AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG004712


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG004712 MtrunA17_Chr1g0200001 96.154 1664 52 5 1 1661 1 1655 0.0 3289
MsaG004712 MtrunA17_Chr6g0462071 49.963 1369 585 29 1 1302 1 1336 0.0 1117
MsaG004712 MtrunA17_Chr6g0462071 40.936 171 64 8 1358 1507 1320 1474 2.69e-19 95.5
MsaG004712 MtrunA17_Chr6g0462081 47.755 245 122 5 871 1110 22 265 1.01e-46 169
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG004712 AT3G52250.2 36.511 1049 571 28 129 1129 228 1229 2.35e-154 515
MsaG004712 AT3G52250.2 45.614 171 83 7 1 164 1 168 1.92e-31 135
MsaG004712 AT3G52250.2 38.356 146 66 6 1369 1510 1479 1604 7.82e-13 74.7
MsaG004712 AT3G52250.1 36.511 1049 571 28 129 1129 228 1229 2.35e-154 515
MsaG004712 AT3G52250.1 45.614 171 83 7 1 164 1 168 1.92e-31 135
MsaG004712 AT3G52250.1 38.356 146 66 6 1369 1510 1479 1604 7.82e-13 74.7

Find 423 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTTTCACATCACCATTTC+TGG 0.099421 1:-73020565 None:intergenic
CATCAGTCTGTTTGACCTTT+TGG 0.147569 1:-73020497 None:intergenic
GACCATCAGCTTCCTCTTTC+CGG 0.172635 1:+73020357 MsaT004712.1:CDS
AAAACGGTTTGAAAGATTTA+AGG 0.182155 1:+73017396 MsaT004712.1:CDS
ACGGTTTCCGAGGGTTCTTC+TGG 0.182952 1:+73019940 MsaT004712.1:CDS
TCCTACATCATCTTCCAATT+TGG 0.198327 1:+73020887 MsaT004712.1:CDS
GAAAGAAGCCTAGGCTTAAT+TGG 0.205176 1:+73014704 MsaT004712.1:CDS
CTGCATTTGGAAAAGATTTC+CGG 0.212447 1:+73018738 MsaT004712.1:CDS
TCTGAAAATCCTGTAACTTT+TGG 0.231138 1:-73014862 None:intergenic
TTGAAGAAATTTGCTGCATT+TGG 0.231426 1:+73018725 MsaT004712.1:CDS
CTTCAGGCTGTATCATCTTT+TGG 0.233706 1:+73019361 MsaT004712.1:CDS
GTCCTCTACTTGTGATATTC+AGG 0.238661 1:+73020293 MsaT004712.1:CDS
TCCACAAGTTCAGCCATTTA+TGG 0.251864 1:+73021043 MsaT004712.1:CDS
CAAATGCCGTTCACTATTCT+TGG 0.252464 1:-73020937 None:intergenic
TCAAGGGTTGTTTGAATATA+GGG 0.252482 1:-73019243 None:intergenic
AGGCGTGGATGATAAATTAT+TGG 0.260719 1:+73016436 MsaT004712.1:intron
TTGACTGGAAGCCGCTTAAA+TGG 0.260978 1:+73014488 MsaT004712.1:CDS
CTGGGGCATCTTCACTGTAT+TGG 0.262238 1:-73016906 None:intergenic
CTTCGCTTCGCAGTCAAAAT+AGG 0.263813 1:-73020627 None:intergenic
CAGTGATGAGTTATGGTTAT+TGG 0.265739 1:+73020769 MsaT004712.1:CDS
TGGGGCATCTTCACTGTATT+GGG 0.273880 1:-73016905 None:intergenic
TGTTGACTCCTTGAATAGTT+TGG 0.276071 1:+73016565 MsaT004712.1:CDS
CTATTAATAAGTTGCTGATA+TGG 0.280369 1:+73016660 MsaT004712.1:CDS
GAAGATGCCTGCATTAATAT+TGG 0.290191 1:+73018580 MsaT004712.1:CDS
CAAATTGGGCTTTCCTTCAT+AGG 0.299329 1:-73014590 None:intergenic
AATGCTTTGTCCGCTGTAAT+AGG 0.300408 1:+73017107 MsaT004712.1:CDS
GTTGACTCCTTGAATAGTTT+GGG 0.303473 1:+73016566 MsaT004712.1:CDS
GAAAATAAGCATGTCTCCTT+TGG 0.304458 1:+73020159 MsaT004712.1:CDS
GTCAAGGGTTGTTTGAATAT+AGG 0.304984 1:-73019244 None:intergenic
ATTGATTATCAGATGTTTAG+AGG 0.317153 1:+73021011 MsaT004712.1:CDS
GAAAATATGGCAGGAGTAGT+AGG 0.326814 1:+73014194 MsaT004712.1:CDS
CGATCCCAAGGCAATGGTTC+TGG 0.330566 1:-73013592 None:intergenic
ACCATCAGCTTCCTCTTTCC+GGG 0.330924 1:+73020358 MsaT004712.1:CDS
GGTGTCAATGGGTTGGGAAC+AGG 0.330991 1:+73014430 MsaT004712.1:CDS
GTCCCTTTGGGCAGAGAGAT+TGG 0.336105 1:+73014230 MsaT004712.1:CDS
AGAAACGTTTACAATGTTCT+TGG 0.336514 1:-73019426 None:intergenic
GATCCAAGTTCTGACGATTC+TGG 0.340629 1:+73016620 MsaT004712.1:CDS
ATATGCGCCTACTGTCTATT+AGG 0.342728 1:+73017470 MsaT004712.1:CDS
TCATGTTCAGGATTGAGTTT+TGG 0.342826 1:+73020132 MsaT004712.1:CDS
ATGTCATTGCAGGTAATAAA+AGG 0.343646 1:+73018984 MsaT004712.1:CDS
AGTGATGAGTTATGGTTATT+GGG 0.344144 1:+73020770 MsaT004712.1:CDS
ATCTTTGTCAACAACACATT+GGG 0.345105 1:-73020010 None:intergenic
TGTTGGACATCAACCATAAA+TGG 0.346605 1:-73021056 None:intergenic
CGGTTTCCGAGGGTTCTTCT+GGG 0.347689 1:+73019941 MsaT004712.1:CDS
GGTTTCGTCTGCTGGTAATA+TGG 0.348787 1:+73014798 MsaT004712.1:CDS
CCTGTGGTCAATTCATGTTC+AGG 0.350434 1:+73020120 MsaT004712.1:CDS
TCACGGGGTGATGGAAAATA+TGG 0.350524 1:+73014181 MsaT004712.1:CDS
GGAAGATTCCTTCTGGGATA+TGG 0.350979 1:+73019013 MsaT004712.1:CDS
AGGAAAGATGTTGGTAAGCT+AGG 0.352515 1:+73018854 MsaT004712.1:CDS
TCCACCAATTCTGACAAGTA+TGG 0.354865 1:+73021254 MsaT004712.1:CDS
GATACGAGGAAGATTCCTTC+TGG 0.357872 1:+73019006 MsaT004712.1:CDS
ACCACCATACTTGTCAGAAT+TGG 0.361162 1:-73021258 None:intergenic
GGCGTGGATGATAAATTATT+GGG 0.361765 1:+73016437 MsaT004712.1:intron
GATAAAAGCCCAAAAGTTAC+AGG 0.362840 1:+73014853 MsaT004712.1:CDS
ACTGCTGTTGAGTCGCATTC+AGG 0.363531 1:+73014628 MsaT004712.1:CDS
