AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG004141

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG004141 MtrunA17_Chr5g0441131 68.780 205 41 4 2 205 3 185 1.10e-80 243
MsaG004141 MtrunA17_Chr5g0440761 56.612 242 77 8 12 236 13 243 9.77e-77 236
MsaG004141 MtrunA17_Chr5g0441141 52.747 273 94 10 12 259 13 275 3.33e-75 232
MsaG004141 MtrunA17_Chr5g0440781 62.371 194 56 6 12 205 13 189 1.57e-71 219
MsaG004141 MtrunA17_Chr1g0193901 89.691 97 10 0 1 97 1 97 7.08e-48 156
MsaG004141 MtrunA17_Chr1g0193891 89.691 97 10 0 1 97 1 97 7.08e-48 156
MsaG004141 MtrunA17_Chr1g0193871 89.691 97 10 0 1 97 1 97 7.08e-48 156
MsaG004141 MtrunA17_Chr1g0193881 89.691 97 10 0 1 97 1 97 7.08e-48 156
MsaG004141 MtrunA17_Chr1g0192411 46.316 190 93 6 10 193 11 197 2.00e-39 143
MsaG004141 MtrunA17_Chr8g0354661 40.000 200 104 7 11 197 37 233 1.51e-38 143
MsaG004141 MtrunA17_Chr1g0154031 45.665 173 84 6 11 179 76 242 8.97e-38 139
MsaG004141 MtrunA17_Chr3g0099131 56.034 116 49 2 11 126 41 154 6.35e-37 139
MsaG004141 MtrunA17_Chr5g0425591 72.941 85 22 1 12 96 10 93 1.11e-36 127
MsaG004141 MtrunA17_Chr4g0048511 53.719 121 53 3 8 127 10 128 3.33e-36 133
MsaG004141 MtrunA17_Chr2g0281071 55.556 117 49 3 8 123 10 124 9.27e-36 132
MsaG004141 MtrunA17_Chr3g0080861 49.606 127 61 3 11 136 37 161 1.26e-35 135
MsaG004141 MtrunA17_Chr2g0323411 55.263 114 48 3 11 123 12 123 3.23e-35 130
MsaG004141 MtrunA17_Chr2g0322521 55.085 118 51 2 11 128 29 144 5.47e-35 131
MsaG004141 MtrunA17_Chr4g0032401 54.128 109 48 2 7 115 13 119 1.28e-33 126
MsaG004141 MtrunA17_Chr7g0270891 44.444 153 80 4 4 155 5 153 1.39e-33 127
MsaG004141 MtrunA17_Chr5g0410961 56.190 105 44 2 11 115 12 114 4.56e-33 125
MsaG004141 MtrunA17_Chr1g0187761 53.333 105 47 2 11 115 12 114 6.57e-33 122
MsaG004141 MtrunA17_Chr1g0193371 49.587 121 58 3 4 123 5 123 9.17e-33 124
MsaG004141 MtrunA17_Chr7g0274581 51.429 105 49 2 11 115 12 114 1.25e-32 120
MsaG004141 MtrunA17_Chr1g0193801 41.250 160 85 5 4 162 5 156 1.43e-32 124
MsaG004141 MtrunA17_Chr3g0117091 47.692 130 60 4 9 132 10 137 1.82e-32 123
MsaG004141 MtrunA17_Chr5g0395281 52.174 115 52 3 11 124 12 124 1.83e-32 122
MsaG004141 MtrunA17_Chr1g0151941 34.842 221 118 8 9 214 10 219 2.18e-32 120
MsaG004141 MtrunA17_Chr3g0115821 51.304 115 53 3 11 124 12 124 2.37e-32 123
MsaG004141 MtrunA17_Chr2g0328771 53.333 105 47 2 11 115 20 122 3.99e-32 122
MsaG004141 MtrunA17_Chr1g0203411 47.748 111 56 2 11 121 12 120 6.41e-32 120
MsaG004141 MtrunA17_Chr4g0039971 51.304 115 53 3 11 124 13 125 1.00e-31 121
MsaG004141 MtrunA17_Chr1g0211161 47.934 121 60 3 4 123 6 124 1.09e-31 118
MsaG004141 MtrunA17_Chr1g0167691 50.000 108 52 2 9 116 10 115 1.58e-31 118
MsaG004141 MtrunA17_Chr3g0088461 50.000 110 53 2 6 115 17 124 1.93e-31 120
MsaG004141 MtrunA17_Chr7g0271241 52.336 107 49 2 4 110 5 109 2.56e-31 120
MsaG004141 MtrunA17_Chr3g0103281 41.892 148 78 4 11 152 12 157 3.29e-31 119
MsaG004141 MtrunA17_Chr4g0058631 47.107 121 61 3 4 123 5 123 4.79e-31 120
MsaG004141 MtrunA17_Chr4g0022931 46.789 109 56 2 11 119 13 119 9.02e-31 117
MsaG004141 MtrunA17_Chr4g0068061 41.935 155 79 4 11 156 12 164 1.06e-30 118
MsaG004141 MtrunA17_Chr4g0022901 43.066 137 68 4 11 147 13 139 1.17e-30 117
MsaG004141 MtrunA17_Chr2g0323351 50.476 105 50 2 11 115 12 114 1.48e-30 115
MsaG004141 MtrunA17_Chr4g0042671 48.246 114 56 3 11 123 12 123 1.68e-30 119
MsaG004141 MtrunA17_Chr8g0385321 50.926 108 51 2 17 123 17 123 1.69e-30 117
MsaG004141 MtrunA17_Chr1g0167661 50.467 107 51 2 9 115 10 114 1.72e-30 115
MsaG004141 MtrunA17_Chr2g0309911 42.657 143 73 4 1 142 1 135 2.56e-30 117
MsaG004141 MtrunA17_Chr7g0217741 46.957 115 58 3 11 124 12 124 2.82e-30 116
MsaG004141 MtrunA17_Chr8g0387421 46.957 115 59 2 4 118 5 117 3.82e-30 116
MsaG004141 MtrunA17_Chr8g0342521 47.107 121 61 3 4 123 5 123 4.63e-30 117
MsaG004141 MtrunA17_Chr4g0022911 41.379 145 68 4 11 147 13 148 4.69e-30 115
MsaG004141 MtrunA17_Chr5g0397231 48.148 108 54 2 4 111 5 110 5.97e-30 116
MsaG004141 MtrunA17_Chr4g0037141 49.074 108 53 2 17 123 17 123 6.33e-30 115
MsaG004141 MtrunA17_Chr1g0152011 52.830 106 47 3 11 115 12 115 7.66e-30 116
MsaG004141 MtrunA17_Chr6g0452271 43.262 141 76 4 11 149 12 150 1.01e-29 115
