AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG005195


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG005195 MtrunA17_Chr1g0205451 94.342 1679 42 4 1 1632 1 1673 0.0 3085
MsaG005195 MtrunA17_Chr1g0185491 44.048 672 324 16 385 1037 656 1294 9.72e-159 526
MsaG005195 MtrunA17_Chr2g0316251 39.543 569 307 11 527 1070 726 1282 3.44e-119 409
MsaG005195 MtrunA17_Chr3g0105291 39.855 414 236 8 560 967 603 1009 2.96e-84 301
MsaG005195 MtrunA17_Chr5g0430361 37.678 422 246 8 554 967 646 1058 1.01e-77 281
MsaG005195 MtrunA17_Chr7g0259981 38.245 319 166 6 660 975 11 301 4.93e-74 249
MsaG005195 MtrunA17_Chr5g0407211 35.431 429 243 6 560 966 3 419 9.69e-70 241
MsaG005195 MtrunA17_Chr5g0407251 35.198 429 244 6 560 966 3 419 1.51e-68 238
MsaG005195 MtrunA17_Chr7g0270101 36.104 385 237 5 559 940 383 761 4.27e-68 246
MsaG005195 MtrunA17_Chr3g0134821 31.712 514 298 11 467 966 358 832 4.17e-63 233
MsaG005195 MtrunA17_Chr3g0134811 34.954 329 197 5 644 966 474 791 7.75e-55 206
MsaG005195 MtrunA17_Chr1g0182481 29.680 438 241 10 575 966 477 893 4.23e-50 193
MsaG005195 MtrunA17_Chr4g0055731 30.879 421 221 14 557 966 108 469 2.31e-46 175
MsaG005195 MtrunA17_Chr7g0265211 28.409 440 243 9 585 966 522 947 8.29e-45 177
MsaG005195 MtrunA17_Chr1g0179841 27.232 448 254 7 575 964 367 800 3.92e-39 158
MsaG005195 MtrunA17_Chr3g0134851 26.521 411 198 9 597 972 129 470 2.00e-31 130
MsaG005195 MtrunA17_Chr4g0028111 25.229 436 228 10 607 973 187 593 1.21e-27 120
MsaG005195 MtrunA17_Chr4g0027811 25.843 445 212 12 576 967 200 579 2.81e-25 112
MsaG005195 MtrunA17_Chr2g0320451 36.424 151 93 2 815 964 873 1021 5.72e-22 103
MsaG005195 MtrunA17_Chr2g0320451 38.732 142 74 3 569 709 475 604 4.82e-21 100
MsaG005195 MtrunA17_Chr4g0025251 28.685 251 159 7 734 967 455 702 4.28e-21 100
MsaG005195 MtrunA17_Chr4g0025251 30.769 130 79 3 590 709 222 350 7.47e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG005195 AT4G14920.3 45.042 1079 465 27 4 1010 5 1027 0.0 795
MsaG005195 AT4G14920.2 44.949 1079 465 28 4 1010 5 1026 0.0 790
MsaG005195 AT4G14920.1 44.949 1079 465 28 4 1010 5 1026 0.0 790
MsaG005195 AT1G05380.3 44.366 994 441 28 26 981 21 940 0.0 702
MsaG005195 AT1G05380.1 44.366 994 441 28 26 981 21 940 0.0 702
MsaG005195 AT1G05380.2 44.366 994 441 28 26 981 21 940 0.0 702
MsaG005195 AT5G36740.5 44.426 592 256 10 384 969 428 952 8.46e-156 507
MsaG005195 AT5G36740.1 44.426 592 256 10 384 969 428 952 8.46e-156 507
MsaG005195 AT5G36740.4 43.543 604 254 11 384 969 275 809 1.17e-152 494
MsaG005195 AT5G36670.4 41.118 608 267 12 384 969 428 966 1.77e-139 462
MsaG005195 AT5G36670.5 41.118 608 267 12 384 969 428 966 1.77e-139 462
MsaG005195 AT5G36670.3 40.323 620 265 13 384 969 275 823 2.38e-136 450
MsaG005195 AT5G36670.1 40.323 620 265 13 384 969 428 976 1.70e-135 452
MsaG005195 AT5G36670.2 43.503 531 227 10 384 908 428 891 9.08e-133 436
MsaG005195 AT5G36740.2 43.503 531 227 10 384 908 428 891 9.08e-133 436
MsaG005195 AT5G36740.3 43.503 531 227 10 384 908 428 891 9.08e-133 436
MsaG005195 AT3G14980.5 40.000 475 262 8 504 971 525 983 2.56e-107 370
MsaG005195 AT3G14980.3 40.000 475 262 8 504 971 570 1028 3.97e-107 368
MsaG005195 AT3G14980.6 40.000 475 262 8 504 971 570 1028 5.26e-107 371
MsaG005195 AT3G14980.1 40.000 475 262 8 504 971 570 1028 5.26e-107 371
MsaG005195 AT3G14980.2 40.000 475 262 8 504 971 570 1028 5.26e-107 371
MsaG005195 AT5G58610.4 37.441 422 249 8 558 970 366 781 6.92e-81 287
MsaG005195 AT5G58610.3 37.441 422 249 8 558 970 597 1012 4.55e-79 286
MsaG005195 AT5G58610.8 37.441 422 249 8 558 970 597 1012 5.10e-79 284
MsaG005195 AT5G58610.2 37.441 422 249 8 558 970 597 1012 5.10e-79 284
MsaG005195 AT5G58610.7 37.441 422 249 8 558 970 588 1003 8.67e-79 285
MsaG005195 AT5G58610.5 37.441 422 249 8 558 970 588 1003 1.41e-78 284
MsaG005195 AT3G14980.4 37.533 381 215 8 504 877 570 934 8.54e-75 270
MsaG005195 AT5G58610.1 36.038 419 233 7 558 970 588 977 2.00e-73 268
MsaG005195 AT5G58610.6 36.038 419 233 7 558 970 588 977 2.02e-73 268
MsaG005195 AT5G58610.10 38.333 360 207 8 558 908 597 950 2.57e-67 248
MsaG005195 AT5G58610.9 38.333 360 207 8 558 908 588 941 7.00e-67 246
MsaG005195 AT5G58610.11 36.585 328 193 8 558 876 588 909 1.00e-54 208
MsaG005195 AT2G37520.1 29.478 441 242 10 575 964 391 813 7.30e-50 192
MsaG005195 AT3G53680.1 29.556 450 229 12 575 964 408 829 3.66e-47 184
MsaG005195 AT3G53680.2 29.556 450 229 12 575 964 410 831 4.17e-47 184
MsaG005195 AT2G36720.1 29.194 459 253 12 564 964 527 971 2.57e-44 176
MsaG005195 AT2G36720.2 29.194 459 253 12 564 964 527 971 2.57e-44 176
MsaG005195 AT2G27980.1 26.991 452 254 8 575 964 618 1055 3.56e-42 169
MsaG005195 AT5G63900.1 31.746 315 186 9 660 969 253 543 3.91e-40 158
MsaG005195 AT5G44800.1 50.980 51 23 1 658 706 70 120 5.02e-11 68.6

Find 430 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATTCATTGTTAATCTTAT+TGG 0.123742 1:+78768801 None:intergenic
CGCTATTATATAAACTATTA+TGG 0.181845 1:+78770777 None:intergenic
TAGAAAGCAAACAGAGTTTA+AGG 0.193152 1:-78773580 MsaT005195.1:CDS
