AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG004297


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG004297 MtrunA17_Chr1g0194951 93.817 372 10 4 1 360 1 371 0.0 695
MsaG004297 MtrunA17_Chr7g0269831 43.832 381 165 11 1 358 1 355 8.78e-84 258
MsaG004297 MtrunA17_Chr4g0068061 55.307 179 56 4 1 164 1 170 1.01e-60 198
MsaG004297 MtrunA17_Chr7g0275911 61.475 122 37 1 1 112 1 122 4.07e-51 171
MsaG004297 MtrunA17_Chr8g0346561 62.069 116 34 1 1 106 1 116 4.87e-49 167
MsaG004297 MtrunA17_Chr4g0070641 59.677 124 40 1 1 114 1 124 1.52e-48 161
MsaG004297 MtrunA17_Chr4g0070611 59.677 124 40 1 1 114 1 124 2.79e-48 165
MsaG004297 MtrunA17_Chr1g0187761 58.647 133 42 2 1 120 1 133 1.24e-47 162
MsaG004297 MtrunA17_Chr7g0217741 56.296 135 49 1 1 125 1 135 2.13e-47 162
MsaG004297 MtrunA17_Chr4g0042671 58.915 129 43 1 1 119 1 129 5.93e-47 164
MsaG004297 MtrunA17_Chr3g0131121 61.864 118 35 1 1 108 1 118 9.88e-47 160
MsaG004297 MtrunA17_Chr3g0115821 55.814 129 47 1 1 119 1 129 2.80e-46 161
MsaG004297 MtrunA17_Chr3g0121241 59.200 125 36 2 5 119 35 154 3.72e-46 159
MsaG004297 MtrunA17_Chr6g0453471 57.364 129 45 1 1 119 1 129 5.46e-46 160
MsaG004297 MtrunA17_Chr4g0039971 55.385 130 48 1 1 120 2 131 5.47e-46 160
MsaG004297 MtrunA17_Chr1g0167661 61.207 116 35 1 1 106 1 116 2.04e-45 156
MsaG004297 MtrunA17_Chr1g0167691 59.483 116 37 1 1 106 1 116 8.81e-45 154
MsaG004297 MtrunA17_Chr1g0203411 59.483 116 37 1 1 106 1 116 1.00e-44 155
MsaG004297 MtrunA17_Chr3g0110351 61.207 116 35 1 1 106 1 116 1.18e-44 155
MsaG004297 MtrunA17_Chr7g0261281 59.483 116 37 1 1 106 1 116 1.52e-44 154
MsaG004297 MtrunA17_Chr7g0228891 62.069 116 34 1 1 106 1 116 1.60e-44 154
MsaG004297 MtrunA17_Chr5g0434571 57.031 128 45 1 1 118 37 164 1.64e-44 156
MsaG004297 MtrunA17_Chr2g0281071 56.923 130 45 2 1 119 1 130 1.77e-44 156
MsaG004297 MtrunA17_Chr4g0037141 59.483 116 37 1 1 106 1 116 1.86e-44 154
MsaG004297 MtrunA17_Chr7g0274581 56.034 116 41 1 1 106 1 116 2.05e-44 152
MsaG004297 MtrunA17_Chr8g0385321 57.031 128 45 1 1 118 1 128 2.69e-44 155
MsaG004297 MtrunA17_Chr2g0323411 53.077 130 51 1 1 120 1 130 3.58e-44 155
MsaG004297 MtrunA17_Chr3g0103281 52.113 142 44 2 1 118 1 142 7.63e-44 154
MsaG004297 MtrunA17_Chr4g0048511 55.725 131 47 2 1 120 1 131 7.70e-44 155
MsaG004297 MtrunA17_Chr4g0057031 54.688 128 48 1 1 118 1 128 5.38e-43 150
MsaG004297 MtrunA17_Chr8g0349261 55.385 130 46 3 1 118 1 130 5.47e-43 151
MsaG004297 MtrunA17_Chr5g0410961 51.938 129 52 1 1 119 1 129 2.61e-42 150
MsaG004297 MtrunA17_Chr5g0435101 55.085 118 43 1 3 110 2 119 2.68e-42 146
MsaG004297 MtrunA17_Chr4g0060721 58.621 116 38 1 1 106 2 117 6.71e-42 149
MsaG004297 MtrunA17_Chr7g0254411 56.303 119 42 1 1 109 1 119 7.92e-42 149
MsaG004297 MtrunA17_Chr7g0217221 56.897 116 40 1 1 106 1 116 6.40e-41 145
MsaG004297 MtrunA17_Chr5g0395281 51.938 129 52 1 1 119 1 129 8.82e-41 145
MsaG004297 MtrunA17_Chr2g0330041 51.825 137 55 2 1 127 1 136 9.54e-41 147
MsaG004297 MtrunA17_Chr8g0342541 54.887 133 41 2 1 114 1 133 3.35e-40 145
MsaG004297 MtrunA17_Chr8g0342521 57.258 124 43 1 1 114 1 124 3.80e-40 145
MsaG004297 MtrunA17_Chr3g0092401 56.034 116 41 1 1 106 2 117 3.97e-40 144
MsaG004297 MtrunA17_Chr8g0342481 47.368 152 67 2 1 141 1 150 7.32e-40 145
MsaG004297 MtrunA17_Chr2g0311221 59.091 110 35 1 2 101 4 113 8.75e-40 143
MsaG004297 MtrunA17_Chr1g0193371 58.621 116 38 1 1 106 1 116 2.12e-39 143
MsaG004297 MtrunA17_Chr3g0117091 53.383 133 52 1 1 123 1 133 3.88e-39 142
MsaG004297 MtrunA17_Chr4g0058631 55.469 128 47 1 1 118 1 128 7.96e-39 141
MsaG004297 MtrunA17_Chr8g0387421 56.034 116 41 1 1 106 1 116 1.13e-38 140
MsaG004297 MtrunA17_Chr1g0193801 57.759 116 39 1 1 106 1 116 2.16e-38 141
MsaG004297 MtrunA17_Chr1g0211161 53.906 128 49 1 3 120 4 131 2.81e-38 136
MsaG004297 MtrunA17_Chr7g0270891 57.759 116 39 1 1 106 1 116 3.43e-38 140
MsaG004297 MtrunA17_Chr4g0055981 59.615 104 32 1 12 105 55 158 6.39e-38 135
MsaG004297 MtrunA17_Chr5g0397231 57.273 110 37 1 1 100 1 110 8.76e-38 138
MsaG004297 MtrunA17_Chr7g0271241 60.550 109 33 1 1 99 1 109 9.87e-38 139
MsaG004297 MtrunA17_Chr2g0323351 53.448 116 44 1 1 106 1 116 2.58e-37 134