MsaG004141 MtrunA17_Chr6g0450101 44.628 121 65 2 11 131 14 132 1.08e-29 112
MsaG004141 MtrunA17_Chr5g0400821 51.887 106 48 3 11 115 12 115 1.30e-29 115
MsaG004141 MtrunA17_Chr6g0453751 60.204 98 30 2 7 96 16 112 1.45e-29 109
MsaG004141 MtrunA17_Chr5g0435101 36.364 154 95 3 1 153 1 152 1.73e-29 112
MsaG004141 MtrunA17_Chr3g0131121 49.074 108 53 2 17 123 17 123 1.77e-29 114
MsaG004141 MtrunA17_Chr2g0330041 45.455 121 63 3 4 123 5 123 1.87e-29 116
MsaG004141 MtrunA17_Chr6g0453471 46.087 115 59 3 11 124 12 124 2.07e-29 115
MsaG004141 MtrunA17_Chr8g0342541 46.429 112 58 2 4 115 5 114 2.80e-29 114
MsaG004141 MtrunA17_Chr1g0194301 48.624 109 54 2 11 119 33 139 2.87e-29 113
MsaG004141 MtrunA17_Chr8g0349261 49.533 107 51 3 11 116 13 117 3.06e-29 113
MsaG004141 MtrunA17_Chr7g0228231 48.113 106 53 2 11 116 14 117 3.32e-29 111
MsaG004141 MtrunA17_Chr1g0209661 32.645 242 119 9 11 226 27 250 3.50e-29 114
MsaG004141 MtrunA17_Chr4g0022881 49.038 104 51 2 12 115 13 114 3.56e-29 112
MsaG004141 MtrunA17_Chr2g0327351 53.922 102 44 3 11 111 12 111 3.90e-29 114
MsaG004141 MtrunA17_Chr4g0028311 51.887 106 48 3 11 115 12 115 5.09e-29 113
MsaG004141 MtrunA17_Chr4g0054391 53.465 101 44 3 11 110 12 110 5.09e-29 113
MsaG004141 MtrunA17_Chr6g0453211 50.495 101 48 2 11 111 12 110 8.62e-29 112
MsaG004141 MtrunA17_Chr7g0254411 49.524 105 51 2 11 115 12 114 8.74e-29 113
MsaG004141 MtrunA17_Chr4g0060721 50.000 106 50 3 11 115 13 116 1.37e-28 112
MsaG004141 MtrunA17_Chr8g0343831 49.515 103 50 2 9 111 6 106 1.55e-28 110
MsaG004141 MtrunA17_Chr7g0264641 50.943 106 49 3 11 115 12 115 1.96e-28 110
MsaG004141 MtrunA17_Chr3g0135311 42.759 145 73 5 11 149 12 152 2.01e-28 112
MsaG004141 MtrunA17_Chr1g0203441 50.459 109 52 2 7 115 9 115 2.24e-28 110
MsaG004141 MtrunA17_Chr3g0092401 48.571 105 52 2 11 115 13 115 4.20e-28 110
MsaG004141 MtrunA17_Chr4g0070641 48.421 95 48 1 17 111 17 110 4.30e-28 107
MsaG004141 MtrunA17_Chr1g0186061 46.429 112 58 2 4 115 13 122 4.49e-28 109
MsaG004141 MtrunA17_Chr1g0194951 43.066 137 73 3 11 144 12 146 5.11e-28 112
MsaG004141 MtrunA17_Chr4g0055981 44.248 113 61 2 7 119 51 161 5.51e-28 108
MsaG004141 MtrunA17_Chr3g0121241 46.491 114 58 3 11 123 42 153 5.80e-28 110
MsaG004141 MtrunA17_Chr8g0346561 49.474 95 47 1 17 111 17 110 6.21e-28 110
MsaG004141 MtrunA17_Chr7g0217221 47.619 105 53 2 11 115 12 114 6.29e-28 109
MsaG004141 MtrunA17_Chr7g0261281 47.619 105 53 2 11 115 12 114 8.13e-28 109
MsaG004141 MtrunA17_Chr7g0275911 46.316 95 50 1 17 111 17 110 9.34e-28 108
MsaG004141 MtrunA17_Chr4g0013361 39.205 176 90 7 11 180 10 174 1.04e-27 109
MsaG004141 MtrunA17_Chr6g0470971 38.854 157 84 4 6 155 9 160 1.96e-27 108
MsaG004141 MtrunA17_Chr4g0072751 50.980 102 47 3 11 111 12 111 2.61e-27 109
MsaG004141 MtrunA17_Chr4g0070611 47.525 101 51 2 11 111 12 110 2.68e-27 108
MsaG004141 MtrunA17_Chr4g0022891 38.621 145 81 3 11 155 12 148 3.15e-27 107
MsaG004141 MtrunA17_Chr6g0487491 44.538 119 57 3 10 120 11 128 3.24e-27 107
MsaG004141 MtrunA17_Chr1g0180391 41.606 137 78 2 11 147 19 153 3.95e-27 106
MsaG004141 MtrunA17_Chr4g0072451 43.750 160 40 7 1 158 1 112 5.54e-27 103
MsaG004141 MtrunA17_Chr2g0311221 51.961 102 47 2 10 111 13 112 6.72e-27 108
MsaG004141 MtrunA17_Chr7g0228891 46.957 115 58 3 11 124 12 124 9.74e-27 106
MsaG004141 MtrunA17_Chr1g0168661 47.475 99 51 1 17 115 26 123 2.29e-26 105
MsaG004141 MtrunA17_Chr3g0110351 44.167 120 64 3 11 129 12 129 4.94e-26 105
MsaG004141 MtrunA17_Chr1g0194291 44.037 109 59 2 11 119 21 127 6.74e-26 103
MsaG004141 MtrunA17_Chr5g0434571 46.087 115 59 3 11 124 48 160 6.85e-26 105
MsaG004141 MtrunA17_Chr4g0044421 46.602 103 53 2 13 115 14 114 9.34e-26 101
MsaG004141 MtrunA17_Chr7g0240821 45.918 98 52 1 14 111 3 99 1.01e-25 102
MsaG004141 MtrunA17_Chr8g0342481 44.248 113 60 3 4 115 5 115 1.03e-25 105
MsaG004141 MtrunA17_Chr5g0417821 46.491 114 58 3 11 123 7 118 1.51e-25 103
MsaG004141 MtrunA17_Chr7g0269831 52.475 101 46 2 11 111 12 110 2.10e-25 104
MsaG004141 MtrunA17_Chr4g0057031 44.348 115 61 3 11 124 12 124 2.78e-25 102
MsaG004141 MtrunA17_Chr3g0099141 57.143 84 34 2 11 94 40 121 7.94e-25 97.8