TTCATACCAAACTCTTTAAA+AGG 0.207561 1:+78767485 None:intergenic
CAAAATTTACAGGTGCAATT+TGG 0.222617 1:+78771491 None:intergenic
AACAAAATCCGCTGAGAAAC+AGG 0.259130 1:-78773504 MsaT005195.1:CDS
TGATGACTTTGTTCCATATA+CGG 0.259162 1:-78772623 MsaT005195.1:CDS
ACGAGAATTGGTAGTCCTTC+TGG 0.267036 1:-78774388 MsaT005195.1:CDS
GTTTCTCAGTTGTAGCATTC+TGG 0.269926 1:+78772746 None:intergenic
GAGAATCCACCGCAGGATTT+TGG 0.280176 1:+78767312 None:intergenic
GAGAATCCGACACAGGATTT+TGG 0.283283 1:+78767744 None:intergenic
GAGAATCCGACACAGGATTT+TGG 0.283283 1:+78768392 None:intergenic
GTTAATCTTATTGGCAAGAT+TGG 0.287010 1:+78768810 None:intergenic
GAGAGTCTGACACAGGATTT+TGG 0.290731 1:+78767960 None:intergenic
CAGAACATATATTTAGATTC+TGG 0.291239 1:-78772403 MsaT005195.1:CDS
GATGCTTTGGGTGGTGGTGT+TGG 0.295661 1:-78774310 MsaT005195.1:CDS
ACTTCCTTGTTGCTTGATAA+AGG 0.295798 1:+78772825 None:intergenic
GGGAATCCGACACGGGATTT+TGG 0.298063 1:+78768176 None:intergenic
GATAATGACAGGGTTGGTTT+AGG 0.305091 1:-78773926 MsaT005195.1:CDS
GGTGGTGGTGTTGGTGGTGG+TGG 0.312387 1:-78774301 MsaT005195.1:CDS
TTCAGTCGGTTGAATTATAC+TGG 0.314381 1:-78769726 MsaT005195.1:CDS
GTTGTTATCTGTTTCTTCTC+TGG 0.322494 1:+78773467 None:intergenic
TGGAGTTGCACTCCACCCTC+TGG 0.322500 1:+78770876 None:intergenic
ATAGTAGGATGAAGATGAAT+AGG 0.333516 1:-78773754 MsaT005195.1:CDS
AGGGGAATGGGTTGGAGAGG+AGG 0.334613 1:-78774027 MsaT005195.1:CDS
AGAAACAGGGTTTACTTGTT+AGG 0.338544 1:-78773490 MsaT005195.1:CDS
TCTAAATATATGTTCTGATA+TGG 0.339232 1:+78772409 None:intergenic
TTGGGTGGTGGTGTTGGTGG+TGG 0.339894 1:-78774304 MsaT005195.1:CDS
GGCTAGTCCACAAAATTTAC+AGG 0.340018 1:+78771481 None:intergenic
TTGGAACTCGCCACATATAT+AGG 0.340838 1:-78769411 MsaT005195.1:CDS
TCTTTCCTCAGAATGAGATT+TGG 0.341013 1:+78768723 None:intergenic
ATGGTATGGTTGAGGGGAAT+GGG 0.342550 1:-78774039 MsaT005195.1:CDS
GCCTCCTCTGCCCTTGTTGA+AGG 0.343436 1:-78773720 MsaT005195.1:CDS
CCGCTAGAGGTAGTGTTGAT+AGG 0.344242 1:-78773874 MsaT005195.1:CDS
CTTTCCTGGTTGGTTGACTC+AGG 0.344300 1:-78772586 MsaT005195.1:CDS
CGGCAGATTAAAAGAACTTC+TGG 0.344718 1:-78772904 MsaT005195.1:CDS
ATAAGCAATCAAGGTTTATC+TGG 0.345632 1:-78768760 MsaT005195.1:CDS
GTGAAGAATAGAAGCTCTTC+GGG 0.347252 1:-78774358 MsaT005195.1:CDS
CAGGTAAGATCTGATTTAAA+TGG 0.348952 1:-78767119 MsaT005195.1:CDS
TTCGAAGAAAGTAAGGAAAA+AGG 0.349276 1:-78774254 MsaT005195.1:CDS
TGGAGCAGATTCGGCGTAAT+GGG 0.349349 1:-78774063 MsaT005195.1:CDS
TGACGAGTCCATTAGGGTTC+AGG 0.351852 1:-78773684 MsaT005195.1:CDS
ACTGTTCGTTTGCCCGTATA+TGG 0.353796 1:+78772610 None:intergenic
ATTAAGCCTGCTGTGGTCAA+TGG 0.360446 1:-78768889 MsaT005195.1:CDS
TTAAACCTGACGAGTCCATT+AGG 0.361937 1:-78773691 MsaT005195.1:CDS
CTGTTGCAGATGCTCCCTCC+TGG 0.363101 1:-78771527 MsaT005195.1:intron
GAAGGCTCTTTGCTCATTGA+AGG 0.365395 1:-78769216 MsaT005195.1:intron
TGCTGGTGAGAGTTCCTTGC+AGG 0.367836 1:-78767138 MsaT005195.1:CDS
TCGCCACATATATAGGAATC+AGG 0.370186 1:-78769404 MsaT005195.1:CDS
GAGGGAGAAGAAAGTTAAGT+TGG 0.370775 1:-78774008 MsaT005195.1:CDS
TCAGAGTTGCTTGGATATAC+AGG 0.371676 1:-78772209 MsaT005195.1:intron
CGAGAATTGGTAGTCCTTCT+GGG 0.372409 1:-78774387 MsaT005195.1:CDS
CTTCGGGGTGTTTGATTGTC+AGG 0.372717 1:-78774342 MsaT005195.1:CDS
TTCCATTCAGTAGATGTTGA+TGG 0.376210 1:-78772316 MsaT005195.1:CDS
TAATTTCTGCAGCATCTATC+AGG 0.376440 1:-78769668 MsaT005195.1:intron
AAACTCTGTTTGCTTTCTAC+TGG 0.378430 1:+78773584 None:intergenic
GCTTTGGGTGGTGGTGTTGG+TGG 0.379502 1:-78774307 MsaT005195.1:CDS
ACTATGTTCACCGCCATCTC+CGG 0.380257 1:+78773772 None:intergenic
CTCCTTCTAATTCTAGTCAT+GGG 0.380398 1:-78768669 MsaT005195.1:CDS
GAGAATCCGTAACAGGATTT+CGG 0.383109 1:+78767528 None:intergenic
TGCCGTCTGGTAGGAGGCTT+GGG 0.387330 1:-78774180 MsaT005195.1:CDS
CTCATTGAAGGTTGAGAAGC+TGG 0.387907 1:-78769204 MsaT005195.1:CDS
GGGAGAGGATGGAGCAGATT+CGG 0.389617 1:-78774072 MsaT005195.1:CDS
CTTGGCGAGGTTCTTGAAGC+TGG 0.389849 1:-78767887 MsaT005195.1:CDS
TAAACCTGACGAGTCCATTA+GGG 0.391952 1:-78773690 MsaT005195.1:CDS
GATGGTATGGTTGAGGGGAA+TGG 0.392853 1:-78774040 MsaT005195.1:CDS
TAGTAGGAAGAGGGAGAGGA+TGG 0.394484 1:-78774083 MsaT005195.1:CDS
GCAAACGAACAGTGCTTTCC+TGG 0.395555 1:-78772600 MsaT005195.1:CDS
GTTGATAGGGAAATTGAATC+TGG 0.400991 1:-78773860 MsaT005195.1:CDS
TGGTGAAATGAGTTGACATT+TGG 0.402188 1:+78768591 None:intergenic
TGTTTGATTGTCAGGAAGAA+GGG 0.404044 1:-78774334 MsaT005195.1:CDS
CCTTCACTCGACTTTGTAGT+TGG 0.404730 1:+78773284 None:intergenic
ATGCCGTCTGGTAGGAGGCT+TGG 0.405273 1:-78774181 MsaT005195.1:CDS
CAATGACACATCAATGAATC+TGG 0.407355 1:-78773387 MsaT005195.1:CDS
AAGAAAATCCTTGTCAAGTA+AGG 0.409824 1:-78773444 MsaT005195.1:CDS
CAACTCTGATGAAATGTTGA+TGG 0.409839 1:+78772223 None:intergenic
GGACTACCAATTCTCGTTCC+CGG 0.413496 1:+78774394 None:intergenic
TGGTGTTGGGTAGATGGAAC+CGG 0.414682 1:-78774413 None:intergenic
GTCACTTGAGAATCCGTAAC+AGG 0.417271 1:+78767521 None:intergenic
CCATTTGTAGAAGTATCATT+TGG 0.417588 1:+78768571 None:intergenic
TCCTTCCATGTAGGTTCTGA+GGG 0.417657 1:+78772707 None:intergenic
GATGAAAATGTAGATGTATC+TGG 0.418284 1:-78768037 MsaT005195.1:CDS
GGTGAAATGAGTTGACATTT+GGG 0.418392 1:+78768592 None:intergenic
