AlfalfaGEDB | MsaG004595

M. sativa ssp. caerulea / MsaG004595

KEGG: -
GO: GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009058 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009812 GO:0009813 GO:0009888 GO:0009889 GO:0009965 GO:0010016 GO:0010051 GO:0010087 GO:0010154 GO:0010305 GO:0010468 GO:0010556 GO:0010588 GO:0019219 GO:0019222 GO:0022414 GO:0022622 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0080090 GO:0090698 GO:0099402 GO:0140110 GO:1901576 GO:1903506 GO:1905392 GO:2000112 GO:2001141
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG004595	XP_013469412.1	97.619	294	7	0	1	294	1	294	0.0	606

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG004595	sp\|Q9FX68\|ZWIP6_ARATH	65.447	246	61	5	23	258	12	243	5.24e-107	316

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG004595	tr\|A0A072VZH1\|A0A072VZH1_MEDTR	97.619	294	7	0	1	294	1	294	0.0	606

TFs/TRs:

Gene ID	Type	Classification
MsaG004595	TF	C2H2

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000237	MsaG004595	0.811688	1.060363e-50	1.887076e-48
MsaG000285	MsaG004595	0.817689	5.040257e-52	1.043588e-49
MsaG000419	MsaG004595	0.801310	1.602450e-48	2.231630e-46
MsaG000497	MsaG004595	0.823372	2.534972e-53	6.100560e-51
MsaG000624	MsaG004595	0.813753	3.763922e-51	7.051481e-49
MsaG001169	MsaG004595	0.802794	7.964726e-49	1.147362e-46
MsaG001273	MsaG004595	0.806947	1.089997e-49	1.729769e-47
MsaG001438	MsaG004595	0.811025	1.474683e-50	2.582097e-48
MsaG001558	MsaG004595	0.801065	1.797195e-48	2.488972e-46
MsaG001724	MsaG004595	0.821162	8.211381e-53	1.862447e-50
MsaG001911	MsaG004595	0.808086	6.262662e-50	1.021293e-47
MsaG002052	MsaG004595	0.815208	1.800199e-51	3.498316e-49
MsaG002353	MsaG004595	0.883322	1.058490e-70	2.235254e-67
MsaG002647	MsaG004595	0.837832	7.563419e-57	2.759563e-54
MsaG002718	MsaG004595	0.800892	1.949521e-48	2.689412e-46
MsaG003190	MsaG004595	0.822851	3.349612e-53	7.948078e-51
MsaG003291	MsaG004595	0.837643	8.453298e-57	3.066469e-54
MsaG003503	MsaG004595	0.822158	4.845046e-53	1.128376e-50
MsaG003632	MsaG004595	0.827708	2.406631e-54	6.527672e-52
MsaG003768	MsaG004595	0.807090	1.016940e-49	1.619302e-47
MsaG003795	MsaG004595	0.841821	6.995219e-58	2.892299e-55
MsaG004146	MsaG004595	0.804296	3.899925e-49	5.817049e-47
MsaG004226	MsaG004595	0.828024	2.022145e-54	5.533632e-52
MsaG004185	MsaG004595	0.805804	1.893628e-49	2.925098e-47
MsaG004273	MsaG004595	0.835148	3.618946e-56	1.217601e-53
MsaG004290	MsaG004595	0.801505	1.462407e-48	2.045627e-46
MsaG004538	MsaG004595	0.813565	4.136535e-51	7.713400e-49
MsaG004595	MsaG004866	0.803221	6.507056e-49	9.466697e-47
MsaG004595	MsaG005003	0.802084	1.113523e-48	1.578275e-46
MsaG004595	MsaG005092	0.876061	3.914089e-68	5.901298e-65
MsaG004595	MsaG005055	0.836279	1.877744e-56	6.535988e-54
MsaG004595	MsaG005058	0.838591	4.832886e-57	1.805350e-54
MsaG004595	MsaG005104	0.800163	2.740077e-48	3.718322e-46
MsaG004595	MsaG005156	0.802800	7.940690e-49	1.144065e-46
MsaG004595	MsaG005393	0.832515	1.636516e-55	5.093422e-53
MsaG004595	MsaG005406	0.831183	3.476744e-55	1.040879e-52
MsaG004595	MsaG005827	0.831117	3.609236e-55	1.078496e-52
MsaG004595	MsaG005880	0.856334	6.699350e-62	4.543333e-59
MsaG004595	MsaG005891	0.802876	7.660107e-49	1.105571e-46
MsaG004595	MsaG006020	0.813835	3.610575e-51	6.778472e-49
MsaG004595	MsaG006151	0.832022	2.165203e-55	6.643431e-53
MsaG004595	MsaG006120	0.807915	6.810059e-50	1.106007e-47
MsaG004595	MsaG006225	0.812667	6.498328e-51	1.184783e-48
MsaG004595	MsaG006257	0.809331	3.405028e-50	5.721330e-48
MsaG004595	MsaG006351	0.825301	8.965783e-54	2.274077e-51
MsaG004595	MsaG006422	0.814283	2.879100e-51	5.466043e-49
MsaG004595	MsaG006558	0.824962	1.077346e-53	2.707267e-51
MsaG004595	MsaG006610	0.824756	1.204044e-53	3.008641e-51
MsaG004595	MsaG006623	0.800429	2.419941e-48	3.303795e-46
MsaG004595	MsaG006683	0.831046	3.754804e-55	1.119740e-52
MsaG004595	MsaG006742	0.856549	5.798621e-62	3.963489e-59