MsaG004141 MtrunA17_Chr8g0334881 44.954 109 57 3 11 118 10 116 2.72e-24 100
MsaG004141 MtrunA17_Chr2g0293911 44.954 109 58 2 11 119 24 130 3.95e-24 100
MsaG004141 MtrunA17_Chr5g0434931 42.857 105 58 2 11 115 35 137 4.84e-24 99.4
MsaG004141 MtrunA17_Chr5g0434841 45.714 105 55 2 11 115 20 122 1.70e-23 98.6
MsaG004141 MtrunA17_Chr5g0434911 42.056 107 60 2 9 115 19 123 5.43e-23 96.3
MsaG004141 MtrunA17_Chr4g0068921 44.762 105 56 2 11 115 24 126 5.63e-23 94.4
MsaG004141 MtrunA17_Chr8g0360111 43.564 101 55 2 11 111 25 123 6.51e-23 95.9
MsaG004141 MtrunA17_Chr5g0434831 43.810 105 57 2 11 115 7 109 1.02e-22 93.6
MsaG004141 MtrunA17_Chr7g0247131 50.617 81 38 2 44 123 10 89 1.84e-22 94.7
MsaG004141 MtrunA17_Chr2g0327821 41.818 110 62 2 6 115 1 108 5.20e-22 92.8
MsaG004141 MtrunA17_Chr6g0454921 46.809 94 48 2 17 110 18 109 1.27e-21 90.9
MsaG004141 MtrunA17_Chr7g0220341 42.718 103 55 3 11 111 25 125 1.39e-21 92.4
MsaG004141 MtrunA17_Chr7g0228991 40.952 105 60 2 11 115 29 131 2.16e-21 92.0
MsaG004141 MtrunA17_Chr4g0030881 37.984 129 68 4 5 123 1 127 2.60e-21 91.3
MsaG004141 MtrunA17_Chr5g0401731 47.000 100 50 3 17 115 18 115 2.74e-21 92.4
MsaG004141 MtrunA17_Chr3g0133601 41.509 106 60 2 17 122 40 143 2.79e-21 90.5
MsaG004141 MtrunA17_Chr2g0323321 46.512 86 45 1 1 86 1 85 7.42e-21 86.3
MsaG004141 MtrunA17_Chr4g0058991 28.631 241 146 7 17 235 212 448 8.79e-21 92.4
MsaG004141 MtrunA17_Chr4g0042611 49.351 77 38 1 10 86 11 86 1.80e-20 84.3
MsaG004141 MtrunA17_Chr5g0395221 47.674 86 44 1 1 86 2 86 3.89e-20 83.6
MsaG004141 MtrunA17_Chr3g0117511 40.541 111 62 3 17 125 186 294 9.12e-20 89.4
MsaG004141 MtrunA17_Chr6g0460661 40.566 106 61 2 17 122 19 122 1.24e-19 84.3
MsaG004141 MtrunA17_Chr8g0342511 50.633 79 39 0 8 86 8 86 1.44e-19 82.4
MsaG004141 MtrunA17_Chr4g0008551 40.952 105 60 2 17 121 41 143 2.36e-19 87.4
MsaG004141 MtrunA17_Chr5g0429661 41.284 109 61 3 7 115 116 221 2.39e-19 87.4
MsaG004141 MtrunA17_Chr6g0480581 40.196 102 56 3 17 115 7 106 4.36e-18 82.0
MsaG004141 MtrunA17_Chr4g0053431 44.000 100 53 3 17 115 8 105 5.37e-18 82.4
MsaG004141 MtrunA17_Chr8g0342531 47.436 78 40 1 4 81 5 81 8.84e-18 79.3
MsaG004141 MtrunA17_Chr2g0294811 48.684 76 38 1 11 86 12 86 1.12e-17 77.8
MsaG004141 MtrunA17_Chr7g0228401 35.772 123 53 3 16 114 257 377 9.50e-17 80.9
MsaG004141 MtrunA17_Chr5g0397841 41.905 105 58 3 6 110 103 204 1.65e-16 80.1
MsaG004141 MtrunA17_Chr7g0238651 38.182 110 65 2 11 118 4 112 2.14e-16 79.0
MsaG004141 MtrunA17_Chr5g0437321 41.053 95 54 2 17 111 22 114 4.10e-16 77.4
MsaG004141 MtrunA17_Chr8g0342461 45.238 84 44 2 4 86 5 87 5.01e-16 73.9
MsaG004141 MtrunA17_Chr7g0238631 34.194 155 92 5 6 153 106 257 5.39e-16 78.6
MsaG004141 MtrunA17_Chr7g0238631 33.333 102 65 2 9 110 58 156 2.56e-12 67.4
MsaG004141 MtrunA17_Chr4g0042501 39.423 104 58 3 17 117 108 209 6.53e-16 78.2
MsaG004141 MtrunA17_Chr8g0342471 45.238 84 44 2 4 86 5 87 1.41e-15 72.8
MsaG004141 MtrunA17_Chr1g0157731 37.273 110 66 3 6 115 84 190 1.97e-15 77.4
MsaG004141 MtrunA17_Chr1g0157731 35.514 107 57 3 9 110 35 134 1.44e-13 71.6
MsaG004141 MtrunA17_Chr3g0139671 37.273 110 66 3 6 115 78 184 2.57e-15 77.0
MsaG004141 MtrunA17_Chr3g0139671 37.383 107 55 3 9 110 29 128 3.76e-14 73.2
MsaG004141 MtrunA17_Chr5g0417621 38.462 104 59 3 17 117 137 238 2.93e-15 76.3
MsaG004141 MtrunA17_Chr3g0125801 40.385 104 57 3 17 117 19 120 3.17e-15 74.7
MsaG004141 MtrunA17_Chr7g0228531 38.614 101 59 2 17 117 223 320 4.53e-15 75.5
MsaG004141 MtrunA17_Chr6g0460671 36.752 117 72 2 8 124 93 207 9.95e-15 73.9
MsaG004141 MtrunA17_Chr7g0229101 46.479 71 37 1 44 114 4 73 3.69e-14 70.5
MsaG004141 MtrunA17_Chr7g0254261 32.051 156 104 2 17 172 92 245 4.70e-14 72.0
MsaG004141 MtrunA17_Chr3g0093811 39.560 91 50 3 37 123 4 93 8.33e-14 70.5
MsaG004141 MtrunA17_Chr1g0177901 42.857 91 50 2 24 114 4 92 9.40e-14 69.3
MsaG004141 MtrunA17_Chr7g0229131 43.056 72 40 1 44 115 4 74 1.04e-13 68.2
MsaG004141 MtrunA17_Chr7g0228481 38.776 98 57 2 17 114 223 317 2.82e-13 70.1
MsaG004141 MtrunA17_Chr5g0416341 32.117 137 86 3 7 143 19 148 4.67e-13 69.7
MsaG004141 MtrunA17_Chr5g0434901 42.029 69 39 1 46 114 7 74 9.24e-13 64.3
MsaG004141 MtrunA17_Chr8g0362231 29.565 115 79 2 7 121 15 127 4.61e-11 63.5
