AlfalfaGEDB | MsaG005255

M. sativa ssp. caerulea / MsaG005255

KEGG: K11647
GO: GO:0000003 GO:0000182 GO:0000228 GO:0000785 GO:0000790 GO:0000902 GO:0001085 GO:0001101 GO:0001102 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005975 GO:0005984 GO:0005985 GO:0005987 GO:0006066 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006302 GO:0006310 GO:0006325 GO:0006338 GO:0006355 GO:0006357 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006974 GO:0006996 GO:0007154 GO:0007275 GO:0008094 GO:0008134 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009059 GO:0009266 GO:0009267 GO:0009311 GO:0009313 GO:0009408 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009651 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009991 GO:0010015 GO:0010035 GO:0010073 GO:0010074 GO:0010078 GO:0010154 GO:0010162 GO:0010231 GO:0010431 GO:0010453 GO:0010455 GO:0010468 GO:0010492 GO:0010556 GO:0010557 GO:0010570 GO:0010604 GO:0010628 GO:0010810 GO:0010811 GO:0016043 GO:0016049 GO:0016052 GO:0016462 GO:0016514 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0019827 GO:0021700 GO:0022414 GO:0022611 GO:0022622 GO:0030155 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031490 GO:0031491 GO:0031492 GO:0031494 GO:0031496 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0032991 GO:0033554 GO:0033613 GO:0034198 GO:0034641 GO:0034645 GO:0034728 GO:0036003 GO:0040007 GO:0040008 GO:0042148 GO:0042221 GO:0042393 GO:0042594 GO:0042623 GO:0042766 GO:0043044 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043618 GO:0043620 GO:0043900 GO:0043902 GO:0043933 GO:0044107 GO:0044109 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044262 GO:0044275 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044877 GO:0045595 GO:0045597 GO:0045785 GO:0045893 GO:0045927 GO:0045935 GO:0045944 GO:0046164 GO:0046352 GO:0046483 GO:0048316 GO:0048364 GO:0048507 GO:0048518 GO:0048522 GO:0048589 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051716 GO:0060255 GO:0060560 GO:0061412 GO:0061458 GO:0065007 GO:0070013 GO:0070577 GO:0070603 GO:0070784 GO:0070786 GO:0071496 GO:0071695 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090033 GO:0090304 GO:0097159 GO:0097437 GO:0098727 GO:0099402 GO:0140030 GO:0140033 GO:1900187 GO:1900189 GO:1900190 GO:1900192 GO:1900428 GO:1900430 GO:1901360 GO:1901363 GO:1901575 GO:1901576 GO:1901615 GO:1901616 GO:1901700 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1904949 GO:1905392 GO:1990837 GO:1990928 GO:2000112 GO:2000217 GO:2000219 GO:2000241 GO:2000243 GO:2001141
PFAM: PF00176.26

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG005255	XP_003592449.1	97.227	1082	17	1	5	1073	2	1083	0.0	2169

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG005255	sp\|F4J9M5\|CHR12_ARATH	69.160	1083	284	10	5	1052	15	1082	0.0	1492

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG005255	tr\|G7IE30\|G7IE30_MEDTR	97.227	1082	17	1	5	1073	2	1083	0.0	2169

TFs/TRs:

