTTTAGTAAAGAAGAAGAAGAGAAATTCTTTGAGTTATGTTCTAAGTTTGGTGAGTTCAAATGGTCTAAGATGGCTCTCGAGATGCCTGGAAGAACCGATAATGACATCAAGAACTTTTGGAATGCAAGAAAAAGAAAACATGAAAGACATGGCTTGTCACCCTTCCCTGACAACATAATGGAACTGGTTGATGGTTTGAAGAGTAGTAATGGAAAAAGAATAAGGAATTCACAAGAAAACAAATTTAAGATACCAGAAGTTAAATTTGGAAATCAAATTCTGCATACAAACTTGTCTGATCTCCCAAATAAGCAGTTTTCAAAGTTGATTGATGATTCAAATATGTTCTTCAATAACGTGGGAAGTACTTCTACAAGCAATCATACTACTTCAACTTTGATTGATAGGGAAGAAGGGAAGAAGCCTTTGGAGAACGATGAAAAAGGGAAGAAGCCTTTGGAGAACGATGTTGAAGCAAACCTACATGACGACATAATGAATCCGGAATTTTGGAATGACACGTTCAGCACATTAGTCAATGAGGTTTACAATGACTTGCATGACAAGCTTCCATATGATTTTAATGATGCCTTAGACACTTGCATGACAATGCAATCGGATCTGCCTCCACTCCCACCACCTATGGAGACACAACATCAGATGTCAGAGATAAATAACTGGAAGAAGGCAATTGCTTTGGAGGAAGGTGTTGATGAAAGCCAGGTCATTTGGTTTGAGGAACCCTTATACGGATATTTGGTTTGA
Protein sequence

>MsaT004140.1

MPSSLVTNKRLKKGTLWSEEEDEILKAYVEKHGTGNWKEVSKNTGLAHCGRSCRFRWYNTLRPDVKKGPFSKEEEEKFFELCSKFGEFKWSKMALEMPGRTDNDIKNFWNARKRKHERHGLSPFPDNIMELVDGLKSSNGKRIRNSQENKFKIPEVKFGNQILHTNLSDLPNKQFSKLIDDSNMFFNNVGSTSTSNHTTSTLIDREEGKKPLENDEKGKKPLENDVEANLHDDIMNPEFWNDTFSTLVNEVYNDLHDKLPYDFNDALDTCMTMQSDLPPLPPPMETQHQMSEINNWKKAIALEEGVDESQVIWFEEPLYGYLV*