MsaG004595	MsaG006755	0.800213	2.676374e-48	3.635962e-46
MsaG004595	MsaG006855	0.831384	3.105199e-55	9.351073e-53
MsaG004595	MsaG006884	0.805367	2.335609e-49	3.571237e-47
MsaG004595	MsaG006943	0.818000	4.290960e-52	8.956603e-50
MsaG004595	MsaG007122	0.818369	3.543726e-52	7.467376e-50
MsaG004595	MsaG007131	0.805811	1.887233e-49	2.915702e-47
MsaG004595	MsaG007431	0.843380	2.708194e-58	1.177195e-55
MsaG004595	MsaG007565	0.834945	4.071057e-56	1.361369e-53
MsaG004595	MsaG008112	0.806847	1.143916e-49	1.811062e-47
MsaG004595	MsaG008250	0.816788	8.021818e-52	1.622862e-49
MsaG004595	MsaG008434	0.839343	3.092678e-57	1.182577e-54
MsaG004595	MsaG008634	0.803805	4.929331e-49	7.268891e-47
MsaG004595	MsaG009015	0.804172	4.138043e-49	6.154325e-47
MsaG004595	MsaG009010	0.804281	3.928848e-49	5.858072e-47
MsaG004595	MsaG009140	0.810121	2.307068e-50	3.951403e-48
MsaG004595	MsaG009206	0.820892	9.466523e-53	2.131776e-50
MsaG004595	MsaG009456	0.821429	7.130579e-53	1.628670e-50
MsaG004595	MsaG009639	0.809812	2.687217e-50	4.568248e-48
MsaG004595	MsaG010104	0.825266	9.138441e-54	2.315630e-51
MsaG004595	MsaG010112	0.807706	7.539455e-50	1.218321e-47
MsaG004595	MsaG010278	0.805975	1.743745e-49	2.704404e-47
MsaG004595	MsaG010768	0.825232	9.307349e-54	2.356215e-51
MsaG004595	MsaG011018	0.801449	1.501292e-48	2.097400e-46
MsaG004595	MsaG011248	0.844672	1.224249e-58	5.549690e-56
MsaG004595	MsaG011613	0.810270	2.143521e-50	3.684643e-48
MsaG004595	MsaG011833	0.824016	1.794425e-53	4.394465e-51
MsaG004595	MsaG011951	0.811969	9.216445e-51	1.651596e-48
MsaG004595	MsaG011952	0.808980	4.044824e-50	6.739582e-48
MsaG004595	MsaG012160	0.810859	1.601365e-50	2.792524e-48
MsaG004595	MsaG012287	0.832393	1.754385e-55	5.440729e-53
MsaG004595	MsaG012290	0.841647	7.770133e-58	3.195020e-55
MsaG004595	MsaG012467	0.807747	7.388572e-50	1.195104e-47
MsaG004595	MsaG012496	0.847680	1.874940e-59	9.393265e-57
MsaG004595	MsaG012778	0.839791	2.368594e-57	9.185902e-55
MsaG004595	MsaG014542	0.802323	9.948911e-49	1.417903e-46
MsaG004595	MsaG015092	0.824538	1.354752e-53	3.365169e-51
MsaG004595	MsaG015809	0.802849	7.758686e-49	1.119090e-46
MsaG004595	MsaG015851	0.826545	4.556463e-54	1.196303e-51
MsaG004595	MsaG016291	0.824766	1.197828e-53	2.993817e-51
MsaG004595	MsaG016421	0.803720	5.133397e-49	7.554994e-47
MsaG004595	MsaG017057	0.851368	1.774462e-60	1.008171e-57
MsaG004595	MsaG017105	0.815330	1.691744e-51	3.297690e-49
MsaG004595	MsaG017150	0.851931	1.231472e-60	7.136803e-58
MsaG004595	MsaG017259	0.821246	7.856311e-53	1.785812e-50
MsaG004595	MsaG017690	0.800923	1.921168e-48	2.652167e-46
MsaG004595	MsaG018135	0.812481	7.133644e-51	1.294662e-48
MsaG004595	MsaG018229	0.837237	1.072721e-56	3.843358e-54
MsaG004595	MsaG018290	0.810851	1.607464e-50	2.802642e-48
MsaG004595	MsaG018351	0.812407	7.400908e-51	1.340712e-48
MsaG004595	MsaG018577	0.816083	1.151630e-51	2.288114e-49
MsaG004595	MsaG018655	0.814714	2.313832e-51	4.440585e-49
MsaG004595	MsaG018786	0.803683	5.223165e-49	7.680589e-47
MsaG004595	MsaG018793	0.811299	1.286552e-50	2.267921e-48
MsaG004595	MsaG018913	0.845252	8.554834e-59	3.952438e-56
MsaG004595	MsaG018975	0.841880	6.748205e-58	2.795662e-55
MsaG004595	MsaG019092	0.809105	3.805017e-50	6.359159e-48
MsaG004595	MsaG019206	0.801113	1.757829e-48	2.437099e-46
MsaG004595	MsaG019525	0.840679	1.391751e-57	5.550121e-55
MsaG004595	MsaG019590	0.811806	9.993712e-51	1.783757e-48
MsaG004595	MsaG019657	0.839334	3.109171e-57	1.188546e-54
MsaG004595	MsaG019913	0.815813	1.322284e-51	2.609243e-49
MsaG004595	MsaG019906	0.804170	4.141827e-49	6.159649e-47
MsaG004595	MsaG019935	0.846795	3.269782e-59	1.590233e-56
MsaG004595	MsaG020353	0.853394	4.729151e-61	2.885376e-58
MsaG004595	MsaG020346	0.808870	4.269281e-50	7.094867e-48
MsaG004595	MsaG020338	0.812531	6.955594e-51	1.263929e-48
MsaG004595	MsaG020402	0.800510	2.329997e-48	3.186798e-46
MsaG004595	MsaG020415	0.827733	2.374683e-54	6.445462e-52
