AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG004142

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG004142 MtrunA17_Chr5g0441131 71.282 195 36 4 12 205 10 185 7.15e-81 243
MsaG004142 MtrunA17_Chr5g0440761 57.025 242 76 8 12 236 13 243 2.49e-77 237
MsaG004142 MtrunA17_Chr5g0441141 53.114 273 93 10 12 259 13 275 5.21e-76 234
MsaG004142 MtrunA17_Chr5g0440781 62.887 194 55 6 12 205 13 189 2.36e-72 222
MsaG004142 MtrunA17_Chr1g0193901 91.753 97 8 0 1 97 1 97 3.05e-48 157
MsaG004142 MtrunA17_Chr1g0193891 91.753 97 8 0 1 97 1 97 3.05e-48 157
MsaG004142 MtrunA17_Chr1g0193871 91.753 97 8 0 1 97 1 97 3.05e-48 157
MsaG004142 MtrunA17_Chr1g0193881 91.753 97 8 0 1 97 1 97 3.05e-48 157
MsaG004142 MtrunA17_Chr1g0192411 46.842 190 92 6 10 193 11 197 7.00e-40 144
MsaG004142 MtrunA17_Chr8g0354661 40.500 200 103 7 11 197 37 233 3.72e-39 145
MsaG004142 MtrunA17_Chr1g0154031 46.243 173 83 6 11 179 76 242 4.05e-38 140
MsaG004142 MtrunA17_Chr3g0099131 56.897 116 48 2 11 126 41 154 1.14e-37 140
MsaG004142 MtrunA17_Chr5g0425591 74.118 85 21 1 12 96 10 93 1.37e-37 129
MsaG004142 MtrunA17_Chr4g0048511 53.846 117 51 3 8 123 10 124 1.47e-35 132
MsaG004142 MtrunA17_Chr2g0281071 54.701 117 50 3 8 123 10 124 1.68e-35 131
MsaG004142 MtrunA17_Chr3g0080861 48.819 127 62 3 11 136 37 161 1.70e-35 134
MsaG004142 MtrunA17_Chr2g0322521 55.932 118 50 2 11 128 29 144 1.71e-35 132
MsaG004142 MtrunA17_Chr2g0323411 54.386 114 49 3 11 123 12 123 6.29e-35 129
MsaG004142 MtrunA17_Chr7g0270891 43.750 160 85 4 4 162 5 160 1.69e-34 129
MsaG004142 MtrunA17_Chr4g0032401 54.128 109 48 2 7 115 13 119 9.15e-34 126
MsaG004142 MtrunA17_Chr1g0193371 50.413 121 57 3 4 123 5 123 1.77e-33 126
MsaG004142 MtrunA17_Chr5g0410961 56.190 105 44 2 11 115 12 114 2.48e-33 125
MsaG004142 MtrunA17_Chr1g0193801 41.875 160 84 5 4 162 5 156 4.29e-33 125
MsaG004142 MtrunA17_Chr1g0187761 53.333 105 47 2 11 115 12 114 5.56e-33 122
MsaG004142 MtrunA17_Chr1g0151941 34.842 221 118 8 9 214 10 219 6.13e-33 122
MsaG004142 MtrunA17_Chr5g0395281 52.174 115 52 3 11 124 12 124 1.02e-32 123
MsaG004142 MtrunA17_Chr7g0274581 44.275 131 70 3 11 140 12 140 2.29e-32 119
MsaG004142 MtrunA17_Chr3g0115821 50.435 115 54 3 11 124 12 124 2.68e-32 122
MsaG004142 MtrunA17_Chr2g0328771 53.333 105 47 2 11 115 20 122 3.28e-32 122
MsaG004142 MtrunA17_Chr3g0117091 50.000 116 55 3 9 123 10 123 4.65e-32 122
MsaG004142 MtrunA17_Chr4g0039971 51.304 115 53 3 11 124 13 125 4.74e-32 122
MsaG004142 MtrunA17_Chr7g0271241 53.271 107 48 2 4 110 5 109 5.05e-32 122
MsaG004142 MtrunA17_Chr4g0068061 41.566 166 84 5 11 165 12 175 6.69e-32 121
MsaG004142 MtrunA17_Chr1g0211161 47.934 121 60 3 4 123 6 124 7.58e-32 119
MsaG004142 MtrunA17_Chr6g0453751 63.265 98 27 2 7 96 16 112 8.20e-32 115
MsaG004142 MtrunA17_Chr1g0203411 46.847 111 57 2 11 121 12 120 1.40e-31 119
MsaG004142 MtrunA17_Chr3g0088461 50.000 110 53 2 6 115 17 124 1.42e-31 120
MsaG004142 MtrunA17_Chr1g0167691 50.467 107 51 2 9 115 10 114 1.57e-31 118
MsaG004142 MtrunA17_Chr3g0103281 41.892 148 78 4 11 152 12 157 1.94e-31 120
MsaG004142 MtrunA17_Chr4g0058631 47.107 121 61 3 4 123 5 123 4.03e-31 120
MsaG004142 MtrunA17_Chr8g0342521 47.934 121 60 3 4 123 5 123 9.36e-31 119
MsaG004142 MtrunA17_Chr8g0385321 50.926 108 51 2 17 123 17 123 1.12e-30 117
MsaG004142 MtrunA17_Chr4g0022931 46.789 109 56 2 11 119 13 119 1.12e-30 117
MsaG004142 MtrunA17_Chr1g0167661 50.467 107 51 2 9 115 10 114 1.18e-30 116
MsaG004142 MtrunA17_Chr2g0323351 50.476 105 50 2 11 115 12 114 1.46e-30 115
MsaG004142 MtrunA17_Chr8g0387421 46.957 115 59 2 4 118 5 117 2.69e-30 117
MsaG004142 MtrunA17_Chr4g0042671 47.368 114 57 3 11 123 12 123 2.97e-30 118
MsaG004142 MtrunA17_Chr2g0330041 46.281 121 62 3 4 123 5 123 3.36e-30 118
MsaG004142 MtrunA17_Chr1g0152011 52.830 106 47 3 11 115 12 115 3.67e-30 117
MsaG004142 MtrunA17_Chr5g0397231 48.148 108 54 2 4 111 5 110 4.21e-30 117
MsaG004142 MtrunA17_Chr2g0309911 44.355 124 66 3 1 123 1 122 4.28e-30 116
MsaG004142 MtrunA17_Chr4g0022901 48.571 105 52 2 11 115 13 115 4.52e-30 115
MsaG004142 MtrunA17_Chr8g0342541 47.321 112 57 2 4 115 5 114 4.63e-30 117
MsaG004142 MtrunA17_Chr4g0037141 49.074 108 53 2 17 123 17 123 4.89e-30 115