CAGCAATGGTTCTCCGAATC+TGG 0.364374 1:+73014273 MsaT004712.1:CDS
GGCTCTGATGTTAGTGGAGT+TGG 0.365232 1:+73019793 MsaT004712.1:CDS
TCAGTCAATGGAGTTGGCTT+GGG 0.365440 1:+73019841 MsaT004712.1:CDS
CTTCAGTTTCTCAAAACATT+CGG 0.369777 1:-73018831 None:intergenic
TTGTTGGAACCAAGCTTAGA+TGG 0.371390 1:-73018490 None:intergenic
TCACCGAGATTTCAATCGTT+GGG 0.372835 1:+73013693 MsaT004712.1:CDS
GTCATGGTTATGGTGTTTCT+CGG 0.379599 1:+73014116 MsaT004712.1:CDS
TGCGGCCTCCTCGCCAGATT+CGG 0.380223 1:-73014286 None:intergenic
AGCTGACATTTCGAAGGTAT+TGG 0.381521 1:+73016685 MsaT004712.1:CDS
TGGTGGCTGTTGCTCCAAAT+TGG 0.382082 1:-73020901 None:intergenic
CAAATCATTATGGCATTCTT+CGG 0.383357 1:+73020527 MsaT004712.1:CDS
GATAATAGAGGAGGTCCCTT+TGG 0.386002 1:+73014217 MsaT004712.1:CDS
TGCAGCTAAAACTAACTTGA+TGG 0.386341 1:+73018886 MsaT004712.1:CDS
ATGAATAGCGTTGGAAGGCC+TGG 0.388096 1:+73021167 MsaT004712.1:CDS
CATTTGCATCATCATTCAAC+GGG 0.388299 1:-73019513 None:intergenic
AAAGAAGCCTAGGCTTAATT+GGG 0.388409 1:+73014705 MsaT004712.1:CDS
GCGAAGCGAAGTGAAGAAAA+TGG 0.390029 1:+73020639 MsaT004712.1:CDS
AACGGGGATCCGTTAATTCC+AGG 0.391422 1:-73019496 None:intergenic
GCAACGGAAGATGGAGTTGC+AGG 0.391696 1:-73014895 None:intergenic
ATCTACCAAGTTGGGGCTGA+TGG 0.391811 1:-73014833 None:intergenic
CCGCTTAAATGGACCCGATC+TGG 0.394661 1:+73014499 MsaT004712.1:CDS
TGGTCGGCCGTTGGTTTCAC+GGG 0.394681 1:+73014165 MsaT004712.1:CDS
AGGTTGGGTGATGTTACCTT+TGG 0.397131 1:+73017187 MsaT004712.1:CDS
TCAGCATTCTGTGAAATATC+AGG 0.398068 1:-73019268 None:intergenic
TGCTGGGAGCCCGATGCTAC+TGG 0.398205 1:-73016788 None:intergenic
GCTAAGACGGGTGGTGTCAA+TGG 0.398998 1:+73014418 MsaT004712.1:CDS
GGAGCAACAGCCACCATTGC+AGG 0.399343 1:+73020908 MsaT004712.1:CDS
CAAAGTTCATATCTAGTAAT+GGG 0.400546 1:+73018624 MsaT004712.1:CDS
TTCAGTCAATGGAGTTGGCT+TGG 0.405379 1:+73019840 MsaT004712.1:CDS
CGTTCACGGTTTACTTTCCC+TGG 0.406845 1:+73017577 MsaT004712.1:CDS
GAATTCTCTCTATCACATCT+TGG 0.407470 1:-73014454 None:intergenic
TCTTTGTTTGATCCTGGATC+AGG 0.408096 1:-73014769 None:intergenic
TGTTAGAGATGATGAATCTT+GGG 0.408557 1:+73021295 MsaT004712.1:CDS
GGAGTGTGGTTCTGTTGCTT+TGG 0.409009 1:+73019912 MsaT004712.1:CDS
GAAACGTTTACAATGTTCTT+GGG 0.410705 1:-73019425 None:intergenic
GAAGAGCCTGGTCATGGTTA+TGG 0.412010 1:+73014106 MsaT004712.1:CDS
AGGTGTATTGACATCATTAC+AGG 0.412605 1:-73017149 None:intergenic
TTCTGAAGGTCATGGTAAGC+AGG 0.412638 1:+73014063 MsaT004712.1:intron
GATGAATCTTGGGGAGGGAA+AGG 0.415709 1:+73021305 MsaT004712.1:CDS
AACCCCATACCTGGAATTAA+CGG 0.417746 1:+73019487 MsaT004712.1:CDS
CCTTCCTTGCTGCTGCAAGC+TGG 0.418008 1:-73021132 None:intergenic
GATGGCTCGGTTTCGTCTGC+TGG 0.419173 1:+73014790 MsaT004712.1:CDS
ACATTCTTTGGGAACTAACT+TGG 0.419764 1:-73017299 None:intergenic
ATGGTCGGCCGTTGGTTTCA+CGG 0.422035 1:+73014164 MsaT004712.1:CDS
GAGCCATCTTTGTTTGATCC+TGG 0.423467 1:-73014775 None:intergenic
ATGGTCATTTCAAATCATTA+TGG 0.423776 1:+73020517 MsaT004712.1:CDS
AGAAGACTTGTTGTTCAACT+TGG 0.425156 1:-73020673 None:intergenic
AGCTTGTCTTCTCGAGGCTC+AGG 0.425759 1:+73014523 MsaT004712.1:CDS
AATGGTGATGTGAAACTGTT+TGG 0.427428 1:+73020570 MsaT004712.1:CDS
GTTTCCTTGTTACCATCTAC+AGG 0.428077 1:-73019202 None:intergenic
TGAGACTGTTAGTGTTCTCC+AGG 0.428385 1:+73020389 MsaT004712.1:CDS
TTATCTTAACCTTGATAAGT+TGG 0.430042 1:+73016541 MsaT004712.1:CDS
AAATTAATAATCTCTGTTGT+TGG 0.431752 1:-73018506 None:intergenic
ATCAATTGAACTTGTTATGC+AGG 0.433645 1:-73019179 None:intergenic
GTGGTTGATGCTGATAAGTC+TGG 0.434207 1:+73019583 MsaT004712.1:CDS
AGTTCAATTGATCCTGTAGA+TGG 0.436874 1:+73019190 MsaT004712.1:CDS
AGCAAGACTCGGAAATGTCT+TGG 0.437017 1:+73019451 MsaT004712.1:CDS
ACCATAAATGGCTGAACTTG+TGG 0.437682 1:-73021044 None:intergenic
ATAATAGAGGAGGTCCCTTT+GGG 0.438287 1:+73014218 MsaT004712.1:CDS
ACCGATCTTCCATTCGTTCA+CGG 0.438862 1:+73017563 MsaT004712.1:CDS
TGCTGCTGCAGCTGATGTAT+TGG 0.439293 1:+73019117 MsaT004712.1:CDS
TTGACTGATTCACCTGCTCC+TGG 0.441023 1:+73016494 MsaT004712.1:CDS
TTGTTAGAGATGATGAATCT+TGG 0.442358 1:+73021294 MsaT004712.1:CDS
ATGAATCTTGGGGAGGGAAA+GGG 0.443546 1:+73021306 MsaT004712.1:CDS
CTGCAGTTGTCTTGTGATCA+AGG 0.444878 1:-73018775 None:intergenic
GACAAGTCTGGTTCAGTCAA+TGG 0.447114 1:+73019829 MsaT004712.1:CDS
TCTCAAAACATTCGGATTTG+TGG 0.447544 1:-73018823 None:intergenic
ACGGGTGGTGTCAATGGGTT+GGG 0.447912 1:+73014424 MsaT004712.1:CDS
TGAAGAGCCCAAACTATTCA+AGG 0.448312 1:-73016573 None:intergenic
GATAAATTATTGGGGAAGGC+TGG 0.449258 1:+73016446 MsaT004712.1:CDS