MsaG004595	MsaG020420	0.831805	2.448312e-55	7.464864e-53
MsaG004595	MsaG020467	0.847815	1.721396e-59	8.664281e-57
MsaG004595	MsaG020574	0.845000	1.000154e-58	4.583503e-56
MsaG004595	MsaG020616	0.821949	5.413447e-53	1.253689e-50
MsaG004595	MsaG020718	0.850696	2.740454e-60	1.521353e-57
MsaG004595	MsaG020754	0.812383	7.493773e-51	1.356692e-48
MsaG004595	MsaG021022	0.804131	4.220789e-49	6.271336e-47
MsaG004595	MsaG022116	0.847771	1.769954e-59	8.895116e-57
MsaG004595	MsaG022547	0.812958	5.615407e-51	1.031274e-48
MsaG004595	MsaG022746	0.830847	4.200009e-55	1.245349e-52
MsaG004595	MsaG022895	0.829602	8.429581e-55	2.412040e-52
MsaG004595	MsaG023119	0.829352	9.690864e-55	2.752916e-52
MsaG004595	MsaG023704	0.813954	3.399182e-51	6.400594e-49
MsaG004595	MsaG024008	0.833221	1.094802e-55	3.478788e-53
MsaG004595	MsaG024546	0.833005	1.238712e-55	3.910718e-53
MsaG004595	MsaG025083	0.817363	5.963608e-52	1.224519e-49
MsaG004595	MsaG025289	0.803022	7.147439e-49	1.035085e-46
MsaG004595	MsaG026849	0.843750	2.159255e-58	9.497577e-56
MsaG004595	MsaG026929	0.809541	3.069708e-50	5.184609e-48
MsaG004595	MsaG026963	0.816636	8.672471e-52	1.747598e-49
MsaG004595	MsaG026975	0.814922	2.082279e-51	4.017269e-49
MsaG004595	MsaG027026	0.806633	1.268783e-49	1.998764e-47
MsaG004595	MsaG027195	0.834970	4.010702e-56	1.342221e-53
MsaG004595	MsaG027307	0.869147	7.802394e-66	8.724426e-63
MsaG004595	MsaG027383	0.811294	1.289826e-50	2.273406e-48
MsaG004595	MsaG027775	0.879012	3.705668e-69	6.390283e-66
MsaG004595	MsaG027741	0.831930	2.280100e-55	6.977473e-53
MsaG004595	MsaG027752	0.851594	1.533136e-60	8.778756e-58
MsaG004595	MsaG027899	0.838565	4.906895e-57	1.831497e-54
MsaG004595	MsaG027992	0.820923	9.314709e-53	2.099342e-50
MsaG004595	MsaG028043	0.804542	3.468249e-49	5.202534e-47
MsaG004595	MsaG028109	0.852394	9.110875e-61	5.366347e-58
MsaG004595	MsaG028288	0.831799	2.456283e-55	7.487962e-53
MsaG004595	MsaG028634	0.802814	7.888063e-49	1.136860e-46
MsaG004595	MsaG028825	0.815454	1.587680e-51	3.104622e-49
MsaG004595	MsaG028990	0.834495	5.275802e-56	1.740728e-53
MsaG004595	MsaG029110	0.860235	4.676051e-63	3.668971e-60
MsaG004595	MsaG029424	0.800238	2.645467e-48	3.596059e-46
MsaG004595	MsaG029470	0.821666	6.289836e-53	1.445752e-50
MsaG004595	MsaG029482	0.827240	3.114136e-54	8.336142e-52
MsaG004595	MsaG029792	0.852384	9.168027e-61	5.398183e-58
MsaG004595	MsaG030045	0.812158	8.383086e-51	1.509185e-48
MsaG004595	MsaG030070	0.827909	2.154884e-54	5.877850e-52
MsaG004595	MsaG031427	0.801259	1.641325e-48	2.283108e-46
MsaG004595	MsaG031480	0.810711	1.722899e-50	2.993629e-48
MsaG004595	MsaG031994	0.830134	6.265419e-55	1.820226e-52
MsaG004595	MsaG032046	0.809646	2.916335e-50	4.937829e-48
MsaG004595	MsaG032272	0.825624	7.523436e-54	1.925318e-51
MsaG004595	MsaG032228	0.827468	2.746554e-54	7.399485e-52
MsaG004595	MsaG033263	0.820183	1.374621e-52	3.038138e-50
MsaG004595	MsaG033593	0.809997	2.452843e-50	4.188461e-48
MsaG004595	MsaG033646	0.803584	5.475684e-49	8.033317e-47
MsaG004595	MsaG033688	0.839890	2.231837e-57	8.682955e-55
MsaG004595	MsaG033744	0.820004	1.510354e-52	3.322238e-50
MsaG004595	MsaG034285	0.831523	2.870613e-55	8.680081e-53
MsaG004595	MsaG034501	0.803585	5.474022e-49	8.031030e-47
MsaG004595	MsaG034861	0.840756	1.329147e-57	5.313055e-55
MsaG004595	MsaG034946	0.825028	1.039671e-53	2.617335e-51
MsaG004595	MsaG035001	0.855258	1.377132e-61	8.980064e-59
MsaG004595	MsaG035198	0.803729	5.110873e-49	7.523544e-47
MsaG004595	MsaG035947	0.806209	1.557824e-49	2.429637e-47
MsaG004595	MsaG039758	0.806806	1.166791e-49	1.845527e-47
MsaG004595	MsaG040045	0.807724	7.474089e-50	1.208276e-47
MsaG004595	MsaG040095	0.863011	6.694321e-64	5.845476e-61
MsaG004595	MsaG040379	0.886303	8.326304e-72	2.033351e-68
MsaG004595	MsaG040474	0.813185	5.008943e-51	9.251544e-49
MsaG004595	MsaG040921	0.807528	8.218447e-50	1.322380e-47
MsaG004595	MsaG042579	0.835396	3.135484e-56	1.062777e-53
MsaG004595	MsaG042717	0.824023	1.787658e-53	4.378760e-51