CTCTTTGGCATTGTTCGCCT+CGG 0.418656 1:+78767631 None:intergenic
AGTCATGAAATCCGAGCTTT+GGG 0.419943 1:-78768526 MsaT005195.1:CDS
GCGTATTATGACAGGGCAAT+TGG 0.420749 1:-78773803 MsaT005195.1:CDS
TAATGGGGATGGTATGGTTG+AGG 0.421102 1:-78774047 MsaT005195.1:CDS
CATGTCGAGGTTCTTGAATC+TGG 0.422150 1:-78767671 MsaT005195.1:CDS
GACCTCATTTCTTGCCTAAG+TGG 0.426381 1:+78769113 None:intergenic
TTAGCAGAGATGCCATTCAT+TGG 0.426802 1:-78769430 MsaT005195.1:CDS
TAGTCATGAAATCCGAGCTT+TGG 0.430452 1:-78768527 MsaT005195.1:CDS
GGGGAATGGGTTGGAGAGGA+GGG 0.431647 1:-78774026 MsaT005195.1:CDS
TTCTGTAACATATCAATGCC+AGG 0.432048 1:+78769071 None:intergenic
GTGTTTGATTGTCAGGAAGA+AGG 0.432436 1:-78774335 MsaT005195.1:CDS
TTGAATATGTTGGTGTTCCC+TGG 0.435051 1:-78769089 MsaT005195.1:CDS
ATACCACAGGTATCATCATT+TGG 0.435118 1:+78772286 None:intergenic
ATGATTCGGAAGCAGCTAGT+AGG 0.437066 1:-78770907 MsaT005195.1:CDS
ATGGAACCGGGAACGAGAAT+TGG 0.438187 1:-78774400 MsaT005195.1:CDS
TGGTAGTCCTTCTGGGGTTG+TGG 0.444396 1:-78774380 MsaT005195.1:CDS
TCTCAAGATATAAGCAATCA+AGG 0.444665 1:-78768769 MsaT005195.1:CDS
TTCTTTGTCAGTAGTTGCCC+TGG 0.445722 1:+78771460 None:intergenic
AGTCGAGTGAAGGGAAAATC+AGG 0.448990 1:-78773274 MsaT005195.1:CDS
TGTTGCAGATGCTCCCTCCT+GGG 0.449595 1:-78771526 MsaT005195.1:intron
CTGAGCACATCATCAGCAAT+AGG 0.450446 1:+78773021 None:intergenic
TTCCTTCCATGTAGGTTCTG+AGG 0.450456 1:+78772706 None:intergenic
TTATCCTGTCTTAGGTTCCA+TGG 0.451223 1:-78769460 MsaT005195.1:intron
CATGTTGAGGTTGTTGAAGT+TGG 0.452754 1:-78768103 MsaT005195.1:CDS
TATCCTGTCTTAGGTTCCAT+GGG 0.453893 1:-78769459 MsaT005195.1:intron
AATGGTGAACTTGCATATGA+AGG 0.455129 1:-78767101 MsaT005195.1:CDS
AAACTCAACCATTCAATGCT+TGG 0.456332 1:+78766982 None:intergenic
AATGAAAATGTAGATGTCTC+TGG 0.457620 1:-78767821 MsaT005195.1:CDS
AATGAAAATGTAGATGTCTC+TGG 0.457620 1:-78768253 MsaT005195.1:CDS
TTGACTGAAAATGCTGTTAC+CGG 0.458865 1:-78772784 MsaT005195.1:CDS
AGATTAGTAGGAAGAGGGAG+AGG 0.459646 1:-78774087 MsaT005195.1:CDS
GGTGAAGAATAGAAGCTCTT+CGG 0.459986 1:-78774359 MsaT005195.1:CDS
TCTCCTTCTAATTCTAGTCA+TGG 0.460387 1:-78768670 MsaT005195.1:CDS
GTCTGGTAGGAGGCTTGGGC+CGG 0.460480 1:-78774176 MsaT005195.1:CDS
AACATTTCATCAGAGTTGCT+TGG 0.461037 1:-78772218 MsaT005195.1:CDS
GTGGTGGTAATGTTGGTGGC+GGG 0.461219 1:-78774111 MsaT005195.1:CDS
ATGACAGGGTTGGTTTAGGA+GGG 0.462187 1:-78773922 MsaT005195.1:CDS
ATGGAGCAGATTCGGCGTAA+TGG 0.463273 1:-78774064 MsaT005195.1:CDS
TGAGTTACTGTTCATATCAA+TGG 0.463556 1:+78767346 None:intergenic
TCTTTGGCATTGTTCCCCTC+AGG 0.464398 1:+78767203 None:intergenic
AAAAGAAGAACTCTCCCCTT+TGG 0.464651 1:+78773047 None:intergenic
CATGGTTGAACCTGCTTCTG+AGG 0.465736 1:-78768464 MsaT005195.1:CDS
ACCCCATGACTAGAATTAGA+AGG 0.468716 1:+78768667 None:intergenic
GTGAAGGTTTACAAGTTCAA+TGG 0.469904 1:+78769357 None:intergenic
TGATTCGGAAGCAGCTAGTA+GGG 0.470785 1:-78770906 MsaT005195.1:CDS
TTTGTTTCTAAGTGTGATGA+AGG 0.471100 1:+78773521 None:intergenic
GAAACTGGCGTAAATCCTTC+CGG 0.471329 1:-78767023 MsaT005195.1:CDS
CTTCACTCGACTTTGTAGTT+GGG 0.473279 1:+78773285 None:intergenic
AGAAAGCAAACAGAGTTTAA+GGG 0.474283 1:-78773579 MsaT005195.1:CDS
TCCTTTAGTGAATTCATCTC+AGG 0.474890 1:-78767864 MsaT005195.1:CDS
TCCTTTAGTGAATTCATCTC+AGG 0.474890 1:-78768296 MsaT005195.1:CDS
CCAAATGATACTTCTACAAA+TGG 0.475216 1:-78768571 MsaT005195.1:CDS
AGAACTTGAAGAAGTACCTT+GGG 0.475402 1:-78770985 MsaT005195.1:CDS
TTAAGCCTGCTGTGGTCAAT+GGG 0.475498 1:-78768888 MsaT005195.1:CDS
TTTCTGAACTTGTTCATACA+TGG 0.476724 1:-78769169 MsaT005195.1:CDS
CCATGAGGATCTTGCAAAGC+GGG 0.476873 1:+78768850 None:intergenic
CACATTGGAGTTGGCAAGAA+GGG 0.478528 1:+78771236 None:intergenic
ATTGGCTTGCATCCCGGAGA+TGG 0.478705 1:-78773785 MsaT005195.1:CDS
CATGTTGAGGTTCTCGAAGC+TGG 0.478921 1:-78768319 MsaT005195.1:CDS
TGGGGTTTCCCCTCAGAAGC+AGG 0.479051 1:+78768454 None:intergenic
TTTCCTGGTTGGTTGACTCA+GGG 0.479756 1:-78772585 MsaT005195.1:CDS
GCGGGGAGATTAGTAGGAAG+AGG 0.480215 1:-78774093 MsaT005195.1:CDS
AGTTCTGTTCTTAATCATGC+TGG 0.480932 1:-78767155 MsaT005195.1:CDS
AATGACAGGGTTGGTTTAGG+AGG 0.481926 1:-78773923 MsaT005195.1:CDS
TTTGGGTGATGGATCATTGA+TGG 0.481957 1:+78768609 None:intergenic
AGTATGATTCGAAGAAAGTA+AGG 0.483975 1:-78774261 MsaT005195.1:CDS
TCGTAGAACAAACGATGATT+CGG 0.484902 1:-78770921 MsaT005195.1:CDS
GGAGGCAGTTTGATAATGAC+AGG 0.486431 1:-78773937 MsaT005195.1:CDS
GTGGTGGTGGTTCGAGTTCG+CGG 0.486671 1:-78774288 MsaT005195.1:CDS
CGCTAGAGGTAGTGTTGATA+GGG 0.486702 1:-78773873 MsaT005195.1:CDS
CCACTTCTCCTATCAACAAC+AGG 0.486781 1:+78770812 None:intergenic
AATGGGGATGGTATGGTTGA+GGG 0.489872 1:-78774046 MsaT005195.1:CDS
AGATGCTCCCTCCTGGGGAA+TGG 0.490132 1:-78771520 MsaT005195.1:CDS
GGAGTTGCACTCCACCCTCT+GGG 0.490231 1:+78770877 None:intergenic
GACAGGGTTGGTTTAGGAGG+GGG 0.490843 1:-78773920 MsaT005195.1:CDS
CTATGTTCACCGCCATCTCC+GGG 0.490902 1:+78773773 None:intergenic
TAGTAGGATGAAGATGAATA+GGG 0.491031 1:-78773753 MsaT005195.1:CDS
TCCTTTAGTGAATTCGTTCG+AGG 0.491723 1:-78768080 MsaT005195.1:CDS
GAGATGGCGGTGAACATAGT+AGG 0.491811 1:-78773769 MsaT005195.1:CDS
