Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG004890 | XP_024642059.1 | 99.072 | 431 | 4 | 0 | 1 | 431 | 1 | 431 | 0.0 | 893 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG004890 | sp|Q75HX5|TLP8_ORYSJ | 75.556 | 450 | 86 | 8 | 1 | 431 | 1 | 445 | 0.0 | 649 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG004890 | tr|G7ICY3|G7ICY3_MEDTR | 99.072 | 431 | 4 | 0 | 1 | 431 | 1 | 431 | 0.0 | 893 |
Gene ID | Type | Classification |
---|---|---|
MsaG004890 | TF | TUB |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG000157 | MsaG004890 | 0.822357 | 4.358804e-53 | 1.020585e-50 |
MsaG000326 | MsaG004890 | 0.821990 | 5.297046e-53 | 1.228099e-50 |
MsaG000431 | MsaG004890 | 0.822689 | 3.652385e-53 | 8.628403e-51 |
MsaG000519 | MsaG004890 | 0.855805 | 9.555325e-62 | 6.355184e-59 |
MsaG000640 | MsaG004890 | 0.858020 | 2.141694e-62 | 1.545493e-59 |
MsaG000687 | MsaG004890 | 0.815566 | 1.500011e-51 | 2.941440e-49 |
MsaG001009 | MsaG004890 | 0.823084 | 2.956572e-53 | 7.059941e-51 |
MsaG001179 | MsaG004890 | 0.808025 | 6.452935e-50 | 1.050784e-47 |
MsaG001171 | MsaG004890 | 0.829793 | 7.578220e-55 | 2.180267e-52 |
MsaG001258 | MsaG004890 | 0.809999 | 2.449923e-50 | 4.183703e-48 |
MsaG001531 | MsaG004890 | 0.820453 | 1.193364e-52 | 2.656365e-50 |
MsaG001727 | MsaG004890 | 0.822318 | 4.448731e-53 | 1.040567e-50 |
MsaG002009 | MsaG004890 | 0.810207 | 2.210456e-50 | 3.793885e-48 |
MsaG002015 | MsaG004890 | 0.872345 | 7.004801e-67 | 8.971131e-64 |
MsaG002787 | MsaG004890 | 0.802461 | 9.321447e-49 | 1.332647e-46 |
MsaG002926 | MsaG004890 | 0.817939 | 4.428733e-52 | 9.229370e-50 |
MsaG003210 | MsaG004890 | 0.802648 | 8.535348e-49 | 1.225488e-46 |
MsaG003394 | MsaG004890 | 0.807743 | 7.403389e-50 | 1.197384e-47 |
MsaG003402 | MsaG004890 | 0.846318 | 4.406358e-59 | 2.109180e-56 |
MsaG003468 | MsaG004890 | 0.860427 | 4.093254e-63 | 3.235280e-60 |
MsaG004006 | MsaG004890 | 0.801256 | 1.643863e-48 | 2.286462e-46 |
MsaG004039 | MsaG004890 | 0.824726 | 1.223959e-53 | 3.055842e-51 |
MsaG004040 | MsaG004890 | 0.804749 | 3.140968e-49 | 4.734291e-47 |
MsaG004047 | MsaG004890 | 0.837571 | 8.815575e-57 | 3.190922e-54 |
MsaG004108 | MsaG004890 | 0.807955 | 6.678243e-50 | 1.085611e-47 |
MsaG004373 | MsaG004890 | 0.820694 | 1.051101e-52 | 2.354444e-50 |
MsaG004555 | MsaG004890 | 0.818570 | 3.193570e-52 | 6.764546e-50 |
MsaG004715 | MsaG004890 | 0.946951 | 5.379872e-105 | 9.374878e-100 |
MsaG004890 | MsaG005154 | 0.803853 | 4.818149e-49 | 7.112789e-47 |
MsaG004890 | MsaG005202 | 0.839276 | 3.217551e-57 | 1.227863e-54 |
MsaG004890 | MsaG005435 | 0.845251 | 8.556917e-59 | 3.953318e-56 |
MsaG004890 | MsaG005438 | 0.851472 | 1.659198e-60 | 9.461305e-58 |
MsaG004890 | MsaG005506 | 0.800923 | 1.920891e-48 | 2.651795e-46 |
MsaG004890 | MsaG005508 | 0.811546 | 1.137638e-50 | 2.017591e-48 |
MsaG004890 | MsaG005680 | 0.806343 | 1.460062e-49 | 2.284350e-47 |
MsaG004890 | MsaG005642 | 0.815958 | 1.227519e-51 | 2.431228e-49 |
MsaG004890 | MsaG005902 | 0.812634 | 6.607120e-51 | 1.203626e-48 |
MsaG004890 | MsaG005966 | 0.847332 | 2.333719e-59 | 1.155581e-56 |
MsaG004890 | MsaG006074 | 0.838481 | 5.155179e-57 | 1.919146e-54 |
MsaG004890 | MsaG006220 | 0.863041 | 6.553919e-64 | 5.729400e-61 |
MsaG004890 | MsaG006248 | 0.857863 | 2.382241e-62 | 1.709122e-59 |
MsaG004890 | MsaG006456 | 0.822262 | 4.583263e-53 | 1.070367e-50 |
MsaG004890 | MsaG006468 | 0.809036 | 3.934230e-50 | 6.564258e-48 |
MsaG004890 | MsaG006500 | 0.805052 | 2.716643e-49 | 4.123679e-47 |
MsaG004890 | MsaG006601 | 0.809106 | 3.801540e-50 | 6.353593e-48 |
MsaG004890 | MsaG006777 | 0.805653 | 2.036111e-49 | 3.134125e-47 |
MsaG004890 | MsaG006904 | 0.829398 | 9.444428e-55 | 2.686476e-52 |
MsaG004890 | MsaG007066 | 0.836457 | 1.692912e-56 | 5.924131e-54 |
MsaG004890 | MsaG007067 | 0.802775 | 8.036439e-49 | 1.157187e-46 |
MsaG004890 | MsaG007262 | 0.825105 | 9.967860e-54 | 2.514708e-51 |
MsaG004890 | MsaG007322 | 0.804385 | 3.737891e-49 | 5.586690e-47 |
MsaG004890 | MsaG007428 | 0.801421 | 1.520863e-48 | 2.123396e-46 |
MsaG004890 | MsaG007429 | 0.806264 | 1.516874e-49 | 2.368862e-47 |
MsaG004890 | MsaG007569 | 0.835337 | 3.245187e-56 | 1.098016e-53 |
MsaG004890 | MsaG007570 | 0.800551 | 2.286336e-48 | 3.129985e-46 |
