AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG004512

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG004512 MtrunA17_Chr1g0197591 93.548 992 45 2 1 977 63 1050 0.0 1824
MsaG004512 MtrunA17_Chr1g0194741 67.065 586 168 10 1 565 70 651 0.0 746
MsaG004512 MtrunA17_Chr1g0194731 48.246 456 179 11 566 972 1 448 5.83e-108 342
MsaG004512 MtrunA17_Chr8g0343551 90.476 84 6 1 895 976 3 86 3.06e-48 166
MsaG004512 MtrunA17_Chr8g0371601 28.289 608 388 18 10 591 150 735 2.99e-45 177
MsaG004512 MtrunA17_Chr8g0371601 38.462 130 66 4 848 963 1024 1153 5.14e-16 83.6
MsaG004512 MtrunA17_Chr5g0405701 32.105 380 238 7 218 591 408 773 1.27e-42 169
MsaG004512 MtrunA17_Chr5g0405701 38.849 139 62 5 848 963 1045 1183 2.24e-16 84.7
MsaG004512 MtrunA17_Chr8g0377481 28.146 302 186 8 305 591 381 666 3.84e-23 106
MsaG004512 MtrunA17_Chr8g0377481 39.231 130 62 4 853 972 841 963 1.09e-15 82.0
MsaG004512 MtrunA17_Chr4g0018501 78.571 56 12 0 733 788 1 56 1.99e-22 93.2
MsaG004512 MtrunA17_Chr8g0392301 28.090 356 205 13 266 586 335 674 5.22e-21 99.4
MsaG004512 MtrunA17_Chr8g0392301 39.286 140 61 4 850 972 858 990 1.85e-16 84.7
MsaG004512 MtrunA17_Chr3g0136601 29.261 352 203 15 301 619 344 682 5.69e-21 99.4
MsaG004512 MtrunA17_Chr3g0122391 25.698 358 189 12 273 591 399 718 1.41e-20 98.2
MsaG004512 MtrunA17_Chr3g0122391 33.333 192 96 6 790 972 852 1020 6.09e-17 86.3
MsaG004512 MtrunA17_Chr5g0447641 27.108 332 209 13 273 586 576 892 6.40e-20 96.3
MsaG004512 MtrunA17_Chr5g0447641 33.898 177 87 5 819 972 1039 1208 5.01e-15 80.1
MsaG004512 MtrunA17_Chr4g0013831 27.532 316 183 10 306 613 334 611 8.25e-17 85.5
MsaG004512 MtrunA17_Chr1g0150511 26.630 368 200 15 275 586 328 681 3.29e-16 84.0
MsaG004512 MtrunA17_Chr7g0269631 25.914 301 179 9 306 600 334 596 3.27e-14 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG004512 AT2G47430.1 39.474 1064 513 27 4 965 75 1109 0.0 650
MsaG004512 AT2G17820.1 30.833 480 289 13 135 594 309 765 2.32e-44 175
MsaG004512 AT2G17820.1 33.333 159 77 3 843 972 1034 1192 8.88e-16 83.2
MsaG004512 AT2G01830.2 27.824 363 220 11 260 594 414 762 6.09e-26 115
MsaG004512 AT2G01830.2 39.850 133 63 4 850 972 942 1067 1.11e-15 82.8
MsaG004512 AT2G01830.5 28.099 363 219 12 260 594 403 751 6.87e-26 115
MsaG004512 AT2G01830.5 39.850 133 63 4 850 972 931 1056 1.18e-15 82.8
MsaG004512 AT2G01830.1 27.824 363 220 11 260 594 391 739 7.10e-26 115
MsaG004512 AT2G01830.1 39.850 133 63 4 850 972 919 1044 1.16e-15 82.8