MsaG004141 MtrunA17_Chr7g0233061 41.538 65 37 1 50 114 213 276 8.81e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG004141 AT2G26960.1 45.912 159 75 4 9 158 18 174 2.80e-39 143
MsaG004141 AT5G55020.1 54.622 119 52 2 11 129 26 142 1.45e-38 143
MsaG004141 AT2G32460.2 44.099 161 78 3 6 166 1 149 1.16e-37 140
MsaG004141 AT2G32460.1 43.030 165 82 3 2 166 9 161 1.58e-37 140
MsaG004141 AT3G11440.2 54.237 118 52 2 11 128 41 156 8.36e-37 137
MsaG004141 AT4G26930.1 53.913 115 51 2 11 125 19 131 8.40e-37 136
MsaG004141 AT4G21440.1 36.596 235 140 7 11 243 12 239 1.13e-36 135
MsaG004141 AT2G26950.1 47.482 139 72 1 5 143 9 146 1.69e-36 135
MsaG004141 AT5G06100.1 54.783 115 50 2 11 125 32 144 2.10e-36 136
MsaG004141 AT3G11440.3 54.237 118 52 2 11 128 41 156 2.18e-36 137
MsaG004141 AT3G11440.4 54.237 118 52 2 11 128 41 156 2.18e-36 137
MsaG004141 AT3G11440.1 54.237 118 52 2 11 128 41 156 2.18e-36 137
MsaG004141 AT5G06100.5 54.783 115 50 2 11 125 32 144 4.60e-36 136
MsaG004141 AT5G06100.2 54.783 115 50 2 11 125 32 144 4.60e-36 136
MsaG004141 AT5G06100.3 54.783 115 50 2 11 125 32 144 4.60e-36 136
MsaG004141 AT5G06100.4 54.783 115 50 2 11 125 32 144 4.60e-36 136
MsaG004141 AT5G54230.1 42.604 169 90 4 11 174 12 178 1.84e-35 131
MsaG004141 AT4G28110.1 54.386 114 49 3 11 123 12 123 5.05e-34 126
MsaG004141 AT5G26660.1 50.413 121 57 3 4 123 5 123 1.05e-33 127
MsaG004141 AT4G05100.1 54.386 114 49 3 11 123 13 124 1.22e-33 126
MsaG004141 AT4G01680.3 42.466 146 81 3 4 148 5 148 2.65e-33 123
MsaG004141 AT4G01680.1 42.466 146 81 3 4 148 5 148 2.08e-32 123
MsaG004141 AT1G57560.2 49.180 122 59 3 4 124 5 124 3.10e-32 121
MsaG004141 AT3G61250.1 49.123 114 55 3 11 123 12 123 5.27e-32 121
MsaG004141 AT1G57560.1 49.180 122 59 3 4 124 5 124 6.19e-32 121
MsaG004141 AT5G16770.4 52.381 105 48 2 11 115 12 114 7.53e-32 121
MsaG004141 AT5G16770.3 52.381 105 48 2 11 115 12 114 7.53e-32 121
MsaG004141 AT5G12870.1 49.138 116 57 2 1 116 8 121 1.14e-31 120
MsaG004141 AT5G10280.1 52.174 115 52 3 11 124 12 124 1.18e-31 121
MsaG004141 AT5G16770.1 52.381 105 48 2 11 115 12 114 1.69e-31 120
MsaG004141 AT5G16770.2 52.381 105 48 2 11 115 12 114 1.69e-31 120
MsaG004141 AT1G74080.1 38.043 184 85 7 11 170 12 190 2.29e-31 120
MsaG004141 AT3G02940.2 52.381 105 48 2 11 115 12 114 4.40e-31 119
MsaG004141 AT1G09540.1 48.760 121 59 3 4 123 5 123 5.13e-31 120
MsaG004141 AT3G02940.1 52.381 105 48 2 11 115 12 114 1.01e-30 118
MsaG004141 AT3G02940.3 52.381 105 48 2 11 115 12 114 1.01e-30 118
MsaG004141 AT5G65230.1 52.174 115 52 3 11 124 12 124 1.37e-30 117
MsaG004141 AT1G22640.1 49.123 114 55 3 11 123 12 123 1.45e-30 116
MsaG004141 AT3G12720.1 47.107 121 61 3 10 129 21 139 1.59e-30 117
MsaG004141 AT4G38620.1 50.926 108 51 2 17 123 17 123 1.71e-30 117
MsaG004141 AT3G08500.1 50.943 106 50 2 10 115 29 132 2.06e-30 118
MsaG004141 AT1G34670.1 51.304 115 53 3 11 124 12 124 2.15e-30 118
MsaG004141 AT4G37780.1 51.887 106 48 3 11 115 12 115 2.38e-30 117
MsaG004141 AT4G09460.1 49.074 108 53 2 17 123 17 123 2.47e-30 115
MsaG004141 AT3G13890.2 47.321 112 57 2 4 115 5 114 3.17e-30 118
MsaG004141 AT5G15310.4 49.524 105 51 2 11 115 12 114 3.55e-30 115
MsaG004141 AT1G35515.1 50.000 108 52 2 17 123 17 123 3.98e-30 114
MsaG004141 AT5G56110.1 47.826 115 57 3 11 124 12 124 4.12e-30 117
MsaG004141 AT4G17785.2 50.926 108 51 2 8 115 10 115 5.30e-30 117
MsaG004141 AT4G17785.1 50.926 108 51 2 8 115 10 115 5.51e-30 117
MsaG004141 AT4G34990.1 49.074 108 53 2 17 123 17 123 6.11e-30 115
MsaG004141 AT2G31180.1 32.937 252 126 9 11 246 12 236 6.61e-30 114
MsaG004141 AT5G14750.1 50.000 104 50 2 8 111 13 114 6.66e-30 113
MsaG004141 AT3G01140.1 46.957 115 58 3 11 124 55 167 6.72e-30 117
MsaG004141 AT3G01140.2 46.957 115 58 3 11 124 12 124 6.86e-30 117
MsaG004141 AT1G63910.1 47.826 115 58 2 4 118 5 117 7.85e-30 117
MsaG004141 AT3G13540.1 45.528 123 64 3 2 123 14 134 9.81e-30 114
MsaG004141 AT2G16720.1 49.074 108 53 2 17 123 17 123 1.04e-29 114
MsaG004141 AT3G01530.1 45.299 117 59 2 4 116 13 128 1.16e-29 112
MsaG004141 AT5G15310.1 46.957 115 58 3 11 124 12 124 1.17e-29 115
MsaG004141 AT5G15310.2 46.957 115 58 3 11 124 12 124 1.22e-29 115