MsaG004890 | MsaG007879 | 0.819142 | 2.370151e-52 | 5.096467e-50 |
MsaG004890 | MsaG007880 | 0.858108 | 2.017120e-62 | 1.460286e-59 |
MsaG004890 | MsaG007716 | 0.871002 | 1.942640e-66 | 2.348901e-63 |
MsaG004890 | MsaG007833 | 0.826452 | 4.791899e-54 | 1.254979e-51 |
MsaG004890 | MsaG007834 | 0.800384 | 2.471979e-48 | 3.371386e-46 |
MsaG004890 | MsaG007914 | 0.817036 | 7.061162e-52 | 1.437708e-49 |
MsaG004890 | MsaG008017 | 0.849406 | 6.270906e-60 | 3.330788e-57 |
MsaG004890 | MsaG008103 | 0.804518 | 3.508158e-49 | 5.259412e-47 |
MsaG004890 | MsaG008198 | 0.803492 | 5.719485e-49 | 8.373212e-47 |
MsaG004890 | MsaG008229 | 0.824983 | 1.065306e-53 | 2.678547e-51 |
MsaG004890 | MsaG008218 | 0.816919 | 7.496805e-52 | 1.521834e-49 |
MsaG004890 | MsaG008552 | 0.808826 | 4.361715e-50 | 7.240766e-48 |
MsaG004890 | MsaG008581 | 0.808298 | 5.647631e-50 | 9.256875e-48 |
MsaG004890 | MsaG009655 | 0.802847 | 7.768119e-49 | 1.120388e-46 |
MsaG004890 | MsaG010053 | 0.807876 | 6.940881e-50 | 1.126190e-47 |
MsaG004890 | MsaG010066 | 0.829854 | 7.323777e-55 | 2.110764e-52 |
MsaG004890 | MsaG010394 | 0.861742 | 1.636400e-63 | 1.359681e-60 |
MsaG004890 | MsaG010599 | 0.817681 | 5.061177e-52 | 1.047692e-49 |
MsaG004890 | MsaG010894 | 0.823493 | 2.375516e-53 | 5.735465e-51 |
MsaG004890 | MsaG010906 | 0.824945 | 1.087282e-53 | 2.730942e-51 |
MsaG004890 | MsaG011139 | 0.808959 | 4.085952e-50 | 6.804742e-48 |
MsaG004890 | MsaG011296 | 0.811740 | 1.033065e-50 | 1.840831e-48 |
MsaG004890 | MsaG011664 | 0.808658 | 4.736234e-50 | 7.830776e-48 |
MsaG004890 | MsaG011681 | 0.829433 | 9.262797e-55 | 2.637565e-52 |
MsaG004890 | MsaG012120 | 0.808104 | 6.208402e-50 | 1.012863e-47 |
MsaG004890 | MsaG012380 | 0.826512 | 4.637535e-54 | 1.216525e-51 |
MsaG004890 | MsaG012382 | 0.805605 | 2.083702e-49 | 3.203754e-47 |
MsaG004890 | MsaG012422 | 0.816160 | 1.107177e-51 | 2.204178e-49 |
MsaG004890 | MsaG012423 | 0.810732 | 1.705027e-50 | 2.964120e-48 |
MsaG004890 | MsaG012424 | 0.861488 | 1.955872e-63 | 1.609322e-60 |
MsaG004890 | MsaG012426 | 0.834653 | 4.816980e-56 | 1.596916e-53 |
MsaG004890 | MsaG012931 | 0.817797 | 4.767350e-52 | 9.898554e-50 |
MsaG004890 | MsaG013644 | 0.813517 | 4.239717e-51 | 7.896057e-49 |
MsaG004890 | MsaG013657 | 0.807637 | 7.794102e-50 | 1.257351e-47 |
MsaG004890 | MsaG013658 | 0.827888 | 2.179653e-54 | 5.941934e-52 |
MsaG004890 | MsaG013845 | 0.845146 | 9.132842e-59 | 4.204809e-56 |
MsaG004890 | MsaG013909 | 0.804844 | 3.001580e-49 | 4.534195e-47 |
MsaG004890 | MsaG013993 | 0.810597 | 1.823183e-50 | 3.159103e-48 |
MsaG004890 | MsaG014485 | 0.803605 | 5.420032e-49 | 7.955518e-47 |
MsaG004890 | MsaG014953 | 0.805751 | 1.942339e-49 | 2.996638e-47 |
MsaG004890 | MsaG014926 | 0.802249 | 1.030363e-48 | 1.465887e-46 |
MsaG004890 | MsaG014927 | 0.823967 | 1.841933e-53 | 4.504783e-51 |
MsaG004890 | MsaG015705 | 0.858337 | 1.724952e-62 | 1.259564e-59 |
MsaG004890 | MsaG016149 | 0.808203 | 5.915883e-50 | 9.674482e-48 |
MsaG004890 | MsaG016724 | 0.818932 | 2.644102e-52 | 5.654174e-50 |
MsaG004890 | MsaG016973 | 0.852049 | 1.140312e-60 | 6.636206e-58 |
MsaG004890 | MsaG017058 | 0.833259 | 1.071529e-55 | 3.408552e-53 |
MsaG004890 | MsaG017050 | 0.805073 | 2.689319e-49 | 4.084129e-47 |
MsaG004890 | MsaG017095 | 0.819933 | 1.567187e-52 | 3.440688e-50 |
MsaG004890 | MsaG017299 | 0.825523 | 7.946501e-54 | 2.028039e-51 |
MsaG004890 | MsaG017180 | 0.811826 | 9.894526e-51 | 1.766896e-48 |
MsaG004890 | MsaG017373 | 0.859730 | 6.631078e-63 | 5.103072e-60 |
MsaG004890 | MsaG017505 | 0.835446 | 3.045448e-56 | 1.033844e-53 |
MsaG004890 | MsaG017702 | 0.832614 | 1.547233e-55 | 4.829346e-53 |
MsaG004890 | MsaG017787 | 0.800302 | 2.568495e-48 | 3.496408e-46 |
MsaG004890 | MsaG017886 | 0.814843 | 2.166650e-51 | 4.171790e-49 |
MsaG004890 | MsaG018040 | 0.816275 | 1.043620e-51 | 2.083778e-49 |
MsaG004890 | MsaG018341 | 0.849818 | 4.815629e-60 | 2.593796e-57 |
MsaG004890 | MsaG018343 | 0.885479 | 1.693404e-71 | 3.969813e-68 |
MsaG004890 | MsaG018447 | 0.823082 | 2.959894e-53 | 7.067468e-51 |
MsaG004890 | MsaG018498 | 0.807950 | 6.694913e-50 | 1.088189e-47 |
MsaG004890 | MsaG018581 | 0.808528 | 5.046069e-50 | 8.316943e-48 |
MsaG004890 | MsaG018638 | 0.823033 | 3.038484e-53 | 7.245439e-51 |
MsaG004890 | MsaG019076 | 0.805390 | 2.310327e-49 | 3.534450e-47 |