MsaG004512 AT2G01830.4 27.824 363 220 11 260 594 391 739 7.10e-26 115
MsaG004512 AT2G01830.4 39.850 133 63 4 850 972 919 1044 1.16e-15 82.8
MsaG004512 AT2G01830.6 27.824 363 220 11 260 594 391 739 7.10e-26 115
MsaG004512 AT2G01830.6 39.850 133 63 4 850 972 919 1044 1.16e-15 82.8
MsaG004512 AT2G01830.3 27.824 363 220 11 260 594 391 739 7.10e-26 115
MsaG004512 AT2G01830.3 39.850 133 63 4 850 972 919 1044 1.16e-15 82.8
MsaG004512 AT1G27320.1 30.449 312 170 10 302 591 436 722 3.32e-25 113
MsaG004512 AT1G27320.1 35.135 148 66 4 853 977 890 1030 1.49e-14 79.0
MsaG004512 AT5G35750.1 26.720 378 229 13 266 619 539 892 5.12e-22 103
MsaG004512 AT5G35750.1 35.862 145 64 3 850 972 1032 1169 2.92e-15 81.3
MsaG004512 AT5G10720.1 25.208 361 209 13 239 586 296 608 3.16e-17 87.4
MsaG004512 AT1G66340.1 24.407 295 175 7 306 594 333 585 1.39e-14 79.0
MsaG004512 AT2G40940.1 25.344 363 217 13 245 597 274 592 1.53e-14 78.6

Find 175 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTATGATTACATCTTAA+TGG 0.112494 1:-70351792 MsaT004512.1:CDS
TGATGTGAGTTACAAGAAAA+TGG 0.185737 1:-70354032 MsaT004512.1:CDS
ATCCTCCATTTGGATTAAAT+TGG 0.203253 1:+70353739 None:intergenic
ATAAAATATTCGCGCGTTAA+AGG 0.206608 1:-70353352 MsaT004512.1:CDS
CACAGACTTGTAATTCTCTT+TGG 0.207678 1:+70353042 None:intergenic
ATGATACTTGTTGCTGTCTT+AGG 0.234879 1:-70353980 MsaT004512.1:CDS
GTCCTAAGCCTGTTCCTTCT+TGG 0.236251 1:+70352981 None:intergenic
TTTAGGAACAAGCACGTATT+TGG 0.256023 1:-70354991 MsaT004512.1:CDS
CTCACATCAAATCCATTTCT+TGG 0.263424 1:+70354046 None:intergenic
ATTTGATTTATCTCATTTCT+TGG 0.272378 1:-70353455 MsaT004512.1:CDS
CTCAAATTGGAAGAGGATTC+TGG 0.275494 1:+70352432 None:intergenic
TAGTTATTGAAGGTCTAAAA+AGG 0.286748 1:-70351829 MsaT004512.1:CDS
TTCAAATGAATTTGCCTCAT+TGG 0.287397 1:-70355138 MsaT004512.1:CDS
ATGTAATCATAAGGAGTATT+AGG 0.299072 1:+70351800 None:intergenic
CAAATGCATTTCTCTCCTTA+TGG 0.302990 1:+70353934 None:intergenic
GAGCTTAGGGATTAAAGTTA+AGG 0.303708 1:-70352535 MsaT004512.1:CDS
CTGCTCCCCGGTTGATATAT+TGG 0.306357 1:-70354778 MsaT004512.1:CDS
ATTGTTTCATGAAACTATTT+TGG 0.307830 1:+70353197 None:intergenic
GAAATTGTGGATAAGAATAT+TGG 0.309223 1:-70352834 MsaT004512.1:CDS
ACAAGATCCTCAGCGTTCTA+TGG 0.309390 1:-70353104 MsaT004512.1:CDS
TGTTATAGCTACGAATATAT+TGG 0.312112 1:-70351906 MsaT004512.1:CDS
GATAAGAATATTGGAGAAAA+AGG 0.314342 1:-70352825 MsaT004512.1:CDS
GTTACTCGTGTCAACCGTTT+AGG 0.332813 1:-70355008 MsaT004512.1:CDS
TCAAATGAATTTGCCTCATT+GGG 0.353206 1:-70355137 MsaT004512.1:CDS