MsaG004595	MsaG043063	0.821935	5.452122e-53	1.262193e-50
MsaG004595	MsaG043350	0.801609	1.392594e-48	1.952611e-46
MsaG004595	MsaG043804	0.822871	3.314394e-53	7.868856e-51
MsaG004595	MsaG044110	0.810658	1.768426e-50	3.068809e-48
MsaG004595	MsaG044106	0.813339	4.635602e-51	8.594834e-49
MsaG004595	MsaG044319	0.815676	1.417621e-51	2.787740e-49
MsaG004595	MsaG044934	0.825023	1.042190e-53	2.623371e-51
MsaG004595	MsaG044971	0.817715	4.974124e-52	1.030575e-49
MsaG004595	MsaG044957	0.813702	3.860990e-51	7.224061e-49
MsaG004595	MsaG045200	0.824235	1.594879e-53	3.928987e-51
MsaG004595	MsaG045251	0.832763	1.421814e-55	4.457300e-53
MsaG004595	MsaG045262	0.828016	2.031785e-54	5.558604e-52
MsaG004595	MsaG045392	0.830572	4.900199e-55	1.441495e-52
MsaG004595	MsaG045568	0.863290	5.492865e-64	4.848797e-61
MsaG004595	MsaG045965	0.831104	3.635282e-55	1.085876e-52
MsaG004595	MsaG045997	0.807160	9.828564e-50	1.567641e-47
MsaG004595	MsaG045984	0.833207	1.103618e-55	3.505318e-53
MsaG004595	MsaG046136	0.818895	2.696022e-52	5.759427e-50
MsaG004595	MsaG046247	0.810072	2.363035e-50	4.042487e-48
MsaG004595	MsaG046265	0.832133	2.033093e-55	6.258219e-53
MsaG004595	MsaG046431	0.806670	1.246610e-49	1.965479e-47
MsaG004595	MsaG046439	0.816350	1.004415e-51	2.009291e-49
MsaG004595	MsaG046446	0.805171	2.566899e-49	3.907125e-47
MsaG004595	MsaG046473	0.819075	2.455318e-52	5.270146e-50
MsaG004595	MsaG046498	0.831804	2.449196e-55	7.467452e-53
MsaG004595	MsaG046507	0.822351	4.372693e-53	1.023672e-50
MsaG004595	MsaG046551	0.810650	1.775486e-50	3.080502e-48
MsaG004595	MsaG046930	0.801136	1.738987e-48	2.412250e-46
MsaG004595	MsaG047011	0.804469	3.592149e-49	5.379147e-47
MsaG004595	MsaG047056	0.802691	8.361080e-49	1.201652e-46
MsaG004595	MsaG001564	0.841571	8.132151e-58	3.335979e-55
MsaG004595	MsaG001077	0.829428	9.286141e-55	2.643843e-52
MsaG004595	MsaG001950	0.903140	1.101481e-78	6.787733e-75
MsaG004595	MsaG004537	0.800040	2.901060e-48	3.925994e-46
MsaG004595	MsaG004304	0.810705	1.727635e-50	3.001466e-48
MsaG004595	MsaG011921	0.832167	1.993737e-55	6.142974e-53
MsaG004595	MsaG013873	0.824236	1.593783e-53	3.926412e-51
MsaG004595	MsaG021945	0.827910	2.153367e-54	5.873919e-52
MsaG004595	MsaG018209	0.806804	1.168397e-49	1.847940e-47
MsaG004595	MsaG019592	0.865188	1.414698e-64	1.346768e-61
MsaG004595	MsaG028121	0.819618	1.848539e-52	4.024478e-50
MsaG004595	MsaG027101	0.847536	2.052719e-59	1.023453e-56
MsaG004595	MsaG028127	0.822752	3.530123e-53	8.354177e-51
MsaG004595	MsaG033462	0.819782	1.696923e-52	3.710477e-50
MsaG004595	MsaG032345	0.818002	4.286703e-52	8.948172e-50
MsaG004595	MsaG033077	0.806159	1.595237e-49	2.484970e-47
MsaG004595	MsaG034262	0.873890	2.134321e-67	2.923761e-64
MsaG004595	MsaG030190	0.801902	1.213574e-48	1.712986e-46
MsaG004595	MsaG032408	0.817091	6.863787e-52	1.399502e-49
MsaG004595	MsaG030699	0.803779	4.990572e-49	7.354741e-47
MsaG004595	MsaG033504	0.818290	3.692088e-52	7.764004e-50
MsaG004595	MsaG031222	0.816743	8.208103e-52	1.658646e-49
MsaG004595	MsaG033283	0.807609	7.901818e-50	1.273869e-47
MsaG004595	MsaG036873	0.800375	2.482047e-48	3.384403e-46
MsaG004595	MsaG035285	0.801793	1.277200e-48	1.798305e-46
MsaG004595	MsaG036358	0.839650	2.576621e-57	9.948183e-55
MsaG004595	MsaG036735	0.821628	6.418839e-53	1.473895e-50
MsaG004595	MsaG037879	0.847150	2.617675e-59	1.288352e-56
MsaG004595	MsaG036787	0.836711	1.459062e-56	5.144927e-54
MsaG004595	MsaG037376	0.827696	2.423616e-54	6.571333e-52
MsaG004595	MsaG036473	0.805022	2.756709e-49	4.181600e-47
MsaG004595	MsaG035795	0.827951	2.105377e-54	5.749547e-52
MsaG004595	MsaG036119	0.824596	1.312612e-53	3.265605e-51
MsaG004595	MsaG035299	0.835421	3.090573e-56	1.048379e-53
MsaG004595	MsaG038594	0.803332	6.170936e-49	9.000745e-47
MsaG004595	MsaG042989	0.803238	6.452087e-49	9.390596e-47
MsaG004595	MsaG043129	0.815906	1.260320e-51	2.492905e-49
MsaG004595	MsaG041852	0.835903	2.337411e-56	8.043934e-54