MsaG004890 | MsaG019182 | 0.812942 | 5.660980e-51 | 1.039235e-48 |
MsaG004890 | MsaG019577 | 0.801257 | 1.642935e-48 | 2.285233e-46 |
MsaG004890 | MsaG019911 | 0.804489 | 3.556890e-49 | 5.328871e-47 |
MsaG004890 | MsaG019977 | 0.809348 | 3.376119e-50 | 5.675092e-48 |
MsaG004890 | MsaG020033 | 0.851302 | 1.852309e-60 | 1.050032e-57 |
MsaG004890 | MsaG020020 | 0.853093 | 5.763168e-61 | 3.478982e-58 |
MsaG004890 | MsaG020143 | 0.800626 | 2.207172e-48 | 3.026809e-46 |
MsaG004890 | MsaG020580 | 0.835641 | 2.720680e-56 | 9.289695e-54 |
MsaG004890 | MsaG020812 | 0.819982 | 1.527812e-52 | 3.358630e-50 |
MsaG004890 | MsaG020843 | 0.802929 | 7.472203e-49 | 1.079775e-46 |
MsaG004890 | MsaG020846 | 0.816709 | 8.353074e-52 | 1.686443e-49 |
MsaG004890 | MsaG020875 | 0.800464 | 2.381060e-48 | 3.253277e-46 |
MsaG004890 | MsaG021575 | 0.800831 | 2.005939e-48 | 2.763479e-46 |
MsaG004890 | MsaG021668 | 0.856209 | 7.287983e-62 | 4.919608e-59 |
MsaG004890 | MsaG021626 | 0.809389 | 3.309088e-50 | 5.568096e-48 |
MsaG004890 | MsaG021765 | 0.807293 | 9.213416e-50 | 1.474158e-47 |
MsaG004890 | MsaG021896 | 0.803909 | 4.691597e-49 | 6.934899e-47 |
MsaG004890 | MsaG022058 | 0.804267 | 3.955447e-49 | 5.895739e-47 |
MsaG004890 | MsaG022100 | 0.801565 | 1.421940e-48 | 1.991700e-46 |
MsaG004890 | MsaG022438 | 0.815968 | 1.221188e-51 | 2.419303e-49 |
MsaG004890 | MsaG022440 | 0.811049 | 1.457263e-50 | 2.553111e-48 |
MsaG004890 | MsaG023326 | 0.807526 | 8.226652e-50 | 1.323633e-47 |
MsaG004890 | MsaG023339 | 0.826120 | 5.745820e-54 | 1.490888e-51 |
MsaG004890 | MsaG023719 | 0.810240 | 2.174845e-50 | 3.735872e-48 |
MsaG004890 | MsaG023882 | 0.821614 | 6.466900e-53 | 1.484375e-50 |
MsaG004890 | MsaG023924 | 0.803501 | 5.695443e-49 | 8.339681e-47 |
MsaG004890 | MsaG023986 | 0.816780 | 8.055350e-52 | 1.629304e-49 |
MsaG004890 | MsaG024006 | 0.833083 | 1.184532e-55 | 3.748474e-53 |
MsaG004890 | MsaG024010 | 0.806574 | 1.305591e-49 | 2.053891e-47 |
MsaG004890 | MsaG024061 | 0.808542 | 5.013886e-50 | 8.266480e-48 |
MsaG004890 | MsaG024119 | 0.802847 | 7.767061e-49 | 1.120242e-46 |
MsaG004890 | MsaG024228 | 0.800185 | 2.711574e-48 | 3.681513e-46 |
MsaG004890 | MsaG025969 | 0.829164 | 1.075809e-54 | 3.039736e-52 |
MsaG004890 | MsaG026738 | 0.802284 | 1.013572e-48 | 1.443180e-46 |
MsaG004890 | MsaG026777 | 0.804517 | 3.509411e-49 | 5.261212e-47 |
MsaG004890 | MsaG026985 | 0.817808 | 4.740603e-52 | 9.845924e-50 |
MsaG004890 | MsaG027211 | 0.812205 | 8.188399e-51 | 1.475875e-48 |
MsaG004890 | MsaG027232 | 0.804622 | 3.337897e-49 | 5.016226e-47 |
MsaG004890 | MsaG027235 | 0.848365 | 1.215943e-59 | 6.232581e-57 |
MsaG004890 | MsaG027364 | 0.820725 | 1.034060e-52 | 2.318211e-50 |
MsaG004890 | MsaG027681 | 0.805189 | 2.543966e-49 | 3.873887e-47 |
MsaG004890 | MsaG027716 | 0.833188 | 1.115804e-55 | 3.542030e-53 |
MsaG004890 | MsaG028026 | 0.853151 | 5.549670e-61 | 3.356670e-58 |
MsaG004890 | MsaG028163 | 0.811239 | 1.325945e-50 | 2.333894e-48 |
MsaG004890 | MsaG028234 | 0.877997 | 8.394891e-69 | 1.381398e-65 |
MsaG004890 | MsaG028508 | 0.823628 | 2.210291e-53 | 5.356337e-51 |
MsaG004890 | MsaG028698 | 0.819894 | 1.599848e-52 | 3.508726e-50 |
MsaG004890 | MsaG029086 | 0.825263 | 9.154020e-54 | 2.319350e-51 |
MsaG004890 | MsaG029188 | 0.831760 | 2.510170e-55 | 7.643661e-53 |
MsaG004890 | MsaG029204 | 0.827392 | 2.863605e-54 | 7.698617e-52 |
MsaG004890 | MsaG029230 | 0.801843 | 1.247355e-48 | 1.758301e-46 |
MsaG004890 | MsaG029385 | 0.828889 | 1.253170e-54 | 3.513554e-52 |
MsaG004890 | MsaG029388 | 0.809945 | 2.515869e-50 | 4.290679e-48 |
MsaG004890 | MsaG029324 | 0.831388 | 3.097289e-55 | 9.328429e-53 |
MsaG004890 | MsaG029340 | 0.807521 | 8.248393e-50 | 1.326966e-47 |
MsaG004890 | MsaG029899 | 0.823159 | 2.840661e-53 | 6.796668e-51 |
MsaG004890 | MsaG029988 | 0.801901 | 1.214031e-48 | 1.713596e-46 |
MsaG004890 | MsaG030010 | 0.803590 | 5.459826e-49 | 8.011205e-47 |
MsaG004890 | MsaG030198 | 0.849412 | 6.246962e-60 | 3.318802e-57 |
MsaG004890 | MsaG030471 | 0.827941 | 2.117468e-54 | 5.780868e-52 |
MsaG004890 | MsaG030501 | 0.817643 | 5.162337e-52 | 1.067579e-49 |
MsaG004890 | MsaG031043 | 0.809459 | 3.196447e-50 | 5.388003e-48 |
MsaG004890 | MsaG032479 | 0.825800 | 6.839502e-54 | 1.758908e-51 |