GAGGGAAAGGGGACTTAGGC+AGG 0.449466 1:+73021318 MsaT004712.1:CDS
GGAAAGATGTTGGTAAGCTA+GGG 0.450009 1:+73018855 MsaT004712.1:CDS
GTGGGTGAGAGGAATATGTT+GGG 0.452807 1:-73014345 None:intergenic
AGTAGCTCGAGGAGCATGGC+TGG 0.453210 1:+73014559 MsaT004712.1:CDS
AAAACTAACTTGATGGCATC+AGG 0.454263 1:+73018893 MsaT004712.1:CDS
GAACTGCAGGCAACGGAAGA+TGG 0.455019 1:-73014904 None:intergenic
CTGACGATTCTGGTCTAGTT+CGG 0.455056 1:+73016630 MsaT004712.1:CDS
AGAAGACAAGCTTCCAGATC+GGG 0.458937 1:-73014512 None:intergenic
ATTCTTTGAGTTCAATTGAC+TGG 0.459365 1:+73014473 MsaT004712.1:CDS
CGTTGGCTATTGAGAAAGAA+AGG 0.460426 1:+73018660 MsaT004712.1:CDS
CAGATTCGGAGAACCATTGC+TGG 0.462288 1:-73014272 None:intergenic
CTGCTGTTGAGTCGCATTCA+GGG 0.462388 1:+73014629 MsaT004712.1:CDS
GCTCGTAGCTTCCAGAGGAT+TGG 0.462557 1:-73019662 None:intergenic
ACTGTCTATGAGTGATCTTC+AGG 0.462908 1:+73020200 MsaT004712.1:CDS
GTGATGGCAGATGTCATTGC+AGG 0.463020 1:+73018974 MsaT004712.1:intron
GGATCGTAAGGACTTCTTCA+AGG 0.463484 1:+73013609 MsaT004712.1:CDS
AAAGAAGAGTCGGGCAAGGA+TGG 0.464473 1:-73020828 None:intergenic
CAGTTTCTTCAAGTGATACC+AGG 0.465844 1:+73017032 MsaT004712.1:CDS
GCAGCAAGGAAGGGGAATGA+TGG 0.468489 1:+73021142 MsaT004712.1:CDS
ATTCATTTAATTTAGCAGAC+AGG 0.468724 1:-73019684 None:intergenic
AGGATCGTGCAGCGGTGTCT+CGG 0.469170 1:+73021202 MsaT004712.1:CDS
AATTCTCTCTATCACATCTT+GGG 0.470279 1:-73014453 None:intergenic
ATCCCCAACGATTGAAATCT+CGG 0.472130 1:-73013696 None:intergenic
TGTTGTTCAACTTGGGATGA+TGG 0.477023 1:-73020665 None:intergenic
AGACCAGAATCGTCAGAACT+TGG 0.478327 1:-73016623 None:intergenic
TGGAAGGCCTGGGATTCTAG+TGG 0.478834 1:+73021178 MsaT004712.1:CDS
CCAGCTTGCAGCAGCAAGGA+AGG 0.479058 1:+73021132 MsaT004712.1:CDS
GACGGGTGGTGTCAATGGGT+TGG 0.479711 1:+73014423 MsaT004712.1:CDS
GACAAGTATGGTGGTCAAAA+CGG 0.480761 1:+73021266 MsaT004712.1:CDS
AGAATACATCTTGTCGGTGT+TGG 0.482064 1:-73021073 None:intergenic
CAGCAACTTATTAATAGCAT+TGG 0.483219 1:-73016654 None:intergenic
GGATCCGTTAATTCCAGGTA+TGG 0.483446 1:-73019491 None:intergenic
CCGTTGGTTTCACGGGGTGA+TGG 0.483991 1:+73014172 MsaT004712.1:CDS
GCCGCCAGAACCATTGCCTT+GGG 0.484019 1:+73013588 MsaT004712.1:CDS
CAAACTTATGTTCTAGCTAC+GGG 0.485314 1:+73017212 MsaT004712.1:CDS
AATTTAGAAGTTGCTGATCC+AGG 0.485527 1:-73016983 None:intergenic
TTGACACTCTTGGGGATGAA+AGG 0.487394 1:+73019089 MsaT004712.1:CDS
ATCTCAGTGTCCAGTAGCAT+CGG 0.487814 1:+73016778 MsaT004712.1:CDS
TTCTGTTGCTTTGGATAGAA+CGG 0.488429 1:+73019921 MsaT004712.1:CDS
TTCATCATGGAATGTATTCA+AGG 0.488797 1:-73019638 None:intergenic
ATGAGTTATGGTTATTGGGA+AGG 0.489537 1:+73020774 MsaT004712.1:CDS
GTTTCCTCTTCGACCCCAAA+AGG 0.490290 1:+73020482 MsaT004712.1:CDS
TGCCGCCAGAACCATTGCCT+TGG 0.491813 1:+73013587 MsaT004712.1:CDS
GCAATACAAAGTAGACAGTC+TGG 0.491815 1:+73020801 MsaT004712.1:CDS
ACCATACTTGTCAGAATTGG+TGG 0.492167 1:-73021255 None:intergenic
GGTTATGGTGTTTCTCGGTC+CGG 0.492761 1:+73014121 MsaT004712.1:CDS
TGCTACATAAATTAGTTGAC+TGG 0.493083 1:-73016925 None:intergenic
ACAAAGTTCATATCTAGTAA+TGG 0.493234 1:+73018623 MsaT004712.1:CDS
AAGCTAGGCTCTGATGTTAG+TGG 0.494092 1:+73019787 MsaT004712.1:CDS
TTGAACTGCTATCTGCCTGC+TGG 0.495512 1:-73016805 None:intergenic
TGTGGGTGAGAGGAATATGT+TGG 0.496870 1:-73014346 None:intergenic
AATAGTGAACGGCATTTGAC+TGG 0.496893 1:+73020942 MsaT004712.1:CDS
TGACACTCTTGGGGATGAAA+GGG 0.497560 1:+73019090 MsaT004712.1:CDS
ATCACCGAGATTTCAATCGT+TGG 0.498754 1:+73013692 MsaT004712.1:CDS
ATACGAGGAAGATTCCTTCT+GGG 0.499616 1:+73019007 MsaT004712.1:CDS
ATTCTGAGTGGAAGATGGAT+TGG 0.500553 1:-73020604 None:intergenic
GTTCTTCATATTACTGCTAC+AGG 0.501063 1:-73017542 None:intergenic
AAAGTTGATGTACCTGATCC+AGG 0.501734 1:+73014757 MsaT004712.1:CDS
GAGATGATGAATCTTGGGGA+GGG 0.502192 1:+73021300 MsaT004712.1:CDS
TGAATAGCGTTGGAAGGCCT+GGG 0.502795 1:+73021168 MsaT004712.1:CDS
GATCCGTTAATTCCAGGTAT+GGG 0.503607 1:-73019490 None:intergenic
AGTAGCATCGGGCTCCCAGC+AGG 0.503651 1:+73016790 MsaT004712.1:CDS
TATTAATGCAGGCATCTTCA+AGG 0.504328 1:-73018576 None:intergenic
CATCTTTGTCAACAACACAT+TGG 0.504959 1:-73020011 None:intergenic
AGGCGGTCGGCTGCGAAACT+CGG 0.504960 1:-73013722 None:intergenic
ATGGTAATGTAAAAGCATCA+AGG 0.505302 1:+73019032 MsaT004712.1:CDS
ATGTGAGAAAACAGTTAGCC+AGG 0.506100 1:+73020263 MsaT004712.1:CDS
GGTTAAGATAAAACTTCTGC+AGG 0.506275 1:-73016529 None:intergenic
CCATGATGAATCCAATCCTC+TGG 0.507935 1:+73019651 MsaT004712.1:CDS
AGAACATAAGTTTGCTCCAA+AGG 0.508399 1:-73017203 None:intergenic