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG004595	MtrunA17_Chr1g0198651	97.595	291	7	0	1	291	1	291	0.0	601
MsaG004595	MtrunA17_Chr5g0422571	62.633	281	90	5	1	275	1	272	1.43e-113	329
MsaG004595	MtrunA17_Chr1g0173841	65.094	212	60	2	75	286	188	385	1.60e-99	297
MsaG004595	MtrunA17_Chr7g0258011	71.809	188	39	2	99	286	173	346	1.70e-99	295
MsaG004595	MtrunA17_Chr2g0328921	71.429	189	40	3	99	286	135	310	1.54e-96	287
MsaG004595	MtrunA17_Chr8g0352011	69.730	185	42	2	99	283	163	333	2.30e-96	287
MsaG004595	MtrunA17_Chr2g0321291	69.841	189	41	4	99	284	130	305	6.23e-96	285
MsaG004595	MtrunA17_Chr4g0026521	68.254	189	45	4	99	284	115	291	1.59e-95	283
MsaG004595	MtrunA17_Chr4g0053341	68.391	174	50	2	87	260	61	229	9.51e-87	259
MsaG004595	MtrunA17_Chr1g0200421	41.447	152	83	6	107	255	244	392	5.60e-27	109
MsaG004595	MtrunA17_Chr2g0320341	38.415	164	92	8	105	263	235	394	1.90e-23	99.0
MsaG004595	MtrunA17_Chr1g0181381	31.081	222	135	7	60	276	8	216	1.97e-21	94.0
MsaG004595	MtrunA17_Chr3g0123941	35.000	180	97	8	117	283	139	311	3.19e-21	92.0
MsaG004595	MtrunA17_Chr7g0263941	35.862	145	78	5	107	249	55	186	4.16e-21	92.4
MsaG004595	MtrunA17_Chr8g0382121	35.542	166	99	6	117	279	127	287	7.62e-21	90.5
MsaG004595	MtrunA17_Chr1g0163001	31.188	202	124	5	50	249	7	195	1.01e-20	92.0
MsaG004595	MtrunA17_Chr1g0210821	35.862	145	78	5	107	249	65	196	1.43e-20	91.7
MsaG004595	MtrunA17_Chr4g0029521	34.507	142	81	4	109	249	61	191	1.63e-20	91.3
MsaG004595	MtrunA17_Chr1g0185121	34.667	150	84	5	107	254	61	198	3.10e-20	90.1
MsaG004595	MtrunA17_Chr1g0199101	35.172	145	79	5	107	249	68	199	3.49e-20	90.5
MsaG004595	MtrunA17_Chr8g0342421	33.333	156	89	6	109	262	85	227	5.20e-20	89.7
MsaG004595	MtrunA17_Chr1g0162971	37.063	143	75	5	109	249	64	193	5.23e-20	89.4
MsaG004595	MtrunA17_Chr1g0151351	34.161	161	91	6	91	249	47	194	5.56e-20	89.4
MsaG004595	MtrunA17_Chr7g0268961	35.664	143	77	6	109	249	45	174	8.81e-20	89.0
MsaG004595	MtrunA17_Chr2g0326381	35.211	142	80	4	109	249	55	185	1.00e-19	88.6
MsaG004595	MtrunA17_Chr1g0191991	33.520	179	90	8	103	273	74	231	1.13e-19	89.0
MsaG004595	MtrunA17_Chr2g0330171	35.172	145	79	6	107	249	67	198	3.65e-19	87.0
MsaG004595	MtrunA17_Chr8g0373541	31.188	202	117	7	85	279	29	215	5.21e-19	87.0
MsaG004595	MtrunA17_Chr4g0040571	33.553	152	88	5	107	257	60	199	3.36e-18	84.3
MsaG004595	MtrunA17_Chr3g0141431	30.405	148	89	5	107	252	43	178	7.83e-17	80.1
MsaG004595	MtrunA17_Chr2g0324991	33.103	145	84	5	102	244	8	141	1.95e-16	75.1
MsaG004595	MtrunA17_Chr8g0375521	27.083	192	124	6	61	248	2	181	3.89e-13	69.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG004595	AT1G13290.1	65.447	246	61	5	23	258	12	243	5.32e-108	316
MsaG004595	AT3G57670.1	71.429	196	40	4	99	292	201	382	4.50e-98	293
MsaG004595	AT1G51220.1	55.000	260	100	5	6	264	81	324	4.95e-95	284
MsaG004595	AT3G20880.1	77.987	159	32	1	97	255	238	393	4.91e-94	284
MsaG004595	AT1G08290.1	73.810	168	38	3	99	265	164	326	3.80e-93	279
MsaG004595	AT1G34790.1	75.159	157	36	1	100	256	130	283	5.75e-88	265
MsaG004595	AT1G34370.3	41.176	153	84	5	107	255	27	177	3.04e-26	105
MsaG004595	AT1G34370.2	41.176	153	84	5	107	255	237	387	1.16e-25	106
MsaG004595	AT1G34370.1	41.176	153	84	5	107	255	237	387	1.16e-25	106
MsaG004595	AT5G22890.1	40.645	155	84	7	106	255	209	360	1.43e-24	102
MsaG004595	AT5G03150.1	35.211	142	80	4	109	249	76	206	5.76e-21	92.8
MsaG004595	AT1G55110.3	33.758	157	90	5	107	261	84	228	7.50e-21	92.4
MsaG004595	AT1G55110.1	33.758	157	90	5	107	261	84	228	7.50e-21	92.4
MsaG004595	AT1G55110.2	33.758	157	90	5	107	261	84	228	7.50e-21	92.4
MsaG004595	AT5G44160.1	32.178	202	106	8	63	257	20	197	2.30e-20	91.3
MsaG004595	AT2G02070.2	35.443	158	87	5	94	249	60	204	3.75e-20	90.9
MsaG004595	AT2G02070.1	35.443	158	87	5	94	249	60	204	3.75e-20	90.9
MsaG004595	AT3G45260.2	34.615	156	90	4	109	263	62	206	3.97e-20	90.1
MsaG004595	AT3G45260.1	34.615	156	90	4	109	263	62	206	3.97e-20	90.1
MsaG004595	AT2G02080.1	36.552	145	77	5	107	249	75	206	4.02e-20	90.5
MsaG004595	AT2G02080.4	36.552	145	77	5	107	249	75	206	4.02e-20	90.5
MsaG004595	AT2G02080.5	36.552	145	77	5	107	249	75	206	4.02e-20	90.5
MsaG004595	AT2G02080.3	36.552	145	77	5	107	249	75	206	4.02e-20	90.5
MsaG004595	AT5G60470.1	35.211	142	80	4	109	249	58	188	6.10e-20	89.7
MsaG004595	AT5G60470.3	35.211	142	80	4	109	249	63	193	7.27e-20	89.7
MsaG004595	AT5G60470.2	35.211	142	80	4	109	249	67	197	7.46e-20	89.7
MsaG004595	AT5G66730.1	34.722	144	81	4	107	249	53	184	1.09e-19	89.4
MsaG004595	AT1G14580.1	37.241	145	76	6	107	249	74	205	1.30e-19	89.0
MsaG004595	AT1G14580.2	37.241	145	76	6	107	249	74	205	1.30e-19	89.0
MsaG004595	AT1G14580.3	37.241	145	76	6	107	249	88	219	1.54e-19	88.6
MsaG004595	AT1G03840.2	31.638	177	107	6	83	257	35	199	2.66e-19	88.2
MsaG004595	AT2G02080.6	36.620	142	75	5	110	249	1	129	3.31e-19	87.4
MsaG004595	AT2G02080.2	36.620	142	75	5	110	249	1	129	3.31e-19	87.4
MsaG004595	AT3G50700.1	35.172	145	79	5	107	249	55	186	5.37e-19	87.0
MsaG004595	AT5G44160.2	34.667	150	85	5	109	257	21	158	1.12e-18	85.9
MsaG004595	AT1G03840.1	31.844	179	106	6	83	257	35	201	1.50e-18	85.9
MsaG004595	AT3G13810.5	32.051	156	94	4	107	261	86	230	2.26e-18	85.5
MsaG004595	AT3G13810.2	32.895	152	90	4	107	257	92	232	2.40e-18	85.5
MsaG004595	AT3G13810.4	32.051	156	94	4	107	261	91	235	2.51e-18	85.1
MsaG004595	AT3G13810.1	32.051	156	94	4	107	261	91	235	2.51e-18	85.1
MsaG004595	AT3G13810.6	32.051	156	94	4	107	261	72	216	2.62e-18	85.1
MsaG004595	AT3G13810.3	32.895	152	90	4	107	257	78	218	2.68e-18	85.1
MsaG004595	AT4G02670.2	34.028	144	83	4	107	249	76	208	4.20e-18	84.3
MsaG004595	AT4G02670.1	34.028	144	83	4	107	249	74	206	4.36e-18	84.0