ACAGACTTGTAATTCTCTTT+GGG 0.353928 1:+70353043 None:intergenic
ACTTGGAATTGTGCAGTCTT+TGG 0.354283 1:-70352960 MsaT004512.1:intron
AGTTCCATCCATAAAACTTA+AGG 0.357856 1:+70352359 None:intergenic
TTTGTTGATGATGATTTCAT+TGG 0.365304 1:+70355598 None:intergenic
CTTGTGTACAATCCTCCATT+TGG 0.365899 1:+70353729 None:intergenic
TGAATTTCTCCTTGATGAAC+CGG 0.369576 1:+70352007 None:intergenic
TTTGGTTATTTCTAATGATT+CGG 0.369587 1:-70354922 MsaT004512.1:CDS
AAAAGGTTTATGAAGAGCTT+AGG 0.371564 1:-70352549 MsaT004512.1:CDS
TGCTCCCCGGTTGATATATT+GGG 0.376803 1:-70354777 MsaT004512.1:CDS
CATCCTGTGAATAATGAAAC+TGG 0.381354 1:-70355233 MsaT004512.1:CDS
GGCTTCCAATTTAATCCAAA+TGG 0.382144 1:-70353744 MsaT004512.1:CDS
GATGTGAGTTACAAGAAAAT+GGG 0.384033 1:-70354031 MsaT004512.1:CDS
TCTGCACTTAATGCAATGAT+AGG 0.386989 1:+70351554 None:intergenic
CTTCTTCCTGAGTATGATAA+TGG 0.388629 1:-70352073 MsaT004512.1:CDS
GTCATATCGAAACCATTTCA+TGG 0.389317 1:-70352121 MsaT004512.1:CDS
AGTTCCACCTGGTTCAGAAT+TGG 0.393285 1:-70353765 MsaT004512.1:CDS
GGAATGAGAAGAACTCAAAT+TGG 0.393399 1:+70352419 None:intergenic
TATGTTTCAGGTGTATGTTT+TGG 0.407136 1:-70354074 MsaT004512.1:intron
TCTATTCCCAATATATCAAC+CGG 0.407322 1:+70354771 None:intergenic
ACATTTGAAGTGGATGATAC+AGG 0.407549 1:-70353076 MsaT004512.1:CDS
AGGGATTCAACATATTCGTT+TGG 0.417204 1:-70354940 MsaT004512.1:CDS
ACAAGGGAAGGTCTTGAGTA+TGG 0.419546 1:-70352738 MsaT004512.1:CDS
GATAGATCGACGACGGTGAC+TGG 0.419905 1:-70351527 MsaT004512.1:CDS
AAGCCTGTTCCTTCTTGGAC+AGG 0.421651 1:+70352986 None:intergenic
AACAAACGACTACCATGAAA+TGG 0.425044 1:+70352109 None:intergenic
AAAGGTTTATGAAGAGCTTA+GGG 0.426716 1:-70352548 MsaT004512.1:CDS
GTTCCATCCATAAAACTTAA+GGG 0.428631 1:+70352360 None:intergenic
TTTCAATTAGTGAATGCAAA+TGG 0.449423 1:-70354894 MsaT004512.1:CDS
CTTGTATTGGACCCTTGTAA+TGG 0.450377 1:-70353382 MsaT004512.1:CDS
GCTGTCAAATTTACAAATGA+AGG 0.451337 1:-70353283 MsaT004512.1:CDS
CAGAAGGGTAGCCGTTCAAA+TGG 0.454501 1:-70352465 MsaT004512.1:CDS
AATACGTGCTTGTTCCTAAA+CGG 0.459728 1:+70354994 None:intergenic
CGAGAGATGGAGAAGCCGTT+TGG 0.461495 1:-70351587 MsaT004512.1:CDS
ATCTCATTTCTTGGAAGAAG+TGG 0.466158 1:-70353446 MsaT004512.1:CDS
CATATGATACATGGGACTCA+TGG 0.467130 1:+70352647 None:intergenic
GAAGGAACAGGCTTAGGACT+TGG 0.467616 1:-70352977 MsaT004512.1:CDS
GCTGTAATGCTAGTTATTGA+AGG 0.468260 1:-70351839 MsaT004512.1:CDS
CATCTTGTGGCGATGGAGAA+AGG 0.473755 1:-70353412 MsaT004512.1:CDS
TCCATTAAGATGTAATCATA+AGG 0.475010 1:+70351791 None:intergenic