GTCAGAAGGTTCAGTACCGC+AGG 0.492592 1:-78772549 MsaT005195.1:CDS
AAACTTGAGGGTAATACAAC+CGG 0.493948 1:-78769029 MsaT005195.1:CDS
GCAGACACACTGTGGATAAG+AGG 0.494407 1:-78773832 MsaT005195.1:CDS
AGGATGAGCGAGCGGCCAAA+GGG 0.494625 1:-78773062 MsaT005195.1:CDS
CACTTTATTAGTTCGTAACA+AGG 0.496032 1:-78772662 MsaT005195.1:CDS
GATGAAAATGTAGATGTCTC+TGG 0.496914 1:-78767605 MsaT005195.1:CDS
TTGAGGGGAATGGGTTGGAG+AGG 0.500330 1:-78774030 MsaT005195.1:CDS
TACCATCAACATCTACTGAA+TGG 0.500732 1:+78772314 None:intergenic
CAAGTTCATGCTTGGTCCCA+AGG 0.500748 1:+78770969 None:intergenic
GACGAGTCCATTAGGGTTCA+GGG 0.505754 1:-78773683 MsaT005195.1:CDS
TTGGTGGCGGGGAGATTAGT+AGG 0.507616 1:-78774099 MsaT005195.1:CDS
GCAGAGCAAGGAAAACTTGA+GGG 0.508800 1:-78769041 MsaT005195.1:CDS
CACTCAAACTATTACAAACT+CGG 0.510172 1:+78774146 None:intergenic
CGGGGAGATTAGTAGGAAGA+GGG 0.511726 1:-78774092 MsaT005195.1:CDS
AAGGAAAACTCGGAAGAAGA+TGG 0.513306 1:-78772989 MsaT005195.1:CDS
GCCTGCATCAAGTTCATGCT+TGG 0.514309 1:+78770961 None:intergenic
AGATGAAGAAGAAGAAGCAA+AGG 0.515126 1:-78772954 MsaT005195.1:CDS
TCTTCAAAAGCAATTGATTG+AGG 0.515543 1:-78773082 MsaT005195.1:CDS
TTCTCCTTCAACAAGGGCAG+AGG 0.517888 1:+78773716 None:intergenic
TTTGATATGAATGATTCCCT+TGG 0.518099 1:-78767905 MsaT005195.1:CDS
GTTGGGAACTTGTCATGTAC+AGG 0.518784 1:+78773302 None:intergenic
GGTCAGTGCAACAGCCAGCT+TGG 0.519968 1:+78770856 None:intergenic
GGTGGTGGTAATGTTGGTGG+CGG 0.520411 1:-78774112 MsaT005195.1:CDS
TCCTTCAACAAGGGCAGAGG+AGG 0.520472 1:+78773719 None:intergenic
AGATCATGACCGCTGCACTA+AGG 0.520728 1:-78771268 MsaT005195.1:CDS
TCGGCGTAATGGGGATGGTA+TGG 0.521228 1:-78774053 MsaT005195.1:CDS
TTACAAACTCGGATTGTCTC+CGG 0.521610 1:+78774157 None:intergenic
TGAGTATGATGGAGTAGGTA+AGG 0.524321 1:-78773969 MsaT005195.1:CDS
GAGTAGGTAAGGAAAGGATG+AGG 0.524377 1:-78773958 MsaT005195.1:CDS
TTTGGACAACGCCATTCCCC+AGG 0.524611 1:+78771509 None:intergenic
GGTTGACTCAGGGGTAGTAC+AGG 0.526768 1:-78772575 MsaT005195.1:CDS
TAAGGAAGACAGCAAGGGAA+AGG 0.528531 1:-78773426 MsaT005195.1:CDS
CATAATAGTTTATATAATAG+CGG 0.528567 1:-78770776 MsaT005195.1:CDS
TCCTTTAGTGAATTTGCCTG+AGG 0.528803 1:-78767219 MsaT005195.1:CDS
AGACAGCAAGGGAAAGGAGC+AGG 0.530400 1:-78773420 MsaT005195.1:CDS
CCCTCAGGCAAATTCACTAA+AGG 0.531261 1:+78767218 None:intergenic
CCCGCTTTGCAAGATCCTCA+TGG 0.531361 1:-78768850 MsaT005195.1:CDS
CAAACAGAGTTTAAGGGCTG+AGG 0.532224 1:-78773573 MsaT005195.1:CDS
CCCTTCAGTGAGTTCATCTG+AGG 0.532292 1:-78767432 MsaT005195.1:CDS
TAAATAATCAGCACCTTCAC+CGG 0.532915 1:+78769010 None:intergenic
AGCTTATTGGTCCATCATCA+AGG 0.533222 1:-78773115 MsaT005195.1:CDS
TATGGTTGAGGGGAATGGGT+TGG 0.533485 1:-78774035 MsaT005195.1:CDS
TTTCTAAGTGTGATGAAGGA+TGG 0.533710 1:+78773525 None:intergenic
TTCCCTGATTCCTATATATG+TGG 0.533756 1:+78769401 None:intergenic
GGTGGAGTGCAACTCCAAGC+TGG 0.534000 1:-78770870 MsaT005195.1:CDS
CAGGAGGAAGAAAGTAATGC+TGG 0.534163 1:-78772530 MsaT005195.1:CDS
CGAGGTGGTGGTAATGTTGG+TGG 0.534507 1:-78774115 MsaT005195.1:CDS
GATGACTTTGTTCCATATAC+GGG 0.534774 1:-78772622 MsaT005195.1:CDS
CATGTCGAGGTTCTTGAAGC+TGG 0.536459 1:-78767242 MsaT005195.1:CDS
AGGGCAATTGGCTTGCATCC+CGG 0.537695 1:-78773791 MsaT005195.1:CDS
TCCTTCTAATTCTAGTCATG+GGG 0.538290 1:-78768668 MsaT005195.1:CDS
CCTGTTGTTGATAGGAGAAG+TGG 0.538850 1:-78770812 MsaT005195.1:CDS
ATGTGGCGAGTTCCAATGAA+TGG 0.538851 1:+78769418 None:intergenic
GGGAAAGGAGCAGGATTCAG+AGG 0.540282 1:-78773411 MsaT005195.1:CDS
ATGGTGAACTTGCATATGAA+GGG 0.541446 1:-78767100 MsaT005195.1:CDS
ATAATAGTTTATATAATAGC+GGG 0.541633 1:-78770775 MsaT005195.1:intron
TGAACCCTAATGGACTCGTC+AGG 0.541907 1:+78773686 None:intergenic
ATGATGGAGTAGGTAAGGAA+AGG 0.542342 1:-78773964 MsaT005195.1:CDS
GAGAACTTGAAGAAGTACCT+TGG 0.542928 1:-78770986 MsaT005195.1:CDS
AATTCATATCAGTGAAAGCA+TGG 0.542955 1:+78768434 None:intergenic
GCCACTCGGGAATCCGACAC+GGG 0.543003 1:+78768169 None:intergenic
GGGGAGTTAGTGATGCCGTC+TGG 0.543743 1:-78774193 MsaT005195.1:CDS
ACCAAGCATGAACTTGATGC+AGG 0.544111 1:-78770962 MsaT005195.1:CDS
ACAGGATTTCGGTCATGCCC+TGG 0.546439 1:+78767539 None:intergenic
ACGAACAGTGCTTTCCTGGT+TGG 0.546850 1:-78772596 MsaT005195.1:CDS
GCCTCGGACAAATTCGCTAA+AGG 0.548533 1:+78767647 None:intergenic
GATGGTTAATAAGAAGAAGG+TGG 0.548717 1:-78773639 MsaT005195.1:CDS
ATGCTCTGACACATTGGAGT+TGG 0.549870 1:+78771227 None:intergenic
ATGAGTTGACATTTGGGTGA+TGG 0.550172 1:+78768598 None:intergenic
AGCATCATAGGCCTTGATGA+TGG 0.550380 1:+78773104 None:intergenic
TGACCGCTGCACTAAGGACA+TGG 0.551307 1:-78771262 MsaT005195.1:CDS
TAGGTAAGGAAAGGATGAGG+AGG 0.551778 1:-78773955 MsaT005195.1:CDS
CAGTTTGATAATGACAGGGT+TGG 0.551889 1:-78773932 MsaT005195.1:CDS
CGAGTGATTCAGAATCGAGC+GGG 0.552839 1:-78774213 MsaT005195.1:CDS
TGAACAAGTTCAGAAATTGC+AGG 0.553034 1:+78769176 None:intergenic
GGTGATGGTTAATAAGAAGA+AGG 0.553317 1:-78773642 MsaT005195.1:CDS
AATGAGGTCATTGAATATGT+TGG 0.553623 1:-78769099 MsaT005195.1:CDS
CCTGTGTCGGATTCTCAAGT+GGG 0.553790 1:-78767737 MsaT005195.1:CDS
GATGCTGAGCAATTTGAGAA+TGG 0.554115 1:-78768925 MsaT005195.1:CDS
CCATGTTCTTTACAGTAGCT+AGG 0.556120 1:+78768482 None:intergenic