MsaG004142 MtrunA17_Chr1g0209661 32.780 241 118 9 11 225 27 249 5.27e-30 116
MsaG004142 MtrunA17_Chr6g0452271 43.262 141 76 4 11 149 12 150 5.78e-30 116
MsaG004142 MtrunA17_Chr5g0400821 51.887 106 48 3 11 115 12 115 6.99e-30 115
MsaG004142 MtrunA17_Chr4g0022911 41.304 138 78 3 11 147 13 148 7.16e-30 115
MsaG004142 MtrunA17_Chr7g0228231 49.057 106 52 2 11 116 14 117 7.20e-30 113
MsaG004142 MtrunA17_Chr7g0217741 46.087 115 59 3 11 124 12 124 7.36e-30 115
MsaG004142 MtrunA17_Chr3g0131121 49.074 108 53 2 17 123 17 123 9.94e-30 115
MsaG004142 MtrunA17_Chr6g0450101 42.308 130 73 2 2 131 5 132 1.03e-29 112
MsaG004142 MtrunA17_Chr4g0022881 50.000 104 50 2 12 115 13 114 1.10e-29 113
MsaG004142 MtrunA17_Chr5g0435101 38.194 144 86 3 11 153 11 152 1.19e-29 112
MsaG004142 MtrunA17_Chr1g0194301 47.706 109 55 2 11 119 33 139 1.54e-29 114
MsaG004142 MtrunA17_Chr2g0327351 53.922 102 44 3 11 111 12 111 2.13e-29 114
MsaG004142 MtrunA17_Chr4g0054391 53.465 101 44 3 11 110 12 110 2.83e-29 113
MsaG004142 MtrunA17_Chr4g0028311 51.887 106 48 3 11 115 12 115 3.18e-29 114
MsaG004142 MtrunA17_Chr6g0453471 45.217 115 60 3 11 124 12 124 4.31e-29 114
MsaG004142 MtrunA17_Chr7g0254411 49.524 105 51 2 11 115 12 114 5.81e-29 114
MsaG004142 MtrunA17_Chr6g0453211 50.495 101 48 2 11 111 12 110 7.10e-29 113
MsaG004142 MtrunA17_Chr8g0349261 48.598 107 52 3 11 116 13 117 7.58e-29 112
MsaG004142 MtrunA17_Chr3g0135311 42.759 145 73 5 11 149 12 152 8.36e-29 113
MsaG004142 MtrunA17_Chr7g0264641 50.943 106 49 3 11 115 12 115 9.90e-29 111
MsaG004142 MtrunA17_Chr4g0060721 50.000 106 50 3 11 115 13 116 1.13e-28 112
MsaG004142 MtrunA17_Chr8g0343831 49.515 103 50 2 9 111 6 106 1.46e-28 110
MsaG004142 MtrunA17_Chr1g0186061 46.429 112 58 2 4 115 13 122 2.24e-28 110
MsaG004142 MtrunA17_Chr1g0203441 49.541 109 53 2 7 115 9 115 2.78e-28 110
MsaG004142 MtrunA17_Chr3g0092401 48.571 105 52 2 11 115 13 115 3.53e-28 111
MsaG004142 MtrunA17_Chr4g0070641 48.421 95 48 1 17 111 17 110 3.80e-28 107
MsaG004142 MtrunA17_Chr6g0470971 39.490 157 83 4 6 155 9 160 3.90e-28 110
MsaG004142 MtrunA17_Chr4g0055981 44.248 113 61 2 7 119 51 161 4.08e-28 108
MsaG004142 MtrunA17_Chr1g0194951 49.505 101 49 2 11 111 12 110 4.22e-28 112
MsaG004142 MtrunA17_Chr7g0261281 47.619 105 53 2 11 115 12 114 5.06e-28 110
MsaG004142 MtrunA17_Chr8g0346561 49.474 95 47 1 17 111 17 110 5.72e-28 110
MsaG004142 MtrunA17_Chr7g0217221 47.619 105 53 2 11 115 12 114 5.85e-28 109
MsaG004142 MtrunA17_Chr4g0013361 40.000 175 90 7 11 180 10 174 9.52e-28 109
MsaG004142 MtrunA17_Chr7g0275911 46.316 95 50 1 17 111 17 110 1.00e-27 108
MsaG004142 MtrunA17_Chr4g0072751 50.980 102 47 3 11 111 12 111 1.09e-27 110
MsaG004142 MtrunA17_Chr3g0121241 45.614 114 59 3 11 123 42 153 1.13e-27 109
MsaG004142 MtrunA17_Chr4g0070611 33.333 258 147 10 11 255 12 257 1.32e-27 109
MsaG004142 MtrunA17_Chr6g0487491 43.307 127 63 3 10 128 11 136 1.43e-27 108
MsaG004142 MtrunA17_Chr2g0311221 51.961 102 47 2 10 111 13 112 6.32e-27 108
MsaG004142 MtrunA17_Chr4g0022891 47.525 101 51 2 11 111 12 110 8.32e-27 105
MsaG004142 MtrunA17_Chr1g0168661 47.475 99 51 1 17 115 26 123 1.25e-26 105
MsaG004142 MtrunA17_Chr1g0180391 40.876 137 79 2 11 147 19 153 1.36e-26 105
MsaG004142 MtrunA17_Chr3g0110351 44.167 120 64 3 11 129 12 129 1.70e-26 106
MsaG004142 MtrunA17_Chr8g0342481 45.133 113 59 3 4 115 5 115 1.82e-26 108
MsaG004142 MtrunA17_Chr5g0434571 46.087 115 59 3 11 124 48 160 2.07e-26 107
MsaG004142 MtrunA17_Chr7g0228891 46.087 115 59 3 11 124 12 124 2.15e-26 105
MsaG004142 MtrunA17_Chr1g0194291 43.119 109 60 2 11 119 21 127 3.79e-26 104
MsaG004142 MtrunA17_Chr4g0044421 46.602 103 53 2 13 115 14 114 5.92e-26 102
MsaG004142 MtrunA17_Chr7g0240821 45.918 98 52 1 14 111 3 99 8.33e-26 102
MsaG004142 MtrunA17_Chr7g0269831 52.475 101 46 2 11 111 12 110 9.90e-26 105
MsaG004142 MtrunA17_Chr4g0057031 44.348 115 61 3 11 124 12 124 1.07e-25 103
MsaG004142 MtrunA17_Chr3g0099141 58.333 84 33 2 11 94 40 121 1.68e-25 99.4
MsaG004142 MtrunA17_Chr5g0417821 45.614 114 59 3 11 123 7 118 3.35e-25 102
MsaG004142 MtrunA17_Chr8g0334881 45.872 109 56 3 11 118 10 116 1.05e-24 102