Find 81 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTGCGAGTTTGGGAGGTATT+TGG	0.247423	1:-71418088	None:intergenic
CTCCCATTATTCCTCAATAT+TGG	0.256317	1:+71418261	MsaT004595.1:CDS
AGTGAAAGTTGGATTAATTA+AGG	0.285981	1:-71418222	None:intergenic
GATCCAATATTGAGGAATAA+TGG	0.295991	1:-71418264	None:intergenic
AAAGGACCGGAGTCTCTAAA+AGG	0.306782	1:+71418659	MsaT004595.1:CDS
GATGAAGATGATGCTGGTTT+TGG	0.319383	1:-71418683	None:intergenic
TGCAGACAGTGCAAGAAAAC+TGG	0.325433	1:-71418319	None:intergenic
TCTCCTGCTCAAATCCTTGT+TGG	0.331954	1:+71418290	MsaT004595.1:CDS
TTCCTCTCTCTTGCTCCTCC+TGG	0.347551	1:+71418062	MsaT004595.1:CDS
AAAGATCACGTTCGTGCGTT+TGG	0.349116	1:+71418959	MsaT004595.1:CDS
AGAAGAATTGTGGGAAGCTT+TGG	0.351421	1:+71418894	MsaT004595.1:CDS
AATGGGAGTGTGAGATGGTT+TGG	0.355414	1:-71418246	None:intergenic
AGGGATAGTAGTAGTAATAG+TGG	0.376112	1:-71418120	None:intergenic
AGAGAGGTAGTAGTAGAAAT+AGG	0.389319	1:-71418158	None:intergenic
ATCCAATATTGAGGAATAAT+GGG	0.396877	1:-71418263	None:intergenic
CACGTTCGTGCGTTTGGTAA+TGG	0.397696	1:+71418965	MsaT004595.1:CDS
CCACATTTACAGCACAAGTA+TGG	0.408798	1:-71418190	None:intergenic
GATGGTTTGGAAGTGAAAGT+TGG	0.427167	1:-71418233	None:intergenic
TCTTTCAGTGGTCTTGCCCT+TGG	0.430630	1:-71418764	None:intergenic
TAGTAGTAATAGTGGGATGA+GGG	0.441652	1:-71418112	None:intergenic
CATTTGCTGTGAGAGGAGAT+TGG	0.445706	1:+71418861	MsaT004595.1:CDS
TTGGGAGGTATTTGGTGGCC+AGG	0.460715	1:-71418080	None:intergenic
GGGGACATGGATCTCAATAT+AGG	0.462797	1:+71418636	MsaT004595.1:CDS
GTAGTAGTAATAGTGGGATG+AGG	0.468089	1:-71418113	None:intergenic
GAAATAGGTATTTGATGCAA+GGG	0.489738	1:-71418143	None:intergenic
CATGTTGTTGAAACGGTTGA+AGG	0.493614	1:-71418348	None:intergenic
TACATGGAAGAAGAAGAAAC+TGG	0.497808	1:+71419046	MsaT004595.1:CDS
AGGAGCAAGAGAGAGGAAGA+TGG	0.499455	1:-71418057	None:intergenic
GGGATAGTAGTAGTAATAGT+GGG	0.503268	1:-71418119	None:intergenic
CATTCGAGTGTAGGAAGTGT+AGG	0.505760	1:+71418834	MsaT004595.1:CDS
CGAGTTTGGGAGGTATTTGG+TGG	0.508108	1:-71418085	None:intergenic
CCATGTTACTGTTGTGCTGA+GGG	0.513723	1:+71418719	MsaT004595.1:CDS
AGAAATAGGTATTTGATGCA+AGG	0.514616	1:-71418144	None:intergenic
ATCTAAGCTGCTGCTGCAAG+AGG	0.522289	1:-71418024	None:intergenic
GGACACATGAGAAGAATTGT+GGG	0.524360	1:+71418885	MsaT004595.1:CDS
ACAAGGATTTGAGCAGGAGA+AGG	0.531708	1:-71418287	None:intergenic
CAACCGTTTCAACAACATGC+AGG	0.536317	1:+71418352	MsaT004595.1:CDS
ATTCCAACGTGTGGGGAGCA+TGG	0.539289	1:-71418988	None:intergenic
GAAACAACATAAACTATCCA+AGG	0.546681	1:+71418747	MsaT004595.1:CDS
GAACCTGCATGTTGTTGAAA+CGG	0.548476	1:-71418355	None:intergenic
AACTCAAAGATTCCAACGTG+TGG	0.551951	1:-71418997	None:intergenic
AGGACACATGAGAAGAATTG+TGG	0.552345	1:+71418884	MsaT004595.1:CDS
AGCATTGATGAAGATGATGC+TGG	0.557005	1:-71418689	None:intergenic
AAGGACCGGAGTCTCTAAAA+GGG	0.557565	1:+71418660	MsaT004595.1:CDS