GCTGCAGCTGATGTATTGGC+TGG 0.508616 1:+73019121 MsaT004712.1:CDS
CTCCAATCTCTCTGCCCAAA+GGG 0.509486 1:-73014232 None:intergenic
AATCTTGAAAACCCCATACC+TGG 0.511274 1:+73019478 MsaT004712.1:CDS
TACAGAAGTAAAGGATAGGT+TGG 0.511708 1:+73017171 MsaT004712.1:CDS
AAGTCTCTCAGAAGGTCATT+CGG 0.514342 1:+73016849 MsaT004712.1:CDS
TGGGGAGGGAAAGGGGACTT+AGG 0.514968 1:+73021314 MsaT004712.1:CDS
TGAATCTTGGGGAGGGAAAG+GGG 0.515480 1:+73021307 MsaT004712.1:CDS
AACAGTCTCAACATGGCTCC+CGG 0.515507 1:-73020376 None:intergenic
TCGGTCCGGCGACAAGATGT+TGG 0.517924 1:+73014135 MsaT004712.1:CDS
GTTTCCGAGGGTTCTTCTGG+GGG 0.518112 1:+73019943 MsaT004712.1:CDS
TTGTGCACAACTGACAAGTC+TGG 0.519383 1:+73019817 MsaT004712.1:CDS
TTCTCGTCCAATATTAATGC+AGG 0.519652 1:-73018587 None:intergenic
TCCTCTACTTGTGATATTCA+GGG 0.519734 1:+73020294 MsaT004712.1:CDS
GTCTCTAAAATCTGAATCTG+TGG 0.520565 1:+73016751 MsaT004712.1:CDS
AGCTAACAAGAAAGAAGAGT+CGG 0.521032 1:-73020838 None:intergenic
AGCTTGCAGCAGCAAGGAAG+GGG 0.521568 1:+73021134 MsaT004712.1:CDS
TCTCAGAGAATACATCTTGT+CGG 0.522774 1:-73021079 None:intergenic
AAGTAGAGGACAGTCGATCC+TGG 0.523476 1:-73020281 None:intergenic
CTAGAAGTTGCATCTTCAGA+CGG 0.523948 1:-73014682 None:intergenic
TGAGTTATGGTTATTGGGAA+GGG 0.524318 1:+73020775 MsaT004712.1:CDS
GAAGACTTGTTGTTCAACTT+GGG 0.524646 1:-73020672 None:intergenic
GTTGCCTGCAGTTCCTCACC+AGG 0.525585 1:+73014913 MsaT004712.1:CDS
TGCATTAATATTGGACGAGA+AGG 0.526316 1:+73018589 MsaT004712.1:CDS
TTCTTTCCACAAGTGATGCA+AGG 0.527030 1:-73017446 None:intergenic
CAATACACCTACAGAAGTAA+AGG 0.527076 1:+73017162 MsaT004712.1:CDS
AGTCAACATCCAACTTATCA+AGG 0.527155 1:-73016550 None:intergenic
ATAGACAGTGCTGACGTATG+AGG 0.527339 1:-73020186 None:intergenic
GCAACAGAACCACACTCCCT+TGG 0.527610 1:-73019907 None:intergenic
GGGGCTATGATAACTTATCA+AGG 0.527951 1:+73017053 MsaT004712.1:CDS
CAATAACCATAACTCATCAC+TGG 0.528467 1:-73020768 None:intergenic
TGCAGGAGATTCTGAAAACC+AGG 0.528559 1:-73016512 None:intergenic
ATTAATGTTGAATCTAAGCT+AGG 0.529004 1:+73019772 MsaT004712.1:CDS
GAGTTTCGCAGCCGACCGCC+TGG 0.529360 1:+73013724 MsaT004712.1:CDS
AAGAAGAGTCGGGCAAGGAT+GGG 0.529420 1:-73020827 None:intergenic
AAAGGGGTATGATCAATCCT+TGG 0.529771 1:+73018678 MsaT004712.1:CDS
GGTTTCCGAGGGTTCTTCTG+GGG 0.530133 1:+73019942 MsaT004712.1:CDS
CTGTGAAATATCAGGTGTCA+AGG 0.530637 1:-73019260 None:intergenic
ACCATTGCCTTGGGATCGTA+AGG 0.532809 1:+73013597 MsaT004712.1:CDS
GACAAGATGTTGGAGGAAGA+TGG 0.532959 1:+73014145 MsaT004712.1:CDS
GTCAATGGAGTTGGCTTGGG+AGG 0.533146 1:+73019844 MsaT004712.1:CDS
TCAAAGCCTTGCATCACTTG+TGG 0.533178 1:+73017440 MsaT004712.1:CDS
TCTGGTTCAGTCAATGGAGT+TGG 0.533428 1:+73019835 MsaT004712.1:CDS
GCCTAGGCTTAATTGGGGCG+AGG 0.533789 1:+73014711 MsaT004712.1:CDS
CCAGAGGATTGGATTCATCA+TGG 0.534328 1:-73019651 None:intergenic
GTTGTTCAACTTGGGATGAT+GGG 0.534350 1:-73020664 None:intergenic
ATAGGATTCTGAGTGGAAGA+TGG 0.534964 1:-73020609 None:intergenic
CGGTTGGCTCCGTGGCGAGA+TGG 0.535502 1:+73013656 MsaT004712.1:CDS
CCGTTCACTATTCTTGGCAA+AGG 0.535805 1:-73020931 None:intergenic
AACATTAATTGCACAAACAA+CGG 0.536070 1:-73019758 None:intergenic
GTTAAACATATAGCAGATGC+AGG 0.536991 1:+73020033 MsaT004712.1:CDS
ATTGGACGAGAAGGAGAAGA+TGG 0.537020 1:+73018598 MsaT004712.1:CDS
GCAAACTTATGTTCTAGCTA+CGG 0.537028 1:+73017211 MsaT004712.1:CDS
TCTTTCTCTTCTGATGTCCA+AGG 0.537333 1:-73018695 None:intergenic
GAAGCACGAAAGGTCTGAAT+CGG 0.537437 1:+73013636 MsaT004712.1:CDS
ATCCGTTAATTCCAGGTATG+GGG 0.537624 1:-73019489 None:intergenic
ACCGTGAACGAATGGAAGAT+CGG 0.538465 1:-73017564 None:intergenic
GAAGAGGATATCGATAGTCC+TGG 0.538876 1:+73016965 MsaT004712.1:CDS
AGCTGGAAACCATCTAAGCT+TGG 0.539705 1:+73018481 MsaT004712.1:intron
GGAGGAAGATGGTCGGCCGT+TGG 0.540003 1:+73014156 MsaT004712.1:CDS
GAAAGACCAGCATGCTAAGA+CGG 0.540480 1:+73014405 MsaT004712.1:CDS
AGGAGTAGTAGGGATAATAG+AGG 0.540574 1:+73014205 MsaT004712.1:CDS
CAGCAAGGAAGGGGAATGAT+GGG 0.541066 1:+73021143 MsaT004712.1:CDS
TGAACTGCTATCTGCCTGCT+GGG 0.541534 1:-73016804 None:intergenic
GCTGGGACAGATTCCTATGA+AGG 0.541730 1:+73014577 MsaT004712.1:CDS
TCAACATGGCTCCCGGAAAG+AGG 0.542615 1:-73020369 None:intergenic
AAAATATGGCAGGAGTAGTA+GGG 0.544190 1:+73014195 MsaT004712.1:CDS
TGGTAATGTAAAAGCATCAA+GGG 0.544738 1:+73019033 MsaT004712.1:CDS
CCATTTGCATCATCATTCAA+CGG 0.545135 1:-73019514 None:intergenic
TGCTCATTATTCATATCTTG+CGG 0.545208 1:-73014304 None:intergenic
GAGATTGGAGAGGTCATTCG+TGG 0.545466 1:+73014245 MsaT004712.1:CDS