MsaG004142 MtrunA17_Chr2g0293911 44.954 109 58 2 11 119 24 130 1.80e-24 101
MsaG004142 MtrunA17_Chr5g0434931 41.905 105 59 2 11 115 35 137 9.26e-24 98.6
MsaG004142 MtrunA17_Chr4g0068921 44.762 105 56 2 11 115 24 126 2.86e-23 95.1
MsaG004142 MtrunA17_Chr5g0434841 44.762 105 56 2 11 115 20 122 2.89e-23 97.8
MsaG004142 MtrunA17_Chr5g0434911 41.121 107 61 2 9 115 19 123 9.76e-23 95.5
MsaG004142 MtrunA17_Chr8g0360111 42.574 101 56 2 11 111 25 123 1.10e-22 95.1
MsaG004142 MtrunA17_Chr5g0434831 42.857 105 58 2 11 115 7 109 2.04e-22 92.8
MsaG004142 MtrunA17_Chr2g0327821 41.818 110 62 2 6 115 1 108 3.43e-22 93.2
MsaG004142 MtrunA17_Chr7g0247131 49.383 81 39 2 44 123 10 89 4.62e-22 93.6
MsaG004142 MtrunA17_Chr4g0030881 38.760 129 67 4 5 123 1 127 1.15e-21 92.4
MsaG004142 MtrunA17_Chr6g0454921 46.809 94 48 2 17 110 18 109 1.71e-21 90.9
MsaG004142 MtrunA17_Chr7g0220341 41.748 103 56 3 11 111 25 125 2.08e-21 92.0
MsaG004142 MtrunA17_Chr3g0133601 41.509 106 60 2 17 122 40 143 2.44e-21 90.5
MsaG004142 MtrunA17_Chr5g0401731 47.000 100 50 3 17 115 18 115 2.77e-21 92.4
MsaG004142 MtrunA17_Chr7g0228991 39.252 107 63 2 9 115 27 131 3.91e-21 91.3
MsaG004142 MtrunA17_Chr2g0323321 46.512 86 45 1 1 86 1 85 1.16e-20 85.5
MsaG004142 MtrunA17_Chr4g0058991 28.216 241 147 7 17 235 212 448 2.89e-20 90.9
MsaG004142 MtrunA17_Chr4g0072451 46.667 105 44 4 65 159 11 113 4.99e-20 84.7
MsaG004142 MtrunA17_Chr5g0395221 51.316 76 36 1 11 86 12 86 5.41e-20 83.2
MsaG004142 MtrunA17_Chr4g0042611 48.052 77 39 1 10 86 11 86 5.47e-20 83.2
MsaG004142 MtrunA17_Chr8g0342511 50.633 79 39 0 8 86 8 86 6.15e-20 83.2
MsaG004142 MtrunA17_Chr3g0117511 39.130 115 66 3 17 129 186 298 7.26e-20 89.7
MsaG004142 MtrunA17_Chr5g0429661 41.284 109 61 3 7 115 116 221 1.40e-19 88.2
MsaG004142 MtrunA17_Chr4g0008551 40.952 105 60 2 17 121 41 143 1.75e-19 87.8
MsaG004142 MtrunA17_Chr6g0460661 38.679 106 63 2 17 122 19 122 4.53e-19 82.8
MsaG004142 MtrunA17_Chr8g0342531 48.718 78 39 1 4 81 5 81 3.63e-18 80.5
MsaG004142 MtrunA17_Chr6g0480581 40.196 102 56 3 17 115 7 106 5.88e-18 81.6
MsaG004142 MtrunA17_Chr4g0053431 44.000 100 53 3 17 115 8 105 6.11e-18 82.4
MsaG004142 MtrunA17_Chr2g0294811 48.684 76 38 1 11 86 12 86 1.30e-17 77.8
MsaG004142 MtrunA17_Chr7g0228401 36.585 123 52 3 16 114 257 377 2.64e-17 82.4
MsaG004142 MtrunA17_Chr5g0437321 42.105 95 53 2 17 111 22 114 1.01e-16 79.0
MsaG004142 MtrunA17_Chr5g0397841 41.905 105 58 3 6 110 103 204 1.27e-16 80.5
MsaG004142 MtrunA17_Chr7g0238651 38.182 110 65 2 11 118 4 112 1.61e-16 79.3
MsaG004142 MtrunA17_Chr7g0238631 34.839 155 91 5 6 153 106 257 1.78e-16 80.1
MsaG004142 MtrunA17_Chr7g0238631 35.238 105 59 3 9 110 58 156 8.00e-13 68.9
MsaG004142 MtrunA17_Chr8g0342461 46.429 84 43 2 4 86 5 87 1.81e-16 75.1
MsaG004142 MtrunA17_Chr8g0342471 46.429 84 43 2 4 86 5 87 5.32e-16 73.9
MsaG004142 MtrunA17_Chr4g0042501 38.462 104 59 3 17 117 108 209 1.91e-15 76.6
MsaG004142 MtrunA17_Chr1g0157731 37.273 110 66 3 6 115 84 190 1.95e-15 77.4
MsaG004142 MtrunA17_Chr1g0157731 36.449 107 56 3 9 110 35 134 4.64e-14 73.2
MsaG004142 MtrunA17_Chr3g0139671 37.273 110 66 3 6 115 78 184 2.28e-15 77.0
MsaG004142 MtrunA17_Chr3g0139671 37.383 107 55 3 9 110 29 128 1.75e-14 74.3
MsaG004142 MtrunA17_Chr3g0125801 39.423 104 58 3 17 117 19 120 4.93e-15 74.3
MsaG004142 MtrunA17_Chr7g0228531 37.624 101 60 2 17 117 223 320 5.76e-15 75.1
MsaG004142 MtrunA17_Chr5g0417621 37.500 104 60 3 17 117 137 238 9.39e-15 74.7
MsaG004142 MtrunA17_Chr6g0460671 35.897 117 73 2 8 124 93 207 2.03e-14 73.2
MsaG004142 MtrunA17_Chr3g0093811 39.560 91 50 3 37 123 4 93 5.20e-14 70.9
MsaG004142 MtrunA17_Chr7g0229101 45.070 71 38 1 44 114 4 73 6.52e-14 69.7
MsaG004142 MtrunA17_Chr1g0177901 40.659 91 52 2 24 114 4 92 7.80e-14 69.7
MsaG004142 MtrunA17_Chr7g0229131 35.714 98 57 2 44 136 4 100 1.27e-13 68.2
MsaG004142 MtrunA17_Chr5g0416341 32.847 137 85 3 7 143 19 148 1.45e-13 71.2
MsaG004142 MtrunA17_Chr7g0254261 36.111 108 67 2 17 124 92 197 2.41e-13 70.1
MsaG004142 MtrunA17_Chr7g0228481 37.755 98 58 2 17 114 223 317 3.48e-13 69.7
MsaG004142 MtrunA17_Chr5g0434901 40.580 69 40 1 46 114 7 74 1.68e-12 63.5
MsaG004142 MtrunA17_Chr8g0362231 31.304 115 77 2 7 121 15 127 3.11e-12 67.0