MsaG004297 MtrunA17_Chr5g0400821 52.137 117 45 2 1 106 1 117 3.80e-37 135
MsaG004297 MtrunA17_Chr8g0343831 57.143 105 35 1 12 106 8 112 3.84e-37 134
MsaG004297 MtrunA17_Chr2g0294811 66.304 92 21 1 1 82 1 92 3.92e-37 130
MsaG004297 MtrunA17_Chr2g0309911 49.265 136 51 3 6 128 5 135 5.86e-37 135
MsaG004297 MtrunA17_Chr6g0453211 54.955 111 40 1 1 101 1 111 1.04e-36 135
MsaG004297 MtrunA17_Chr6g0487491 49.265 136 49 4 1 116 1 136 1.77e-36 133
MsaG004297 MtrunA17_Chr1g0151941 49.580 119 49 2 1 108 1 119 2.08e-36 132
MsaG004297 MtrunA17_Chr3g0135311 50.847 118 47 2 1 107 1 118 4.06e-36 134
MsaG004297 MtrunA17_Chr1g0152011 51.282 117 46 2 1 106 1 117 6.35e-36 133
MsaG004297 MtrunA17_Chr2g0328771 54.701 117 42 2 12 118 20 135 1.12e-35 132
MsaG004297 MtrunA17_Chr4g0022881 52.066 121 44 2 1 111 1 117 1.26e-35 129
MsaG004297 MtrunA17_Chr6g0452271 47.656 128 57 1 1 118 1 128 1.43e-35 132
MsaG004297 MtrunA17_Chr4g0022901 50.862 116 46 2 1 105 1 116 2.31e-35 130
MsaG004297 MtrunA17_Chr4g0022911 49.138 116 48 2 1 105 1 116 2.40e-35 130
MsaG004297 MtrunA17_Chr4g0022931 49.573 117 48 2 1 106 1 117 2.65e-35 130
MsaG004297 MtrunA17_Chr4g0054391 54.545 110 39 2 1 99 1 110 3.12e-35 130
MsaG004297 MtrunA17_Chr4g0022891 52.679 112 43 1 1 102 1 112 3.14e-35 129
MsaG004297 MtrunA17_Chr4g0044421 51.181 127 46 3 3 118 2 123 3.63e-35 127
MsaG004297 MtrunA17_Chr3g0088461 56.481 108 37 1 9 106 19 126 4.81e-35 131
MsaG004297 MtrunA17_Chr4g0028311 51.282 117 46 2 1 106 1 117 5.53e-35 130
MsaG004297 MtrunA17_Chr1g0194291 55.140 107 38 1 9 105 18 124 8.24e-35 128
MsaG004297 MtrunA17_Chr4g0032401 55.963 109 38 1 12 110 17 125 1.04e-34 130
MsaG004297 MtrunA17_Chr7g0264641 47.692 130 56 3 1 119 1 129 1.30e-34 128
MsaG004297 MtrunA17_Chr1g0168661 56.311 103 35 1 13 105 22 124 1.48e-34 127
MsaG004297 MtrunA17_Chr4g0072751 51.351 111 43 2 1 100 1 111 1.53e-34 130
MsaG004297 MtrunA17_Chr7g0240821 43.836 146 70 2 17 150 6 151 1.75e-34 126
MsaG004297 MtrunA17_Chr1g0186061 55.340 103 36 1 13 105 21 123 3.15e-34 127
MsaG004297 MtrunA17_Chr1g0209661 54.808 104 37 1 12 105 27 130 5.71e-34 127
MsaG004297 MtrunA17_Chr7g0228231 54.286 105 38 1 12 106 14 118 7.63e-34 124
MsaG004297 MtrunA17_Chr6g0450101 50.847 118 46 2 1 106 1 118 1.10e-33 124
MsaG004297 MtrunA17_Chr7g0220341 34.483 203 106 4 10 187 23 223 1.74e-33 125
MsaG004297 MtrunA17_Chr1g0203441 52.991 117 44 2 1 106 1 117 2.06e-33 125
MsaG004297 MtrunA17_Chr8g0354661 53.774 106 39 1 10 105 35 140 2.21e-33 130
MsaG004297 MtrunA17_Chr3g0080861 38.144 194 93 5 10 180 35 224 4.36e-33 129
MsaG004297 MtrunA17_Chr2g0327351 51.351 111 43 2 1 100 1 111 5.00e-33 125
MsaG004297 MtrunA17_Chr5g0417821 48.333 120 52 1 10 119 5 124 1.10e-32 123
MsaG004297 MtrunA17_Chr3g0099131 52.830 106 40 1 10 105 39 144 9.94e-32 125
MsaG004297 MtrunA17_Chr1g0194301 52.885 104 39 1 12 105 33 136 1.13e-31 120
MsaG004297 MtrunA17_Chr6g0470971 53.211 109 41 1 7 105 9 117 2.38e-31 119
MsaG004297 MtrunA17_Chr1g0154031 52.885 104 39 1 12 105 76 179 6.19e-31 121
MsaG004297 MtrunA17_Chr4g0042611 60.227 88 25 1 1 78 1 88 1.61e-30 111
MsaG004297 MtrunA17_Chr5g0434911 47.321 112 49 1 7 108 16 127 4.85e-30 116
MsaG004297 MtrunA17_Chr5g0434931 48.148 108 46 1 11 108 34 141 8.49e-30 115
MsaG004297 MtrunA17_Chr7g0247131 54.839 93 40 1 28 118 2 94 8.92e-30 115
MsaG004297 MtrunA17_Chr4g0068921 54.369 103 37 1 12 104 24 126 1.23e-29 112
MsaG004297 MtrunA17_Chr2g0322521 50.467 107 43 1 9 105 26 132 1.54e-29 117
MsaG004297 MtrunA17_Chr7g0228991 33.333 195 109 4 11 184 28 222 3.31e-29 114
MsaG004297 MtrunA17_Chr1g0192411 52.000 100 38 1 10 99 10 109 3.98e-29 116
MsaG004297 MtrunA17_Chr4g0030881 46.364 110 42 1 13 105 8 117 1.10e-28 112
MsaG004297 MtrunA17_Chr5g0434831 49.057 106 44 1 11 106 6 111 1.24e-28 110
MsaG004297 MtrunA17_Chr8g0360111 49.515 103 42 1 11 103 24 126 2.06e-28 111
MsaG004297 MtrunA17_Chr1g0180391 43.077 130 56 2 12 123 19 148 3.81e-28 110
MsaG004297 MtrunA17_Chr2g0293911 51.402 107 42 1 8 104 20 126 7.27e-28 111
MsaG004297 MtrunA17_Chr2g0327821 46.154 104 46 1 12 105 6 109 8.96e-27 106
MsaG004297 MtrunA17_Chr5g0434841 46.226 106 47 1 11 106 19 124 1.42e-26 107