MsaG004890 | MsaG032512 | 0.800610 | 2.224231e-48 | 3.049091e-46 |
MsaG004890 | MsaG033343 | 0.822221 | 4.685930e-53 | 1.093141e-50 |
MsaG004890 | MsaG033693 | 0.808975 | 4.055248e-50 | 6.756064e-48 |
MsaG004890 | MsaG034172 | 0.808946 | 4.112593e-50 | 6.847004e-48 |
MsaG004890 | MsaG034337 | 0.818711 | 2.966445e-52 | 6.306745e-50 |
MsaG004890 | MsaG034530 | 0.807981 | 6.592249e-50 | 1.072333e-47 |
MsaG004890 | MsaG034659 | 0.807841 | 7.057980e-50 | 1.144224e-47 |
MsaG004890 | MsaG034741 | 0.803641 | 5.329790e-49 | 7.829391e-47 |
MsaG004890 | MsaG034836 | 0.802372 | 9.720002e-49 | 1.386841e-46 |
MsaG004890 | MsaG035057 | 0.844130 | 1.709818e-58 | 7.614427e-56 |
MsaG004890 | MsaG035375 | 0.810160 | 2.262738e-50 | 3.879162e-48 |
MsaG004890 | MsaG035511 | 0.849445 | 6.115361e-60 | 3.252565e-57 |
MsaG004890 | MsaG035532 | 0.818764 | 2.886653e-52 | 6.145499e-50 |
MsaG004890 | MsaG035533 | 0.852403 | 9.054118e-61 | 5.334787e-58 |
MsaG004890 | MsaG035552 | 0.850158 | 3.872165e-60 | 2.109839e-57 |
MsaG004890 | MsaG035669 | 0.800286 | 2.586910e-48 | 3.520263e-46 |
MsaG004890 | MsaG035705 | 0.814133 | 3.106382e-51 | 5.875233e-49 |
MsaG004890 | MsaG036326 | 0.828058 | 1.984731e-54 | 5.436311e-52 |
MsaG004890 | MsaG037866 | 0.807658 | 7.715338e-50 | 1.245272e-47 |
MsaG004890 | MsaG038016 | 0.819698 | 1.772638e-52 | 3.867481e-50 |
MsaG004890 | MsaG038127 | 0.846669 | 3.538947e-59 | 1.713795e-56 |
MsaG004890 | MsaG038395 | 0.808159 | 6.044900e-50 | 9.874922e-48 |
MsaG004890 | MsaG038421 | 0.810415 | 1.994555e-50 | 3.440942e-48 |
MsaG004890 | MsaG039489 | 0.842389 | 4.955829e-58 | 2.086834e-55 |
MsaG004890 | MsaG039599 | 0.804790 | 3.080921e-49 | 4.648124e-47 |
MsaG004890 | MsaG039921 | 0.809590 | 2.997798e-50 | 5.069031e-48 |
MsaG004890 | MsaG039962 | 0.832605 | 1.555123e-55 | 4.852713e-53 |
MsaG004890 | MsaG040072 | 0.800711 | 2.121633e-48 | 2.915083e-46 |
MsaG004890 | MsaG040695 | 0.831096 | 3.652178e-55 | 1.090659e-52 |
MsaG004890 | MsaG040980 | 0.808124 | 6.148197e-50 | 1.003533e-47 |
MsaG004890 | MsaG041011 | 0.834972 | 4.006457e-56 | 1.340890e-53 |
MsaG004890 | MsaG041039 | 0.850175 | 3.832517e-60 | 2.089420e-57 |
MsaG004890 | MsaG041256 | 0.821046 | 8.729468e-53 | 1.973858e-50 |
MsaG004890 | MsaG041253 | 0.821203 | 8.034015e-53 | 1.824147e-50 |
MsaG004890 | MsaG041517 | 0.814153 | 3.074207e-51 | 5.817386e-49 |
MsaG004890 | MsaG041949 | 0.802121 | 1.094590e-48 | 1.552680e-46 |
MsaG004890 | MsaG041966 | 0.821168 | 8.185461e-53 | 1.856855e-50 |
MsaG004890 | MsaG042343 | 0.805652 | 2.036510e-49 | 3.134699e-47 |
MsaG004890 | MsaG042348 | 0.817721 | 4.956780e-52 | 1.027161e-49 |
MsaG004890 | MsaG042350 | 0.810939 | 1.538386e-50 | 2.687997e-48 |
MsaG004890 | MsaG042407 | 0.837560 | 8.875870e-57 | 3.211687e-54 |
MsaG004890 | MsaG042408 | 0.813771 | 3.728850e-51 | 6.989127e-49 |
MsaG004890 | MsaG042411 | 0.835046 | 3.840272e-56 | 1.288109e-53 |
MsaG004890 | MsaG042412 | 0.818548 | 3.229426e-52 | 6.836622e-50 |
MsaG004890 | MsaG042413 | 0.802322 | 9.953272e-49 | 1.418489e-46 |
MsaG004890 | MsaG043033 | 0.801004 | 1.849380e-48 | 2.557770e-46 |
MsaG004890 | MsaG043659 | 0.848805 | 9.195712e-60 | 4.784663e-57 |
MsaG004890 | MsaG043663 | 0.801940 | 1.191919e-48 | 1.683852e-46 |
MsaG004890 | MsaG044375 | 0.817343 | 6.026653e-52 | 1.236800e-49 |
MsaG004890 | MsaG044376 | 0.809109 | 3.796695e-50 | 6.345879e-48 |
MsaG004890 | MsaG044377 | 0.837792 | 7.743186e-57 | 2.821789e-54 |
MsaG004890 | MsaG044379 | 0.805527 | 2.162878e-49 | 3.319383e-47 |
MsaG004890 | MsaG044380 | 0.838318 | 5.678573e-57 | 2.103207e-54 |
MsaG004890 | MsaG044584 | 0.823372 | 2.534878e-53 | 6.100346e-51 |
MsaG004890 | MsaG044663 | 0.812337 | 7.667934e-51 | 1.386618e-48 |
MsaG004890 | MsaG044888 | 0.825024 | 1.041919e-53 | 2.622715e-51 |
MsaG004890 | MsaG045046 | 0.825019 | 1.044567e-53 | 2.629025e-51 |
MsaG004890 | MsaG045446 | 0.809664 | 2.889600e-50 | 4.894765e-48 |
MsaG004890 | MsaG045641 | 0.805820 | 1.878639e-49 | 2.903069e-47 |
MsaG004890 | MsaG045890 | 0.872959 | 4.376293e-67 | 5.755020e-64 |
MsaG004890 | MsaG046205 | 0.836803 | 1.382974e-56 | 4.890104e-54 |
MsaG004890 | MsaG046307 | 0.822112 | 4.965442e-53 | 1.154956e-50 |
MsaG004890 | MsaG046311 | 0.839024 | 3.737127e-57 | 1.415083e-54 |