MsaG004142 MtrunA17_Chr7g0233061 43.077 65 36 1 50 114 213 276 1.90e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG004142 AT2G26960.1 46.541 159 74 4 9 158 18 174 5.87e-40 145
MsaG004142 AT2G32460.2 44.099 161 78 3 6 166 1 149 2.76e-38 142
MsaG004142 AT5G55020.1 53.782 119 53 2 11 129 26 142 4.03e-38 142
MsaG004142 AT2G32460.1 43.293 164 81 3 3 166 10 161 4.24e-38 141
MsaG004142 AT3G11440.2 55.085 118 51 2 11 128 41 156 1.94e-37 139
MsaG004142 AT5G06100.1 55.652 115 49 2 11 125 32 144 4.97e-37 138
MsaG004142 AT3G11440.3 55.085 118 51 2 11 128 41 156 5.93e-37 139
MsaG004142 AT3G11440.4 55.085 118 51 2 11 128 41 156 5.93e-37 139
MsaG004142 AT3G11440.1 55.085 118 51 2 11 128 41 156 5.93e-37 139
MsaG004142 AT5G06100.5 55.652 115 49 2 11 125 32 144 9.57e-37 138
MsaG004142 AT5G06100.2 55.652 115 49 2 11 125 32 144 9.57e-37 138
MsaG004142 AT5G06100.3 55.652 115 49 2 11 125 32 144 9.57e-37 138
MsaG004142 AT5G06100.4 55.652 115 49 2 11 125 32 144 9.57e-37 138
MsaG004142 AT4G21440.1 36.596 235 140 7 11 243 12 239 1.36e-36 135
MsaG004142 AT4G26930.1 53.043 115 52 2 11 125 19 131 1.47e-36 135
MsaG004142 AT2G26950.1 46.043 139 74 1 5 143 9 146 1.73e-35 132
MsaG004142 AT5G26660.1 51.240 121 56 3 4 123 5 123 2.47e-34 129
MsaG004142 AT5G54230.1 41.420 169 92 4 11 174 12 178 3.06e-34 127
MsaG004142 AT4G01680.3 43.151 146 80 3 4 148 5 148 7.36e-34 124
MsaG004142 AT4G28110.1 53.509 114 50 3 11 123 12 123 1.65e-33 125
MsaG004142 AT4G05100.1 53.509 114 50 3 11 123 13 124 3.27e-33 125
MsaG004142 AT4G01680.1 43.151 146 80 3 4 148 5 148 4.40e-33 125
MsaG004142 AT1G57560.2 50.000 122 58 3 4 124 5 124 7.56e-33 123
MsaG004142 AT1G57560.1 50.000 122 58 3 4 124 5 124 1.27e-32 123
MsaG004142 AT5G16770.4 52.381 105 48 2 11 115 12 114 3.47e-32 122
MsaG004142 AT5G16770.3 52.381 105 48 2 11 115 12 114 3.47e-32 122
MsaG004142 AT5G16770.1 52.381 105 48 2 11 115 12 114 6.88e-32 122
MsaG004142 AT5G16770.2 52.381 105 48 2 11 115 12 114 6.88e-32 122
MsaG004142 AT1G09540.1 49.587 121 58 3 4 123 5 123 1.04e-31 122
MsaG004142 AT5G10280.1 51.304 115 53 3 11 124 12 124 1.11e-31 121
MsaG004142 AT5G12870.1 51.852 108 50 2 9 116 16 121 1.22e-31 120
MsaG004142 AT3G08500.1 51.887 106 49 2 10 115 29 132 1.23e-31 121
MsaG004142 AT3G61250.1 48.246 114 56 3 11 123 12 123 1.44e-31 120
MsaG004142 AT3G02940.2 52.381 105 48 2 11 115 12 114 2.62e-31 119
MsaG004142 AT3G02940.1 52.381 105 48 2 11 115 12 114 5.80e-31 119
MsaG004142 AT3G02940.3 52.381 105 48 2 11 115 12 114 5.80e-31 119
MsaG004142 AT3G13890.2 48.214 112 56 2 4 115 5 114 6.76e-31 119
MsaG004142 AT1G22640.1 49.123 114 55 3 11 123 12 123 1.28e-30 116
MsaG004142 AT5G65230.1 51.304 115 53 3 11 124 12 124 1.31e-30 118
MsaG004142 AT4G37780.1 51.887 106 48 3 11 115 12 115 1.50e-30 117
MsaG004142 AT4G09460.1 49.074 108 53 2 17 123 17 123 1.61e-30 115
MsaG004142 AT4G38620.1 50.926 108 51 2 17 123 17 123 1.63e-30 117
MsaG004142 AT1G34670.1 50.435 115 54 3 11 124 12 124 2.48e-30 118
MsaG004142 AT5G56110.1 47.826 115 57 3 11 124 12 124 3.05e-30 117
MsaG004142 AT3G12720.1 46.281 121 62 3 10 129 21 139 3.21e-30 117
MsaG004142 AT1G74080.1 37.500 184 86 7 11 170 12 190 3.29e-30 117
MsaG004142 AT1G35515.1 50.000 108 52 2 17 123 17 123 3.70e-30 114
MsaG004142 AT4G17785.2 50.926 108 51 2 8 115 10 115 3.82e-30 117
MsaG004142 AT2G31180.1 32.937 252 126 9 11 246 12 236 4.09e-30 115
MsaG004142 AT4G17785.1 50.926 108 51 2 8 115 10 115 4.45e-30 117
MsaG004142 AT5G14750.1 50.000 104 50 2 8 111 13 114 5.75e-30 113
MsaG004142 AT3G28470.1 53.465 101 45 2 11 111 12 110 5.93e-30 116
MsaG004142 AT1G63910.1 47.826 115 58 2 4 118 5 117 5.96e-30 117
MsaG004142 AT4G34990.1 49.074 108 53 2 17 123 17 123 6.24e-30 115
MsaG004142 AT5G15310.4 48.571 105 52 2 11 115 12 114 6.84e-30 114
MsaG004142 AT4G01680.2 39.873 158 80 4 4 148 5 160 8.68e-30 116
MsaG004142 AT2G16720.1 49.074 108 53 2 17 123 17 123 9.61e-30 114
MsaG004142 AT3G01140.1 46.087 115 59 3 11 124 55 167 1.45e-29 116
MsaG004142 AT3G01140.2 46.087 115 59 3 11 124 12 124 1.46e-29 115
MsaG004142 AT5G62470.2 43.796 137 71 3 11 147 12 142 2.21e-29 115
MsaG004142 AT3G01530.1 44.444 117 60 2 4 116 13 128 2.40e-29 112