MsaG004297 MtrunA17_Chr3g0133601 47.525 101 44 1 14 105 37 137 8.87e-26 103
MsaG004297 MtrunA17_Chr5g0440781 42.017 119 55 4 13 118 13 130 5.34e-25 100
MsaG004297 MtrunA17_Chr5g0440761 42.017 119 55 4 13 118 13 130 1.18e-24 101
MsaG004297 MtrunA17_Chr8g0342511 55.172 87 29 1 1 77 1 87 1.36e-24 96.3
MsaG004297 MtrunA17_Chr5g0441141 42.017 119 55 4 13 118 13 130 1.65e-24 101
MsaG004297 MtrunA17_Chr5g0401731 45.714 105 48 1 14 109 15 119 1.82e-24 102
MsaG004297 MtrunA17_Chr8g0342531 42.400 125 57 2 1 110 1 125 2.40e-24 97.8
MsaG004297 MtrunA17_Chr4g0053431 45.714 105 48 1 14 109 5 109 4.83e-24 99.8
MsaG004297 MtrunA17_Chr8g0334881 44.231 104 47 2 12 104 10 113 7.09e-24 100
MsaG004297 MtrunA17_Chr4g0013361 43.519 108 50 2 8 104 6 113 8.62e-24 99.8
MsaG004297 MtrunA17_Chr4g0008551 47.525 101 44 1 14 105 38 138 2.16e-23 99.4
MsaG004297 MtrunA17_Chr5g0441131 44.118 102 46 2 10 100 7 108 5.19e-23 94.7
MsaG004297 MtrunA17_Chr6g0454921 41.905 105 52 1 14 109 15 119 1.25e-22 94.4
MsaG004297 MtrunA17_Chr2g0323321 51.087 92 34 2 1 82 1 91 1.31e-22 91.7
MsaG004297 MtrunA17_Chr6g0480581 40.909 110 50 2 14 108 4 113 4.10e-22 94.0
MsaG004297 MtrunA17_Chr3g0099141 50.602 83 31 1 12 84 40 122 4.75e-22 90.9
MsaG004297 MtrunA17_Chr8g0342461 50.000 90 34 1 1 79 1 90 4.87e-22 90.9
MsaG004297 MtrunA17_Chr8g0342471 50.000 90 34 1 1 79 1 90 5.29e-22 90.9
MsaG004297 MtrunA17_Chr7g0229101 60.000 65 26 0 38 102 8 72 8.95e-22 92.0
MsaG004297 MtrunA17_Chr3g0117511 36.025 161 82 4 8 149 177 335 1.46e-21 95.5
MsaG004297 MtrunA17_Chr5g0429661 45.631 103 47 1 12 105 120 222 1.93e-21 94.0
MsaG004297 MtrunA17_Chr4g0042501 42.574 101 49 1 14 105 105 205 5.53e-21 93.6
MsaG004297 MtrunA17_Chr4g0058991 41.818 110 54 2 8 108 203 311 7.14e-21 93.6
MsaG004297 MtrunA17_Chr5g0395221 48.864 88 35 1 1 78 1 88 7.71e-21 85.9
MsaG004297 MtrunA17_Chr5g0437321 43.878 98 46 1 14 102 19 116 1.02e-20 90.9
MsaG004297 MtrunA17_Chr5g0417621 41.176 102 51 1 14 106 134 235 1.54e-20 92.4
MsaG004297 MtrunA17_Chr7g0229131 46.988 83 44 0 35 117 5 87 1.93e-20 87.4
MsaG004297 MtrunA17_Chr6g0460661 38.614 101 53 1 14 105 16 116 2.62e-20 86.7
MsaG004297 MtrunA17_Chr5g0434901 55.385 65 29 0 38 102 9 73 4.16e-20 84.7
MsaG004297 MtrunA17_Chr3g0093811 54.167 72 33 0 35 106 15 86 1.17e-19 87.4
MsaG004297 MtrunA17_Chr7g0238631 39.024 123 64 2 12 125 111 231 1.84e-19 89.7
MsaG004297 MtrunA17_Chr3g0139671 39.252 107 56 1 12 109 83 189 4.28e-19 89.0
MsaG004297 MtrunA17_Chr3g0139671 37.864 103 54 3 14 106 33 135 3.05e-12 68.2
MsaG004297 MtrunA17_Chr1g0157731 37.383 107 58 1 12 109 89 195 6.76e-19 88.6
MsaG004297 MtrunA17_Chr1g0157731 36.893 103 55 3 14 106 39 141 1.92e-12 68.6
MsaG004297 MtrunA17_Chr6g0460671 41.584 101 50 1 14 105 99 199 1.50e-18 85.9
MsaG004297 MtrunA17_Chr3g0125801 39.815 108 56 1 14 112 16 123 1.63e-18 84.7
MsaG004297 MtrunA17_Chr7g0254261 39.604 101 52 1 14 105 89 189 2.35e-17 82.4
MsaG004297 MtrunA17_Chr5g0425591 42.353 85 38 2 10 83 7 91 3.58e-16 73.2
MsaG004297 MtrunA17_Chr5g0397841 42.268 97 47 1 12 99 108 204 5.49e-16 79.0
MsaG004297 MtrunA17_Chr7g0228531 38.095 105 55 2 10 105 216 319 6.03e-16 78.6
MsaG004297 MtrunA17_Chr7g0238651 35.052 97 51 1 14 98 7 103 6.02e-15 75.1
MsaG004297 MtrunA17_Chr7g0228401 43.421 76 43 0 25 100 299 374 1.11e-14 75.1
MsaG004297 MtrunA17_Chr7g0228481 38.000 100 52 2 10 100 216 314 1.64e-14 74.3
MsaG004297 MtrunA17_Chr1g0177901 41.860 86 41 1 24 100 4 89 3.27e-14 70.9
MsaG004297 MtrunA17_Chr7g0233061 36.458 96 50 2 14 100 180 273 3.96e-14 72.8
MsaG004297 MtrunA17_Chr7g0247141 71.795 39 10 1 1 38 1 39 8.60e-14 65.5
MsaG004297 MtrunA17_Chr5g0416341 36.559 93 50 1 17 100 29 121 1.61e-13 71.6
MsaG004297 MtrunA17_Chr6g0453751 39.130 92 37 3 11 83 19 110 4.61e-13 65.9
MsaG004297 MtrunA17_Chr5g0434871 55.556 45 20 0 64 108 2 46 7.93e-13 63.2
MsaG004297 MtrunA17_Chr2g0294821 45.679 81 39 2 79 159 5 80 5.04e-12 65.5
MsaG004297 MtrunA17_Chr8g0362231 34.409 93 52 1 17 100 25 117 1.82e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG004297 AT2G47460.1 37.783 397 184 14 1 360 1 371 1.17e-64 210
MsaG004297 AT5G49330.1 60.355 169 40 2 1 142 1 169 1.59e-63 206