GCATGACCGAAATCCTGTTA+CGG 0.556637 1:-78767534 MsaT005195.1:CDS
CAGTTGCTTGACCCAAAGCT+CGG 0.557532 1:+78768515 None:intergenic
GCTGTCTTCCTTACTTGACA+AGG 0.557539 1:+78773436 None:intergenic
AACTTGATGCAGGCTTTACA+TGG 0.557990 1:-78770952 MsaT005195.1:CDS
GCCTGAGATGAATTCACTAA+AGG 0.558076 1:+78767863 None:intergenic
GCCTGAGATGAATTCACTAA+AGG 0.558076 1:+78768295 None:intergenic
ACATGTCATTATCCGCCACT+CGG 0.559652 1:+78768155 None:intergenic
TCTAACCCATTGACCACAGC+AGG 0.559755 1:+78768883 None:intergenic
TGGTGGTAATGTTGGTGGCG+GGG 0.560173 1:-78774110 MsaT005195.1:CDS
CCCTCGAACGAATTCACTAA+AGG 0.560356 1:+78768079 None:intergenic
GATGATACCTGTGGTATATG+TGG 0.560544 1:-78772280 MsaT005195.1:CDS
GGCTGTTGCACTGACCGTGA+TGG 0.561103 1:-78770849 MsaT005195.1:CDS
AGAAAGTAATGCTGGAGGGA+TGG 0.561552 1:-78772522 MsaT005195.1:CDS
ATGGTTGAACCTGCTTCTGA+GGG 0.561744 1:-78768463 MsaT005195.1:CDS
CACATCTTGAGGAACCACTT+AGG 0.562132 1:-78769127 MsaT005195.1:CDS
CCCTCAGATGAACTCACTGA+AGG 0.562209 1:+78767431 None:intergenic
TTTACAGGTCAAACTTCAGT+CGG 0.562334 1:-78769740 MsaT005195.1:intron
CGCCACTCGGGAATCCGACA+CGG 0.562372 1:+78768168 None:intergenic
GTTTGATTGTCAGGAAGAAG+GGG 0.562596 1:-78774333 MsaT005195.1:CDS
CAACTTCAACAACCTCAACA+TGG 0.562639 1:+78768104 None:intergenic
GTCAAGTAAGGAAGACAGCA+AGG 0.562705 1:-78773432 MsaT005195.1:CDS
AATGACCCTCAGAACCTACA+TGG 0.563519 1:-78772712 MsaT005195.1:CDS
TCAAAGTTCGAGCTTCATGC+AGG 0.565026 1:-78772448 MsaT005195.1:CDS
CTGTTGTTGATAGGAGAAGT+GGG 0.565450 1:-78770811 MsaT005195.1:CDS
CAGATTCGGCGTAATGGGGA+TGG 0.565766 1:-78774058 MsaT005195.1:CDS
TCCTGTGTCGGATTCTCAAG+TGG 0.566185 1:-78767738 MsaT005195.1:CDS
CGCCACATATATAGGAATCA+GGG 0.566297 1:-78769403 MsaT005195.1:CDS
AGTGCTCTTGAGCGAGGTGG+TGG 0.566499 1:-78774127 MsaT005195.1:CDS
TTCTACAAATGGTCTTCCAT+CGG 0.566705 1:-78768560 MsaT005195.1:CDS
GTTGCAGATGCTCCCTCCTG+GGG 0.568272 1:-78771525 MsaT005195.1:intron
GGCTTGCATCCCGGAGATGG+CGG 0.569797 1:-78773782 MsaT005195.1:CDS
GTCAGTCTCAGCACTATCAC+CGG 0.570581 1:+78767004 None:intergenic
GGGCTGAGGGCACTTCTAAG+AGG 0.570925 1:-78773559 MsaT005195.1:CDS
ATTCATATCAGTGAAAGCAT+GGG 0.571063 1:+78768435 None:intergenic
GCCACTTGAGAATCCACCGC+AGG 0.571330 1:+78767305 None:intergenic
GTCAATTAACAAGGAAAACT+CGG 0.572356 1:-78772999 MsaT005195.1:CDS
CATGTCATTATCCGCCACTC+GGG 0.572554 1:+78768156 None:intergenic
GGAATCAGGGAATGTGCCGC+CGG 0.573151 1:-78769390 MsaT005195.1:CDS
CCTTTAGTGAATTCGTTCGA+GGG 0.574011 1:-78768079 MsaT005195.1:CDS
GAGGATGAGCGAGCGGCCAA+AGG 0.574037 1:-78773063 MsaT005195.1:CDS
ACCTGTGGTATATGTGGAGA+TGG 0.575292 1:-78772274 MsaT005195.1:CDS
TAGTGATGCCGTCTGGTAGG+AGG 0.576179 1:-78774186 MsaT005195.1:CDS
TGACAGGGTTGGTTTAGGAG+GGG 0.576223 1:-78773921 MsaT005195.1:CDS
GAGCGAGGTGGTGGTAATGT+TGG 0.576316 1:-78774118 MsaT005195.1:CDS
TGACTATCTGAGTGATCCGA+TGG 0.577926 1:+78768544 None:intergenic
TTCTTCACCACAACCCCAGA+AGG 0.579406 1:+78774373 None:intergenic
GGTGTTGGGTAGATGGAACC+GGG 0.579932 1:-78774412 None:intergenic
AAAGGAATGCTCTGACACAT+TGG 0.580699 1:+78771221 None:intergenic
GAGACTGACCAAGCATTGAA+TGG 0.582327 1:-78766990 MsaT005195.1:CDS
TTAAACTTCTCCTTCAACAA+GGG 0.582903 1:+78773710 None:intergenic
GATATGAATAATAATTCACC+AGG 0.583218 1:-78767557 MsaT005195.1:CDS
ACACATTGGAGTTGGCAAGA+AGG 0.585027 1:+78771235 None:intergenic
ATGGTTAATAAGAAGAAGGT+GGG 0.586213 1:-78773638 MsaT005195.1:CDS
CAACTACAAAGTCGAGTGAA+GGG 0.586684 1:-78773283 MsaT005195.1:CDS
TCCATCTCCACATATACCAC+AGG 0.588605 1:+78772273 None:intergenic
AGTTAGTGATGCCGTCTGGT+AGG 0.589318 1:-78774189 MsaT005195.1:CDS
CCTTTAGTGAATTTGCCTGA+GGG 0.589636 1:-78767218 MsaT005195.1:CDS
TTCCTGGTTGGTTGACTCAG+GGG 0.590106 1:-78772584 MsaT005195.1:CDS
TAAATCAGATCTTACCTGCA+AGG 0.590335 1:+78767124 None:intergenic
GTTAATAAGAAGAAGGTGGG+TGG 0.591496 1:-78773635 MsaT005195.1:CDS
CCTAGCTACTGTAAAGAACA+TGG 0.592814 1:-78768482 MsaT005195.1:CDS
CTTTAGTGAATTTGCCTGAG+GGG 0.593156 1:-78767217 MsaT005195.1:CDS
TACCCCTGAGTCAACCAACC+AGG 0.593171 1:+78772582 None:intergenic
GAGGGATGGATCACAAGAGA+AGG 0.593899 1:-78772508 MsaT005195.1:CDS
TAGGGGAGTCACCCAGAGGG+TGG 0.594341 1:-78770888 MsaT005195.1:CDS
TTGGGTGATGGATCATTGAT+GGG 0.595942 1:+78768610 None:intergenic
AGATGAACTCACTGAAGGGC+CGG 0.595962 1:+78767436 None:intergenic
AAGTGTGATGAAGGATGGAT+CGG 0.596760 1:+78773530 None:intergenic
TTAATAAGAAGAAGGTGGGT+GGG 0.597820 1:-78773634 MsaT005195.1:CDS
ACCCTCAGAACCTACATGGA+AGG 0.599339 1:-78772708 MsaT005195.1:CDS
GAGGGTAATACAACCGGTGA+AGG 0.600378 1:-78769023 MsaT005195.1:intron
AGGATGAAGATGAATAGGGA+TGG 0.602771 1:-78773749 MsaT005195.1:CDS
AAACAGAGTTTAAGGGCTGA+GGG 0.604380 1:-78773572 MsaT005195.1:CDS
AACTTCAACAACCTCAACAT+GGG 0.605269 1:+78768105 None:intergenic
TGCGGTGGATTCTCAAGTGG+CGG 0.605639 1:-78767303 MsaT005195.1:CDS
GGAGATTTAATCTGCTGTGA+TGG 0.605685 1:-78772250 MsaT005195.1:CDS
CACCCATGTCCTTAGTGCAG+CGG 0.605987 1:+78771259 None:intergenic
AGCTTCAAGAACCTCGCCAA+GGG 0.606699 1:+78767889 None:intergenic
TCCTTTAGCGAATTTGTCCG+AGG 0.606919 1:-78767648 MsaT005195.1:CDS
CCTCAGATGAACTCACTGAA+GGG 0.607985 1:+78767432 None:intergenic