MsaG004141 AT3G28470.1 52.475 101 46 2 11 111 12 110 2.69e-29 114
MsaG004141 AT1G18710.1 45.217 115 60 3 11 124 12 124 2.85e-29 113
MsaG004141 AT4G01680.2 39.241 158 81 4 4 148 5 160 4.27e-29 114
MsaG004141 AT3G27920.1 49.074 108 53 2 8 115 11 116 4.87e-29 111
MsaG004141 AT1G74650.1 48.571 105 52 2 11 115 12 114 5.52e-29 114
MsaG004141 AT1G18570.1 46.491 114 58 3 11 123 13 124 5.95e-29 114
MsaG004141 AT3G49690.1 52.830 106 47 3 11 115 12 115 6.81e-29 113
MsaG004141 AT5G62470.2 44.203 138 69 4 11 147 12 142 7.75e-29 114
MsaG004141 AT1G16490.1 50.000 106 51 2 10 115 13 116 8.59e-29 112
MsaG004141 AT3G23250.1 47.619 105 53 2 11 115 12 114 9.82e-29 112
MsaG004141 AT5G57620.1 51.887 106 48 3 11 115 12 115 1.02e-28 113
MsaG004141 AT5G07690.1 48.571 105 52 2 11 115 12 114 1.13e-28 113
MsaG004141 AT1G08810.1 49.524 105 51 2 11 115 12 114 1.14e-28 112
MsaG004141 AT5G52600.1 48.515 101 50 2 11 111 12 110 1.21e-28 110
MsaG004141 AT3G27810.1 48.113 106 53 2 11 116 20 123 1.42e-28 110
MsaG004141 AT5G40330.1 49.038 104 51 2 12 115 13 114 1.55e-28 110
MsaG004141 AT5G40350.1 47.170 106 54 2 11 116 17 120 1.90e-28 109
MsaG004141 AT1G56160.1 50.000 106 51 2 10 115 13 116 1.98e-28 112
MsaG004141 AT3G47600.1 48.571 105 52 2 11 115 12 114 2.00e-28 112
MsaG004141 AT1G06180.1 48.624 109 54 2 11 119 12 118 2.01e-28 110
MsaG004141 AT1G79180.1 46.610 118 59 3 10 125 13 128 2.27e-28 111
MsaG004141 AT5G07700.1 47.619 105 53 2 11 115 12 114 3.05e-28 112
MsaG004141 AT5G07700.2 47.619 105 53 2 11 115 12 114 3.05e-28 112
MsaG004141 AT5G60890.1 33.824 204 120 7 11 201 12 213 3.25e-28 111
MsaG004141 AT5G61420.2 45.614 114 59 3 11 123 12 123 3.84e-28 112
MsaG004141 AT1G74430.1 44.348 115 61 3 11 124 12 124 4.67e-28 110
MsaG004141 AT2G47190.1 46.789 109 56 2 11 119 20 126 6.05e-28 110
MsaG004141 AT1G48000.1 47.059 102 53 1 17 118 37 137 6.88e-28 108
MsaG004141 AT3G12820.1 49.057 106 52 2 10 115 13 116 7.57e-28 108
MsaG004141 AT5G23000.1 49.533 107 51 3 10 115 11 115 7.89e-28 110
MsaG004141 AT3G28910.1 48.571 105 52 2 11 115 12 114 7.96e-28 110
MsaG004141 AT5G65790.1 51.887 106 48 3 11 115 12 115 9.02e-28 111
MsaG004141 AT5G62470.1 44.203 138 68 5 11 147 12 141 2.25e-27 110
MsaG004141 AT2G47460.1 49.505 101 49 2 11 111 12 110 2.37e-27 110
MsaG004141 AT3G13890.1 43.802 121 57 3 4 115 5 123 2.69e-27 110
MsaG004141 AT2G36890.1 43.089 123 67 3 11 132 12 132 2.98e-27 108
MsaG004141 AT3G62610.1 44.628 121 64 3 11 130 12 130 3.37e-27 109
MsaG004141 AT2G36890.2 43.089 123 67 3 11 132 53 173 4.69e-27 108
MsaG004141 AT5G35550.1 43.860 114 62 2 2 115 5 116 6.60e-27 107
MsaG004141 AT5G62320.1 46.281 121 55 4 11 123 13 131 8.19e-27 106
MsaG004141 AT5G49330.1 49.505 101 49 2 11 111 12 110 8.59e-27 108
MsaG004141 AT1G66230.1 41.912 136 76 3 11 145 12 145 9.12e-27 107
MsaG004141 AT1G25340.1 45.631 103 55 1 17 119 23 124 1.28e-26 106
MsaG004141 AT1G68320.1 43.750 112 61 2 8 119 16 125 1.80e-26 106
MsaG004141 AT5G14340.1 46.491 114 58 3 11 123 24 135 2.04e-26 105
MsaG004141 AT5G16600.1 40.602 133 76 3 11 142 12 142 4.37e-26 106
MsaG004141 AT4G13480.1 49.495 99 49 1 17 115 11 108 4.58e-26 104
MsaG004141 AT3G30210.1 47.059 102 53 1 17 118 32 132 1.01e-25 103
MsaG004141 AT3G24310.1 47.475 99 51 1 17 115 23 120 1.72e-25 103
MsaG004141 AT3G60460.1 44.954 109 57 3 11 118 11 117 1.99e-25 103
MsaG004141 AT3G48920.1 45.455 110 59 1 6 115 12 120 3.03e-25 102
MsaG004141 AT4G22680.1 45.217 115 60 3 11 124 12 124 1.72e-24 100
MsaG004141 AT5G52260.1 35.349 215 124 3 1 201 1 214 2.83e-24 100
MsaG004141 AT1G66370.1 43.636 110 59 3 9 117 6 113 5.81e-24 98.6
MsaG004141 AT3G06490.1 46.789 109 56 2 11 119 19 125 1.66e-23 99.0
MsaG004141 AT1G66380.1 43.750 112 60 3 7 117 4 113 1.80e-23 94.4
MsaG004141 AT4G25560.1 46.729 107 55 2 9 115 8 112 2.32e-23 97.8
MsaG004141 AT4G12350.1 45.714 105 55 2 11 115 12 114 2.96e-23 97.8
MsaG004141 AT1G25340.2 43.689 103 52 2 17 119 23 119 5.34e-23 96.7
MsaG004141 AT1G79180.2 37.086 151 58 4 10 125 13 161 5.63e-23 97.8
MsaG004141 AT1G25340.3 43.689 103 52 2 17 119 23 119 7.61e-23 97.1
MsaG004141 AT5G59780.3 42.593 108 61 1 17 124 13 119 1.27e-22 94.7
MsaG004141 AT5G26660.2 48.837 86 42 2 39 123 8 92 1.36e-22 96.7