CGATGTGATAAAGAATTATG+AGG 0.475451 1:-70354871 MsaT004512.1:CDS
AGCGTCGGAGGACTTGTAAA+AGG 0.476600 1:-70352566 MsaT004512.1:CDS
GAAGAGGATTCTGGAGAACT+TGG 0.476809 1:+70352441 None:intergenic
ATTATTGAGCTACTTAATGT+TGG 0.477791 1:+70353229 None:intergenic
TAACGGTTCGAGCGTGGGCT+CGG 0.482627 1:-70353255 MsaT004512.1:CDS
CAGCACATTGAACCTAAAAC+AGG 0.486186 1:+70352800 None:intergenic
ATCTCATACATTGGAATGGA+AGG 0.489108 1:-70355341 MsaT004512.1:CDS
TTGACTCAAATCTCATACAT+TGG 0.489772 1:-70355350 MsaT004512.1:CDS
AATCCTGTCCAAGAAGGAAC+AGG 0.493194 1:-70352989 MsaT004512.1:CDS
ATATGTGCAACTCTAGTCCT+AGG 0.493698 1:-70352629 MsaT004512.1:CDS
TACAAATGAAGGACACATAA+CGG 0.496183 1:-70353272 MsaT004512.1:CDS
TTACATCTTAATGGATTGCC+AGG 0.496712 1:-70351783 MsaT004512.1:intron
GAAAGGTGTAGATCTTGTAT+TGG 0.497817 1:-70353395 MsaT004512.1:CDS
AGAAGTGCGAACGTCATGGC+TGG 0.498478 1:+70353829 None:intergenic
GAAGTGGATGATACAGGAAA+AGG 0.502996 1:-70353070 MsaT004512.1:CDS
ACGTATTTGGCTACAAAAGA+TGG 0.503985 1:-70354978 MsaT004512.1:CDS
GGCTCTATTGAATGTAATGT+TGG 0.504307 1:-70354005 MsaT004512.1:CDS
TTTCCAGTTTCATTATTCAC+AGG 0.508194 1:+70355230 None:intergenic
ATCGTGTCCATTGGTCCACT+TGG 0.508636 1:+70355112 None:intergenic
GCATGGAGATATTGAAATTG+TGG 0.509786 1:-70352847 MsaT004512.1:CDS
GATGGACAAATTCTTGTGGA+AGG 0.513671 1:-70354960 MsaT004512.1:CDS
GTCCAAGAAGGAACAGGCTT+AGG 0.514517 1:-70352983 MsaT004512.1:CDS
TATGGATTTCACATTTGAAG+TGG 0.515917 1:-70353086 MsaT004512.1:CDS
TCTGCTAGAGTCGACAGAAT+AGG 0.516441 1:-70355074 MsaT004512.1:CDS
GTTTCATGAAACAATTGTCA+TGG 0.521499 1:-70353189 MsaT004512.1:CDS
GGTCCACTTGGTTCCCAATG+AGG 0.522253 1:+70355124 None:intergenic
ACGAATATATTGGTTTCACT+TGG 0.522973 1:-70351896 MsaT004512.1:CDS
ACCTCACACTAGAAATTCTC+CGG 0.524132 1:-70352026 MsaT004512.1:CDS
ACTGTCGAGCAATGTGAGAA+TGG 0.524357 1:-70351869 MsaT004512.1:CDS
CAACAGATGCCGGTGATGGA+TGG 0.525744 1:-70351632 MsaT004512.1:intron
ATAGGAATGCGAACACCAAA+CGG 0.527627 1:+70351572 None:intergenic
AATTCAACAGATGCCGGTGA+TGG 0.528229 1:-70351636 MsaT004512.1:intron
TTATAGATGGTAGAGCCATA+AGG 0.528325 1:-70353949 MsaT004512.1:CDS
ATATCTAATCCGCTGCTCCC+CGG 0.529547 1:-70354790 MsaT004512.1:CDS
TTCGCGCGTTAAAGGCGATA+GGG 0.531813 1:-70353344 MsaT004512.1:CDS
AGAATAGGAGTGATCTCTCT+AGG 0.532552 1:-70355059 MsaT004512.1:CDS
GACGTTCGCACTTCTCTCGC+AGG 0.533286 1:-70353821 MsaT004512.1:CDS
ACACGGGATGCCTCGAGCCT+AGG 0.535731 1:+70352612 None:intergenic
ACTCTTCTATCAGCACAAGT+TGG 0.535758 1:-70355181 MsaT004512.1:CDS