TTGGCAAAGGCCTGCAATGG+TGG 0.545722 1:-73020918 None:intergenic
GTTCATATCTAGTAATGGGC+TGG 0.546102 1:+73018628 MsaT004712.1:CDS
TTCCTCCAACATCTTGTCGC+CGG 0.549490 1:-73014140 None:intergenic
AAACTGAAGAGGAAAGATGT+TGG 0.549660 1:+73018845 MsaT004712.1:CDS
TATTCAAGGCATCAGAAGGC+AGG 0.549966 1:-73019624 None:intergenic
CACCACCCGTCTTAGCATGC+TGG 0.550683 1:-73014411 None:intergenic
GTTGGCTATTGAGAAAGAAA+GGG 0.551049 1:+73018661 MsaT004712.1:CDS
ACAGAAGTAAAGGATAGGTT+GGG 0.552164 1:+73017172 MsaT004712.1:CDS
AAAGACCAGCATGCTAAGAC+GGG 0.552821 1:+73014406 MsaT004712.1:CDS
GAAAGTAAACCGTGAACGAA+TGG 0.553046 1:-73017572 None:intergenic
GATATGCGGTGTCATAGCTC+TGG 0.553528 1:+73020324 MsaT004712.1:CDS
TCTCAGTGTCCAGTAGCATC+GGG 0.555774 1:+73016779 MsaT004712.1:CDS
AGATTCTGAAAACCAGGAGC+AGG 0.555784 1:-73016506 None:intergenic
GCACCTGCATGGAATAGCCC+TGG 0.557999 1:-73020407 None:intergenic
TAGTTCCATCAGCCCCAACT+TGG 0.558863 1:+73014828 MsaT004712.1:CDS
ATGATGGGAATGAATAGCGT+TGG 0.559006 1:+73021158 MsaT004712.1:CDS
CTTTCTTTCTCAATAGCCAA+CGG 0.560032 1:-73018659 None:intergenic
TTTACAGCTAGAGACATGAA+TGG 0.560221 1:+73020975 MsaT004712.1:CDS
TCATGAAAATGACAAGGAAG+AGG 0.560363 1:+73016949 MsaT004712.1:CDS
GGAAGGCCTGGGATTCTAGT+GGG 0.564767 1:+73021179 MsaT004712.1:CDS
GATGTATTGGCTGGTATATG+TGG 0.564852 1:+73019130 MsaT004712.1:CDS
CCTAGGCTTAATTGGGGCGA+GGG 0.565007 1:+73014712 MsaT004712.1:CDS
TCTCCAGGGCTATTCCATGC+AGG 0.565245 1:+73020404 MsaT004712.1:CDS
CTAAGACGGGTGGTGTCAAT+GGG 0.566536 1:+73014419 MsaT004712.1:CDS
CCAGATCGGGTCCATTTAAG+CGG 0.567623 1:-73014499 None:intergenic
ATTTGTTGAGCCTCTGCCGT+TGG 0.567900 1:+73017003 MsaT004712.1:CDS
GCTAACAAGAAAGAAGAGTC+GGG 0.568476 1:-73020837 None:intergenic
AACGTTTCTTCAGCAAGACT+CGG 0.568747 1:+73019440 MsaT004712.1:CDS
AATGTTCCAGTGATGAGTTA+TGG 0.569272 1:+73020762 MsaT004712.1:CDS
TTGGATAGAACGGTTTCCGA+GGG 0.569559 1:+73019931 MsaT004712.1:CDS
GTCTTGGAAATGAAGTGGAA+AGG 0.569665 1:+73019971 MsaT004712.1:CDS
CAGCTTGCAGCAGCAAGGAA+GGG 0.571221 1:+73021133 MsaT004712.1:CDS
GCTACATAAATTAGTTGACT+GGG 0.571883 1:-73016924 None:intergenic
GGATAATTACTAAACGCAGC+AGG 0.572186 1:-73020867 None:intergenic
AAAATCAGAATGTGGGTGAG+AGG 0.572324 1:-73014356 None:intergenic
CAGATGTTTAGAGGTAGAGA+TGG 0.572342 1:+73021020 MsaT004712.1:CDS
GTGTTTACAAAATCAGAATG+TGG 0.572767 1:-73014364 None:intergenic
CATACCTGGTGAGGAACTGC+AGG 0.572791 1:-73014917 None:intergenic
GAGAAGACAAGCTTCCAGAT+CGG 0.573380 1:-73014513 None:intergenic
TTCAGAAATAATTAAACCAA+GGG 0.573712 1:+73019891 MsaT004712.1:CDS
CTCAAGTAGCTCGAGGAGCA+TGG 0.574631 1:+73014555 MsaT004712.1:CDS
CACGAAAGGTCTGAATCGGT+TGG 0.575571 1:+73013640 MsaT004712.1:CDS
ATCTCCAGCTTGCAGCAGCA+AGG 0.576061 1:+73021128 MsaT004712.1:CDS
GGATGATAAATTATTGGGGA+AGG 0.576556 1:+73016442 MsaT004712.1:CDS
GATCCTCCCACTAGAATCCC+AGG 0.576654 1:-73021185 None:intergenic
TGATAAGTTATCATAGCCCC+TGG 0.578026 1:-73017050 None:intergenic
GATCCAGGATCAAACAAAGA+TGG 0.579395 1:+73014772 MsaT004712.1:CDS
TGTCATAGCTCTGGTAGTAA+TGG 0.581340 1:+73020333 MsaT004712.1:CDS
TCTTTGTCTTGGAAATGAAG+TGG 0.581912 1:+73019966 MsaT004712.1:CDS
CATTCGTGGGAGGCCAGCAA+TGG 0.581955 1:+73014259 MsaT004712.1:CDS
CCCTCGCCCCAATTAAGCCT+AGG 0.583891 1:-73014712 None:intergenic
GTAGCTCGAGGAGCATGGCT+GGG 0.584317 1:+73014560 MsaT004712.1:CDS
TTGCACAATCAATGTATGAG+AGG 0.584557 1:-73017359 None:intergenic
GTCATGGTAAGCAGGGTGGT+TGG 0.584666 1:+73014071 MsaT004712.1:CDS
GTCCGGCGACAAGATGTTGG+AGG 0.584756 1:+73014138 MsaT004712.1:CDS
TCCTTACGATCCCAAGGCAA+TGG 0.584959 1:-73013598 None:intergenic
TCAAGGAGAGGAAGCACGAA+AGG 0.585365 1:+73013626 MsaT004712.1:CDS
TCTCCAATCTCTCTGCCCAA+AGG 0.586606 1:-73014233 None:intergenic
TTCTTGGCAAAGGCCTGCAA+TGG 0.587230 1:-73020921 None:intergenic
TGTTTACAAAATCAGAATGT+GGG 0.587447 1:-73014363 None:intergenic
GTCTGAATCGGTTGGCTCCG+TGG 0.588923 1:+73013648 MsaT004712.1:CDS
CAACTTCTAGAAAGAAGCCT+AGG 0.590054 1:+73014695 MsaT004712.1:CDS
TTACATTACCATATCCCAGA+AGG 0.590383 1:-73019021 None:intergenic
CGGTGTCTCGGATCCTGTGG+CGG 0.590515 1:+73021214 MsaT004712.1:CDS
GATGCATGTGTTGTTGAGGC+AGG 0.590672 1:+73019556 MsaT004712.1:CDS
GGGGTGATGGAAAATATGGC+AGG 0.591231 1:+73014185 MsaT004712.1:CDS
CCATCACCCCGTGAAACCAA+CGG 0.591923 1:-73014172 None:intergenic
AGATTGGAGAGGTCATTCGT+GGG 0.591957 1:+73014246 MsaT004712.1:CDS
CACCGAGATTTCAATCGTTG+GGG 0.593291 1:+73013694 MsaT004712.1:CDS
AGGATCAAACAAAGATGGCT+CGG 0.595068 1:+73014777 MsaT004712.1:CDS