MsaG004141 AT1G56650.1 39.062 128 67 4 7 125 4 129 1.52e-22 94.7
MsaG004141 AT1G66390.1 42.857 112 61 3 7 117 4 113 1.66e-22 94.7
MsaG004141 AT3G53200.1 45.794 107 56 2 11 117 9 113 1.74e-22 94.4
MsaG004141 AT3G46130.1 44.444 99 54 1 17 115 14 111 4.06e-22 94.0
MsaG004141 AT5G49620.1 44.660 103 56 1 17 119 31 132 5.85e-22 94.4
MsaG004141 AT3G50060.1 43.396 106 58 2 17 122 9 112 1.59e-21 93.2
MsaG004141 AT4G18770.1 40.146 137 73 5 9 139 208 341 8.55e-21 92.8
MsaG004141 AT5G49620.2 39.167 120 52 2 17 119 31 146 1.54e-20 90.9
MsaG004141 AT4G37260.1 44.860 107 56 3 17 122 16 120 3.48e-20 89.7
MsaG004141 AT5G40350.2 50.000 74 36 1 43 116 3 75 8.74e-20 85.5
MsaG004141 AT5G67300.1 47.000 100 50 3 17 115 9 106 1.50e-19 87.8
MsaG004141 AT3G27810.2 51.389 72 34 1 45 116 4 74 1.87e-19 84.7
MsaG004141 AT3G27785.1 41.748 103 57 3 17 118 192 292 1.96e-19 89.0
MsaG004141 AT2G23290.1 45.000 100 52 3 17 115 16 113 4.20e-19 86.7
MsaG004141 AT5G58850.1 43.119 109 59 3 7 115 99 204 5.29e-19 87.4
MsaG004141 AT5G40360.1 40.404 99 57 2 17 115 161 257 2.01e-18 85.1
MsaG004141 AT2G25230.1 37.594 133 74 5 5 130 13 143 2.08e-18 83.2
MsaG004141 AT1G17950.1 40.367 109 61 3 17 123 8 114 2.21e-18 83.6
MsaG004141 AT3G12820.2 55.224 67 29 1 49 115 3 68 3.85e-18 81.6
MsaG004141 AT3G53200.2 52.055 73 34 1 45 117 9 80 4.08e-18 81.6
MsaG004141 AT5G11050.1 33.871 186 107 6 9 181 101 283 4.87e-18 84.7
MsaG004141 AT2G39880.1 39.695 131 76 3 17 146 53 181 1.42e-17 82.8
MsaG004141 AT5G35550.2 52.113 71 33 1 45 115 50 119 1.97e-17 80.9
MsaG004141 AT4G33450.1 37.736 106 64 2 17 122 22 125 5.44e-17 79.7
MsaG004141 AT3G09370.2 36.054 147 90 4 6 151 128 271 1.22e-16 80.9
MsaG004141 AT3G09370.2 36.275 102 62 2 9 110 80 178 1.13e-13 72.0
MsaG004141 AT5G14750.3 43.373 83 41 2 38 115 3 84 1.45e-16 76.6
MsaG004141 AT3G09370.3 36.054 147 90 4 6 151 136 279 1.46e-16 80.5
MsaG004141 AT3G09370.3 36.275 102 62 2 9 110 88 186 1.55e-13 71.6
MsaG004141 AT3G55730.1 40.566 106 61 2 10 115 52 155 1.49e-16 80.1
MsaG004141 AT3G09370.1 36.054 147 90 4 6 151 123 266 1.58e-16 80.5
MsaG004141 AT3G09370.1 36.275 102 62 2 9 110 75 173 1.26e-13 71.6
MsaG004141 AT3G46130.3 48.611 72 36 1 44 115 9 79 2.43e-16 77.4
MsaG004141 AT5G17800.1 36.296 135 76 4 17 143 96 228 2.78e-16 78.6
MsaG004141 AT1G26780.1 38.095 105 62 3 17 120 101 203 4.53e-16 77.4
MsaG004141 AT5G59780.2 45.000 80 43 1 45 124 20 98 5.56e-16 75.9
MsaG004141 AT1G26780.2 38.462 104 61 3 17 119 101 202 6.07e-16 78.2
MsaG004141 AT1G69560.1 40.000 100 55 3 17 113 110 207 6.51e-16 77.8
MsaG004141 AT3G46130.4 49.296 71 35 1 45 115 20 89 6.63e-16 76.3
MsaG004141 AT1G69560.2 40.000 100 55 3 17 113 126 223 6.87e-16 77.8
MsaG004141 AT2G37630.1 40.000 110 63 2 11 118 1 109 6.90e-16 77.8
MsaG004141 AT4G00540.2 37.410 139 76 6 6 140 96 227 6.95e-16 78.2
MsaG004141 AT3G47600.2 47.887 71 36 1 45 115 39 108 6.98e-16 77.4
MsaG004141 AT4G00540.1 37.410 139 76 6 6 140 94 225 7.78e-16 78.2
MsaG004141 AT3G09230.1 37.000 100 61 2 17 116 58 155 7.85e-16 78.2
MsaG004141 AT5G02320.3 38.182 110 65 3 6 115 60 166 1.57e-15 77.4
MsaG004141 AT5G02320.3 35.294 102 63 2 9 110 12 110 2.49e-13 70.9
MsaG004141 AT5G02320.1 38.182 110 65 3 6 115 120 226 1.68e-15 77.4
MsaG004141 AT5G02320.1 35.294 102 63 2 9 110 72 170 2.66e-13 70.9
MsaG004141 AT5G02320.2 38.182 110 65 3 6 115 120 226 1.68e-15 77.4
MsaG004141 AT5G02320.2 35.294 102 63 2 9 110 72 170 2.66e-13 70.9
MsaG004141 AT4G32730.1 38.182 110 65 3 6 115 80 186 3.49e-15 76.6
MsaG004141 AT4G32730.1 35.514 107 57 3 9 110 31 130 7.20e-13 69.7
MsaG004141 AT1G73410.2 39.252 107 63 2 17 123 9 113 3.61e-15 73.6
MsaG004141 AT1G73410.1 39.252 107 63 2 17 123 9 113 3.62e-15 74.3
MsaG004141 AT4G32730.5 38.182 110 65 3 6 115 80 186 3.62e-15 77.0
MsaG004141 AT4G32730.5 35.514 107 57 3 9 110 31 130 7.86e-13 69.7
MsaG004141 AT4G32730.4 38.182 110 65 3 6 115 80 186 3.62e-15 77.0
MsaG004141 AT4G32730.4 35.514 107 57 3 9 110 31 130 7.86e-13 69.7
MsaG004141 AT4G32730.3 38.182 110 65 3 6 115 80 186 3.62e-15 77.0
MsaG004141 AT4G32730.3 35.514 107 57 3 9 110 31 130 7.86e-13 69.7
MsaG004141 AT4G32730.2 38.182 110 65 3 6 115 80 186 3.62e-15 77.0