MsaG004142 AT5G15310.1 46.087 115 59 3 11 124 12 124 2.92e-29 114
MsaG004142 AT3G27920.1 49.074 108 53 2 8 115 11 116 3.31e-29 112
MsaG004142 AT5G15310.2 46.087 115 59 3 11 124 12 124 3.46e-29 114
MsaG004142 AT3G27810.1 49.057 106 52 2 11 116 20 123 3.50e-29 112
MsaG004142 AT3G49690.1 52.830 106 47 3 11 115 12 115 3.56e-29 114
MsaG004142 AT1G74650.1 48.571 105 52 2 11 115 12 114 3.89e-29 114
MsaG004142 AT1G18570.1 46.491 114 58 3 11 123 13 124 4.34e-29 114
MsaG004142 AT5G40350.1 48.113 106 53 2 11 116 17 120 4.50e-29 111
MsaG004142 AT5G23000.1 50.467 107 50 3 10 115 11 115 4.94e-29 114
MsaG004142 AT5G52600.1 44.538 119 64 2 11 129 12 128 5.48e-29 110
MsaG004142 AT5G60890.1 33.333 207 117 6 11 201 12 213 5.48e-29 113
MsaG004142 AT1G18710.1 44.348 115 61 3 11 124 12 124 6.54e-29 112
MsaG004142 AT3G23250.1 47.619 105 53 2 11 115 12 114 6.98e-29 112
MsaG004142 AT1G08810.1 49.524 105 51 2 11 115 12 114 7.51e-29 112
MsaG004142 AT1G16490.1 50.000 106 51 2 10 115 13 116 8.59e-29 112
MsaG004142 AT5G57620.1 50.943 106 49 3 11 115 12 115 1.08e-28 113
MsaG004142 AT3G13540.1 45.000 120 63 3 5 123 17 134 1.12e-28 111
MsaG004142 AT5G40330.1 49.038 104 51 2 12 115 13 114 1.34e-28 110
MsaG004142 AT1G79180.1 46.667 120 60 3 10 127 13 130 1.37e-28 112
MsaG004142 AT1G06180.1 48.624 109 54 2 11 119 12 118 1.44e-28 110
MsaG004142 AT1G56160.1 50.000 106 51 2 10 115 13 116 1.61e-28 112
MsaG004142 AT5G07690.1 48.571 105 52 2 11 115 12 114 1.67e-28 112
MsaG004142 AT3G47600.1 47.619 105 53 2 11 115 12 114 3.24e-28 112
MsaG004142 AT2G36890.1 45.690 116 60 3 11 125 12 125 3.48e-28 111
MsaG004142 AT1G48000.1 47.059 102 53 1 17 118 37 137 3.73e-28 109
MsaG004142 AT5G07700.1 47.619 105 53 2 11 115 12 114 4.41e-28 111
MsaG004142 AT5G07700.2 47.619 105 53 2 11 115 12 114 4.41e-28 111
MsaG004142 AT1G74430.1 44.348 115 61 3 11 124 12 124 4.72e-28 110
MsaG004142 AT2G36890.2 45.690 116 60 3 11 125 53 166 4.81e-28 111
MsaG004142 AT5G65790.1 51.887 106 48 3 11 115 12 115 4.97e-28 112
MsaG004142 AT3G13890.1 44.628 121 56 3 4 115 5 123 5.02e-28 112
MsaG004142 AT5G61420.2 45.614 114 59 3 11 123 12 123 5.04e-28 112
MsaG004142 AT5G62470.1 43.796 137 70 4 11 147 12 141 6.02e-28 111
MsaG004142 AT3G28910.1 48.571 105 52 2 11 115 12 114 7.26e-28 110
MsaG004142 AT3G12820.1 49.057 106 52 2 10 115 13 116 7.57e-28 108
MsaG004142 AT2G47190.1 45.872 109 57 2 11 119 20 126 1.03e-27 109
MsaG004142 AT2G47460.1 49.505 101 49 2 11 111 12 110 1.57e-27 110
MsaG004142 AT1G66230.1 46.774 124 60 4 11 130 12 133 3.37e-27 108
MsaG004142 AT3G62610.1 48.515 101 50 2 11 111 12 110 3.96e-27 109
MsaG004142 AT5G62320.1 46.281 121 55 4 11 123 13 131 4.23e-27 107
MsaG004142 AT5G14340.1 47.368 114 57 3 11 123 24 135 4.95e-27 107
MsaG004142 AT1G25340.1 45.631 103 55 1 17 119 23 124 5.45e-27 107
MsaG004142 AT5G35550.1 44.248 113 61 2 3 115 6 116 6.74e-27 107
MsaG004142 AT5G49330.1 49.505 101 49 2 11 111 12 110 7.31e-27 108
MsaG004142 AT1G68320.1 43.750 112 61 2 8 119 16 125 8.36e-27 107
MsaG004142 AT4G13480.1 49.495 99 49 1 17 115 11 108 2.55e-26 105
MsaG004142 AT5G16600.1 40.602 133 76 3 11 142 12 142 2.77e-26 106
MsaG004142 AT3G30210.1 47.059 102 53 1 17 118 32 132 3.86e-26 105
MsaG004142 AT3G60460.1 45.872 109 56 3 11 118 11 117 7.04e-26 105
MsaG004142 AT3G24310.1 47.475 99 51 1 17 115 23 120 1.03e-25 103
MsaG004142 AT3G48920.1 44.545 110 60 1 6 115 12 120 4.21e-25 102
MsaG004142 AT4G22680.1 45.217 115 60 3 11 124 12 124 6.38e-25 101
MsaG004142 AT1G66370.1 37.681 138 74 4 9 136 6 141 6.05e-24 98.6
MsaG004142 AT5G52260.1 35.749 207 117 4 9 201 10 214 6.86e-24 99.0
MsaG004142 AT3G06490.1 46.789 109 56 2 11 119 19 125 6.87e-24 100
MsaG004142 AT1G66380.1 42.857 112 61 3 7 117 4 113 9.56e-24 95.1
MsaG004142 AT4G12350.1 45.714 105 55 2 11 115 12 114 1.08e-23 99.0
MsaG004142 AT1G25340.2 43.689 103 52 2 17 119 23 119 2.14e-23 97.8
MsaG004142 AT1G79180.2 37.255 153 59 4 10 127 13 163 2.48e-23 98.6
MsaG004142 AT5G26660.2 50.000 86 41 2 39 123 8 92 2.54e-23 98.6
MsaG004142 AT1G25340.3 43.689 103 52 2 17 119 23 119 2.78e-23 98.2
MsaG004142 AT4G25560.1 45.794 107 56 2 9 115 8 112 3.44e-23 97.4
MsaG004142 AT3G53200.1 45.794 107 56 2 11 117 9 113 5.18e-23 95.9