CAGGAAGAAGCATTATGACT+TGG 0.536418 1:+70352086 None:intergenic
TTGTAGGTACGTTTGATGCA+TGG 0.537220 1:-70352864 MsaT004512.1:intron
AGAAGAACTCAAATTGGAAG+AGG 0.537572 1:+70352425 None:intergenic
ATCGACGACGGTGACTGGAA+TGG 0.539077 1:-70351522 MsaT004512.1:CDS
TTCCAATTTAATCCAAATGG+AGG 0.540948 1:-70353741 MsaT004512.1:CDS
GTCATGGCTGGCGCTAGCAA+CGG 0.541149 1:+70353841 None:intergenic
GCCTCAAATCCATCCATCAC+CGG 0.541835 1:+70351623 None:intergenic
ATGGACAAATTCTTGTGGAA+GGG 0.543331 1:-70354959 MsaT004512.1:CDS
TCAAATCTCATACATTGGAA+TGG 0.544839 1:-70355345 MsaT004512.1:CDS
CAGTTTCATTATTCACAGGA+TGG 0.545697 1:+70355234 None:intergenic
TTTCTCTGATATTGAAACCA+AGG 0.546211 1:-70355530 MsaT004512.1:intron
ATTGTCATCGATGCAAATGC+GGG 0.546469 1:-70352276 MsaT004512.1:CDS
AGAAAATGAATTATGAGATG+TGG 0.547864 1:+70352398 None:intergenic
GCCGGTGATGGATGGATTTG+AGG 0.548468 1:-70351624 MsaT004512.1:CDS
TCGCGCGTTAAAGGCGATAG+GGG 0.549415 1:-70353343 MsaT004512.1:CDS
ATTGTATGCAAATTCAAGAC+AGG 0.549906 1:-70352228 MsaT004512.1:CDS
GACACATAACGGTTCGAGCG+TGG 0.553377 1:-70353261 MsaT004512.1:CDS
TTTATAACAGAACCATTACA+AGG 0.553983 1:+70353370 None:intergenic
AGTATGATAATGGTAGTGTT+TGG 0.554698 1:-70352063 MsaT004512.1:CDS
GATTGTACACAAGACTTGCT+AGG 0.555976 1:-70353719 MsaT004512.1:intron
AGAGTTGCACATATGATACA+TGG 0.556428 1:+70352638 None:intergenic
TATATACCATCTTGTGGCGA+TGG 0.557526 1:-70353419 MsaT004512.1:CDS
TTGGGAACCAAGTGGACCAA+TGG 0.558410 1:-70355119 MsaT004512.1:CDS
TTAACTGTTTAAGATTCTGA+CGG 0.563333 1:+70351454 None:intergenic
ACCGGAGAATTTCTAGTGTG+AGG 0.564587 1:+70352025 None:intergenic
AAACAAAAGATCGTGTCCAT+TGG 0.566927 1:+70355103 None:intergenic
ACACATAACGGTTCGAGCGT+GGG 0.571601 1:-70353260 MsaT004512.1:CDS
GAGAACTTGGTCCATTTGAA+CGG 0.571693 1:+70352454 None:intergenic
GAAACTAATCCTGTCCAAGA+AGG 0.574727 1:-70352995 MsaT004512.1:CDS
AGAAATTCTCCGGTTCATCA+AGG 0.576300 1:-70352016 MsaT004512.1:CDS
ACTTGACACAAGCAAAATTG+AGG 0.578960 1:-70353506 MsaT004512.1:CDS
TTGGAAATGTGGAGCGTCGG+AGG 0.583114 1:-70352578 MsaT004512.1:CDS
TGTGAATAATGAAACTGGAA+AGG 0.585630 1:-70355228 MsaT004512.1:CDS
GGCTGGCGCTAGCAACGGCG+AGG 0.586025 1:+70353846 None:intergenic
AAAAGATGGACAAATTCTTG+TGG 0.588307 1:-70354964 MsaT004512.1:CDS
TCATCTAAGTTAGTTCCACC+TGG 0.588855 1:-70353776 MsaT004512.1:CDS
CTTTCTCCATCGCCACAAGA+TGG 0.589569 1:+70353413 None:intergenic
CGAGAGAAGTGCGAACGTCA+TGG 0.591973 1:+70353825 None:intergenic
TCAAATGCTTCAAATAACAA+TGG 0.593865 1:+70355386 None:intergenic