MsaG004141 AT4G32730.2 35.514 107 57 3 9 110 31 130 7.86e-13 69.7
MsaG004141 AT3G29020.1 39.423 104 58 3 17 117 68 169 1.41e-14 72.4
MsaG004141 AT1G66380.3 46.667 75 38 2 44 117 7 80 2.05e-14 68.9
MsaG004141 AT3G29020.2 39.423 104 58 3 17 117 70 171 2.56e-14 72.8
MsaG004141 AT5G11510.5 34.545 110 69 3 6 115 74 180 3.81e-14 73.6
MsaG004141 AT5G11510.5 36.275 102 63 2 9 110 25 124 2.54e-13 71.2
MsaG004141 AT5G11510.3 34.545 110 69 3 6 115 74 180 3.84e-14 73.9
MsaG004141 AT5G11510.3 36.275 102 63 2 9 110 25 124 2.32e-13 71.2
MsaG004141 AT5G11510.1 34.545 110 69 3 6 115 74 180 3.84e-14 73.9
MsaG004141 AT5G11510.1 36.275 102 63 2 9 110 25 124 2.32e-13 71.2
MsaG004141 AT5G11510.4 34.545 110 69 3 6 115 74 180 3.84e-14 73.9
MsaG004141 AT5G11510.4 36.275 102 63 2 9 110 25 124 2.32e-13 71.2
MsaG004141 AT5G11510.2 34.545 110 69 3 6 115 74 180 3.86e-14 73.6
MsaG004141 AT5G11510.2 36.275 102 63 2 9 110 25 124 2.62e-13 71.2
MsaG004141 AT1G66380.2 44.118 68 37 1 7 74 4 70 4.26e-14 68.2
MsaG004141 AT1G14350.2 33.628 113 73 2 7 119 18 128 8.04e-13 69.3
MsaG004141 AT1G14350.1 33.628 113 73 2 7 119 18 128 8.04e-13 69.3
MsaG004141 AT5G40430.1 36.283 113 65 4 7 115 43 152 1.07e-12 67.4
MsaG004141 AT1G22640.3 51.515 66 30 2 59 123 2 66 1.14e-12 66.2
MsaG004141 AT5G39700.1 38.835 103 61 2 9 111 51 151 1.99e-12 65.5
MsaG004141 AT2G02820.2 32.743 113 74 2 7 119 23 133 2.79e-12 67.8
MsaG004141 AT2G02820.1 32.743 113 74 2 7 119 23 133 2.82e-12 67.8
MsaG004141 AT2G02820.3 34.951 103 65 2 17 119 33 133 5.70e-12 66.2
MsaG004141 AT3G18100.3 37.755 98 58 3 12 109 497 591 9.00e-12 66.6
MsaG004141 AT3G18100.1 37.755 98 58 3 12 109 545 639 9.78e-12 66.2
MsaG004141 AT3G18100.4 37.755 98 58 3 12 109 384 478 9.91e-12 66.2
MsaG004141 AT3G18100.2 37.755 98 58 3 12 109 332 426 1.09e-11 66.2
MsaG004141 AT3G23250.2 47.368 57 29 1 59 115 2 57 5.78e-11 62.0

Find 70 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTTTGAAAACTGCTTATT+TGG 0.060651 1:-66104778 None:intergenic
ACATAATGAATCCGGAATTT+TGG 0.151632 1:+66105084 MsaT004141.1:CDS
AAGATACCAGAAGTTAAATT+TGG 0.198102 1:+66104721 MsaT004141.1:CDS
TGATACCTCCTTCCAATTTC+CGG 0.211449 1:-66104178 None:intergenic
CATCGTTGGTTACTAATAAA+AGG 0.216843 1:+66104085 MsaT004141.1:CDS
GGAACCCTTATACGGATATT+TGG 0.228598 1:+66105331 MsaT004141.1:CDS
CTACTTCAACTTTGATTGAT+AGG 0.246409 1:+66104860 MsaT004141.1:CDS
TCAAACCAAATATCCGTATA+AGG 0.249713 1:-66105336 None:intergenic
AAAGTTCTTGATGTCATTAT+CGG 0.301665 1:-66104569 None:intergenic
CCTTTGGAGAACGATGAAAA+AGG 0.312790 1:+66105017 MsaT004141.1:CDS
ATAATGACATCAAGAACTTT+TGG 0.313765 1:+66104572 MsaT004141.1:CDS
TTACAGTTATGTTCTAAGTT+TGG 0.321381 1:+66104312 MsaT004141.1:CDS
CATTGTCATGCAAGTGTCTA+AGG 0.322693 1:-66105183 None:intergenic
ACCAGTTCCATTATGTTGTC+AGG 0.338387 1:-66104640 None:intergenic
TGGTTTGAGGAACCCTTATA+CGG 0.340488 1:+66105323 MsaT004141.1:CDS
AACGCGTCATTCCAAAATTC+CGG 0.348622 1:-66105095 None:intergenic
ATGTCATTATCGGTTCTTCC+AGG 0.362890 1:-66104559 None:intergenic
ACTTTGAAAACTGCTTATTT+GGG 0.369164 1:-66104777 None:intergenic
TGATTTCCAAATTTAACTTC+TGG 0.372019 1:-66104727 None:intergenic
CTGGAAGAAGGCAATTGCTT+TGG 0.394386 1:+66105271 MsaT004141.1:CDS
ACCCTTCCCTGACAACATAA+TGG 0.401390 1:+66104633 MsaT004141.1:CDS
CTAAGTTTGGTGAGTTCAAA+TGG 0.403243 1:+66104325 MsaT004141.1:CDS
GAAGAAGGCAATTGCTTTGG+AGG 0.406913 1:+66105274 MsaT004141.1:CDS
TTGATGAAAGCCAGGTCATT+TGG 0.408351 1:+66105303 MsaT004141.1:CDS
CAAACCAAATATCCGTATAA+GGG 0.421526 1:-66105335 None:intergenic
TCTTCTTCTTCTTTACTAAA+CGG 0.425038 1:-66104282 None:intergenic
AAGGCATCATTAAAATCATA+TGG 0.427844 1:-66105164 None:intergenic
GCCTCCACTCCCACCACCTA+TGG 0.431643 1:+66105217 MsaT004141.1:CDS
CCCTGACAACATAATGGAAC+TGG 0.441688 1:+66104639 MsaT004141.1:CDS
AAGCCAGGTCATTTGGTTTG+AGG 0.452339 1:+66105310 MsaT004141.1:CDS
GGAAGAAGGGAAGAAGCCTT+TGG 0.456662 1:+66105001 MsaT004141.1:CDS
GTCTCCATAGGTGGTGGGAG+TGG 0.457379 1:-66105221 None:intergenic
TTCATCGATTTCAGGGAAGA+AGG 0.458892 1:+66104987 MsaT004141.1:intron
GGTTGAAGAAAGGAACATTA+TGG 0.458991 1:+66104106 MsaT004141.1:CDS
AACGGACCCTTCTTTACATC+AGG 0.460974 1:-66104264 None:intergenic
AGATGTCAGAGATAAATAAC+TGG 0.463955 1:+66105252 MsaT004141.1:CDS