MsaG004297 AT3G62610.1 46.371 248 109 4 1 232 1 240 2.96e-56 187
MsaG004297 AT3G61250.1 57.031 128 45 1 1 118 1 128 1.62e-47 163
MsaG004297 AT5G15310.4 56.589 129 46 1 1 119 1 129 5.63e-47 160
MsaG004297 AT1G35515.1 55.396 139 48 2 1 125 1 139 7.92e-47 159
MsaG004297 AT5G15310.1 56.589 129 46 1 1 119 1 129 1.29e-46 161
MsaG004297 AT5G15310.2 56.589 129 46 1 1 119 1 129 1.52e-46 161
MsaG004297 AT2G31180.1 61.207 116 35 1 1 106 1 116 2.42e-46 159
MsaG004297 AT1G06180.1 59.829 117 37 1 1 107 1 117 7.64e-46 157
MsaG004297 AT4G28110.1 57.759 116 39 1 1 106 1 116 8.00e-46 158
MsaG004297 AT3G02940.2 55.039 129 48 1 1 119 1 129 1.00e-45 159
MsaG004297 AT4G21440.1 40.465 215 99 6 1 195 1 206 1.41e-45 159
MsaG004297 AT3G02940.1 55.039 129 48 1 1 119 1 129 1.85e-45 158
MsaG004297 AT3G02940.3 55.039 129 48 1 1 119 1 129 1.85e-45 158
MsaG004297 AT3G01140.2 60.345 116 36 1 1 106 1 116 2.51e-45 159
MsaG004297 AT2G16720.1 60.169 118 37 1 1 108 1 118 3.12e-45 156
MsaG004297 AT5G16600.1 57.812 128 44 1 1 118 1 128 3.24e-45 158
MsaG004297 AT1G34670.1 55.814 129 47 1 1 119 1 129 3.66e-45 159
MsaG004297 AT4G38620.1 60.345 116 36 1 1 106 1 116 4.01e-45 156
MsaG004297 AT5G65230.1 54.135 133 51 1 1 123 1 133 4.45e-45 157
MsaG004297 AT1G22640.1 58.475 118 39 1 1 108 1 118 6.11e-45 155
MsaG004297 AT3G23250.1 51.852 135 55 1 1 125 1 135 9.90e-45 155
MsaG004297 AT1G66230.1 57.031 128 45 1 1 118 1 128 1.13e-44 155
MsaG004297 AT5G16770.4 55.039 129 48 1 1 119 1 129 1.47e-44 156
MsaG004297 AT5G16770.3 55.039 129 48 1 1 119 1 129 1.47e-44 156
MsaG004297 AT5G16770.1 55.039 129 48 1 1 119 1 129 2.19e-44 156
MsaG004297 AT5G16770.2 55.039 129 48 1 1 119 1 129 2.19e-44 156
MsaG004297 AT4G34990.1 60.345 116 36 1 1 106 1 116 3.20e-44 154
MsaG004297 AT4G17785.2 52.941 136 53 2 1 125 1 136 4.66e-44 155
MsaG004297 AT4G17785.1 52.941 136 53 2 1 125 1 136 5.39e-44 155
MsaG004297 AT4G09460.1 59.322 118 38 1 1 108 1 118 6.41e-44 152
MsaG004297 AT3G13540.1 60.177 113 35 1 4 106 15 127 7.36e-44 152
MsaG004297 AT1G16490.1 58.974 117 38 1 2 108 4 120 1.08e-43 152
MsaG004297 AT4G05100.1 53.846 130 49 2 1 119 1 130 2.39e-43 153
MsaG004297 AT5G14340.1 56.250 128 46 1 1 118 13 140 8.46e-43 150
MsaG004297 AT5G62470.1 59.130 115 38 1 1 106 1 115 2.09e-42 151
MsaG004297 AT1G79180.1 56.693 127 43 2 2 118 4 128 2.33e-42 149
MsaG004297 AT4G22680.1 53.906 128 49 1 1 118 1 128 2.35e-42 149
MsaG004297 AT3G01140.1 59.292 113 36 1 4 106 47 159 2.57e-42 152
MsaG004297 AT5G62470.2 58.621 116 38 1 1 106 1 116 3.45e-42 150
MsaG004297 AT4G12350.1 53.125 128 50 1 1 118 1 128 2.69e-41 146
MsaG004297 AT5G60890.1 55.172 116 42 1 1 106 1 116 3.26e-41 146
MsaG004297 AT5G10280.1 52.713 129 51 1 1 119 1 129 3.98e-41 147
MsaG004297 AT1G74080.1 57.895 114 38 1 1 104 1 114 6.92e-41 147
MsaG004297 AT5G07690.1 51.111 135 56 1 1 125 1 135 9.92e-41 146
MsaG004297 AT5G61420.2 56.034 116 41 1 1 106 1 116 1.08e-40 147
MsaG004297 AT3G47600.1 56.034 116 41 1 1 106 1 116 1.53e-40 145
MsaG004297 AT3G12820.1 57.895 114 38 1 3 106 5 118 2.36e-40 142
MsaG004297 AT1G56160.1 57.391 115 39 1 2 106 4 118 2.41e-40 144
MsaG004297 AT1G74650.1 56.034 116 41 1 1 106 1 116 2.44e-40 145
MsaG004297 AT5G56110.1 53.125 128 50 1 1 118 1 128 3.01e-40 144
MsaG004297 AT1G08810.1 55.172 116 42 1 1 106 1 116 3.05e-40 144
MsaG004297 AT3G13890.2 56.780 118 41 1 1 108 1 118 1.43e-39 144
MsaG004297 AT5G54230.1 40.000 205 107 3 1 195 1 199 1.96e-39 142
MsaG004297 AT1G63910.1 51.128 133 55 1 1 123 1 133 5.24e-39 142
MsaG004297 AT5G26660.1 54.545 132 50 1 1 122 1 132 6.02e-39 142
MsaG004297 AT4G01680.3 58.621 116 38 1 1 106 1 116 8.75e-39 139
MsaG004297 AT5G07700.1 54.310 116 43 1 1 106 1 116 1.00e-38 141
MsaG004297 AT5G07700.2 54.310 116 43 1 1 106 1 116 1.00e-38 141
MsaG004297 AT1G18570.1 54.701 117 42 2 1 106 1 117 1.25e-38 141
MsaG004297 AT1G09540.1 58.621 116 38 1 1 106 1 116 1.42e-38 141
MsaG004297 AT3G28910.1 56.034 116 41 1 1 106 1 116 1.87e-38 140
MsaG004297 AT5G40330.1 39.326 178 90 4 13 175 13 187 3.33e-38 136
MsaG004297 AT4G37780.1 52.941 119 45 2 1 108 1 119 3.48e-38 139
MsaG004297 AT3G13890.1 52.756 127 41 1 1 108 1 127 3.54e-38 140
MsaG004297 AT4G01680.1 58.621 116 38 1 1 106 1 116 3.85e-38 139