MsaG004890 | MsaG046383 | 0.801958 | 1.181820e-48 | 1.670259e-46 |
MsaG004890 | MsaG046427 | 0.800250 | 2.630793e-48 | 3.577054e-46 |
MsaG004890 | MsaG046588 | 0.822323 | 4.437635e-53 | 1.038099e-50 |
MsaG004890 | MsaG046619 | 0.828482 | 1.569880e-54 | 4.351784e-52 |
MsaG004890 | MsaG046630 | 0.833648 | 8.580776e-56 | 2.760843e-53 |
MsaG004890 | MsaG046656 | 0.801432 | 1.513602e-48 | 2.113745e-46 |
MsaG004890 | MsaG046657 | 0.854691 | 2.007197e-61 | 1.282507e-58 |
MsaG004890 | MsaG046659 | 0.827649 | 2.486305e-54 | 6.732554e-52 |
MsaG004890 | MsaG046695 | 0.804604 | 3.366582e-49 | 5.057182e-47 |
MsaG004890 | MsaG046816 | 0.816386 | 9.857874e-52 | 1.973850e-49 |
MsaG004890 | MsaG046945 | 0.803152 | 6.721264e-49 | 9.762809e-47 |
MsaG004890 | MsaG047054 | 0.817636 | 5.181277e-52 | 1.071312e-49 |
MsaG004890 | MsaG047138 | 0.818420 | 3.451581e-52 | 7.282717e-50 |
MsaG004890 | MsaG004129 | 0.805967 | 1.749998e-49 | 2.713642e-47 |
MsaG004890 | MsaG002744 | 0.809321 | 3.422033e-50 | 5.748479e-48 |
MsaG004890 | MsaG002035 | 0.833468 | 9.511079e-56 | 3.044037e-53 |
MsaG004890 | MsaG007590 | 0.824059 | 1.752965e-53 | 4.297960e-51 |
MsaG004890 | MsaG009510 | 0.806522 | 1.338991e-49 | 2.103801e-47 |
MsaG004890 | MsaG011676 | 0.809794 | 2.710498e-50 | 4.605924e-48 |
MsaG004890 | MsaG014993 | 0.805664 | 2.025195e-49 | 3.118089e-47 |
MsaG004890 | MsaG012695 | 0.817189 | 6.524722e-52 | 1.333735e-49 |
MsaG004890 | MsaG019142 | 0.821873 | 5.636982e-53 | 1.302801e-50 |
MsaG004890 | MsaG019914 | 0.812188 | 8.259450e-51 | 1.488067e-48 |
MsaG004890 | MsaG019037 | 0.821989 | 5.298141e-53 | 1.228344e-50 |
MsaG004890 | MsaG020796 | 0.828581 | 1.486594e-54 | 4.132215e-52 |
MsaG004890 | MsaG020038 | 0.821948 | 5.415849e-53 | 1.254213e-50 |
MsaG004890 | MsaG018378 | 0.800582 | 2.253801e-48 | 3.087623e-46 |
MsaG004890 | MsaG024084 | 0.819778 | 1.700599e-52 | 3.718077e-50 |
MsaG004890 | MsaG023222 | 0.812552 | 6.882891e-51 | 1.251366e-48 |
MsaG004890 | MsaG028289 | 0.819618 | 1.848961e-52 | 4.025335e-50 |
MsaG004890 | MsaG027645 | 0.819841 | 1.644631e-52 | 3.601826e-50 |
MsaG004890 | MsaG028903 | 0.824167 | 1.654040e-53 | 4.067194e-51 |
MsaG004890 | MsaG031280 | 0.808212 | 5.890044e-50 | 9.634303e-48 |
MsaG004890 | MsaG032591 | 0.813711 | 3.844017e-51 | 7.193862e-49 |
MsaG004890 | MsaG033467 | 0.807171 | 9.775434e-50 | 1.559574e-47 |
MsaG004890 | MsaG032092 | 0.819799 | 1.681356e-52 | 3.678141e-50 |
MsaG004890 | MsaG032980 | 0.806459 | 1.380520e-49 | 2.165875e-47 |
MsaG004890 | MsaG032243 | 0.821165 | 8.198325e-53 | 1.859618e-50 |
MsaG004890 | MsaG032481 | 0.833472 | 9.486716e-56 | 3.036606e-53 |
MsaG004890 | MsaG031903 | 0.829622 | 8.335101e-55 | 2.386376e-52 |
MsaG004890 | MsaG034730 | 0.834364 | 5.688542e-56 | 1.869669e-53 |
MsaG004890 | MsaG032473 | 0.825139 | 9.790074e-54 | 2.472075e-51 |
MsaG004890 | MsaG033065 | 0.801016 | 1.839155e-48 | 2.544326e-46 |
MsaG004890 | MsaG038716 | 0.816728 | 8.269950e-52 | 1.670481e-49 |
MsaG004890 | MsaG038131 | 0.809808 | 2.691778e-50 | 4.575642e-48 |
MsaG004890 | MsaG035677 | 0.829899 | 7.142365e-55 | 2.061113e-52 |
MsaG004890 | MsaG035294 | 0.817005 | 7.173566e-52 | 1.459432e-49 |
MsaG004890 | MsaG035272 | 0.827843 | 2.234861e-54 | 6.084747e-52 |
MsaG004890 | MsaG036984 | 0.811614 | 1.100076e-50 | 1.954196e-48 |
MsaG004890 | MsaG042295 | 0.801057 | 1.804203e-48 | 2.498209e-46 |
MsaG004890 | MsaG041378 | 0.855450 | 1.211643e-61 | 7.956103e-59 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG004890 | MtrunA17_Chr1g0201891 | 99.072 | 431 | 4 | 0 | 1 | 431 | 1 | 431 | 0.0 | 893 |
MsaG004890 | MtrunA17_Chr2g0278511 | 80.230 | 435 | 74 | 5 | 1 | 431 | 1 | 427 | 0.0 | 702 |
MsaG004890 | MtrunA17_Chr2g0286441 | 58.333 | 384 | 136 | 5 | 48 | 431 | 34 | 393 | 4.49e-158 | 452 |
MsaG004890 | MtrunA17_Chr5g0404321 | 53.636 | 440 | 171 | 11 | 1 | 431 | 1 | 416 | 8.43e-155 | 444 |
MsaG004890 | MtrunA17_Chr8g0373001 | 51.936 | 439 | 176 | 12 | 1 | 431 | 1 | 412 | 2.89e-146 | 422 |
MsaG004890 | MtrunA17_Chr1g0155301 | 48.908 | 458 | 171 | 9 | 1 | 431 | 1 | 422 | 3.48e-146 | 422 |
MsaG004890 | MtrunA17_Chr1g0196071 | 51.030 | 437 | 173 | 10 | 1 | 431 | 1 | 402 | 1.92e-145 | 420 |
MsaG004890 | MtrunA17_Chr2g0315641 | 48.042 | 383 | 148 | 6 | 50 | 431 | 39 | 371 | 4.07e-120 | 354 |