Gene ID	Type	Classification
MsaG005255	TR	SNF2

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG005255	MtrunA17_Chr1g0205891	97.227	1082	17	1	5	1073	2	1083	0.0	2169
MsaG005255	MtrunA17_Chr5g0394201	78.192	1073	203	9	13	1069	3	1060	0.0	1668
MsaG005255	MtrunA17_Chr4g0066651	44.884	733	360	14	177	889	813	1521	0.0	609
MsaG005255	MtrunA17_Chr4g0066741	47.438	527	256	9	353	873	176	687	5.85e-162	506
MsaG005255	MtrunA17_Chr7g0248031	42.446	695	321	14	342	975	970	1646	1.97e-154	507
MsaG005255	MtrunA17_Chr2g0286291	46.869	527	259	9	353	873	179	690	5.28e-152	480
MsaG005255	MtrunA17_Chr8g0348721	38.798	799	378	18	212	928	821	1590	1.41e-149	493
MsaG005255	MtrunA17_Chr5g0403921	44.196	491	256	10	360	835	178	665	6.27e-130	412
MsaG005255	MtrunA17_Chr3g0095091	46.436	491	235	7	353	826	558	1037	5.40e-128	428
MsaG005255	MtrunA17_Chr5g0442141	44.524	557	260	12	353	888	604	1132	5.52e-128	428
MsaG005255	MtrunA17_Chr3g0137091	40.702	570	283	11	332	872	263	806	1.12e-114	387
MsaG005255	MtrunA17_Chr7g0232121	40.404	495	254	10	364	824	37	524	1.02e-106	354
MsaG005255	MtrunA17_Chr4g0052341	41.603	524	259	15	356	857	735	1233	2.40e-103	358
MsaG005255	MtrunA17_Chr1g0163011	37.085	542	245	14	366	827	195	720	7.14e-86	293
MsaG005255	MtrunA17_Chr1g0175191	44.805	308	162	4	355	660	511	812	1.00e-73	268
MsaG005255	MtrunA17_Chr1g0175191	54.430	158	71	1	675	832	1061	1217	7.48e-49	190
MsaG005255	MtrunA17_Chr1g0183681	32.333	600	322	20	292	826	304	884	6.86e-73	264
MsaG005255	MtrunA17_Chr4g0017211	33.013	521	285	14	366	827	1450	1965	1.69e-72	265
MsaG005255	MtrunA17_Chr7g0257101	40.514	311	169	5	361	658	573	880	4.28e-69	253
MsaG005255	MtrunA17_Chr7g0257101	51.572	159	76	1	670	828	1186	1343	7.98e-41	164
MsaG005255	MtrunA17_Chr5g0393461	33.464	511	284	14	366	826	184	688	8.64e-69	249
MsaG005255	MtrunA17_Chr8g0384531	31.379	631	315	23	279	834	301	888	1.84e-67	247
MsaG005255	MtrunA17_Chr7g0231521	48.969	194	87	2	643	824	252	445	2.22e-47	182
MsaG005255	MtrunA17_Chr7g0231521	37.313	201	116	1	366	556	39	239	3.71e-41	163
MsaG005255	MtrunA17_Chr4g0069451	26.369	493	309	16	345	818	154	611	1.43e-30	129
MsaG005255	MtrunA17_Chr4g0040301	46.154	156	75	2	658	813	370	516	1.95e-30	129
MsaG005255	MtrunA17_Chr4g0040301	31.020	245	149	8	394	623	18	257	5.45e-23	105
MsaG005255	MtrunA17_Chr2g0296421	25.720	486	314	17	362	808	507	984	2.13e-27	120
MsaG005255	MtrunA17_Chr7g0232971	28.075	374	209	15	491	827	904	1254	1.17e-25	115
MsaG005255	MtrunA17_Chr1g0168031	28.659	328	169	12	387	666	535	845	1.64e-25	114
MsaG005255	MtrunA17_Chr1g0168031	37.324	142	86	2	679	818	990	1130	5.04e-18	90.1
MsaG005255	MtrunA17_Chr8g0352361	24.746	493	311	18	362	808	357	835	2.56e-24	110
MsaG005255	MtrunA17_Chr1g0190381	37.705	183	101	3	675	844	187	369	1.27e-23	106
MsaG005255	MtrunA17_Chr7g0233021	26.316	342	213	10	491	807	841	1168	2.31e-22	104