MsaG004297 AT1G57560.2 56.897 116 40 1 1 106 1 116 4.05e-38 138
MsaG004297 AT1G57560.1 56.897 116 40 1 1 106 1 116 5.01e-38 139
MsaG004297 AT5G35550.1 51.079 139 51 2 12 133 14 152 1.85e-37 135
MsaG004297 AT1G79180.2 45.946 148 37 1 2 106 4 151 2.22e-37 137
MsaG004297 AT5G14750.1 55.769 104 36 1 13 106 17 120 2.64e-37 133
MsaG004297 AT3G12720.1 53.982 113 42 1 6 108 16 128 1.32e-36 134
MsaG004297 AT4G01680.2 53.125 128 38 1 1 106 1 128 2.10e-36 135
MsaG004297 AT3G49690.1 52.137 117 45 2 1 106 1 117 2.67e-36 134
MsaG004297 AT5G12870.1 55.963 109 38 1 12 110 18 126 3.60e-36 133
MsaG004297 AT3G28470.1 53.636 110 41 1 1 100 1 110 5.57e-36 133
MsaG004297 AT3G08500.1 58.333 108 35 1 9 106 27 134 7.35e-36 134
MsaG004297 AT5G52600.1 55.769 104 36 1 12 105 12 115 8.82e-36 129
MsaG004297 AT5G23000.1 52.137 117 45 2 1 106 1 117 1.43e-35 132
MsaG004297 AT5G65790.1 51.282 117 46 2 1 106 1 117 1.84e-35 133
MsaG004297 AT5G62320.1 47.761 134 48 2 2 118 3 131 2.44e-35 129
MsaG004297 AT3G27920.1 51.181 127 45 4 13 126 15 137 5.32e-35 128
MsaG004297 AT3G24310.1 55.556 108 38 1 11 108 17 124 1.15e-34 128
MsaG004297 AT2G36890.1 47.287 129 52 3 1 118 1 124 1.77e-34 129
MsaG004297 AT1G74430.1 49.219 128 55 1 1 118 1 128 1.91e-34 128
MsaG004297 AT4G13480.1 49.580 119 50 1 13 121 7 125 2.38e-34 127
MsaG004297 AT2G36890.2 47.287 129 52 3 1 118 42 165 3.04e-34 129
MsaG004297 AT5G57620.1 50.427 117 47 2 1 106 1 117 3.31e-34 129
MsaG004297 AT3G30210.1 53.153 111 42 1 11 111 26 136 8.85e-34 126
MsaG004297 AT5G40350.1 51.754 114 45 1 12 115 17 130 1.51e-33 124
MsaG004297 AT2G32460.1 51.786 112 44 1 4 105 10 121 1.94e-33 130
MsaG004297 AT5G55020.1 53.271 107 40 1 10 106 24 130 5.28e-33 129
MsaG004297 AT2G32460.2 53.333 105 39 1 11 105 5 109 5.33e-33 128
MsaG004297 AT5G06100.1 53.333 105 39 1 11 105 31 135 6.51e-33 127
MsaG004297 AT1G48000.1 54.286 105 38 1 10 104 30 134 7.05e-33 123
MsaG004297 AT1G68320.1 53.846 104 38 1 12 105 19 122 7.50e-33 124
MsaG004297 AT3G01530.1 54.286 105 38 1 12 106 25 129 1.03e-32 121
MsaG004297 AT5G06100.5 53.333 105 39 1 11 105 31 135 1.66e-32 127
MsaG004297 AT5G06100.2 53.333 105 39 1 11 105 31 135 1.66e-32 127
MsaG004297 AT5G06100.3 53.333 105 39 1 11 105 31 135 1.66e-32 127
MsaG004297 AT5G06100.4 53.333 105 39 1 11 105 31 135 1.66e-32 127
MsaG004297 AT3G27810.1 53.333 105 39 1 12 106 20 124 2.77e-32 121
MsaG004297 AT1G66370.1 50.435 115 43 2 1 105 1 111 2.85e-32 121
MsaG004297 AT4G26930.1 51.429 105 41 1 10 104 17 121 4.59e-32 124
MsaG004297 AT3G11440.2 52.885 104 39 1 12 105 41 144 8.49e-32 125
MsaG004297 AT2G47190.1 50.000 104 42 1 12 105 20 123 1.39e-31 120
MsaG004297 AT1G25340.1 51.456 103 40 1 13 105 19 121 1.46e-31 120
MsaG004297 AT1G18710.1 43.357 143 69 2 1 131 1 143 1.51e-31 120
MsaG004297 AT3G11440.3 52.885 104 39 1 12 105 41 144 2.31e-31 124
MsaG004297 AT3G11440.4 52.885 104 39 1 12 105 41 144 2.31e-31 124
MsaG004297 AT3G11440.1 52.885 104 39 1 12 105 41 144 2.31e-31 124
MsaG004297 AT1G25340.2 53.061 98 41 1 13 105 19 116 3.04e-31 119
MsaG004297 AT1G25340.3 53.061 98 41 1 13 105 19 116 5.84e-31 119
MsaG004297 AT4G25560.1 55.340 103 36 1 13 105 11 113 1.45e-30 118
MsaG004297 AT3G12820.2 71.014 69 20 0 38 106 2 70 2.48e-30 115
MsaG004297 AT1G56650.1 51.786 112 44 1 11 112 7 118 7.28e-30 115
MsaG004297 AT3G06490.1 54.206 107 39 1 8 104 15 121 9.80e-30 117
MsaG004297 AT5G14750.3 54.762 84 38 0 23 106 3 86 2.10e-29 111
MsaG004297 AT1G66380.1 52.381 105 40 1 11 105 7 111 2.47e-29 110
MsaG004297 AT5G35550.2 53.271 107 43 1 34 133 49 155 4.15e-29 113
MsaG004297 AT5G59780.3 48.544 103 43 1 13 105 9 111 6.22e-29 112
MsaG004297 AT3G46130.1 48.571 105 44 1 11 105 8 112 8.39e-29 112
MsaG004297 AT2G26960.1 48.113 106 45 1 9 104 17 122 8.91e-29 116
MsaG004297 AT3G53200.1 53.846 104 38 1 12 105 9 112 1.08e-28 112
MsaG004297 AT5G49620.1 53.271 107 40 1 8 104 22 128 1.21e-28 113
MsaG004297 AT5G52260.1 52.427 103 39 1 13 105 13 115 1.66e-28 112
MsaG004297 AT1G66390.1 52.381 105 40 1 11 105 7 111 7.16e-28 110
MsaG004297 AT5G26660.2 61.364 88 34 0 35 122 14 101 1.06e-27 111
MsaG004297 AT3G48920.1 47.115 104 45 1 13 106 19 122 1.79e-26 106