CAGAAGCTTCTAGCAGAGCA+AGG 0.609901 1:-78769053 MsaT005195.1:CDS
TGTGATGAGGTTGTAGAAGC+CGG 0.610243 1:-78767455 MsaT005195.1:CDS
GGTAGTACAGGTAAGTCAGA+AGG 0.611372 1:-78772563 MsaT005195.1:CDS
AGAAGGTTCAGTACCGCAGG+AGG 0.611421 1:-78772546 MsaT005195.1:CDS
CAGCTTCGAGAACCTCAACA+TGG 0.611900 1:+78768320 None:intergenic
TTTGATGAGTATGATGGAGT+AGG 0.613215 1:-78773974 MsaT005195.1:CDS
ATGGGGATGGTATGGTTGAG+GGG 0.615259 1:-78774045 MsaT005195.1:CDS
CCAACTACAAAGTCGAGTGA+AGG 0.615291 1:-78773284 MsaT005195.1:CDS
CAGCTTCAAGAACCTCGACA+TGG 0.616163 1:+78767243 None:intergenic
CAGATTCAAGAACCTCGACA+TGG 0.616350 1:+78767672 None:intergenic
TATATGTTCTGATATGGCTG+AGG 0.616498 1:+78772415 None:intergenic
TCTCTGCTAACTTAGTCCCA+TGG 0.618156 1:+78769443 None:intergenic
GGAAGGAAAAGTAGAAAACA+TGG 0.618815 1:-78772691 MsaT005195.1:CDS
TTTGATTGTCAGGAAGAAGG+GGG 0.619581 1:-78774332 MsaT005195.1:CDS
TGTGTCGGATTCTCAAGTAG+TGG 0.620961 1:-78768383 MsaT005195.1:CDS
TCCTGCGGTGGATTCTCAAG+TGG 0.621253 1:-78767306 MsaT005195.1:CDS
TTTAAACTTCTCCTTCAACA+AGG 0.621456 1:+78773709 None:intergenic
GGGTTCTATTAAGCCTGCTG+TGG 0.622392 1:-78768896 MsaT005195.1:CDS
CCTTCAGTGAGTTCATCTGA+GGG 0.622558 1:-78767431 MsaT005195.1:CDS
GTGCTCCAAATCTCATTCTG+AGG 0.625528 1:-78768728 MsaT005195.1:CDS
GACAACGCCATTCCCCAGGA+GGG 0.625795 1:+78771513 None:intergenic
AGCTCCTTTATCAAGCAACA+AGG 0.626271 1:-78772829 MsaT005195.1:CDS
GATATGAATTGTGATTCCCC+AGG 0.628187 1:-78767773 MsaT005195.1:CDS
TGTGTCAGACTCTCAAGTGG+TGG 0.628367 1:-78767951 MsaT005195.1:CDS
TCTTGACCAAAATCCTGTGT+CGG 0.630072 1:-78768398 MsaT005195.1:CDS
GCAATTTGAGAATGGAGACG+TGG 0.630193 1:-78768917 MsaT005195.1:CDS
AGTTTGAGTGCTCTTGAGCG+AGG 0.630478 1:-78774133 MsaT005195.1:CDS
GTCTCAGCACTATCACCGGA+AGG 0.631549 1:+78767008 None:intergenic
TCCTGTGTCAGACTCTCAAG+TGG 0.632819 1:-78767954 MsaT005195.1:CDS
GCAAGATCCTCATGGAAGTG+AGG 0.633673 1:-78768842 MsaT005195.1:CDS
CAATTTGAGAATGGAGACGT+GGG 0.634220 1:-78768916 MsaT005195.1:CDS
TTCATATCAGTGAAAGCATG+GGG 0.634242 1:+78768436 None:intergenic
GCATTACTTTCTTCCTCCTG+CGG 0.634533 1:+78772533 None:intergenic
GGAGCAGATTCGGCGTAATG+GGG 0.634751 1:-78774062 MsaT005195.1:CDS
AACCACTTAGGCAAGAAATG+AGG 0.636144 1:-78769115 MsaT005195.1:CDS
ACTTGACCAAAATCCTGTGT+CGG 0.636890 1:-78767750 MsaT005195.1:CDS
TATGAATGATTCCCTTGGCG+AGG 0.638237 1:-78767900 MsaT005195.1:CDS
ATGTGCTCAGTCAATTAACA+AGG 0.638465 1:-78773008 MsaT005195.1:CDS
TACAGTGCCAGATAGATGCG+TGG 0.639281 1:-78772369 MsaT005195.1:CDS
AGCTTCAAGAACCTCGACAT+GGG 0.640445 1:+78767244 None:intergenic
GGAAAAGTAGAAAACATGGA+AGG 0.641351 1:-78772687 MsaT005195.1:CDS
CTTTAGTGAATTCGTTCGAG+GGG 0.641785 1:-78768078 MsaT005195.1:CDS
CAGCTTCAAGAACCTCGCCA+AGG 0.642345 1:+78767888 None:intergenic
AGCTTCGAGAACCTCAACAT+GGG 0.642446 1:+78768321 None:intergenic
GGATGAGCGAGCGGCCAAAG+GGG 0.643238 1:-78773061 MsaT005195.1:CDS
AGGATTGATGACATTGATAG+CGG 0.644594 1:-78772934 MsaT005195.1:CDS
TAGTAGGGGAGTCACCCAGA+GGG 0.645271 1:-78770891 MsaT005195.1:CDS
AGCAGAGCAAGGAAAACTTG+AGG 0.645794 1:-78769042 MsaT005195.1:CDS
CCCACTTGAGAATCCGACAC+AGG 0.646632 1:+78767737 None:intergenic
GAGAATTGGTAGTCCTTCTG+GGG 0.646751 1:-78774386 MsaT005195.1:CDS
GGAACAATGCACGCCGCTAG+AGG 0.648304 1:-78773887 MsaT005195.1:CDS
TCTTGACCAAAATCCTGCGG+TGG 0.648689 1:-78767318 MsaT005195.1:CDS
TCTGTAACATATCAATGCCA+GGG 0.648840 1:+78769072 None:intergenic
CTGTGTCGGATTCTCAAGTG+GGG 0.649252 1:-78767736 MsaT005195.1:CDS
ACTTTATTAGTTCGTAACAA+GGG 0.650281 1:-78772661 MsaT005195.1:CDS
ATCACCCCGCTCCAAAATAG+CGG 0.650643 1:+78769695 None:intergenic
ACAGTGCCAGATAGATGCGT+GGG 0.651131 1:-78772368 MsaT005195.1:CDS
ACAAAATCCGCTGAGAAACA+GGG 0.652180 1:-78773503 MsaT005195.1:CDS
TATGAATGATGCCCATGTTG+AGG 0.654727 1:-78768116 MsaT005195.1:CDS
TATGAATGATGCCCATGTTG+AGG 0.654727 1:-78768332 MsaT005195.1:CDS
TGTTACGGATTCTCAAGTGA+CGG 0.655586 1:-78767519 MsaT005195.1:CDS
TCAAGTAAGGAAGACAGCAA+GGG 0.655759 1:-78773431 MsaT005195.1:CDS
AGGAAGAAAGTAATGCTGGA+GGG 0.655950 1:-78772526 MsaT005195.1:CDS
CCTATCAACACTACCTCTAG+CGG 0.656629 1:+78773874 None:intergenic
GATATGAATTGTGATTCACC+AGG 0.656707 1:-78768205 MsaT005195.1:CDS
GGCCCAAGCCTCCTACCAGA+CGG 0.657096 1:+78774178 None:intergenic
GGACAACGCCATTCCCCAGG+AGG 0.661498 1:+78771512 None:intergenic
GAGGAAGAAAGTAATGCTGG+AGG 0.661994 1:-78772527 MsaT005195.1:CDS
ACCACTTGAGAGTCTGACAC+AGG 0.663535 1:+78767953 None:intergenic
CGTGTCGGATTCCCGAGTGG+CGG 0.663733 1:-78768167 MsaT005195.1:CDS
ACTACTTGAGAATCCGACAC+AGG 0.665932 1:+78768385 None:intergenic
GACCGCTGCACTAAGGACAT+GGG 0.667260 1:-78771261 MsaT005195.1:CDS
GATTCGGAAGCAGCTAGTAG+GGG 0.669456 1:-78770905 MsaT005195.1:CDS
GCTAGACCAAAATCCCGTGT+CGG 0.669834 1:-78768182 MsaT005195.1:CDS
TTGAGTGCTCTTGAGCGAGG+TGG 0.669938 1:-78774130 MsaT005195.1:CDS
ATTGATTGAGGATGAGCGAG+CGG 0.670575 1:-78773070 MsaT005195.1:CDS
TATGAATGATACCCATGTCG+AGG 0.673396 1:-78767255 MsaT005195.1:CDS
TATGAATGATACCCATGTCG+AGG 0.673396 1:-78767684 MsaT005195.1:CDS
AGATTCAAGAACCTCGACAT+GGG 0.676487 1:+78767673 None:intergenic