MsaG004142 AT1G66390.1 41.964 112 62 3 7 117 4 113 6.26e-23 95.9
MsaG004142 AT1G56650.1 37.692 130 70 4 7 127 4 131 6.40e-23 95.9
MsaG004142 AT5G59780.3 42.593 108 61 1 17 124 13 119 7.87e-23 95.5
MsaG004142 AT3G46130.1 44.444 99 54 1 17 115 14 111 2.47e-22 94.4
MsaG004142 AT5G49620.1 44.660 103 56 1 17 119 31 132 2.63e-22 95.5
MsaG004142 AT3G50060.1 43.396 106 58 2 17 122 9 112 1.54e-21 93.2
MsaG004142 AT4G18770.1 40.876 137 72 5 9 139 208 341 2.22e-21 94.4
MsaG004142 AT5G49620.2 39.167 120 52 2 17 119 31 146 6.68e-21 91.7
MsaG004142 AT5G40350.2 51.351 74 35 1 43 116 3 75 1.85e-20 87.0
MsaG004142 AT4G37260.1 44.860 107 56 3 17 122 16 120 3.99e-20 89.7
MsaG004142 AT3G27810.2 52.778 72 33 1 45 116 4 74 4.71e-20 86.3
MsaG004142 AT5G58850.1 44.037 109 58 3 7 115 99 204 1.23e-19 89.4
MsaG004142 AT5G67300.1 47.000 100 50 3 17 115 9 106 1.47e-19 87.8
MsaG004142 AT3G27785.1 41.748 103 57 3 17 118 192 292 1.79e-19 89.0
MsaG004142 AT2G23290.1 45.000 100 52 3 17 115 16 113 3.41e-19 86.7
MsaG004142 AT5G40360.1 41.414 99 56 2 17 115 161 257 4.57e-19 87.0
MsaG004142 AT5G11050.1 38.406 138 79 4 9 143 101 235 1.02e-18 86.7
MsaG004142 AT3G53200.2 52.055 73 34 1 45 117 9 80 1.17e-18 83.2
MsaG004142 AT2G25230.1 37.594 133 74 5 5 130 13 143 2.33e-18 83.2
MsaG004142 AT3G12820.2 55.224 67 29 1 49 115 3 68 3.41e-18 81.6
MsaG004142 AT1G17950.1 39.450 109 62 3 17 123 8 114 4.40e-18 82.8
MsaG004142 AT2G39880.1 40.458 131 75 3 17 146 53 181 4.86e-18 84.3
MsaG004142 AT5G35550.2 52.113 71 33 1 45 115 50 119 1.60e-17 81.3
MsaG004142 AT3G09370.2 36.054 147 90 4 6 151 128 271 9.15e-17 81.3
MsaG004142 AT3G09370.2 37.255 102 61 2 9 110 80 178 6.90e-14 72.8
MsaG004142 AT3G55730.1 40.566 106 61 2 10 115 52 155 1.08e-16 80.5
MsaG004142 AT3G09370.1 36.054 147 90 4 6 151 123 266 1.09e-16 80.9
MsaG004142 AT3G09370.1 37.255 102 61 2 9 110 75 173 8.38e-14 72.4
MsaG004142 AT3G09370.3 36.054 147 90 4 6 151 136 279 1.17e-16 80.9
MsaG004142 AT3G09370.3 37.255 102 61 2 9 110 88 186 9.97e-14 72.0
MsaG004142 AT5G14750.3 43.373 83 41 2 38 115 3 84 1.18e-16 76.6
MsaG004142 AT4G33450.1 36.792 106 65 2 17 122 22 125 1.23e-16 78.6
MsaG004142 AT3G46130.3 48.611 72 36 1 44 115 9 79 1.30e-16 78.2
MsaG004142 AT5G17800.1 35.556 135 77 4 17 143 96 228 2.19e-16 79.0
MsaG004142 AT5G59780.2 45.000 80 43 1 45 124 20 98 3.29e-16 76.6
MsaG004142 AT3G46130.4 49.296 71 35 1 45 115 20 89 3.93e-16 77.0
MsaG004142 AT3G09230.1 37.000 100 61 2 17 116 58 155 6.57e-16 78.2
MsaG004142 AT1G73410.1 35.099 151 89 4 17 160 9 157 8.49e-16 76.3
MsaG004142 AT3G47600.2 46.479 71 37 1 45 115 39 108 8.53e-16 77.4
MsaG004142 AT2G37630.1 40.000 110 63 2 11 118 1 109 9.25e-16 77.8
MsaG004142 AT1G73410.2 35.099 151 89 4 17 160 9 157 9.29e-16 75.1
MsaG004142 AT1G26780.1 37.143 105 63 3 17 120 101 203 1.63e-15 75.9
MsaG004142 AT5G02320.3 38.182 110 65 3 6 115 60 166 1.63e-15 77.4
MsaG004142 AT5G02320.3 36.275 102 62 2 9 110 12 110 1.96e-13 71.2
MsaG004142 AT1G26780.2 37.500 104 62 3 17 119 101 202 1.75e-15 76.6
MsaG004142 AT5G02320.1 38.182 110 65 3 6 115 120 226 1.95e-15 77.4
MsaG004142 AT5G02320.1 35.849 106 57 3 9 110 72 170 2.25e-13 71.2
MsaG004142 AT5G02320.2 38.182 110 65 3 6 115 120 226 1.95e-15 77.4
MsaG004142 AT5G02320.2 35.849 106 57 3 9 110 72 170 2.25e-13 71.2
MsaG004142 AT1G69560.1 39.000 100 56 3 17 113 110 207 1.99e-15 76.3
MsaG004142 AT1G69560.2 39.000 100 56 3 17 113 126 223 2.11e-15 76.3
MsaG004142 AT4G32730.1 38.182 110 65 3 6 115 80 186 2.96e-15 77.0
MsaG004142 AT4G32730.1 35.514 107 57 3 9 110 31 130 3.14e-13 70.9
MsaG004142 AT4G32730.5 38.182 110 65 3 6 115 80 186 3.76e-15 76.6
MsaG004142 AT4G32730.5 35.514 107 57 3 9 110 31 130 3.83e-13 70.9
MsaG004142 AT4G32730.4 38.182 110 65 3 6 115 80 186 3.76e-15 76.6
MsaG004142 AT4G32730.4 35.514 107 57 3 9 110 31 130 3.83e-13 70.9
MsaG004142 AT4G32730.3 38.182 110 65 3 6 115 80 186 3.76e-15 76.6
MsaG004142 AT4G32730.3 35.514 107 57 3 9 110 31 130 3.83e-13 70.9
MsaG004142 AT4G32730.2 38.182 110 65 3 6 115 80 186 3.76e-15 76.6
MsaG004142 AT4G32730.2 35.514 107 57 3 9 110 31 130 3.83e-13 70.9
MsaG004142 AT4G00540.2 35.971 139 78 6 6 140 96 227 8.72e-15 75.1