AAATATGTTCTTCAATAATG+TGG 0.466264 1:+66104813 MsaT004141.1:CDS
AACATAATGGAACTGGTTGA+TGG 0.486232 1:+66104646 MsaT004141.1:CDS
TCTACGACCTGATGTAAAGA+AGG 0.489579 1:+66104257 MsaT004141.1:CDS
TCCATTATGTTGTCAGGGAA+GGG 0.491147 1:-66104634 None:intergenic
TTCCATTATGTTGTCAGGGA+AGG 0.494749 1:-66104635 None:intergenic
CACTTGCATGACAATGCAAT+CGG 0.503317 1:+66105190 MsaT004141.1:CDS
GCATGACGACATAATGAATC+CGG 0.506299 1:+66105076 MsaT004141.1:CDS
AAGGCAATTGCTTTGGAGGA+AGG 0.515313 1:+66105278 MsaT004141.1:CDS
GATGGTTTGAAGAGTAGTAA+TGG 0.516640 1:+66104664 MsaT004141.1:CDS
TCCATAGGTGGTGGGAGTGG+AGG 0.516845 1:-66105218 None:intergenic
GATTCATTATGTCGTCATGC+AGG 0.522460 1:-66105073 None:intergenic
TAACATCATGACTTCATCGT+TGG 0.529999 1:+66104071 None:intergenic
ACTAATAAAAGGTTGAAGAA+AGG 0.530614 1:+66104096 MsaT004141.1:CDS
AATATGTTCTTCAATAATGT+GGG 0.531232 1:+66104814 MsaT004141.1:CDS
GGAAGGTGTTGATGAAAGCC+AGG 0.532700 1:+66105295 MsaT004141.1:CDS
AGAGATAAATAACTGGAAGA+AGG 0.539212 1:+66105259 MsaT004141.1:CDS
GCTTCAACATCGTTCTGCAA+AGG 0.544551 1:-66105047 None:intergenic
TGTTGTGTCTCCATAGGTGG+TGG 0.552970 1:-66105227 None:intergenic
CCAGTTCCATTATGTTGTCA+GGG 0.557866 1:-66104639 None:intergenic
TCATCGATTTCAGGGAAGAA+GGG 0.571612 1:+66104988 MsaT004141.1:intron
TGAGTTCAAATGGTCTAAGA+TGG 0.574582 1:+66104335 MsaT004141.1:CDS
ACATGGAACCGGAAATTGGA+AGG 0.586011 1:+66104170 MsaT004141.1:CDS
GTTCAACACATTAGTCAATG+AGG 0.597425 1:+66105115 MsaT004141.1:CDS
ATCTGATGTTGTGTCTCCAT+AGG 0.603150 1:-66105233 None:intergenic
ATGGTCTAAGATGGCTCTCG+AGG 0.607145 1:+66104344 MsaT004141.1:CDS
TGATGTTGTGTCTCCATAGG+TGG 0.616221 1:-66105230 None:intergenic
GTTGTGTCTCCATAGGTGGT+GGG 0.620759 1:-66105226 None:intergenic
GTTCCTCAAACCAAATGACC+TGG 0.626263 1:-66105313 None:intergenic
CTACGACCTGATGTAAAGAA+GGG 0.647996 1:+66104258 MsaT004141.1:CDS
GAAGGAGGTATCAAAGAACA+CGG 0.666684 1:+66104188 MsaT004141.1:CDS
AAAAGAAAACATGAAAGACA+TGG 0.669709 1:+66104604 MsaT004141.1:CDS
AACACGGGACTCGCACACTG+TGG 0.681782 1:+66104204 MsaT004141.1:CDS
TGGAACCGGAAATTGGAAGG+AGG 0.696666 1:+66104173 MsaT004141.1:CDS
AAGGAGGTATCAAAGAACAC+GGG 0.739276 1:+66104189 MsaT004141.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 66104078 66105358 66104078 ID=MsaG004141
Chr1 mRNA 66104078 66105358 66104078 ID=MsaT004141.1;Parent=MsaG004141
Chr1 exon 66104078 66104365 66104078 ID=MsaT004141.1.exon1;Parent=MsaT004141.1
Chr1 CDS 66104078 66104365 66104078 ID=cds.MsaT004141.1;Parent=MsaT004141.1
Chr1 exon 66104556 66104881 66104556 ID=MsaT004141.1.exon2;Parent=MsaT004141.1
Chr1 CDS 66104556 66104881 66104556 ID=cds.MsaT004141.1;Parent=MsaT004141.1
Chr1 exon 66105001 66105358 66105001 ID=MsaT004141.1.exon3;Parent=MsaT004141.1
Chr1 CDS 66105001 66105358 66105001 ID=cds.MsaT004141.1;Parent=MsaT004141.1
Gene Sequence

>MsaT004141.1

ATGACTTCATCGTTGGTTACTAATAAAAGGTTGAAGAAAGGAACATTATGGTCAGAAGAAGAAGATGAAATATTAAAAGCATATGTTGAAAAACATGGAACCGGAAATTGGAAGGAGGTATCAAAGAACACGGGACTCGCACACTGTGGAAATAGTTGTCGTTTTAGATGGTATAATACTCTACGACCTGATGTAAAGAAGGGTCCGTTTAGTAAAGAAGAAGAAGAAAAATTCTTACAGTTATGTTCTAAGTTTGGTGAGTTCAAATGGTCTAAGATGGCTCTCGAGATGCCTGGAAGAACCGATAATGACATCAAGAACTTTTGGAATGCAAGAAAAAGAAAACATGAAAGACATGGCTTGTCACCCTTCCCTGACAACATAATGGAACTGGTTGATGGTTTGAAGAGTAGTAATGGAAAAAGAATAAGGAATTCACAAGAAAACAAATTTAAGATACCAGAAGTTAAATTTGGAAATCAAATTCTGCATACAAACTTGTCTGATCTCCCAAATAAGCAGTTTTCAAAGTTGATTGATGATTCAAATATGTTCTTCAATAATGTGGGAAGTACTTCTACAAGCAATCATACTACTTCAACTTTGATTGATAGGGAAGAAGGGAAGAAGCCTTTGGAGAACGATGAAAAAGGGAAGAAGCCTTTGCAGAACGATGTTGAAGCAAACCTGCATGACGACATAATGAATCCGGAATTTTGGAATGACGCGTTCAACACATTAGTCAATGAGGTTTACAATGACTTGCATGACAAGCTTCCATATGATTTTAATGATGCCTTAGACACTTGCATGACAATGCAATCGGATCTGCCTCCACTCCCACCACCTATGGAGACACAACATCAGATGTCAGAGATAAATAACTGGAAGAAGGCAATTGCTTTGGAGGAAGGTGTTGATGAAAGCCAGGTCATTTGGTTTGAGGAACCCTTATACGGATATTTGGTTTGA
Protein sequence

>MsaT004141.1

MTSSLVTNKRLKKGTLWSEEEDEILKAYVEKHGTGNWKEVSKNTGLAHCGNSCRFRWYNTLRPDVKKGPFSKEEEEKFLQLCSKFGEFKWSKMALEMPGRTDNDIKNFWNARKRKHERHGLSPFPDNIMELVDGLKSSNGKRIRNSQENKFKIPEVKFGNQILHTNLSDLPNKQFSKLIDDSNMFFNNVGSTSTSNHTTSTLIDREEGKKPLENDEKGKKPLQNDVEANLHDDIMNPEFWNDAFNTLVNEVYNDLHDKLPYDFNDALDTCMTMQSDLPPLPPPMETQHQMSEINNWKKAIALEEGVDESQVIWFEEPLYGYLV*