AGAGATGATGAATCTTGGGG+AGG 0.596236 1:+73021299 MsaT004712.1:CDS
TGTAAAAGCATCAAGGGGCG+AGG 0.596661 1:+73019039 MsaT004712.1:CDS
TCTGAAGGTCATGGTAAGCA+GGG 0.597082 1:+73014064 MsaT004712.1:intron
AAATGTTTCATTCTCACCTG+TGG 0.598857 1:+73020104 MsaT004712.1:CDS
TGGGCTGGTTGAAGATCCGT+TGG 0.599359 1:+73018643 MsaT004712.1:CDS
TCCCAAGGCAATGGTTCTGG+CGG 0.600227 1:-73013589 None:intergenic
CTTCAGAAATAATTAAACCA+AGG 0.600296 1:+73019890 MsaT004712.1:CDS
AACCTATCCTTTACTTCTGT+AGG 0.600634 1:-73017169 None:intergenic
ACTGCATTTACCAACGGCAG+AGG 0.601116 1:-73017013 None:intergenic
TTTGGATAGAACGGTTTCCG+AGG 0.601407 1:+73019930 MsaT004712.1:CDS
TCCCTGAATATCACAAGTAG+AGG 0.605259 1:-73020295 None:intergenic
GCGTGTTGAAGTCTCTCAGA+AGG 0.606141 1:+73016841 MsaT004712.1:CDS
GACAGGCTCGTAGCTTCCAG+AGG 0.607368 1:-73019667 None:intergenic
TGTGAAATATCAGGTGTCAA+GGG 0.607676 1:-73019259 None:intergenic
TGGTGAGGAACTGCAGGCAA+CGG 0.608204 1:-73014911 None:intergenic
CCGTTGAATGATGATGCAAA+TGG 0.612103 1:+73019514 MsaT004712.1:CDS
AATGTATTCAAGGCATCAGA+AGG 0.612851 1:-73019628 None:intergenic
ATAATTAAACCAAGGGAGTG+TGG 0.613524 1:+73019898 MsaT004712.1:CDS
CAAGAAAGAAGAGTCGGGCA+AGG 0.614548 1:-73020832 None:intergenic
CAGCGGTGTCTCGGATCCTG+TGG 0.615518 1:+73021211 MsaT004712.1:CDS
TCTGGAAGCTTGTCTTCTCG+AGG 0.616741 1:+73014517 MsaT004712.1:CDS
TGCTGTTGAGTCGCATTCAG+GGG 0.617927 1:+73014630 MsaT004712.1:CDS
GCGAAGATATCACGGTGTGT+AGG 0.619795 1:+73019394 MsaT004712.1:CDS
ATGAATCAAGAGAAATCAGT+GGG 0.621536 1:+73019701 MsaT004712.1:CDS
CAAAAGGTCAAACAGACTGA+TGG 0.622931 1:+73020498 MsaT004712.1:CDS
AGTAGTAGGGATAATAGAGG+AGG 0.623417 1:+73014208 MsaT004712.1:CDS
GGCATTTCCTAATAGACAGT+AGG 0.627767 1:-73017477 None:intergenic
AAGAAGTCCTTACGATCCCA+AGG 0.628497 1:-73013604 None:intergenic
GAGACTGTTAGTGTTCTCCA+GGG 0.628665 1:+73020390 MsaT004712.1:CDS
TCCAAATTGGAAGATGATGT+AGG 0.628761 1:-73020888 None:intergenic
GAAGAAACTGCATTTACCAA+CGG 0.629023 1:-73017019 None:intergenic
AGTTTCTTCAAGTGATACCA+GGG 0.630530 1:+73017033 MsaT004712.1:CDS
TGATCCTGTAGATGGTAACA+AGG 0.631294 1:+73019198 MsaT004712.1:CDS
ATGGAAAGCTGACATTTCGA+AGG 0.635530 1:+73016679 MsaT004712.1:CDS
CACCTACAGAAGTAAAGGAT+AGG 0.637651 1:+73017167 MsaT004712.1:CDS
CCTGAACATGAATTGACCAC+AGG 0.638814 1:-73020120 None:intergenic
GTAAGGACTTCTTCAAGGAG+AGG 0.639071 1:+73013614 MsaT004712.1:CDS
TGGGAATGAATAGCGTTGGA+AGG 0.639308 1:+73021162 MsaT004712.1:CDS
ATGGTTCTCCGAATCTGGCG+AGG 0.639536 1:+73014278 MsaT004712.1:CDS
GGGCTATGATAACTTATCAA+GGG 0.641049 1:+73017054 MsaT004712.1:CDS
AGAATCTCTCCATCTCGCCA+CGG 0.641414 1:-73013665 None:intergenic
GCTACACAACATACCTGGTG+AGG 0.641555 1:-73014926 None:intergenic
GTTAGAGATGATGAATCTTG+GGG 0.642876 1:+73021296 MsaT004712.1:CDS
TCCCGGAAAGAGGAAGCTGA+TGG 0.643772 1:-73020359 None:intergenic
CCGGAAACTAACCAGGCGGT+CGG 0.644361 1:-73013735 None:intergenic
AGAAGATGTCACACATGCAG+TGG 0.646177 1:-73014656 None:intergenic
TTGGGGCTGATGGAACTACA+AGG 0.647188 1:-73014823 None:intergenic
AGATGTTGGAGGAAGATGGT+CGG 0.648607 1:+73014149 MsaT004712.1:CDS
GGTCGGCCGTTGGTTTCACG+GGG 0.649865 1:+73014166 MsaT004712.1:CDS
TGTTGTTGAGGCAGGCTCAG+TGG 0.652601 1:+73019564 MsaT004712.1:CDS
CGGTCGGCTGCGAAACTCGG+CGG 0.653759 1:-73013719 None:intergenic
TAAGTCACTCAAGTAGCTCG+AGG 0.655086 1:+73014548 MsaT004712.1:CDS
GAAACACCATAACCATGACC+AGG 0.655883 1:-73014112 None:intergenic
GTTCTCCGAATCTGGCGAGG+AGG 0.658080 1:+73014281 MsaT004712.1:CDS
TTGGAGAGGTCATTCGTGGG+AGG 0.658095 1:+73014249 MsaT004712.1:CDS
ACCAATTCTGACAAGTATGG+TGG 0.661106 1:+73021257 MsaT004712.1:CDS
ATGTCTTGAAAATGTAGATG+TGG 0.663001 1:+73019732 MsaT004712.1:CDS
AAGATATGAATAATGAGCAG+AGG 0.665208 1:+73014308 MsaT004712.1:CDS
TGACGTATGAGGCTTTCCAA+AGG 0.666473 1:-73020175 None:intergenic
AGATGATGCATGTGTTGTTG+AGG 0.666528 1:+73019552 MsaT004712.1:CDS
TTGGCTATTGAGAAAGAAAG+GGG 0.666838 1:+73018662 MsaT004712.1:CDS
AATGAATCAAGAGAAATCAG+TGG 0.670379 1:+73019700 MsaT004712.1:CDS
AAGAAGCCTAGGCTTAATTG+GGG 0.672278 1:+73014706 MsaT004712.1:CDS
GAACACTAACAGTCTCAACA+TGG 0.675115 1:-73020383 None:intergenic
GACCAGCATGCTAAGACGGG+TGG 0.676227 1:+73014409 MsaT004712.1:CDS
GTCTGGAAATAAAACAGACG+AGG 0.684383 1:+73019600 MsaT004712.1:CDS
GCGTGGATGATAAATTATTG+GGG 0.684514 1:+73016438 MsaT004712.1:CDS
CTACATAAATTAGTTGACTG+GGG 0.688710 1:-73016923 None:intergenic
ACTTGTTCAGATGAGAGCTG+CGG 0.689285 1:+73019298 MsaT004712.1:CDS
GAAGGTCATGGTAAGCAGGG+TGG 0.689827 1:+73014067 MsaT004712.1:intron
TCTTTGTCAACAACACATTG+GGG 0.691202 1:-73020009 None:intergenic
CCTTTGCCAAGAATAGTGAA+CGG 0.691999 1:+73020931 MsaT004712.1:CDS
TAGCATTCATGAAAATGACA+AGG 0.692115 1:+73016943 MsaT004712.1:CDS
CTAGTGGGAGGATCGTGCAG+CGG 0.694460 1:+73021194 MsaT004712.1:CDS
TTCAGGGAGGTAGAGATATG+CGG 0.697830 1:+73020310 MsaT004712.1:CDS
GTTTCTTCAAGTGATACCAG+GGG 0.700136 1:+73017034 MsaT004712.1:CDS
GCAGGTAATAAAAGGATACG+AGG 0.700512 1:+73018992 MsaT004712.1:CDS
AGGCCTGGGATTCTAGTGGG+AGG 0.700557 1:+73021182 MsaT004712.1:CDS
GGTAATGTAAAAGCATCAAG+GGG 0.700735 1:+73019034 MsaT004712.1:CDS
AAGTATGGTGGTCAAAACGG+AGG 0.720416 1:+73021269 MsaT004712.1:CDS
GCTGCGGCGAAGCTACTGAG+TGG 0.721566 1:+73019314 MsaT004712.1:CDS
TCTACTTGTGATATTCAGGG+AGG 0.726623 1:+73020297 MsaT004712.1:CDS
AAACTTATGTTCTAGCTACG+GGG 0.733759 1:+73017213 MsaT004712.1:CDS
TTTGGGCAGAGAGATTGGAG+AGG 0.734229 1:+73014235 MsaT004712.1:CDS
TTGAATGATGATGCAAATGG+CGG 0.738271 1:+73019517 MsaT004712.1:CDS
TGGGTGAGAGGAATATGTTG+GGG 0.738277 1:-73014344 None:intergenic
AGTCAAAATAGGATTCTGAG+TGG 0.758621 1:-73020616 None:intergenic
ATTTGCATCATCATTCAACG+GGG 0.778394 1:-73019512 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 73013586 73021343 73013586 ID=MsaG004712
Chr1 mRNA 73013586 73021343 73013586 ID=MsaT004712.1;Parent=MsaG004712
Chr1 exon 73013586 73013745 73013586 ID=MsaT004712.1.exon1;Parent=MsaT004712.1
Chr1 CDS 73013586 73013745 73013586 ID=cds.MsaT004712.1;Parent=MsaT004712.1
Chr1 exon 73014071 73014934 73014071 ID=MsaT004712.1.exon2;Parent=MsaT004712.1
Chr1 CDS 73014071 73014934 73014071 ID=cds.MsaT004712.1;Parent=MsaT004712.1
Chr1 exon 73016438 73017598 73016438 ID=MsaT004712.1.exon3;Parent=MsaT004712.1
Chr1 CDS 73016438 73017598 73016438 ID=cds.MsaT004712.1;Parent=MsaT004712.1
Chr1 exon 73018483 73018914 73018483 ID=MsaT004712.1.exon4;Parent=MsaT004712.1
Chr1 CDS 73018483 73018914 73018483 ID=cds.MsaT004712.1;Parent=MsaT004712.1
Chr1 exon 73018975 73021343 73018975 ID=MsaT004712.1.exon5;Parent=MsaT004712.1
Chr1 CDS 73018975 73021343 73018975 ID=cds.MsaT004712.1;Parent=MsaT004712.1
Gene Sequence

>MsaT004712.1

ATGCCGCCAGAACCATTGCCTTGGGATCGTAAGGACTTCTTCAAGGAGAGGAAGCACGAAAGGTCTGAATCGGTTGGCTCCGTGGCGAGATGGAGAGATTCTTCTCATCACCGAGATTTCAATCGTTGGGGATCCGCCGAGTTTCGCAGCCGACCGCCTGGTCATGGTAAGCAGGGTGGTTGGCACATGTTTTCTGAAGAGCCTGGTCATGGTTATGGTGTTTCTCGGTCCGGCGACAAGATGTTGGAGGAAGATGGTCGGCCGTTGGTTTCACGGGGTGATGGAAAATATGGCAGGAGTAGTAGGGATAATAGAGGAGGTCCCTTTGGGCAGAGAGATTGGAGAGGTCATTCGTGGGAGGCCAGCAATGGTTCTCCGAATCTGGCGAGGAGGCCGCAAGATATGAATAATGAGCAGAGGTCAGTTGATGATTCCCCAACATATTCCTCTCACCCACATTCTGATTTTGTAAACACTTGGGAGCAGCATAACTTGAAAGACCAGCATGCTAAGACGGGTGGTGTCAATGGGTTGGGAACAGGCCCAAGATGTGATAGAGAGAATTCTTTGAGTTCAATTGACTGGAAGCCGCTTAAATGGACCCGATCTGGAAGCTTGTCTTCTCGAGGCTCAGGTTTAAGTCACTCAAGTAGCTCGAGGAGCATGGCTGGGACAGATTCCTATGAAGGAAAGCCCAATTTGAAACACAAAAATGTCACTGCTGTTGAGTCGCATTCAGGGGAAGCCACTGCATGTGTGACATCTTCTATGCCGTCTGAAGATGCAACTTCTAGAAAGAAGCCTAGGCTTAATTGGGGCGAGGGACTCGCAAAGTACGAGAAGAAAAAAGTTGATGTACCTGATCCAGGATCAAACAAAGATGGCTCGGTTTCGTCTGCTGGTAATATGGAGCCTTGTAGTTCCATCAGCCCCAACTTGGTAGATAAAAGCCCAAAAGTTACAGGATTTTCAGACTGTGCATCTCCTGCAACTCCATCTTCCGTTGCCTGCAGTTCCTCACCAGGCGTGGATGATAAATTATTGGGGAAGGCTGGAAATGCAGACAATGATGTCAGTAATTTGACTGATTCACCTGCTCCTGGTTTTCAGAATCTCCTGCAGAAGTTTTATCTTAACCTTGATAAGTTGGATGTTGACTCCTTGAATAGTTTGGGCTCTTCAATTGTTGAGTTAGTACAGTCTGATGATCCAAGTTCTGACGATTCTGGTCTAGTTCGGACCAATGCTATTAATAAGTTGCTGATATGGAAAGCTGACATTTCGAAGGTATTGGAGATGACTGAATCTGAAATTGATTTGCTTGAAAATGAACTGAAGTCTCTAAAATCTGAATCTGTGGATAGATCTCAGTGTCCAGTAGCATCGGGCTCCCAGCAGGCAGATAGCAGTTCAAAGTTTTACGAACAGCGTGTTGAAGTCTCTCAGAAGGTCATTCGGCCAGTACCATTGAAAATTATTTCTTCTGATGAACCCAATACAGTGAAGATGCCCCAGTCAACTAATTTATGTAGCATTCATGAAAATGACAAGGAAGAGGATATCGATAGTCCTGGATCAGCAACTTCTAAATTTGTTGAGCCTCTGCCGTTGGTAAATGCAGTTTCTTCAAGTGATACCAGGGGCTATGATAACTTATCAAGGGACATGAATGCTGTTCAATCTACTATGATGAAATGCTTTGTCCGCTGTAATAGGAAAAATACTAGTGTATCTGCCTGTAATGATGTCAATACACCTACAGAAGTAAAGGATAGGTTGGGTGATGTTACCTTTGGAGCAAACTTATGTTCTAGCTACGGGGATACTTATAAGTCAATTATTGCTTCAAATAAAGAATCTGCAAACAGAGCGCACAAAGTATTTACCAAGTTAGTTCCCAAAGAATGTAAAAAGCATGGTAACATGGGAGTCAGCAATGATTCGTCCTCTCATACATTGATTGTGCAAAAATTTGCCGAGAAAAAACGGTTTGAAAGATTTAAGGAGAGAGTTATTGCACTCAAGTTCAAAGCCTTGCATCACTTGTGGAAAGAAGATATGCGCCTACTGTCTATTAGGAAATGCCGCCCAAGATCGCATAAGAAAAATGAACTAAATGTGCGAACTACCTGTAGCAGTAATATGAAGAACCGATCTTCCATTCGTTCACGGTTTACTTTCCCTGCTGGAAACCATCTAAGCTTGGTTCCAACAACAGAGATTATTAATTTCACAAGCAAACTTCTGTCAGAATCTCAAGCACAACTTCAGAGAAACACCTTGAAGATGCCTGCATTAATATTGGACGAGAAGGAGAAGATGGTTACAAAGTTCATATCTAGTAATGGGCTGGTTGAAGATCCGTTGGCTATTGAGAAAGAAAGGGGTATGATCAATCCTTGGACATCAGAAGAGAAAGAATTATTCTTGAAGAAATTTGCTGCATTTGGAAAAGATTTCCGGAAAATTGCTTCTTTCCTTGATCACAAGACAACTGCAGACTGCGTTGAGTTCTACTACAAGAACCACAAATCCGAATGTTTTGAGAAACTGAAGAGGAAAGATGTTGGTAAGCTAGGGAAGTCATATGCAGCTAAAACTAACTTGATGGCATCAGTGATGGCAGATGTCATTGCAGGTAATAAAAGGATACGAGGAAGATTCCTTCTGGGATATGGTAATGTAAAAGCATCAAGGGGCGAGGACAGCATTATAGAGAGATCAAACAGTTTTGACACTCTTGGGGATGAAAGGGAGACTGCTGCTGCAGCTGATGTATTGGCTGGTATATGTGGTTCATTTTCATCTGAGGCTATGAGTTCCTGCATAACAAGTTCAATTGATCCTGTAGATGGTAACAAGGAAACGAAGTTCTTGAAAGCAAACCCTATATTCAAACAACCCTTGACACCTGATATTTCACAGAATGCTGATGATGAGACTTGTTCAGATGAGAGCTGCGGCGAAGCTACTGAGTGGACAGATGATGAGACAGCAGCTTTTCTTCAGGCTGTATCATCTTTTGGTAAGGATTTTGCGAAGATATCACGGTGTGTAGGTACAAAGACCCAAGAACATTGTAAACGTTTCTTCAGCAAGACTCGGAAATGTCTTGGATTGAATCTTGAAAACCCCATACCTGGAATTAACGGATCCCCGTTGAATGATGATGCAAATGGCGGTGAGAGTGATACAGATGATGCATGTGTTGTTGAGGCAGGCTCAGTGGTTGATGCTGATAAGTCTGGAAATAAAACAGACGAGGACCTGCCTTCTGATGCCTTGAATACATTCCATGATGAATCCAATCCTCTGGAAGCTACGAGCCTGTCTGCTAAATTAAATGAATCAAGAGAAATCAGTGGGACCGAAGTATGTCTTGAAAATGTAGATGTGGCTTCCGTTGTTTGTGCAATTAATGTTGAATCTAAGCTAGGCTCTGATGTTAGTGGAGTTGGCTTGTGCACAACTGACAAGTCTGGTTCAGTCAATGGAGTTGGCTTGGGAGGTACAGTTAGAGAATCTATTTCTGCTTCAGAAATAATTAAACCAAGGGAGTGTGGTTCTGTTGCTTTGGATAGAACGGTTTCCGAGGGTTCTTCTGGGGGTCTTTGTCTTGGAAATGAAGTGGAAAGGCAAAGAGTGTCAGCACCCCAATGTGTTGTTGACAAAGATGTTAAACATATAGCAGATGCAGGTGTTGTAGTTGAGTTGAAAAGCTGTGTCTTAGAATCGAGCACTGCAGCAAATGTTTCATTCTCACCTGTGGTCAATTCATGTTCAGGATTGAGTTTTGGTTCTGAAAATAAGCATGTCTCCTTTGGAAAGCCTCATACGTCAGCACTGTCTATGAGTGATCTTCAGGCAACTGCAAATTCATTGTTGCTAAAAGCTGCCGCTGCTCAATGTGAGAAAACAGTTAGCCAGGATCGACTGTCCTCTACTTGTGATATTCAGGGAGGTAGAGATATGCGGTGTCATAGCTCTGGTAGTAATGGTGACCATCAGCTTCCTCTTTCCGGGAGCCATGTTGAGACTGTTAGTGTTCTCCAGGGCTATTCCATGCAGGTGCCCATAAAAAAAGAAGTGGATGGGGATGTGAATTGCAGCAGTTCAGCAGCTGAGTTTCCTCTTCGACCCCAAAAGGTCAAACAGACTGATGGTCATTTCAAATCATTATGGCATTCTTCGGATTCAGAAAAAACATCCAGAAATGGTGATGTGAAACTGTTTGGAAAGATATTAACCAATCCATCTTCCACTCAGAATCCTATTTTGACTGCGAAGCGAAGTGAAGAAAATGGTTCCCATCATCCCAAGTTGAACAACAAGTCTTCTAATCTGAATTTTACTGGCCATCAAATTTCTGATGAAAATTTAAAATTTTTGAAGTTTGGCCTTGAAAATGTTCCAGTGATGAGTTATGGTTATTGGGAAGGGAATGCAATACAAAGTAGACAGTCTGGTCTCCCATCCTTGCCCGACTCTTCTTTCTTGTTAGCTAAATATCCTGCTGCGTTTAGTAATTATCCTACATCATCTTCCAATTTGGAGCAACAGCCACCATTGCAGGCCTTTGCCAAGAATAGTGAACGGCATTTGACTGGTGCATCTACTTTTACAGCTAGAGACATGAATGGCAGCAATGCGATGATTGATTATCAGATGTTTAGAGGTAGAGATGGTCCACAAGTTCAGCCATTTATGGTTGATGTCCAACACCGACAAGATGTATTCTCTGAGATGCAGAGAAGAAACAGTTTTGAAGCAATCTCCAGCTTGCAGCAGCAAGGAAGGGGAATGATGGGAATGAATAGCGTTGGAAGGCCTGGGATTCTAGTGGGAGGATCGTGCAGCGGTGTCTCGGATCCTGTGGCGGCAATTAAAATGCATTATTCCACCAATTCTGACAAGTATGGTGGTCAAAACGGAGGTGTTGTTAGAGATGATGAATCTTGGGGAGGGAAAGGGGACTTAGGCAGGTAG

Protein sequence

>MsaT004712.1

MPPEPLPWDRKDFFKERKHERSESVGSVARWRDSSHHRDFNRWGSAEFRSRPPGHGKQGGWHMFSEEPGHGYGVSRSGDKMLEEDGRPLVSRGDGKYGRSSRDNRGGPFGQRDWRGHSWEASNGSPNLARRPQDMNNEQRSVDDSPTYSSHPHSDFVNTWEQHNLKDQHAKTGGVNGLGTGPRCDRENSLSSIDWKPLKWTRSGSLSSRGSGLSHSSSSRSMAGTDSYEGKPNLKHKNVTAVESHSGEATACVTSSMPSEDATSRKKPRLNWGEGLAKYEKKKVDVPDPGSNKDGSVSSAGNMEPCSSISPNLVDKSPKVTGFSDCASPATPSSVACSSSPGVDDKLLGKAGNADNDVSNLTDSPAPGFQNLLQKFYLNLDKLDVDSLNSLGSSIVELVQSDDPSSDDSGLVRTNAINKLLIWKADISKVLEMTESEIDLLENELKSLKSESVDRSQCPVASGSQQADSSSKFYEQRVEVSQKVIRPVPLKIISSDEPNTVKMPQSTNLCSIHENDKEEDIDSPGSATSKFVEPLPLVNAVSSSDTRGYDNLSRDMNAVQSTMMKCFVRCNRKNTSVSACNDVNTPTEVKDRLGDVTFGANLCSSYGDTYKSIIASNKESANRAHKVFTKLVPKECKKHGNMGVSNDSSSHTLIVQKFAEKKRFERFKERVIALKFKALHHLWKEDMRLLSIRKCRPRSHKKNELNVRTTCSSNMKNRSSIRSRFTFPAGNHLSLVPTTEIINFTSKLLSESQAQLQRNTLKMPALILDEKEKMVTKFISSNGLVEDPLAIEKERGMINPWTSEEKELFLKKFAAFGKDFRKIASFLDHKTTADCVEFYYKNHKSECFEKLKRKDVGKLGKSYAAKTNLMASVMADVIAGNKRIRGRFLLGYGNVKASRGEDSIIERSNSFDTLGDERETAAAADVLAGICGSFSSEAMSSCITSSIDPVDGNKETKFLKANPIFKQPLTPDISQNADDETCSDESCGEATEWTDDETAAFLQAVSSFGKDFAKISRCVGTKTQEHCKRFFSKTRKCLGLNLENPIPGINGSPLNDDANGGESDTDDACVVEAGSVVDADKSGNKTDEDLPSDALNTFHDESNPLEATSLSAKLNESREISGTEVCLENVDVASVVCAINVESKLGSDVSGVGLCTTDKSGSVNGVGLGGTVRESISASEIIKPRECGSVALDRTVSEGSSGGLCLGNEVERQRVSAPQCVVDKDVKHIADAGVVVELKSCVLESSTAANVSFSPVVNSCSGLSFGSENKHVSFGKPHTSALSMSDLQATANSLLLKAAAAQCEKTVSQDRLSSTCDIQGGRDMRCHSSGSNGDHQLPLSGSHVETVSVLQGYSMQVPIKKEVDGDVNCSSSAAEFPLRPQKVKQTDGHFKSLWHSSDSEKTSRNGDVKLFGKILTNPSSTQNPILTAKRSEENGSHHPKLNNKSSNLNFTGHQISDENLKFLKFGLENVPVMSYGYWEGNAIQSRQSGLPSLPDSSFLLAKYPAAFSNYPTSSSNLEQQPPLQAFAKNSERHLTGASTFTARDMNGSNAMIDYQMFRGRDGPQVQPFMVDVQHRQDVFSEMQRRNSFEAISSLQQQGRGMMGMNSVGRPGILVGGSCSGVSDPVAAIKMHYSTNSDKYGGQNGGVVRDDESWGGKGDLGR*