GATATGAACAGTAACTCACC+AGG 0.679687 1:-78767341 MsaT005195.1:CDS
GATGTGAATTGTGATTCACC+AGG 0.680299 1:-78767989 MsaT005195.1:CDS
TCGAGTGATTCAGAATCGAG+CGG 0.682645 1:-78774214 MsaT005195.1:CDS
GAGGCAGTTTGATAATGACA+GGG 0.685229 1:-78773936 MsaT005195.1:CDS
TCCCGTGTCGGATTCCCGAG+TGG 0.686587 1:-78768170 MsaT005195.1:CDS
TATGAATGATGTCTGTGATG+AGG 0.688787 1:-78767468 MsaT005195.1:CDS
TGGTTCAAGCAGACACACTG+TGG 0.691375 1:-78773840 MsaT005195.1:CDS
TGTGTCGGATTCTCAAGTGG+GGG 0.692340 1:-78767735 MsaT005195.1:CDS
CTAGTAGGGGAGTCACCCAG+AGG 0.692721 1:-78770892 MsaT005195.1:CDS
GATATGAATTGTGATTCACC+AGG 0.696700 1:-78768421 MsaT005195.1:CDS
TCCATGAGGATCTTGCAAAG+CGG 0.697072 1:+78768849 None:intergenic
ACATTGATAGCGGAAAAGAA+CGG 0.701762 1:-78772924 MsaT005195.1:CDS
AGGTCTTGACCAAAATCCTG+CGG 0.705499 1:-78767321 MsaT005195.1:CDS
GCTCGAACTTTGAAACTGTG+AGG 0.705555 1:+78772458 None:intergenic
TGGTTGAACCTGCTTCTGAG+GGG 0.706511 1:-78768462 MsaT005195.1:CDS
AAGTAAACCCTGTTTCTCAG+CGG 0.707883 1:+78773496 None:intergenic
TGTGGTATATGTGGAGATGG+AGG 0.708453 1:-78772271 MsaT005195.1:CDS
AGTGAAGGGAAAATCAGGCG+AGG 0.715224 1:-78773269 MsaT005195.1:intron
GAGTGATTCAGAATCGAGCG+GGG 0.717424 1:-78774212 MsaT005195.1:CDS
ATATGAATTGTGATTCACCA+GGG 0.718721 1:-78768204 MsaT005195.1:CDS
TGTTGTTGATAGGAGAAGTG+GGG 0.719238 1:-78770810 MsaT005195.1:CDS
CTAGCATCCTCACTTCCATG+AGG 0.724107 1:+78768835 None:intergenic
GATCCAAATGATGATACCTG+TGG 0.724451 1:-78772289 MsaT005195.1:CDS
ACAAGAGAAGGCATTCACTG+TGG 0.729027 1:-78772496 MsaT005195.1:CDS
CTTCAGTGAGTTCATCTGAG+GGG 0.729179 1:-78767430 MsaT005195.1:CDS
ACTGAAAATGCTGTTACCGG+TGG 0.733563 1:-78772781 MsaT005195.1:CDS
ATGTGAATTGTGATTCACCA+GGG 0.734028 1:-78767988 MsaT005195.1:CDS
TGAAGAATAGAAGCTCTTCG+GGG 0.761353 1:-78774357 MsaT005195.1:CDS
ATATGAATAATAATTCACCA+GGG 0.793367 1:-78767556 MsaT005195.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 78766986 78774422 78766986 ID=MsaG005195
Chr1 mRNA 78766986 78774422 78766986 ID=MsaT005195.1;Parent=MsaG005195
Chr1 exon 78766986 78768946 78766986 ID=MsaT005195.1.exon9;Parent=MsaT005195.1
Chr1 CDS 78766986 78768946 78766986 ID=cds.MsaT005195.1;Parent=MsaT005195.1
Chr1 exon 78769024 78769234 78769024 ID=MsaT005195.1.exon8;Parent=MsaT005195.1
Chr1 CDS 78769024 78769234 78769024 ID=cds.MsaT005195.1;Parent=MsaT005195.1
Chr1 exon 78769369 78769468 78769369 ID=MsaT005195.1.exon7;Parent=MsaT005195.1
Chr1 CDS 78769369 78769468 78769369 ID=cds.MsaT005195.1;Parent=MsaT005195.1
Chr1 exon 78769669 78769755 78769669 ID=MsaT005195.1.exon6;Parent=MsaT005195.1
Chr1 CDS 78769669 78769755 78769669 ID=cds.MsaT005195.1;Parent=MsaT005195.1
Chr1 exon 78770776 78771014 78770776 ID=MsaT005195.1.exon5;Parent=MsaT005195.1
Chr1 CDS 78770776 78771014 78770776 ID=cds.MsaT005195.1;Parent=MsaT005195.1
Chr1 exon 78771200 78771288 78771200 ID=MsaT005195.1.exon4;Parent=MsaT005195.1
Chr1 CDS 78771200 78771288 78771200 ID=cds.MsaT005195.1;Parent=MsaT005195.1
Chr1 exon 78771408 78771540 78771408 ID=MsaT005195.1.exon3;Parent=MsaT005195.1
Chr1 CDS 78771408 78771540 78771408 ID=cds.MsaT005195.1;Parent=MsaT005195.1
Chr1 exon 78772210 78773135 78772210 ID=MsaT005195.1.exon2;Parent=MsaT005195.1
Chr1 CDS 78772210 78773135 78772210 ID=cds.MsaT005195.1;Parent=MsaT005195.1
Chr1 exon 78773270 78774422 78773270 ID=MsaT005195.1.exon1;Parent=MsaT005195.1
Chr1 CDS 78773270 78774422 78773270 ID=cds.MsaT005195.1;Parent=MsaT005195.1
Gene Sequence

>MsaT005195.1

ATGGAACCGGGAACGAGAATTGGTAGTCCTTCTGGGGTTGTGGTGAAGAATAGAAGCTCTTCGGGGTGTTTGATTGTCAGGAAGAAGGGGGATGCTTTGGGTGGTGGTGTTGGTGGTGGTGGTTCGAGTTCGCGGAAGCAGTATGATTCGAAGAAAGTAAGGAAAAAGGTGAAGGTGGAGGTTGATTCGAGTGATTCAGAATCGAGCGGGGAGTTAGTGATGCCGTCTGGTAGGAGGCTTGGGCCGGAGACAATCCGAGTTTGTAATAGTTTGAGTGCTCTTGAGCGAGGTGGTGGTAATGTTGGTGGCGGGGAGATTAGTAGGAAGAGGGAGAGGATGGAGCAGATTCGGCGTAATGGGGATGGTATGGTTGAGGGGAATGGGTTGGAGAGGAGGGAGAAGAAAGTTAAGTTGGATGTGTTTGATTTTGATGAGTATGATGGAGTAGGTAAGGAAAGGATGAGGAGGCAGTTTGATAATGACAGGGTTGGTTTAGGAGGGGGAAGGTTTATGGGAACAATGCACGCCGCTAGAGGTAGTGTTGATAGGGAAATTGAATCTGGTTCAAGCAGACACACTGTGGATAAGAGGAAAAAAGCGTATTATGACAGGGCAATTGGCTTGCATCCCGGAGATGGCGGTGAACATAGTAGGATGAAGATGAATAGGGATGGAACTCAGCCTCCTCTGCCCTTGTTGAAGGAGAAGTTTAAACCTGACGAGTCCATTAGGGTTCAGGGAAAAAATGGTGTTTTGAAGGTGATGGTTAATAAGAAGAAGGTGGGTGGGTCAGTAGAACGCTATGAACAACGTAAACCAGTAGAAAGCAAACAGAGTTTAAGGGCTGAGGGCACTTCTAAGAGGAGTGTTCCGATCCATCCTTCATCACACTTAGAAACAAAATCCGCTGAGAAACAGGGTTTACTTGTTAGGCCAGAGAAGAAACAGATAACAACAAGAAAATCCTTGTCAAGTAAGGAAGACAGCAAGGGAAAGGAGCAGGATTCAGAGGACAATGACACATCAATGAATCTGGAAGTAAAAAATATTAAAGCTCACACACCTTCAAAAAAGATAACCTCTGAAAATGAACAGACTCCTGTACATGACAAGTTCCCAACTACAAAGTCGAGTGAAGGGAAAATCAGGCGAGCTTATTGGTCCATCATCAAGGCCTATGATGCTCTTCAAAAGCAATTGATTGAGGATGAGCGAGCGGCCAAAGGGGAGAGTTCTTCTTTTGCTCCTATTGCTGATGATGTGCTCAGTCAATTAACAAGGAAAACTCGGAAGAAGATGGAGAAAGATTTGAAGATGAAGAAGAAGAAGCAAAGGATTGATGACATTGATAGCGGAAAAGAACGGCAGATTAAAAGAACTTCTGGCAAAAAGCATCACATGAATAGCATTGATAGTGATAGCAATGAAGACAAGTTAAGCTCCTTTATCAAGCAACAAGGAAGTAAATCGATGAAAGCTAAATTGACTGAAAATGCTGTTACCGGTGGTAGCTCTAAAAGCCAGAATGCTACAACTGAGAAACCATTCTCTGAAAATGACCCTCAGAACCTACATGGAAGGAAAAGTAGAAAACATGGAAGGTGCACTTTATTAGTTCGTAACAAGGGATTGAATTCAGAATCTGATGACTTTGTTCCATATACGGGCAAACGAACAGTGCTTTCCTGGTTGGTTGACTCAGGGGTAGTACAGGTAAGTCAGAAGGTTCAGTACCGCAGGAGGAAGAAAGTAATGCTGGAGGGATGGATCACAAGAGAAGGCATTCACTGTGGCTGCTGTAGTAAGATCCTCACAGTTTCAAAGTTCGAGCTTCATGCAGGAAGCAAATTGCCTCAGCCATATCAGAACATATATTTAGATTCTGGAGTTTCTCTTCTACAGTGCCAGATAGATGCGTGGGAAAAACAAGAGAATTCTGGGAAAATCAGTTTCCATTCAGTAGATGTTGATGGTAACGATCCAAATGATGATACCTGTGGTATATGTGGAGATGGAGGAGATTTAATCTGCTGTGATGGTTGTCCATCAACATTTCATCAGAGTTGCTTGGATATACAGATGCTCCCTCCTGGGGAATGGCGTTGTCCAAATTGCACCTGTAAATTTTGTGGACTAGCCAGGGCAACTACTGACAAAGAAGATGATGCAACTGTAAATGCTCTACGTACTTGTGACTTGTGCGAGAAAAAATATCATGACCGCTGCACTAAGGACATGGGTGCCCTTCTTGCCAACTCCAATGTGTCAGAGCATTCCTTTTGTGGAAAAAGCTGCAAAGAGCTTTTTGAGAACTTGAAGAAGTACCTTGGGACCAAGCATGAACTTGATGCAGGCTTTACATGGTGTCTTGTTCGTAGAACAAACGATGATTCGGAAGCAGCTAGTAGGGGAGTCACCCAGAGGGTGGAGTGCAACTCCAAGCTGGCTGTTGCACTGACCGTGATGGACGAATGCTTTTTACCTGTTGTTGATAGGAGAAGTGGGGTCAATTTAATCCATAATAGTTTATATAATAGCGGGTCAAACTTCAGTCGGTTGAATTATACTGGCTTTTATACCGCTATTTTGGAGCGGGGTGATGAAATAATTTCTGCAGCATCTATCAGGTTCCATGGGACTAAGTTAGCAGAGATGCCATTCATTGGAACTCGCCACATATATAGGAATCAGGGAATGTGCCGCCGGCTTTTTTCTGCCATTGAACTTGCTCTTTGCTCATTGAAGGTTGAGAAGCTGGTTATTCCTGCAATTTCTGAACTTGTTCATACATGGACAACAGTTTTTGGCTTCACACATCTTGAGGAACCACTTAGGCAAGAAATGAGGTCATTGAATATGTTGGTGTTCCCTGGCATTGATATGTTACAGAAGCTTCTAGCAGAGCAAGGAAAACTTGAGGGTAATACAACCGGTGAAGATGCTGAGCAATTTGAGAATGGAGACGTGGGTTCTATTAAGCCTGCTGTGGTCAATGGGTTAGATATCAATTCACCCGCTTTGCAAGATCCTCATGGAAGTGAGGATGCTAGCTCCAATCTTGCCAATAAGATTAACAATGAATGTAGTGATGCTTCTCAAGATATAAGCAATCAAGGTTTATCTGGCAGAACTGTGTGCTCCAAATCTCATTCTGAGGAAAGAATATCTGATTTTGTTTCAGAAAACTGTGCTTCTCCTTCTAATTCTAGTCATGGGGTACTCAAAAAGAAAATTAAAATATCAATGTCTTCTCCCATCAATGATCCATCACCCAAATGTCAACTCATTTCACCAAATGATACTTCTACAAATGGTCTTCCATCGGATCACTCAGATAGTCATGAAATCCGAGCTTTGGGTCAAGCAACTGCATGTTCTGACCTAGCTACTGTAAAGAACATGGTTGAACCTGCTTCTGAGGGGAAACCCCATGCTTTCACTGATATGAATTGTGATTCACCAGGTCTTGACCAAAATCCTGTGTCGGATTCTCAAGTAGTGGATAATGCTTTGTCTTTTAAAGAGTTTGATATGAATGATGCCCATGTTGAGGTTCTCGAAGCTGGTCCTTTAGTGAATTCATCTCAGGCGAACAATACCGAAGAGAATAATGAAAATGTAGATGTCTCTGGTTCTGTTCTGAATCATGCTATCACAGATATGAATTGTGATTCACCAGGGCTAGACCAAAATCCCGTGTCGGATTCCCGAGTGGCGGATAATGACATGTCTTTAAAAAAGTTTGATATGAATGATGCCCATGTTGAGGTTGTTGAAGTTGGTCCTTTAGTGAATTCGTTCGAGGGGAACAATGCCAAAGAGAATGATGAAAATGTAGATGTATCTGGTTCTGTTCTTAATCATGCTATCACTGATGTGAATTGTGATTCACCAGGGCTTGACCAAAATCCTGTGTCAGACTCTCAAGTGGTGGATAATGATTTGTCTTTAAAAAAGTTTGATATGAATGATTCCCTTGGCGAGGTTCTTGAAGCTGGTCCTTTAGTGAATTCATCTCAGGCGAACAATACCAAAGAGAATAATGAAAATGTAGATGTCTCTGGTTCAGCTCTTAATCAAGATATCACTGATATGAATTGTGATTCCCCAGGACTTGACCAAAATCCTGTGTCGGATTCTCAAGTGGGGGATAATGCTTTGTCTTGTAAAGAATTTGATATGAATGATACCCATGTCGAGGTTCTTGAATCTGGTCCTTTAGCGAATTTGTCCGAGGCGAACAATGCCAAAGAGAATGATGAAAATGTAGATGTCTCTGGTTCAGTTCTCGATCACACTGAAAGTGATATGAATAATAATTCACCAGGGCATGACCGAAATCCTGTTACGGATTCTCAAGTGACGGATAATGCTTTGCCTTTTAAAGAGTTTGGTATGAATGATGTCTGTGATGAGGTTGTAGAAGCCGGCCCTTCAGTGAGTTCATCTGAGGGGAACAATACCAAAGAGAATAATAAAAATGTAGATGTCTCTGGTTCAGCTCTTAATCATGCTTCCATTGATATGAACAGTAACTCACCAGGTCTTGACCAAAATCCTGCGGTGGATTCTCAAGTGGCGGAAAGTGCGTCTTGTAAAGAGTTTGATATGAATGATACCCATGTCGAGGTTCTTGAAGCTGGTCCTTTAGTGAATTTGCCTGAGGGGAACAATGCCAAAGAGAATGTTGAAAATGTAGATGTCTCTAGTTCTGTTCTTAATCATGCTGGTGAGAGTTCCTTGCAGGTAAGATCTGATTTAAATGGTGAACTTGCATATGAAGGGAAAAAGAATTCACATTTGGACACACAAGTTGCTTCAAATGAAATGCATTTTGATGAAACTGGCGTAAATCCTTCCGGTGATAGTGCTGAGACTGACCAAGCATTGAATGGTTGA

Protein sequence

>MsaT005195.1

MEPGTRIGSPSGVVVKNRSSSGCLIVRKKGDALGGGVGGGGSSSRKQYDSKKVRKKVKVEVDSSDSESSGELVMPSGRRLGPETIRVCNSLSALERGGGNVGGGEISRKRERMEQIRRNGDGMVEGNGLERREKKVKLDVFDFDEYDGVGKERMRRQFDNDRVGLGGGRFMGTMHAARGSVDREIESGSSRHTVDKRKKAYYDRAIGLHPGDGGEHSRMKMNRDGTQPPLPLLKEKFKPDESIRVQGKNGVLKVMVNKKKVGGSVERYEQRKPVESKQSLRAEGTSKRSVPIHPSSHLETKSAEKQGLLVRPEKKQITTRKSLSSKEDSKGKEQDSEDNDTSMNLEVKNIKAHTPSKKITSENEQTPVHDKFPTTKSSEGKIRRAYWSIIKAYDALQKQLIEDERAAKGESSSFAPIADDVLSQLTRKTRKKMEKDLKMKKKKQRIDDIDSGKERQIKRTSGKKHHMNSIDSDSNEDKLSSFIKQQGSKSMKAKLTENAVTGGSSKSQNATTEKPFSENDPQNLHGRKSRKHGRCTLLVRNKGLNSESDDFVPYTGKRTVLSWLVDSGVVQVSQKVQYRRRKKVMLEGWITREGIHCGCCSKILTVSKFELHAGSKLPQPYQNIYLDSGVSLLQCQIDAWEKQENSGKISFHSVDVDGNDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIQMLPPGEWRCPNCTCKFCGLARATTDKEDDATVNALRTCDLCEKKYHDRCTKDMGALLANSNVSEHSFCGKSCKELFENLKKYLGTKHELDAGFTWCLVRRTNDDSEAASRGVTQRVECNSKLAVALTVMDECFLPVVDRRSGVNLIHNSLYNSGSNFSRLNYTGFYTAILERGDEIISAASIRFHGTKLAEMPFIGTRHIYRNQGMCRRLFSAIELALCSLKVEKLVIPAISELVHTWTTVFGFTHLEEPLRQEMRSLNMLVFPGIDMLQKLLAEQGKLEGNTTGEDAEQFENGDVGSIKPAVVNGLDINSPALQDPHGSEDASSNLANKINNECSDASQDISNQGLSGRTVCSKSHSEERISDFVSENCASPSNSSHGVLKKKIKISMSSPINDPSPKCQLISPNDTSTNGLPSDHSDSHEIRALGQATACSDLATVKNMVEPASEGKPHAFTDMNCDSPGLDQNPVSDSQVVDNALSFKEFDMNDAHVEVLEAGPLVNSSQANNTEENNENVDVSGSVLNHAITDMNCDSPGLDQNPVSDSRVADNDMSLKKFDMNDAHVEVVEVGPLVNSFEGNNAKENDENVDVSGSVLNHAITDVNCDSPGLDQNPVSDSQVVDNDLSLKKFDMNDSLGEVLEAGPLVNSSQANNTKENNENVDVSGSALNQDITDMNCDSPGLDQNPVSDSQVGDNALSCKEFDMNDTHVEVLESGPLANLSEANNAKENDENVDVSGSVLDHTESDMNNNSPGHDRNPVTDSQVTDNALPFKEFGMNDVCDEVVEAGPSVSSSEGNNTKENNKNVDVSGSALNHASIDMNSNSPGLDQNPAVDSQVAESASCKEFDMNDTHVEVLEAGPLVNLPEGNNAKENVENVDVSSSVLNHAGESSLQVRSDLNGELAYEGKKNSHLDTQVASNEMHFDETGVNPSGDSAETDQALNG*