MsaG004890 | MtrunA17_Chr2g0315651 | 43.636 | 385 | 161 | 10 | 51 | 431 | 35 | 367 | 2.34e-96 | 293 |
MsaG004890 | MtrunA17_Chr8g0373361 | 43.091 | 427 | 196 | 13 | 15 | 424 | 9 | 405 | 3.11e-94 | 289 |
MsaG004890 | MtrunA17_Chr8g0373331 | 36.092 | 435 | 180 | 17 | 1 | 424 | 1 | 348 | 1.04e-72 | 232 |
MsaG004890 | MtrunA17_Chr1g0156151 | 46.544 | 217 | 97 | 6 | 1 | 207 | 1 | 208 | 1.18e-56 | 186 |
MsaG004890 | MtrunA17_Chr8g0373351 | 32.398 | 392 | 130 | 12 | 48 | 423 | 14 | 286 | 1.07e-44 | 157 |
MsaG004890 | MtrunA17_Chr8g0373341 | 34.221 | 263 | 116 | 7 | 1 | 235 | 1 | 234 | 1.52e-28 | 114 |
MsaG004890 | MtrunA17_Chr8g0373341 | 45.098 | 102 | 41 | 3 | 322 | 421 | 232 | 320 | 6.76e-17 | 81.3 |
MsaG004890 | MtrunA17_Chr3g0091401 | 40.404 | 99 | 52 | 2 | 95 | 193 | 8 | 99 | 3.56e-14 | 68.6 |
MsaG004890 | MtrunA17_Chr2g0334041 | 24.561 | 285 | 128 | 9 | 155 | 430 | 153 | 359 | 2.52e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG004890 | AT1G76900.2 | 70.549 | 455 | 110 | 9 | 1 | 431 | 1 | 455 | 0.0 | 611 |
MsaG004890 | AT1G76900.1 | 70.549 | 455 | 110 | 9 | 1 | 431 | 1 | 455 | 0.0 | 611 |
MsaG004890 | AT1G76900.3 | 70.549 | 455 | 110 | 9 | 1 | 431 | 1 | 455 | 0.0 | 611 |
MsaG004890 | AT1G43640.1 | 67.800 | 441 | 120 | 6 | 1 | 431 | 1 | 429 | 0.0 | 599 |
MsaG004890 | AT1G25280.1 | 69.955 | 446 | 118 | 7 | 1 | 431 | 1 | 445 | 0.0 | 595 |
MsaG004890 | AT1G43640.2 | 69.786 | 374 | 95 | 4 | 65 | 431 | 1 | 363 | 0.0 | 535 |
MsaG004890 | AT2G47900.2 | 53.828 | 431 | 174 | 4 | 1 | 431 | 1 | 406 | 9.00e-166 | 472 |
MsaG004890 | AT2G47900.1 | 53.828 | 431 | 174 | 4 | 1 | 431 | 1 | 406 | 9.00e-166 | 472 |
MsaG004890 | AT2G47900.3 | 53.704 | 432 | 174 | 5 | 1 | 431 | 1 | 407 | 3.42e-164 | 468 |
MsaG004890 | AT2G18280.2 | 53.061 | 441 | 149 | 12 | 1 | 431 | 1 | 393 | 1.19e-149 | 431 |
MsaG004890 | AT2G18280.1 | 53.061 | 441 | 149 | 12 | 1 | 431 | 1 | 393 | 1.19e-149 | 431 |
MsaG004890 | AT1G47270.3 | 55.181 | 386 | 135 | 5 | 48 | 431 | 39 | 388 | 8.25e-142 | 410 |
MsaG004890 | AT1G47270.2 | 55.181 | 386 | 135 | 5 | 48 | 431 | 63 | 412 | 1.65e-141 | 410 |
MsaG004890 | AT1G47270.1 | 55.181 | 386 | 135 | 5 | 48 | 431 | 64 | 413 | 1.75e-141 | 410 |
MsaG004890 | AT5G18680.1 | 50.518 | 386 | 157 | 7 | 49 | 431 | 35 | 389 | 5.05e-130 | 380 |
MsaG004890 | AT3G06380.1 | 51.969 | 381 | 148 | 9 | 53 | 431 | 33 | 380 | 1.83e-127 | 374 |
MsaG004890 | AT1G25280.3 | 69.403 | 268 | 72 | 6 | 173 | 431 | 1 | 267 | 1.25e-122 | 357 |
MsaG004890 | AT1G25280.2 | 69.403 | 268 | 72 | 6 | 173 | 431 | 1 | 267 | 1.25e-122 | 357 |
MsaG004890 | AT1G53320.1 | 47.781 | 383 | 155 | 5 | 50 | 431 | 41 | 379 | 8.92e-119 | 352 |
MsaG004890 | AT5G18680.2 | 50.920 | 326 | 127 | 6 | 108 | 431 | 3 | 297 | 1.11e-105 | 315 |
MsaG004890 | AT3G06380.2 | 51.735 | 317 | 119 | 8 | 116 | 431 | 5 | 288 | 1.53e-99 | 299 |
MsaG004890 | AT1G61940.2 | 55.814 | 86 | 38 | 0 | 56 | 141 | 1 | 86 | 2.84e-28 | 112 |
MsaG004890 | AT1G61940.1 | 59.375 | 64 | 26 | 0 | 56 | 119 | 1 | 64 | 8.83e-20 | 88.6 |
Find 124 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAATGAGCTCTGGCTGGCC+TGG | 0.187108 | 1:+75198102 | None:intergenic |
ATACCCTCTCTCGGCCTTTC+AGG | 0.201509 | 1:-75197698 | MsaT004890.1:CDS |
GCAGCATTGCTTGTTGAAAA+TGG | 0.220754 | 1:-75198898 | MsaT004890.1:intron |
ATGTTGGTGCCTTAACTTTA+GGG | 0.281753 | 1:-75197899 | MsaT004890.1:CDS |
AATGTTGGTGCCTTAACTTT+AGG | 0.285851 | 1:-75197900 | MsaT004890.1:CDS |
CTTTCCGATGTAAGTGTTAC+TGG | 0.296608 | 1:+75198789 | None:intergenic |
CTGTAGGTTCTCAGATATAA+TGG | 0.306980 | 1:-75198007 | MsaT004890.1:CDS |
CTCACCTGCTTCAGAGAAAC+AGG | 0.315099 | 1:+75199733 | None:intergenic |
GAATGAGCTCTGGCTGGCCT+GGG | 0.345465 | 1:+75198103 | None:intergenic |
GCCAGCTGAGCATTGTTATA+GGG | 0.349030 | 1:+75198306 | None:intergenic |
CATGGGCTGTTCTGTATAAC+TGG | 0.352285 | 1:+75199928 | None:intergenic |
AGCCAGCTGAGCATTGTTAT+AGG | 0.353413 | 1:+75198305 | None:intergenic |
GTCGCTCCTCATGCCGCAAC+AGG | 0.364636 | 1:-75197814 | MsaT004890.1:CDS |
CGTGATGTGAGGGATGGATT+TGG | 0.379788 | 1:-75200042 | MsaT004890.1:CDS |
CTCTTCCTTTGCCTCAGTCC+TGG | 0.393245 | 1:-75199352 | MsaT004890.1:intron |
GAAAGAATCCTCAAGATTGC+GGG | 0.410283 | 1:+75198080 | None:intergenic |
CTCTGTGCAAGTCGTTCTTC+TGG | 0.410800 | 1:+75198849 | None:intergenic |