MsaG004142 AT1G66380.3 45.333 75 39 2 44 117 7 80 1.03e-14 69.7
MsaG004142 AT4G00540.1 35.971 139 78 6 6 140 94 225 1.10e-14 74.7
MsaG004142 AT1G66380.2 44.118 68 37 1 7 74 4 70 2.41e-14 68.9
MsaG004142 AT3G29020.1 38.462 104 59 3 17 117 68 169 2.65e-14 71.6
MsaG004142 AT3G29020.2 38.462 104 59 3 17 117 70 171 4.08e-14 72.0
MsaG004142 AT1G14350.2 35.398 113 71 2 7 119 18 128 6.61e-14 72.4
MsaG004142 AT1G14350.1 35.398 113 71 2 7 119 18 128 6.61e-14 72.4
MsaG004142 AT2G02820.2 34.513 113 72 2 7 119 23 133 2.04e-13 71.2
MsaG004142 AT2G02820.1 34.513 113 72 2 7 119 23 133 2.22e-13 70.9
MsaG004142 AT5G40430.1 37.168 113 64 4 7 115 43 152 3.02e-13 68.9
MsaG004142 AT2G02820.3 36.893 103 63 2 17 119 33 133 4.43e-13 69.3
MsaG004142 AT5G11510.3 35.294 102 64 2 9 110 25 124 1.21e-12 69.3
MsaG004142 AT5G11510.3 22.776 281 201 7 6 283 74 341 8.71e-11 63.5
MsaG004142 AT5G11510.1 35.294 102 64 2 9 110 25 124 1.21e-12 69.3
MsaG004142 AT5G11510.1 22.776 281 201 7 6 283 74 341 8.71e-11 63.5
MsaG004142 AT5G11510.4 35.294 102 64 2 9 110 25 124 1.21e-12 69.3
MsaG004142 AT5G11510.4 22.776 281 201 7 6 283 74 341 8.71e-11 63.5
MsaG004142 AT5G11510.2 35.294 102 64 2 9 110 25 124 1.29e-12 68.9
MsaG004142 AT5G11510.2 22.776 281 201 7 6 283 74 341 4.42e-11 64.3
MsaG004142 AT5G11510.5 35.294 102 64 2 9 110 25 124 1.45e-12 68.9
MsaG004142 AT5G11510.5 22.776 281 201 7 6 283 74 341 3.52e-11 64.7
MsaG004142 AT1G22640.3 51.515 66 30 2 59 123 2 66 1.98e-12 65.9
MsaG004142 AT3G18100.2 39.604 101 52 4 12 109 332 426 4.98e-12 67.0
MsaG004142 AT3G18100.4 39.604 101 52 4 12 109 384 478 5.02e-12 67.0
MsaG004142 AT3G18100.3 39.604 101 52 4 12 109 497 591 5.13e-12 67.4
MsaG004142 AT3G18100.1 39.604 101 52 4 12 109 545 639 5.78e-12 67.0
MsaG004142 AT5G39700.1 37.864 103 62 2 9 111 51 151 5.87e-12 64.3

Find 71 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTTTGAAAACTGCTTATT+TGG 0.060651 1:-66110541 None:intergenic
ACATAATGAATCCGGAATTT+TGG 0.151632 1:+66110847 MsaT004142.1:CDS
CATCGTTGGTTACTAATAAA+AGG 0.209811 1:+66109850 MsaT004142.1:CDS
TGATACCTCCTTCCAATTTC+CGG 0.211449 1:-66109943 None:intergenic
GGAACCCTTATACGGATATT+TGG 0.228598 1:+66111094 MsaT004142.1:CDS
TCAAACCAAATATCCGTATA+AGG 0.245040 1:-66111099 None:intergenic
CTACTTCAACTTTGATTGAT+AGG 0.246409 1:+66110623 MsaT004142.1:CDS
AAAGTTCTTGATGTCATTAT+CGG 0.301665 1:-66110332 None:intergenic
CCTTTGGAGAACGATGAAAA+AGG 0.312790 1:+66110780 MsaT004142.1:CDS
ATAATGACATCAAGAACTTT+TGG 0.313765 1:+66110335 MsaT004142.1:CDS
CATTGTCATGCAAGTGTCTA+AGG 0.322693 1:-66110946 None:intergenic
TTTGAGTTATGTTCTAAGTT+TGG 0.324176 1:+66110077 MsaT004142.1:CDS
TGGTTTGAGGAACCCTTATA+CGG 0.340488 1:+66111086 MsaT004142.1:CDS
AACGCGTCATTCCAAAATTC+CGG 0.348622 1:-66110858 None:intergenic
ATGTCATTATCGGTTCTTCC+AGG 0.362890 1:-66110322 None:intergenic
ACTTTGAAAACTGCTTATTT+GGG 0.369164 1:-66110540 None:intergenic
TGATTTACAAATTTAACTTC+TGG 0.390627 1:-66110490 None:intergenic
CTGGAAGAAGGCAATTGCTT+TGG 0.394386 1:+66111034 MsaT004142.1:CDS
ACCAGTTCCATTATGCTGTC+AGG 0.395180 1:-66110403 None:intergenic
CTAAGTTTGGTGAGTTCAAA+TGG 0.403243 1:+66110090 MsaT004142.1:CDS
GAAGAAGGCAATTGCTTTGG+AGG 0.406913 1:+66111037 MsaT004142.1:CDS
TTGATGAAAGCCAGGTCATT+TGG 0.408351 1:+66111066 MsaT004142.1:CDS
ACCCTTCCCTGACAGCATAA+TGG 0.413171 1:+66110396 MsaT004142.1:CDS
TCTTCTTCTTCTTTACTAAA+CGG 0.425038 1:-66110047 None:intergenic
AAGGCATCATTAAAATCATA+TGG 0.427844 1:-66110927 None:intergenic
GCCTCCACTCCCACCACCTA+TGG 0.431643 1:+66110980 MsaT004142.1:CDS
CAAACCAAATATCCGTATAA+GGG 0.448378 1:-66111098 None:intergenic
CCCTGACAGCATAATGGAAC+TGG 0.449244 1:+66110402 MsaT004142.1:CDS
AAGCCAGGTCATTTGGTTTG+AGG 0.452339 1:+66111073 MsaT004142.1:CDS
GGAAGAAGGGAAGAAGCCTT+TGG 0.456662 1:+66110764 MsaT004142.1:CDS
GTCTCCATAGGTGGTGGGAG+TGG 0.457379 1:-66110984 None:intergenic
TTCATCGATTTCAGGGAAGA+AGG 0.458892 1:+66110750 MsaT004142.1:intron
GGTTGAAGAAAGGAACATTA+TGG 0.458991 1:+66109871 MsaT004142.1:CDS
AACGGACCCTTCTTTACATC+AGG 0.460974 1:-66110029 None:intergenic
AGATGTCAGAGATAAATAAC+TGG 0.463955 1:+66111015 MsaT004142.1:CDS
AAATATGTTCTTCAATAATG+TGG 0.466264 1:+66110576 MsaT004142.1:CDS
TCTACGACCTGATGTAAAGA+AGG 0.489579 1:+66110022 MsaT004142.1:CDS