TTGTATGGTAGATGCATATG+TGG	0.564484	1:+71418615	MsaT004595.1:intron
GGAGGTATTTGGTGGCCAGG+AGG	0.567766	1:-71418077	None:intergenic
GAGGGAAGTCATTCGAGTGT+AGG	0.568390	1:+71418825	MsaT004595.1:CDS
ATAGGTATTTGATGCAAGGG+AGG	0.571468	1:-71418140	None:intergenic
GGACCAACAAGGATTTGAGC+AGG	0.574385	1:-71418293	None:intergenic
ACTCAAAGATTCCAACGTGT+GGG	0.574474	1:-71418996	None:intergenic
ACACACTACAAAAGAAAGCA+TGG	0.577637	1:+71418803	MsaT004595.1:CDS
CAAGGATTTGAGCAGGAGAA+GGG	0.578543	1:-71418286	None:intergenic
TAAAGTAAATGAAAATTACA+TGG	0.583660	1:+71419030	MsaT004595.1:CDS
AGTAGTAATAGTGGGATGAG+GGG	0.585249	1:-71418111	None:intergenic
GCAGACAGTGCAAGAAAACT+GGG	0.587578	1:-71418318	None:intergenic
TTGCTGTGAGAGGAGATTGG+AGG	0.592461	1:+71418864	MsaT004595.1:CDS
GGCCAGGAGGAGCAAGAGAG+AGG	0.593784	1:-71418064	None:intergenic
GGAATAATGGGAGTGTGAGA+TGG	0.594723	1:-71418251	None:intergenic
ATCTCAATATAGGAAAGGAC+CGG	0.597133	1:+71418646	MsaT004595.1:CDS
CCATACTTGTGCTGTAAATG+TGG	0.604131	1:+71418190	MsaT004595.1:CDS
AGGGTTCTGAAATCTTTCAG+TGG	0.606548	1:-71418776	None:intergenic
GGAGAAGGGATCCAATATTG+AGG	0.614687	1:-71418272	None:intergenic
ACCATGTTACTGTTGTGCTG+AGG	0.615026	1:+71418718	MsaT004595.1:CDS
CATGGATCTCAATATAGGAA+AGG	0.616598	1:+71418641	MsaT004595.1:CDS
TGTATGGTAGATGCATATGT+GGG	0.620648	1:+71418616	MsaT004595.1:intron
AGGAAGTCATTTGCTGTGAG+AGG	0.625916	1:+71418854	MsaT004595.1:CDS
CCCTCAGCACAACAGTAACA+TGG	0.627644	1:-71418719	None:intergenic
CTCAAAGATTCCAACGTGTG+GGG	0.627798	1:-71418995	None:intergenic
GTAGTAATAGTGGGATGAGG+GGG	0.632310	1:-71418110	None:intergenic
TAGATGCATATGTGGGGACA+TGG	0.632523	1:+71418623	MsaT004595.1:intron
AGTATGGTCATGGTGAAGAG+AGG	0.640967	1:-71418174	None:intergenic
TAGGTATTTGATGCAAGGGA+GGG	0.641902	1:-71418139	None:intergenic
ACTACAAAAGAAAGCATGGA+GGG	0.646182	1:+71418807	MsaT004595.1:CDS
TGGCCATGCTCCCCACACGT+TGG	0.648703	1:+71418985	MsaT004595.1:CDS
AAACAACATAAACTATCCAA+GGG	0.649476	1:+71418748	MsaT004595.1:CDS
TTACAGCACAAGTATGGTCA+TGG	0.652632	1:-71418184	None:intergenic
ACAGTGCAAGAAAACTGGGT+AGG	0.667615	1:-71418314	None:intergenic
AAAACTGGGTAGGACCAACA+AGG	0.677453	1:-71418304	None:intergenic
GTACTGATGATGAGTTTGCA+TGG	0.690956	1:-71417979	None:intergenic
CACTACAAAAGAAAGCATGG+AGG	0.735997	1:+71418806	MsaT004595.1:CDS
GTATGGTAGATGCATATGTG+GGG	0.763722	1:+71418617	MsaT004595.1:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	71417981	71419117	71417981	ID=MsaG004595
Chr1	mRNA	71417981	71419117	71417981	ID=MsaT004595.1;Parent=MsaG004595
Chr1	exon	71417981	71418373	71417981	ID=MsaT004595.1.exon1;Parent=MsaT004595.1
Chr1	CDS	71417981	71418373	71417981	ID=cds.MsaT004595.1;Parent=MsaT004595.1
Chr1	exon	71418626	71419117	71418626	ID=MsaT004595.1.exon2;Parent=MsaT004595.1
Chr1	CDS	71418626	71419117	71418626	ID=cds.MsaT004595.1;Parent=MsaT004595.1