TCTAGAGGAGATCAAACAGA+AGG 0.595447 1:-70352481 MsaT004512.1:CDS
ACTACGTTACAAGCGTTGAA+AGG 0.599124 1:+70352205 None:intergenic
GAGTTACAAGAAAATGGGAT+TGG 0.599261 1:-70354026 MsaT004512.1:CDS
ACACTACCATTATCATACTC+AGG 0.600924 1:+70352067 None:intergenic
AGATCTGATTGATACTCTAG+AGG 0.604568 1:-70352496 MsaT004512.1:CDS
TCATTGGAAATGTGGAGCGT+CGG 0.606149 1:-70352581 MsaT004512.1:CDS
TCCAATGAAAAGAACAACAC+GGG 0.606205 1:+70352596 None:intergenic
ATATATCAACCGGGGAGCAG+CGG 0.608109 1:+70354781 None:intergenic
CTATTCCCAATATATCAACC+GGG 0.609652 1:+70354772 None:intergenic
TTGGAAGCCAATTCTGAACC+AGG 0.614868 1:+70353758 None:intergenic
CTAGAGGAGATCAAACAGAA+GGG 0.615621 1:-70352480 MsaT004512.1:CDS
TGGATGGATTTGAGGCAACA+AGG 0.618015 1:-70351616 MsaT004512.1:CDS
TGAGGGCACTGTCTCATGCA+AGG 0.619707 1:-70354853 MsaT004512.1:CDS
GGTTGATATATACCATCTTG+TGG 0.620294 1:-70353425 MsaT004512.1:CDS
GATTGTCATCGATGCAAATG+CGG 0.633870 1:-70352277 MsaT004512.1:CDS
AACAAGGCGGATACGAGAGA+TGG 0.637586 1:-70351600 MsaT004512.1:CDS
CAACTCTAGTCCTAGGCTCG+AGG 0.638163 1:-70352622 MsaT004512.1:CDS
GATGTGATAAAGAATTATGA+GGG 0.640497 1:-70354870 MsaT004512.1:CDS
ACTAGAACTAGTAGCATGAG+TGG 0.643851 1:+70352683 None:intergenic
TTGCCTCATTGGGAACCAAG+TGG 0.650600 1:-70355127 MsaT004512.1:CDS
ATTCGCGCGTTAAAGGCGAT+AGG 0.650793 1:-70353345 MsaT004512.1:CDS
AGTAACAGTACTCAAGCTCG+AGG 0.651523 1:-70352711 MsaT004512.1:CDS
GACACAAGCAAAATTGAGGT+AGG 0.651627 1:-70353502 MsaT004512.1:CDS
TTATAACAGAACCATTACAA+GGG 0.656687 1:+70353371 None:intergenic
GAGTTGCACATATGATACAT+GGG 0.668509 1:+70352639 None:intergenic
GTGCTGCTCAGTTTATGTGA+TGG 0.675208 1:-70352783 MsaT004512.1:CDS
TATGAGATTTGAGTCAAGTG+AGG 0.675699 1:+70355356 None:intergenic
TTCCAATGAAAAGAACAACA+CGG 0.680092 1:+70352595 None:intergenic
GTAACAGTACTCAAGCTCGA+GGG 0.683337 1:-70352710 MsaT004512.1:CDS
TATTCCCAATATATCAACCG+GGG 0.695776 1:+70354773 None:intergenic
GTGAAATCCATAGAACGCTG+AGG 0.701211 1:+70353097 None:intergenic
GAAGCCAATTCTGAACCAGG+TGG 0.721697 1:+70353761 None:intergenic
AGATATTGATAGATCGACGA+CGG 0.744930 1:-70351534 MsaT004512.1:CDS
ATGGATTTGAGGCAACAAGG+CGG 0.781069 1:-70351613 MsaT004512.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 70351454 70355617 70351454 ID=MsaG004512
Chr1 mRNA 70351454 70355617 70351454 ID=MsaT004512.1;Parent=MsaG004512
Chr1 exon 70351454 70351648 70351454 ID=MsaT004512.1.exon7;Parent=MsaT004512.1
Chr1 CDS 70351454 70351648 70351454 ID=cds.MsaT004512.1;Parent=MsaT004512.1