GCATGAGGAGCGACAGGTGC+AGG | 0.424142 | 1:+75197823 | None:intergenic |
TAACTGCCACTAGGGACCTT+TGG | 0.430993 | 1:+75198240 | None:intergenic |
TCCTATGAGTTGAATGTCCT+TGG | 0.431089 | 1:-75198201 | MsaT004890.1:CDS |
TCGTGATGTTATTAAGAGAT+TGG | 0.435663 | 1:-75199881 | MsaT004890.1:CDS |
TTTCCCTGTTTCTCTGAAGC+AGG | 0.440467 | 1:-75199737 | MsaT004890.1:intron |
TGCAGTTGTTCATGCCATCT+AGG | 0.445754 | 1:+75197922 | None:intergenic |
GACAAGATTATTCTTCAGTT+CGG | 0.446887 | 1:-75197757 | MsaT004890.1:CDS |
AATGCTCAGCTGGCTCCTCC+TGG | 0.452432 | 1:-75198297 | MsaT004890.1:CDS |
CCCGCTTCATCCCTCGAGCC+TGG | 0.453190 | 1:-75198135 | MsaT004890.1:CDS |
AAGGCTTCCTGGACATCAAA+GGG | 0.458001 | 1:-75199992 | MsaT004890.1:CDS |
CACAGAGTATGTTATATCAA+TGG | 0.458685 | 1:-75198833 | MsaT004890.1:CDS |
GAGCCTGGTGGTGTTGTCCC+AGG | 0.458781 | 1:-75198120 | MsaT004890.1:CDS |
TGTGCTGGCTGCGACGGAGC+AGG | 0.465017 | 1:+75197790 | None:intergenic |
TGGAAGCAACTGAGAGTACT+TGG | 0.468061 | 1:-75199861 | MsaT004890.1:CDS |
TGTAGGTTCTCAGATATAAT+GGG | 0.470818 | 1:-75198006 | MsaT004890.1:CDS |
AGATTGCGGGGAATGAGCTC+TGG | 0.475959 | 1:+75198093 | None:intergenic |
TGTATCATAAATTATGAACT+TGG | 0.479777 | 1:+75198335 | None:intergenic |
TCCCTATAACAATGCTCAGC+TGG | 0.484175 | 1:-75198307 | MsaT004890.1:CDS |
AAGGGGCAAGTCGCGTAGTT+CGG | 0.484348 | 1:-75199974 | MsaT004890.1:CDS |
TGCGGGGAATGAGCTCTGGC+TGG | 0.484831 | 1:+75198097 | None:intergenic |
GACTTGCCCCTTTGATGTCC+AGG | 0.489493 | 1:+75199985 | None:intergenic |
TTGTCATGGTCTGACTGTGC+TGG | 0.490534 | 1:+75197775 | None:intergenic |
CCAGGCTCGAGGGATGAAGC+GGG | 0.492821 | 1:+75198135 | None:intergenic |
TGAAGACGAGGAGGAGGGGA+AGG | 0.493522 | 1:-75197974 | MsaT004890.1:CDS |
TCACACGTCCCCTAAAGTTA+AGG | 0.494461 | 1:+75197890 | None:intergenic |
TGGCAATGAAGACGAGGAGG+AGG | 0.494605 | 1:-75197980 | MsaT004890.1:CDS |
ACCAAGGACATTCAACTCAT+AGG | 0.502804 | 1:+75198200 | None:intergenic |
TTGAATCTACGGCTGCGTCC+AGG | 0.511465 | 1:+75198279 | None:intergenic |
TTAAGAACAAGTCTCCTAGA+TGG | 0.514190 | 1:-75197936 | MsaT004890.1:CDS |
GTTGCGGCATGAGGAGCGAC+AGG | 0.514556 | 1:+75197817 | None:intergenic |
TCTGACTGTGCTGGCTGCGA+CGG | 0.514689 | 1:+75197784 | None:intergenic |
CATTCAACTCATAGGAGACC+TGG | 0.520501 | 1:+75198208 | None:intergenic |
GCAGGTCCTGTTGCGGCATG+AGG | 0.520662 | 1:+75197808 | None:intergenic |
TGGCCTGGGACAACACCACC+AGG | 0.526446 | 1:+75198117 | None:intergenic |
GAGGTTGATCATGCAACTCA+TGG | 0.527376 | 1:+75199950 | None:intergenic |
CAGGACTGAGGCAAAGGAAG+AGG | 0.529546 | 1:+75199353 | None:intergenic |
TTCTCAGATATAATGGGAGC+TGG | 0.533677 | 1:-75198000 | MsaT004890.1:CDS |
CCCATGGGCTAGCCTTCCAC+CGG | 0.534682 | 1:-75199911 | MsaT004890.1:CDS |
ACACTTACATCGGAAAGCTT+AGG | 0.535916 | 1:-75198783 | MsaT004890.1:intron |
GCGATGTTGTAACTGCCACT+AGG | 0.538385 | 1:+75198231 | None:intergenic |
GTAGTATTGTTCGTGATGTG+AGG | 0.542989 | 1:-75200053 | MsaT004890.1:CDS |
CACGAAGAAGCTCCGGTGGA+AGG | 0.548406 | 1:+75199899 | None:intergenic |
ACCAGGCTCGAGGGATGAAG+CGG | 0.552625 | 1:+75198134 | None:intergenic |
TCCGGTGGAAGGCTAGCCCA+TGG | 0.553438 | 1:+75199910 | None:intergenic |
TAAGGCTTCCTGGACATCAA+AGG | 0.555010 | 1:-75199993 | MsaT004890.1:CDS |
ATTCTTCAGTTCGGTAAAGT+CGG | 0.555879 | 1:-75197748 | MsaT004890.1:CDS |
TTCGTGGGCCTCTAGTACCA+AGG | 0.556399 | 1:+75198184 | None:intergenic |
GCTTACCAGGACTGAGGCAA+AGG | 0.556568 | 1:+75199347 | None:intergenic |
GCTCATTCCCCGCAATCTTG+AGG | 0.558110 | 1:-75198088 | MsaT004890.1:CDS |
TTACAGCCGGGGTATAGGGA+TGG | 0.560354 | 1:-75199424 | MsaT004890.1:intron |
ATAGTGCAATTCATCCTTCG+TGG | 0.560544 | 1:+75198168 | None:intergenic |
ACATATCGCAAAAGCCTGAA+AGG | 0.562316 | 1:+75197684 | None:intergenic |
ATAACATCACGAAGAAGCTC+CGG | 0.562691 | 1:+75199892 | None:intergenic |
GGACAACACCACCAGGCTCG+AGG | 0.563929 | 1:+75198124 | None:intergenic |
CGATGTTGTAACTGCCACTA+GGG | 0.565087 | 1:+75198232 | None:intergenic |
GTGCTGCGGTCTGCAAGTCG+TGG | 0.571719 | 1:-75199813 | MsaT004890.1:CDS |
GCAACTGAGAGTACTTGGCC+TGG | 0.572741 | 1:-75199856 | MsaT004890.1:CDS |
ATTGTTCGTGATGTGAGGGA+TGG | 0.573863 | 1:-75200048 | MsaT004890.1:CDS |
CCGGTGGAAGGCTAGCCCAT+GGG | 0.574926 | 1:+75199911 | None:intergenic |
TTGAATGTCCTTGGTACTAG+AGG | 0.577348 | 1:-75198192 | MsaT004890.1:CDS |