Gene Sequence

>MsaT004595.1

ATGCAAACTCATCATCAGTACTACTCATTCTCTTGTGAGAGTGCCTCTTGCAGCAGCAGCTTAGATGATGAAGATTCCATCTTCCTCTCTCTTGCTCCTCCTGGCCACCAAATACCTCCCAAACTCGCACCCCCTCATCCCACTATTACTACTACTATCCCTCCCTTGCATCAAATACCTATTTCTACTACTACCTCTCTTCACCATGACCATACTTGTGCTGTAAATGTGGCACTTAATGCCTTAATTAATCCAACTTTCACTTCCAAACCATCTCACACTCCCATTATTCCTCAATATTGGATCCCTTCTCCTGCTCAAATCCTTGTTGGTCCTACCCAGTTTTCTTGCACTGTCTGCAACAAAACCTTCAACCGTTTCAACAACATGCAGATGCATATGTGGGGACATGGATCTCAATATAGGAAAGGACCGGAGTCTCTAAAAGGGCCAAAACCAGCATCATCTTCATCAATGCTGAAACTACCATGTTACTGTTGTGCTGAGGGTTGCAGAAACAACATAAACTATCCAAGGGCAAGACCACTGAAAGATTTCAGAACCCTTCAAACACACTACAAAAGAAAGCATGGAGGGAAGTCATTCGAGTGTAGGAAGTGTAGGAAGTCATTTGCTGTGAGAGGAGATTGGAGGACACATGAGAAGAATTGTGGGAAGCTTTGGTTTTGTATCTGTGGTTCTGATTTCAAACACAAAAGATCACTAAAAGATCACGTTCGTGCGTTTGGTAATGGCCATGCTCCCCACACGTTGGAATCTTTGAGTTTTGATGGACATAAAGTAAATGAAAATTACATGGAAGAAGAAGAAACTGGAAGTGAAGATGAAGACAATAACAGTGAAGTTGTTTTTAGTTTGAATTAA

Protein sequence

>MsaT004595.1

MQTHHQYYSFSCESASCSSSLDDEDSIFLSLAPPGHQIPPKLAPPHPTITTTIPPLHQIPISTTTSLHHDHTCAVNVALNALINPTFTSKPSHTPIIPQYWIPSPAQILVGPTQFSCTVCNKTFNRFNNMQMHMWGHGSQYRKGPESLKGPKPASSSSMLKLPCYCCAEGCRNNINYPRARPLKDFRTLQTHYKRKHGGKSFECRKCRKSFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGNGHAPHTLESLSFDGHKVNENYMEEEETGSEDEDNNSEVVFSLN*