MsaG004297 AT5G40350.2 63.768 69 25 0 38 106 8 76 4.59e-26 102
MsaG004297 AT3G27810.2 62.319 69 26 0 38 106 7 75 1.74e-25 101
MsaG004297 AT3G60460.1 44.954 109 49 2 7 104 6 114 3.20e-25 103
MsaG004297 AT5G49620.2 47.107 121 40 2 8 104 22 142 4.34e-25 103
MsaG004297 AT5G59780.2 61.765 68 26 0 38 105 23 90 2.33e-24 99.8
MsaG004297 AT3G09230.1 44.860 107 50 1 14 111 55 161 3.19e-24 102
MsaG004297 AT3G46130.4 53.409 88 35 1 24 105 3 90 5.87e-24 99.0
MsaG004297 AT3G46130.3 61.765 68 26 0 38 105 13 80 6.16e-24 99.0
MsaG004297 AT3G47600.2 59.722 72 29 0 35 106 39 110 8.70e-24 100
MsaG004297 AT1G69560.1 28.634 227 129 6 9 214 102 316 9.37e-24 100
MsaG004297 AT1G69560.2 28.634 227 129 6 9 214 118 332 1.32e-23 100
MsaG004297 AT2G23290.1 46.535 101 45 1 14 105 13 113 2.63e-23 99.0
MsaG004297 AT3G53200.2 61.765 68 26 0 38 105 12 79 4.15e-23 95.9
MsaG004297 AT3G55730.1 48.515 101 43 1 14 105 56 156 4.18e-23 99.8
MsaG004297 AT2G39880.1 48.515 101 43 1 14 105 50 150 5.52e-23 99.0
MsaG004297 AT3G50060.1 40.800 125 65 1 14 129 6 130 1.31e-22 97.1
MsaG004297 AT4G37260.1 44.554 101 47 1 14 105 13 113 2.13e-22 96.7
MsaG004297 AT1G66380.3 60.294 68 27 0 38 105 11 78 5.15e-22 90.1
MsaG004297 AT5G67300.1 45.545 101 46 1 14 105 6 106 1.00e-21 94.4
MsaG004297 AT1G26780.2 26.923 234 135 7 12 224 96 314 1.28e-21 95.1
MsaG004297 AT1G22640.3 62.295 61 23 0 48 108 1 61 2.11e-21 91.3
MsaG004297 AT2G26950.1 41.509 106 52 2 9 104 13 118 2.45e-21 94.4
MsaG004297 AT1G26780.1 41.748 103 51 1 12 105 96 198 4.06e-21 92.4
MsaG004297 AT3G27785.1 41.121 107 54 1 8 105 183 289 6.06e-21 94.0
MsaG004297 AT1G17950.1 40.741 108 55 1 14 112 5 112 7.77e-21 90.9
MsaG004297 AT4G18770.1 40.741 108 55 1 8 106 211 318 1.15e-20 93.2
MsaG004297 AT5G14750.4 59.322 59 24 0 48 106 1 59 1.41e-20 87.4
MsaG004297 AT5G14750.2 59.322 59 24 0 48 106 1 59 1.41e-20 87.4
MsaG004297 AT5G58850.1 43.689 103 49 1 12 105 103 205 3.14e-20 91.7
MsaG004297 AT5G02320.1 41.346 104 52 1 12 106 125 228 6.24e-20 91.7
MsaG004297 AT5G02320.2 41.346 104 52 1 12 106 125 228 6.24e-20 91.7
MsaG004297 AT5G40360.1 35.659 129 72 3 1 119 145 272 6.67e-20 90.1
MsaG004297 AT5G02320.3 41.346 104 52 1 12 106 65 168 7.24e-20 91.3
MsaG004297 AT3G09370.2 42.718 103 50 1 12 105 133 235 9.54e-20 90.9
MsaG004297 AT3G09370.1 42.718 103 50 1 12 105 128 230 1.01e-19 90.9
MsaG004297 AT3G09370.3 42.718 103 50 1 12 105 141 243 1.15e-19 90.5
MsaG004297 AT3G23250.2 59.322 59 24 0 48 106 1 59 1.39e-19 87.0
MsaG004297 AT3G29020.2 30.769 182 88 5 14 167 67 238 1.48e-19 88.2
MsaG004297 AT5G11050.1 43.564 101 48 1 14 105 105 205 1.56e-19 89.7
MsaG004297 AT5G11510.5 35.714 126 72 1 12 128 79 204 2.07e-19 90.1
MsaG004297 AT5G11510.5 35.922 103 56 2 14 106 29 131 4.15e-11 65.1
MsaG004297 AT5G11510.3 35.714 126 72 1 12 128 79 204 2.35e-19 90.1
MsaG004297 AT5G11510.3 35.922 103 56 2 14 106 29 131 4.16e-11 65.1
MsaG004297 AT5G11510.1 35.714 126 72 1 12 128 79 204 2.35e-19 90.1
MsaG004297 AT5G11510.1 35.922 103 56 2 14 106 29 131 4.16e-11 65.1
MsaG004297 AT5G11510.4 35.714 126 72 1 12 128 79 204 2.35e-19 90.1
MsaG004297 AT5G11510.4 35.922 103 56 2 14 106 29 131 4.16e-11 65.1
MsaG004297 AT5G11510.2 35.714 126 72 1 12 128 79 204 2.55e-19 90.1
MsaG004297 AT5G11510.2 35.922 103 56 2 14 106 29 131 4.59e-11 64.7
MsaG004297 AT3G29020.1 40.196 102 52 1 14 106 65 166 3.66e-19 85.9
MsaG004297 AT1G73410.1 41.121 107 54 1 14 111 6 112 5.26e-19 85.5
MsaG004297 AT1G71030.2 56.061 66 29 0 41 106 5 70 5.28e-19 84.0
MsaG004297 AT1G73410.2 41.121 107 54 1 14 111 6 112 5.50e-19 84.7
MsaG004297 AT1G71030.1 56.061 66 29 0 41 106 19 84 6.02e-19 84.3
MsaG004297 AT4G32730.1 37.383 107 58 1 12 109 85 191 2.23e-18 87.0
MsaG004297 AT4G32730.1 35.922 103 56 3 14 106 35 137 8.39e-12 67.0
MsaG004297 AT4G32730.5 37.383 107 58 1 12 109 85 191 2.32e-18 87.4
MsaG004297 AT4G32730.5 35.922 103 56 3 14 106 35 137 7.83e-12 67.4
MsaG004297 AT4G32730.4 37.383 107 58 1 12 109 85 191 2.32e-18 87.4
MsaG004297 AT4G32730.4 35.922 103 56 3 14 106 35 137 7.83e-12 67.4
MsaG004297 AT4G32730.3 37.383 107 58 1 12 109 85 191 2.32e-18 87.4
MsaG004297 AT4G32730.3 35.922 103 56 3 14 106 35 137 7.83e-12 67.4