GGCAATGAAGACGAGGAGGA+GGG | 0.579076 | 1:-75197979 | MsaT004890.1:CDS |
ACTGAAGAATAATCTTGTCA+TGG | 0.579174 | 1:+75197761 | None:intergenic |
GGCATGAACAACTGCAATGT+TGG | 0.579920 | 1:-75197915 | MsaT004890.1:CDS |
GCAATGAAGACGAGGAGGAG+GGG | 0.583215 | 1:-75197978 | MsaT004890.1:CDS |
GACTTGTTCTTAAGAACTAG+AGG | 0.583735 | 1:+75197946 | None:intergenic |
GACTGAGGCAAAGGAAGAGG+TGG | 0.586469 | 1:+75199356 | None:intergenic |
TCAACACTCTTGAATACTGT+GGG | 0.587893 | 1:-75199768 | MsaT004890.1:CDS |
CAGTTATACAGAACAGCCCA+TGG | 0.589286 | 1:-75199927 | MsaT004890.1:CDS |
CGACGGAGCAGGTCCTGTTG+CGG | 0.591288 | 1:+75197801 | None:intergenic |
GGAAAGAATCCTCAAGATTG+CGG | 0.599386 | 1:+75198079 | None:intergenic |
TAGTGCAATTCATCCTTCGT+GGG | 0.600652 | 1:+75198169 | None:intergenic |
TGTTGGTGCCTTAACTTTAG+GGG | 0.601599 | 1:-75197898 | MsaT004890.1:CDS |
CAACTGAGTTTAGCAGCTGT+AGG | 0.602372 | 1:-75198023 | MsaT004890.1:CDS |
GTTATCGATCGATCGTGCAA+AGG | 0.614484 | 1:+75198047 | None:intergenic |
GACAACACCACCAGGCTCGA+GGG | 0.616356 | 1:+75198125 | None:intergenic |
GTCAACACTCTTGAATACTG+TGG | 0.616544 | 1:-75199769 | MsaT004890.1:CDS |
TAGTATTGTTCGTGATGTGA+GGG | 0.622920 | 1:-75200052 | MsaT004890.1:CDS |
GGACTATCGATACCCTCTCT+CGG | 0.623014 | 1:-75197707 | MsaT004890.1:CDS |
AAAGCCTGAAAGGCCGAGAG+AGG | 0.624015 | 1:+75197694 | None:intergenic |
TCAGTTCGGTAAAGTCGGCA+AGG | 0.626177 | 1:-75197743 | MsaT004890.1:CDS |
AGCTGAGCATTGTTATAGGG+AGG | 0.628040 | 1:+75198309 | None:intergenic |
GCAACCACATGCTTACGACC+AGG | 0.629724 | 1:+75199838 | None:intergenic |
AGATCCAGTAACACTTACAT+CGG | 0.632514 | 1:-75198793 | MsaT004890.1:CDS |
CAGGCTCGAGGGATGAAGCG+GGG | 0.635955 | 1:+75198136 | None:intergenic |
GCATGTGGTTGCTTGTGCTG+CGG | 0.636839 | 1:-75199827 | MsaT004890.1:CDS |
TGGCAGTTACAACATCGCCC+AGG | 0.637922 | 1:-75198226 | MsaT004890.1:CDS |
ATCGTGCAAAGGATAAACTA+CGG | 0.641987 | 1:+75198058 | None:intergenic |
ATTCAACTCATAGGAGACCT+GGG | 0.643668 | 1:+75198209 | None:intergenic |
ACATCACGAAGAAGCTCCGG+TGG | 0.646205 | 1:+75199895 | None:intergenic |
AAGCCTGAAAGGCCGAGAGA+GGG | 0.649007 | 1:+75197695 | None:intergenic |
CGGCAAGGATATGTTTACGA+TGG | 0.649091 | 1:-75197728 | MsaT004890.1:CDS |
GCTTCATCCCTCGAGCCTGG+TGG | 0.650835 | 1:-75198132 | MsaT004890.1:CDS |
AGCTGGCAATGAAGACGAGG+AGG | 0.651988 | 1:-75197983 | MsaT004890.1:CDS |
ATGGATTTGGAAGCTTATCG+AGG | 0.653763 | 1:-75200029 | MsaT004890.1:CDS |
GGGAGCTGGCAATGAAGACG+AGG | 0.656703 | 1:-75197986 | MsaT004890.1:CDS |
GGGCTGTTCTGTATAACTGG+AGG | 0.657426 | 1:+75199931 | None:intergenic |
AAAGAATCCTCAAGATTGCG+GGG | 0.658101 | 1:+75198081 | None:intergenic |
AGTTATACAGAACAGCCCAT+GGG | 0.669811 | 1:-75199926 | MsaT004890.1:CDS |
TTGGCCTGGTCGTAAGCATG+TGG | 0.677764 | 1:-75199842 | MsaT004890.1:CDS |
AATCTACGGCTGCGTCCAGG+AGG | 0.679597 | 1:+75198282 | None:intergenic |
GTTTCACCAAAGGTCCCTAG+TGG | 0.689726 | 1:-75198246 | MsaT004890.1:CDS |
GATTTGGAAGCTTATCGAGG+CGG | 0.694204 | 1:-75200026 | MsaT004890.1:CDS |
ATGGGTCCATCCCTATACCC+CGG | 0.704486 | 1:+75199418 | None:intergenic |
AGGCTTCCTGGACATCAAAG+GGG | 0.710405 | 1:-75199991 | MsaT004890.1:CDS |
AGTAAAGCTTACCAGGACTG+AGG | 0.714219 | 1:+75199341 | None:intergenic |
TCACCTGCTTCAGAGAAACA+GGG | 0.717293 | 1:+75199734 | None:intergenic |
TTGGTACTAGAGGCCCACGA+AGG | 0.736988 | 1:-75198182 | MsaT004890.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 75197648 | 75200085 | 75197648 | ID=MsaG004890 |
Chr1 | mRNA | 75197648 | 75200085 | 75197648 | ID=MsaT004890.1;Parent=MsaG004890 |
Chr1 | exon | 75197648 | 75198374 | 75197648 | ID=MsaT004890.1.exon4;Parent=MsaT004890.1 |
Chr1 | CDS | 75197648 | 75198374 | 75197648 | ID=cds.MsaT004890.1;Parent=MsaT004890.1 |
Chr1 | exon | 75198784 | 75198916 | 75198784 | ID=MsaT004890.1.exon3;Parent=MsaT004890.1 |
Chr1 | CDS | 75198784 | 75198916 | 75198784 | ID=cds.MsaT004890.1;Parent=MsaT004890.1 |
Chr1 | exon | 75199353 | 75199440 | 75199353 | ID=MsaT004890.1.exon2;Parent=MsaT004890.1 |
Chr1 | CDS | 75199353 | 75199440 | 75199353 | ID=cds.MsaT004890.1;Parent=MsaT004890.1 |
Chr1 | exon | 75199738 | 75200085 | 75199738 | ID=MsaT004890.1.exon1;Parent=MsaT004890.1 |
Chr1 | CDS | 75199738 | 75200085 | 75199738 | ID=cds.MsaT004890.1;Parent=MsaT004890.1 |
Gene Sequence |
Protein sequence |