Chr1 exon 70351784 70352165 70351784 ID=MsaT004512.1.exon6;Parent=MsaT004512.1
Chr1 CDS 70351784 70352165 70351784 ID=cds.MsaT004512.1;Parent=MsaT004512.1
Chr1 exon 70352210 70352880 70352210 ID=MsaT004512.1.exon5;Parent=MsaT004512.1
Chr1 CDS 70352210 70352880 70352210 ID=cds.MsaT004512.1;Parent=MsaT004512.1
Chr1 exon 70352961 70353544 70352961 ID=MsaT004512.1.exon4;Parent=MsaT004512.1
Chr1 CDS 70352961 70353544 70352961 ID=cds.MsaT004512.1;Parent=MsaT004512.1
Chr1 exon 70353720 70354086 70353720 ID=MsaT004512.1.exon3;Parent=MsaT004512.1
Chr1 CDS 70353720 70354086 70353720 ID=cds.MsaT004512.1;Parent=MsaT004512.1
Chr1 exon 70354767 70355414 70354767 ID=MsaT004512.1.exon2;Parent=MsaT004512.1
Chr1 CDS 70354767 70355414 70354767 ID=cds.MsaT004512.1;Parent=MsaT004512.1
Chr1 exon 70355531 70355617 70355531 ID=MsaT004512.1.exon1;Parent=MsaT004512.1
Chr1 CDS 70355531 70355617 70355531 ID=cds.MsaT004512.1;Parent=MsaT004512.1
Gene Sequence

>MsaT004512.1

ATGAAATCATCATCAACAAATTTAGCAAGATTGTTGACTTCAACACTTGATTCTACTAACATCTCTTTCTCTGATATTGAAACCAAGGTTGCTCCATTGTTATTTGAAGCATTTGAGACAGTTCCTCACTTGACTCAAATCTCATACATTGGAATGGAAGGTCTCTTTTTCTCATATTGCAGTGATCATGATCAAGCTCTAGCAATATACTCTAACTCATCATCAAATAAAATCTTATACTATGTCCATCCTGTGAATAATGAAACTGGAAAGGTTTTTGGAGAAGCTATAATATCAAACTCTTCTATCAGCACAAGTTGGATTAAGAAAGCAGCTAATATTTCAAATGAATTTGCCTCATTGGGAACCAAGTGGACCAATGGACACGATCTTTTGTTTCTAAATTCTGCTAGAGTCGACAGAATAGGAGTGATCTCTCTAGGATTTTCAGCAAAAGCAATAACTGATTCTGTTACTCGTGTCAACCGTTTAGGAACAAGCACGTATTTGGCTACAAAAGATGGACAAATTCTTGTGGAAGGGATTCAACATATTCGTTTGGTTATTTCTAATGATTCGGTTTCATTTCAATTAGTGAATGCAAATGGCGATGTGATAAAGAATTATGAGGGCACTGTCTCATGCAAGGATGAAGCTACTGCGTCTAGTTTGAATATTCAAAATACTCAATATCTAATCCGCTGCTCCCCGGTTGATATATTGGGAATAGAATCTGTGTATGTTTTGGTTGTACCAAGAAATGGATTTGATGTGAGTTACAAGAAAATGGGATTGGCTCTATTGAATGTAATGTTGGTAATGATACTTGTTGCTGTCTTAGGTTTTCTATTTATAGATGGTAGAGCCATAAGGAGAGAAATGCATTTGTGTGCCTCACTTATCAAACAAAAAGAGGCCACTCATCAAGCTGAGCGAAAAAATATGAACAAGAGCCTCGCCGTTGCTAGCGCCAGCCATGACGTTCGCACTTCTCTCGCAGGCATTACTGCCCTCATAAAAATTTCATCTAAGTTAGTTCCACCTGGTTCAGAATTGGCTTCCAATTTAATCCAAATGGAGGATTGTACACAAGACTTGCTAGGACTATTGAACTCTATACTTGACACAAGCAAAATTGAGGTAGGAAAAATGGAACTCGTGGAAGAAGAATTTGATTTATCTCATTTCTTGGAAGAAGTGGTTGATATATACCATCTTGTGGCGATGGAGAAAGGTGTAGATCTTGTATTGGACCCTTGTAATGGTTCTGTTATAAAATATTCGCGCGTTAAAGGCGATAGGGGAAGACTTAAACAAGTTTTATGTAATTTACTGAACAATGCTGTCAAATTTACAAATGAAGGACACATAACGGTTCGAGCGTGGGCTCGGAAGCCAACATTAAGTAGCTCAATAATCAAGACTAACCAAAATAGTTTCATGAAACAATTGTCATGGTTATTTTCTAAGAGAAAAAATAAAGCAGATGAGGACATAGAAAAAACTATGAATTCAATTCAACAAGATCCTCAGCGTTCTATGGATTTCACATTTGAAGTGGATGATACAGGAAAAGGAATTCCCAAAGAGAATTACAAGTCTGTGTTTGAGAATTATGTTCAAGTCAAAGAAACTAATCCTGTCCAAGAAGGAACAGGCTTAGGACTTGGAATTGTGCAGTCTTTGGTACGTTTGATGCATGGAGATATTGAAATTGTGGATAAGAATATTGGAGAAAAAGGAACCTGTTTTAGGTTCAATGTGCTGCTCAGTTTATGTGATGGTGAAACAATGACAGATTTTAGCACAAGGGAAGGTCTTGAGTATGGAACAAGTAACAGTACTCAAGCTCGAGGGAGAACCACTCATGCTACTAGTTCTAGTTCAAACATTTGTTCCATGAGTCCCATGTATCATATGTGCAACTCTAGTCCTAGGCTCGAGGCATCCCGTGTTGTTCTTTTCATTGGAAATGTGGAGCGTCGGAGGACTTGTAAAAGGTTTATGAAGAGCTTAGGGATTAAAGTTAAGGTTGTGAAGTGTCAAAAAGATCTGATTGATACTCTAGAGGAGATCAAACAGAAGGGTAGCCGTTCAAATGGACCAAGTTCTCCAGAATCCTCTTCCAATTTGAGTTCTTCTCATTCCACATCTCATAATTCATTTTCTAGAGCTAAAGGTGTTCCCTTAAGTTTTATGGATGGAACTGAGTATATGTCTCCAGTGTTCAAAAAGACAAATTTTGGAACTGTAGCATGTTTCGTCTTGATTGTCATCGATGCAAATGCGGGATCATCATTTTCTGAACTCTTTGGAATTGTATGCAAATTCAAGACAGGCCTTTCAACGCTTGTAACAATAATTGATCAAAATGACATTGTCATATCGAAACCATTTCATGGTAGTCGTTTGTTCCAAGTCATAATGCTTCTTCCTGAGTATGATAATGGTAGTGTTTGGCAAAGCATTAAGAAACCTCACACTAGAAATTCTCCGGTTCATCAAGGAGAAATTCAAGAATGTGAAGACTCAAGCTGTTACAAACCTTTGCATTGCAAGAAGTTTTTGGTTGTTGAGGATACTAAAATTTTACGTGTTATAGCTACGAATATATTGGTTTCACTTGGAGCGACTGTCGAGCAATGTGAGAATGGCAAAGAAGCTGTAATGCTAGTTATTGAAGGTCTAAAAAGGGATGATCCTAATACTCCTTATGATTACATCTTAATGGATTGCCAGATGCCGGTGATGGATGGATTTGAGGCAACAAGGCGGATACGAGAGATGGAGAAGCCGTTTGGTGTTCGCATTCCTATCATTGCATTAAGTGCAGATATTGATAGATCGACGACGGTGACTGGAATGGACTTTTATATAGAGAAACCACTTAGAAAAGAGCATTTACTTGAAGCCGTCAGAATCTTAAACAGTTAA
Protein sequence

>MsaT004512.1

MKSSSTNLARLLTSTLDSTNISFSDIETKVAPLLFEAFETVPHLTQISYIGMEGLFFSYCSDHDQALAIYSNSSSNKILYYVHPVNNETGKVFGEAIISNSSISTSWIKKAANISNEFASLGTKWTNGHDLLFLNSARVDRIGVISLGFSAKAITDSVTRVNRLGTSTYLATKDGQILVEGIQHIRLVISNDSVSFQLVNANGDVIKNYEGTVSCKDEATASSLNIQNTQYLIRCSPVDILGIESVYVLVVPRNGFDVSYKKMGLALLNVMLVMILVAVLGFLFIDGRAIRREMHLCASLIKQKEATHQAERKNMNKSLAVASASHDVRTSLAGITALIKISSKLVPPGSELASNLIQMEDCTQDLLGLLNSILDTSKIEVGKMELVEEEFDLSHFLEEVVDIYHLVAMEKGVDLVLDPCNGSVIKYSRVKGDRGRLKQVLCNLLNNAVKFTNEGHITVRAWARKPTLSSSIIKTNQNSFMKQLSWLFSKRKNKADEDIEKTMNSIQQDPQRSMDFTFEVDDTGKGIPKENYKSVFENYVQVKETNPVQEGTGLGLGIVQSLVRLMHGDIEIVDKNIGEKGTCFRFNVLLSLCDGETMTDFSTREGLEYGTSNSTQARGRTTHATSSSSNICSMSPMYHMCNSSPRLEASRVVLFIGNVERRRTCKRFMKSLGIKVKVVKCQKDLIDTLEEIKQKGSRSNGPSSPESSSNLSSSHSTSHNSFSRAKGVPLSFMDGTEYMSPVFKKTNFGTVACFVLIVIDANAGSSFSELFGIVCKFKTGLSTLVTIIDQNDIVISKPFHGSRLFQVIMLLPEYDNGSVWQSIKKPHTRNSPVHQGEIQECEDSSCYKPLHCKKFLVVEDTKILRVIATNILVSLGATVEQCENGKEAVMLVIEGLKRDDPNTPYDYILMDCQMPVMDGFEATRRIREMEKPFGVRIPIIALSADIDRSTTVTGMDFYIEKPLRKEHLLEAVRILNS*