MsaG004297 AT4G32730.2 37.383 107 58 1 12 109 85 191 2.32e-18 87.4
MsaG004297 AT4G32730.2 35.922 103 56 3 14 106 35 137 7.83e-12 67.4
MsaG004297 AT4G33450.1 33.758 157 83 5 3 143 13 164 3.40e-18 83.6
MsaG004297 AT5G17800.1 37.624 101 54 1 14 105 93 193 1.39e-17 82.8
MsaG004297 AT5G39700.1 37.624 101 54 1 15 106 57 157 5.76e-16 75.9
MsaG004297 AT4G00540.2 36.364 110 58 1 12 109 101 210 1.05e-15 78.2
MsaG004297 AT1G18960.1 38.000 100 49 3 17 106 13 109 1.28e-15 77.0
MsaG004297 AT4G00540.1 36.364 110 58 1 12 109 99 208 1.43e-15 78.2
MsaG004297 AT1G66380.2 45.238 84 36 1 11 84 7 90 3.13e-15 71.6
MsaG004297 AT2G25230.1 34.579 107 61 1 7 104 19 125 3.89e-15 74.3
MsaG004297 AT2G02820.3 37.634 93 49 1 17 100 33 125 2.16e-14 73.9
MsaG004297 AT2G02820.2 37.634 93 49 1 17 100 33 125 3.14e-14 73.9
MsaG004297 AT2G02820.1 37.634 93 49 1 17 100 33 125 3.52e-14 73.9
MsaG004297 AT4G25560.2 65.217 46 16 0 60 105 2 47 3.56e-14 71.2
MsaG004297 AT2G37630.1 29.915 117 70 1 14 118 4 120 3.81e-14 73.2
MsaG004297 AT1G14350.2 36.559 93 50 1 17 100 28 120 2.46e-13 71.2
MsaG004297 AT1G14350.1 36.559 93 50 1 17 100 28 120 2.46e-13 71.2
MsaG004297 AT5G40430.1 33.019 106 63 2 7 104 47 152 7.83e-13 68.2
MsaG004297 AT5G59780.1 56.522 46 20 0 60 105 1 46 2.99e-12 64.7
MsaG004297 AT3G46130.2 56.522 46 20 0 60 105 1 46 8.73e-12 63.9

Find 75 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAGAATGGTCTTTGAATA+TGG 0.209366 1:+68007059 MsaT004297.1:CDS
GTTTAGATTTGGATGATAAA+TGG 0.236357 1:+68007082 MsaT004297.1:CDS
GGAAGGTGATAGTAAGAGTT+TGG 0.236899 1:+68007200 MsaT004297.1:CDS
AGACAGTCTTAAATATAATT+TGG 0.237068 1:+68006981 MsaT004297.1:CDS
TTTGAATATGGGTTTAGATT+TGG 0.276771 1:+68007071 MsaT004297.1:CDS
GAATTATGTGACGACATCTT+AGG 0.277715 1:+68006778 MsaT004297.1:CDS
GTGTTGATGATAATAGTAAT+AGG 0.294687 1:+68007130 MsaT004297.1:CDS
GTTTGGTTCACACTACTTTC+GGG 0.297201 1:-68007018 None:intergenic
GGTTTGGTTCACACTACTTT+CGG 0.304715 1:-68007019 None:intergenic
GTACGTGGAATTTGAACTTC+TGG 0.344780 1:-68006667 None:intergenic
TCCACACTACTTATGGTAAC+AGG 0.346473 1:+68003057 MsaT004297.1:CDS
ATTTCATTGTCCGTTCTTCC+TGG 0.346810 1:-68006451 None:intergenic
GACAATGGAAAATTGTTTGC+TGG 0.348197 1:+68006867 MsaT004297.1:CDS
AAGTCAATGGAGAAGGTTCT+TGG 0.351813 1:+68002248 MsaT004297.1:CDS
ATTTGGATGATAAATGGAAT+TGG 0.354111 1:+68007088 MsaT004297.1:CDS
AACAAAATGATTTGATTGCT+TGG 0.355944 1:+68007241 MsaT004297.1:CDS
TCCACTTTCACCGTTATTTG+AGG 0.382015 1:-68007040 None:intergenic
GTGAAGCTCCACACTACTTA+TGG 0.384648 1:+68003050 MsaT004297.1:CDS
TTTGGATGATAAATGGAATT+GGG 0.393935 1:+68007089 MsaT004297.1:CDS
AAGACTGTCTCCATCATCAT+TGG 0.394370 1:-68006968 None:intergenic
GGACGAACATCCATGATCTT+TGG 0.402215 1:-68006544 None:intergenic
TTTCACCGTTATTTGAGGTT+TGG 0.409041 1:-68007035 None:intergenic
GGAGAATGGTCTTTGAATAT+GGG 0.410310 1:+68007060 MsaT004297.1:CDS
TCAAAATACATTCAAGTCAA+TGG 0.412303 1:+68002235 MsaT004297.1:CDS
GTGAGAAAGTAGGGCTGAAA+AGG 0.422924 1:+68002179 MsaT004297.1:CDS
TAGGGCTGAAAAGGGGTAGA+TGG 0.426871 1:+68002188 MsaT004297.1:CDS
AAGTCAAGAGAGAGAAATGA+TGG 0.429496 1:+68006915 MsaT004297.1:CDS
TGGCAAGTGGCTAGCTATCA+TGG 0.430055 1:-68006431 None:intergenic
CTCCTTGTTGTGAGAAAGTA+GGG 0.452955 1:+68002170 MsaT004297.1:CDS
AATTATGTGACGACATCTTA+GGG 0.454312 1:+68006779 MsaT004297.1:CDS
GGTTGTGTGAAGATGATGAT+TGG 0.456468 1:+68007178 MsaT004297.1:CDS
GAAGGTGATAGTAAGAGTTT+GGG 0.457441 1:+68007201 MsaT004297.1:CDS
TGAGAAAGTAGGGCTGAAAA+GGG 0.462843 1:+68002180 MsaT004297.1:CDS
TGTTGATGATAATAGTAATA+GGG 0.462900 1:+68007131 MsaT004297.1:CDS
AACTATAGAGCCAAAGATCA+TGG 0.469285 1:+68006534 MsaT004297.1:CDS
GAAAGAACAACCAATGATGA+TGG 0.472679 1:+68006958 MsaT004297.1:CDS
ACCTCAAATAACGGTGAAAG+TGG 0.473918 1:+68007039 MsaT004297.1:CDS
GAGAGAGAAATGATGGGTGA+TGG 0.498146 1:+68006922 MsaT004297.1:CDS
ATGTGGTAAAACAAGTCGTT+GGG 0.503146 1:+68006579 MsaT004297.1:CDS
GTTGTGTGAAGATGATGATT+GGG 0.508074 1:+68007179 MsaT004297.1:CDS
TTGAGAACTGACCTCAAAAG+AGG 0.515320 1:+68002996 MsaT004297.1:CDS
ATGATAGCTAGCCACTTGCC+AGG 0.516667 1:+68006433 MsaT004297.1:CDS
GGAAGAGTTGTAGACTAAGA+TGG 0.530001 1:+68002964 MsaT004297.1:CDS