CACTTGCATGACAATGCAAT+CGG 0.503317 1:+66110953 MsaT004142.1:CDS
GCATGACGACATAATGAATC+CGG 0.506299 1:+66110839 MsaT004142.1:CDS
GAGTATTATACCATCTAAAA+CGG 0.511421 1:-66110001 None:intergenic
TTATTAGTAACCAACGATGA+AGG 0.514942 1:-66109846 None:intergenic
AAGGCAATTGCTTTGGAGGA+AGG 0.515313 1:+66111041 MsaT004142.1:CDS
TCCATAGGTGGTGGGAGTGG+AGG 0.516845 1:-66110981 None:intergenic
AGCATAATGGAACTGGTTGA+TGG 0.518476 1:+66110409 MsaT004142.1:CDS
TTCCATTATGCTGTCAGGGA+AGG 0.522399 1:-66110398 None:intergenic
GATTCATTATGTCGTCATGC+AGG 0.522460 1:-66110836 None:intergenic
ACTAATAAAAGGTTGAAGAA+AGG 0.530614 1:+66109861 MsaT004142.1:CDS
AATATGTTCTTCAATAATGT+GGG 0.531232 1:+66110577 MsaT004142.1:CDS
GGAAGGTGTTGATGAAAGCC+AGG 0.532700 1:+66111058 MsaT004142.1:CDS
AGAGATAAATAACTGGAAGA+AGG 0.539212 1:+66111022 MsaT004142.1:CDS
GCTTCAACATCGTTCTGCAA+AGG 0.544551 1:-66110810 None:intergenic
TCCATTATGCTGTCAGGGAA+GGG 0.546278 1:-66110397 None:intergenic
CCAGTTCCATTATGCTGTCA+GGG 0.549285 1:-66110402 None:intergenic
TGTTGTGTCTCCATAGGTGG+TGG 0.552970 1:-66110990 None:intergenic
TAACATCATGCCTTCATCGT+TGG 0.558999 1:+66109836 None:intergenic
GATGGTCTGAAGAGTAGTAA+TGG 0.562995 1:+66110427 MsaT004142.1:CDS
TCATCGATTTCAGGGAAGAA+GGG 0.571612 1:+66110751 MsaT004142.1:intron
TGAGTTCAAATGGTCTAAGA+TGG 0.574582 1:+66110100 MsaT004142.1:CDS
ACATGGAACCGGAAATTGGA+AGG 0.586011 1:+66109935 MsaT004142.1:CDS
GTTCAACACATTAGTCAATG+AGG 0.597425 1:+66110878 MsaT004142.1:CDS
ATCTGATGTTGTGTCTCCAT+AGG 0.603150 1:-66110996 None:intergenic
ATGGTCTAAGATGGCTCTCG+AGG 0.607145 1:+66110109 MsaT004142.1:CDS
TGATGTTGTGTCTCCATAGG+TGG 0.616221 1:-66110993 None:intergenic
GTTGTGTCTCCATAGGTGGT+GGG 0.620759 1:-66110989 None:intergenic
GTTCCTCAAACCAAATGACC+TGG 0.626263 1:-66111076 None:intergenic
CTACGACCTGATGTAAAGAA+GGG 0.647996 1:+66110023 MsaT004142.1:CDS
GAAGGAGGTATCAAAGAACA+CGG 0.666684 1:+66109953 MsaT004142.1:CDS
AAAAGAAAACATGAAAGACA+TGG 0.669709 1:+66110367 MsaT004142.1:CDS
TGGAACCGGAAATTGGAAGG+AGG 0.696666 1:+66109938 MsaT004142.1:CDS
AACACGGGACTTGCACACTG+TGG 0.714946 1:+66109969 MsaT004142.1:CDS
AAGGAGGTATCAAAGAACAC+GGG 0.739276 1:+66109954 MsaT004142.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 66109843 66111121 66109843 ID=MsaG004142
Chr1 mRNA 66109843 66111121 66109843 ID=MsaT004142.1;Parent=MsaG004142
Chr1 exon 66109843 66110130 66109843 ID=MsaT004142.1.exon1;Parent=MsaT004142.1
Chr1 CDS 66109843 66110130 66109843 ID=cds.MsaT004142.1;Parent=MsaT004142.1
Chr1 exon 66110319 66110644 66110319 ID=MsaT004142.1.exon2;Parent=MsaT004142.1
Chr1 CDS 66110319 66110644 66110319 ID=cds.MsaT004142.1;Parent=MsaT004142.1
Chr1 exon 66110764 66111121 66110764 ID=MsaT004142.1.exon3;Parent=MsaT004142.1
Chr1 CDS 66110764 66111121 66110764 ID=cds.MsaT004142.1;Parent=MsaT004142.1
Gene Sequence

>MsaT004142.1

ATGCCTTCATCGTTGGTTACTAATAAAAGGTTGAAGAAAGGAACATTATGGTCAGAAGAAGAAGATGAAATATTAAAAGCATATGTTGAAAAACATGGAACCGGAAATTGGAAGGAGGTATCAAAGAACACGGGACTTGCACACTGTGGAAGAAGTTGCCGTTTTAGATGGTATAATACTCTACGACCTGATGTAAAGAAGGGTCCGTTTAGTAAAGAAGAAGAAGAGAAATTCTTTGAGTTATGTTCTAAGTTTGGTGAGTTCAAATGGTCTAAGATGGCTCTCGAGATGCCTGGAAGAACCGATAATGACATCAAGAACTTTTGGAATGCAAGAAAAAGAAAACATGAAAGACATGGCTTGTCACCCTTCCCTGACAGCATAATGGAACTGGTTGATGGTCTGAAGAGTAGTAATGGAAAAAGAATAAGGAATTCACAAGAAAACAAATTTAAGATACCAGAAGTTAAATTTGTAAATCAAATTCTGCATACAAACTTGTCTGATCTCCCAAATAAGCAGTTTTCAAAGTTGATTGATGATTCAAATATGTTCTTCAATAATGTGGGAAGTACTTCTACAAGCAATCATACTACTTCAACTTTGATTGATAGGGAAGAAGGGAAGAAGCCTTTGGAGAACGATGAAAAAGGGAAGAAGCCTTTGCAGAACGATGTTGAAGCAAACCTGCATGACGACATAATGAATCCGGAATTTTGGAATGACGCGTTCAACACATTAGTCAATGAGGTTTACAATGACTTGCATGACAAGCTTCCATATGATTTTAATGATGCCTTAGACACTTGCATGACAATGCAATCGGATCTGCCTCCACTCCCACCACCTATGGAGACACAACATCAGATGTCAGAGATAAATAACTGGAAGAAGGCAATTGCTTTGGAGGAAGGTGTTGATGAAAGCCAGGTCATTTGGTTTGAGGAACCCTTATACGGATATTTGGTTTGA
Protein sequence

>MsaT004142.1

MPSSLVTNKRLKKGTLWSEEEDEILKAYVEKHGTGNWKEVSKNTGLAHCGRSCRFRWYNTLRPDVKKGPFSKEEEEKFFELCSKFGEFKWSKMALEMPGRTDNDIKNFWNARKRKHERHGLSPFPDSIMELVDGLKSSNGKRIRNSQENKFKIPEVKFVNQILHTNLSDLPNKQFSKLIDDSNMFFNNVGSTSTSNHTTSTLIDREEGKKPLENDEKGKKPLQNDVEANLHDDIMNPEFWNDAFNTLVNEVYNDLHDKLPYDFNDALDTCMTMQSDLPPLPPPMETQHQMSEINNWKKAIALEEGVDESQVIWFEEPLYGYLV*