GATCTTTGGCTCTATAGTTG+TGG 0.535260 1:-68006530 None:intergenic
TGCTGAGGTGAGAATTCCAA+TGG 0.535972 1:-68006480 None:intergenic
ACTCCTTGTTGTGAGAAAGT+AGG 0.539369 1:+68002169 MsaT004297.1:CDS
TTACCACATTTACGCTTAGG+AGG 0.541585 1:-68006565 None:intergenic
GTGAACCAAACCTCAAATAA+CGG 0.548903 1:+68007030 MsaT004297.1:CDS
AGGAAACATATCTGCTCAAG+AGG 0.548913 1:+68003016 MsaT004297.1:CDS
AATGTGGTAAAACAAGTCGT+TGG 0.554279 1:+68006578 MsaT004297.1:CDS
TACATTCAAGTCAATGGAGA+AGG 0.566462 1:+68002241 MsaT004297.1:CDS
ATGACATTAATGAAGACAGT+GGG 0.566755 1:+68006818 MsaT004297.1:CDS
AGAGAAATGATGGGTGATGG+AGG 0.569392 1:+68006925 MsaT004297.1:CDS
TGTCCGTTCTTCCTGGCAAG+TGG 0.570131 1:-68006444 None:intergenic
TAGCCACTTGCCAGGAAGAA+CGG 0.570228 1:+68006441 MsaT004297.1:CDS
ATGGAATTGGGAGAGTGTGA+TGG 0.574714 1:+68007101 MsaT004297.1:CDS
AATTGTTTGCTGGAAACAAG+TGG 0.575262 1:+68006877 MsaT004297.1:CDS
ATAACGGTGAAAGTGGAGAA+TGG 0.577565 1:+68007046 MsaT004297.1:CDS
AGTCAAGAGAGAGAAATGAT+GGG 0.595941 1:+68006916 MsaT004297.1:CDS
TTTGGTTCACACTACTTTCG+GGG 0.604186 1:-68007017 None:intergenic
CAATCTAGTGAAGGAGTACG+TGG 0.611516 1:-68006682 None:intergenic
AAGTACTCATGTCAAGACAA+TGG 0.614680 1:+68006852 MsaT004297.1:CDS
TCAATGGAGAAGGTTCTTGG+AGG 0.615802 1:+68002251 MsaT004297.1:CDS
AGCCCTACTTTCTCACAACA+AGG 0.617633 1:-68002172 None:intergenic
ATTGTTTGCTGGAAACAAGT+GGG 0.617843 1:+68006878 MsaT004297.1:CDS
CGTCCTCCTAAGCGTAAATG+TGG 0.619864 1:+68006562 MsaT004297.1:CDS
ACCTGTTACCATAAGTAGTG+TGG 0.624649 1:-68003058 None:intergenic
GAGAAAGTAGGGCTGAAAAG+GGG 0.627925 1:+68002181 MsaT004297.1:CDS
GAAAATAATTGATGACGTGG+AGG 0.627952 1:+68006720 MsaT004297.1:CDS
ACAACTTCACAATCTAGTGA+AGG 0.654135 1:-68006691 None:intergenic
AGAGAAAATAATTGATGACG+TGG 0.669316 1:+68006717 MsaT004297.1:CDS
GATGACATTAATGAAGACAG+TGG 0.688798 1:+68006817 MsaT004297.1:CDS
AGTAGTGTGGAGCTTCACAA+TGG 0.695094 1:-68003045 None:intergenic
TGTGAAGATGATGATTGGGA+AGG 0.699680 1:+68007183 MsaT004297.1:CDS
TGACATTAATGAAGACAGTG+GGG 0.734598 1:+68006819 MsaT004297.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 68002160 68007275 68002160 ID=MsaG004297
Chr1 mRNA 68002160 68007275 68002160 ID=MsaT004297.1;Parent=MsaG004297
Chr1 exon 68002160 68002272 68002160 ID=MsaT004297.1.exon1;Parent=MsaT004297.1
Chr1 CDS 68002160 68002272 68002160 ID=cds.MsaT004297.1;Parent=MsaT004297.1
Chr1 exon 68002959 68003078 68002959 ID=MsaT004297.1.exon2;Parent=MsaT004297.1
Chr1 CDS 68002959 68003078 68002959 ID=cds.MsaT004297.1;Parent=MsaT004297.1
Chr1 exon 68006426 68007275 68006426 ID=MsaT004297.1.exon3;Parent=MsaT004297.1
Chr1 CDS 68006426 68007275 68006426 ID=cds.MsaT004297.1;Parent=MsaT004297.1
Gene Sequence

>MsaT004297.1

ATGGGAAGAACTCCTTGTTGTGAGAAAGTAGGGCTGAAAAGGGGTAGATGGACAACAGAAGAAGATGAGATCTTGTCAAAATACATTCAAGTCAATGGAGAAGGTTCTTGGAGGTGCGGGAAGAGTTGTAGACTAAGATGGATTAACTATTTGAGAACTGACCTCAAAAGAGGAAACATATCTGCTCAAGAGGAAGACACCATTGTGAAGCTCCACACTACTTATGGTAACAGGTGGTCCATGATAGCTAGCCACTTGCCAGGAAGAACGGACAATGAAATTAAAAACCATTGGAATTCTCACCTCAGCAGAAAAATCTACAGTTTCTCAAAAATTTCCACAACTATAGAGCCAAAGATCATGGATGTTCGTCCTCCTAAGCGTAAATGTGGTAAAACAAGTCGTTGGGCCATGAAGAAGAACAAAAGCTACAAAAAACAAACCGTTATTAATACTAAAGAAAATTATATTGAACCAGAAGTTCAAATTCCACGTACTCCTTCACTAGATTGTGAAGTTGTTACAGAGAAAATAATTGATGACGTGGAGGTAAAAACAACACATGATGAGAAAGAAACAACGTATGAATTATGTGACGACATCTTAGGGCTGAGTGAGTTGTTAGATGACATTAATGAAGACAGTGGGGCATTGTGCATAAGTACTCATGTCAAGACAATGGAAAATTGTTTGCTGGAAACAAGTGGGTCTGTTTCAAATTTAAGTCAAGAGAGAGAAATGATGGGTGATGGAGGTGAAGAAAATGAAAGAACAACCAATGATGATGGAGACAGTCTTAAATATAATTTGGTTTCATGTGAAGACCCCGAAAGTAGTGTGAACCAAACCTCAAATAACGGTGAAAGTGGAGAATGGTCTTTGAATATGGGTTTAGATTTGGATGATAAATGGAATTGGGAGAGTGTGATGGAATTTAGTGTTGATGATAATAGTAATAGGGAGCATAAAGATAATCTTTTGAATTGGTTGTGTGAAGATGATGATTGGGAAGGTGATAGTAAGAGTTTGGGAGAGATAGATCCTCAGAAACAAAATGATTTGATTGCTTGGTTTCTCTCTTGA

Protein sequence

>MsaT004297.1

MGRTPCCEKVGLKRGRWTTEEDEILSKYIQVNGEGSWRCGKSCRLRWINYLRTDLKRGNISAQEEDTIVKLHTTYGNRWSMIASHLPGRTDNEIKNHWNSHLSRKIYSFSKISTTIEPKIMDVRPPKRKCGKTSRWAMKKNKSYKKQTVINTKENYIEPEVQIPRTPSLDCEVVTEKIIDDVEVKTTHDEKETTYELCDDILGLSELLDDINEDSGALCISTHVKTMENCLLETSGSVSNLSQEREMMGDGGEENERTTNDDGDSLKYNLVSCEDPESSVNQTSNNGESGEWSLNMGLDLDDKWNWESVMEFSVDDNSNREHKDNLLNWLCEDDDWEGDSKSLGEIDPQKQNDLIAWFLS*