MsaG005255	MtrunA17_Chr7g0264371	26.620	432	260	15	414	821	327	725	8.70e-22	102
MsaG005255	MtrunA17_Chr7g0224051	23.791	517	277	13	383	808	565	1055	2.33e-21	100
MsaG005255	MtrunA17_Chr2g0320751	25.714	350	170	10	387	663	399	731	2.73e-21	100
MsaG005255	MtrunA17_Chr2g0320751	35.294	136	85	2	685	818	859	993	2.34e-19	94.4
MsaG005255	MtrunA17_Chr7g0232991	27.027	333	223	7	491	809	272	598	3.95e-21	99.4
MsaG005255	MtrunA17_Chr7g0225791	24.000	500	273	16	388	808	752	1223	7.64e-21	99.4
MsaG005255	MtrunA17_Chr7g0255821	37.662	154	92	3	667	817	640	792	4.02e-20	96.7
MsaG005255	MtrunA17_Chr7g0255821	24.866	374	213	11	302	623	136	493	8.56e-15	79.3
MsaG005255	MtrunA17_Chr5g0437621	24.815	540	315	17	388	844	754	1285	1.32e-19	95.5
MsaG005255	MtrunA17_Chr1g0149871	39.655	116	60	2	331	446	217	322	6.76e-19	89.4
MsaG005255	MtrunA17_Chr7g0233031	25.287	348	202	9	491	807	861	1181	2.14e-18	91.3
MsaG005255	MtrunA17_Chr7g0233001	25.862	348	211	10	491	808	128	458	4.13e-18	89.4
MsaG005255	MtrunA17_Chr4g0039561	45.263	95	49	1	640	731	47	141	8.39e-18	82.8
MsaG005255	MtrunA17_Chr4g0024921	36.154	130	80	2	689	817	779	906	1.33e-17	88.6
MsaG005255	MtrunA17_Chr1g0212331	35.484	155	96	2	694	845	887	1040	2.32e-17	87.8
MsaG005255	MtrunA17_Chr1g0212331	26.562	192	119	5	483	663	522	702	1.47e-13	75.5
MsaG005255	MtrunA17_Chr3g0114161	23.593	551	321	17	382	844	691	1229	2.72e-17	87.8
MsaG005255	MtrunA17_Chr2g0281601	38.095	126	77	1	692	817	1148	1272	6.63e-17	86.7
MsaG005255	MtrunA17_Chr2g0281601	26.728	217	133	6	452	657	752	953	2.80e-11	68.2
MsaG005255	MtrunA17_Chr1g0190391	29.614	233	127	9	351	552	569	795	5.02e-16	83.2
MsaG005255	MtrunA17_Chr2g0320781	33.333	120	75	2	694	808	111	230	5.42e-12	67.0
MsaG005255	MtrunA17_Chr3g0086111	23.368	291	190	10	366	641	187	459	8.17e-11	66.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG005255	AT3G06010.1	69.160	1083	284	10	5	1052	15	1082	0.0	1492
MsaG005255	AT5G19310.1	64.835	1092	318	13	2	1067	7	1058	0.0	1362
MsaG005255	AT5G19310.2	68.029	832	223	9	240	1067	2	794	0.0	1099
MsaG005255	AT2G28290.2	40.398	854	409	17	82	889	487	1286	5.29e-174	567
MsaG005255	AT2G28290.6	40.398	854	409	17	82	889	488	1287	5.77e-174	567
MsaG005255	AT2G28290.3	40.398	854	409	17	82	889	487	1286	6.00e-174	567
MsaG005255	AT2G28290.4	40.398	854	409	17	82	889	487	1286	6.00e-174	567
MsaG005255	AT2G28290.1	40.398	854	409	17	82	889	487	1286	6.07e-174	567
MsaG005255	AT2G28290.5	40.398	854	409	17	82	889	488	1287	6.74e-174	566
MsaG005255	AT2G46020.2	39.717	778	365	16	212	907	815	1570	5.37e-152	500
MsaG005255	AT2G46020.3	39.717	778	365	16	212	907	815	1570	5.37e-152	500
MsaG005255	AT2G46020.4	39.717	778	365	16	212	907	815	1570	5.37e-152	500
MsaG005255	AT2G46020.5	39.846	778	363	17	212	907	815	1569	1.38e-151	499
MsaG005255	AT2G46020.1	39.846	778	363	17	212	907	815	1569	1.38e-151	499
MsaG005255	AT2G46020.6	39.846	778	363	17	212	907	815	1569	1.38e-151	499
MsaG005255	AT5G18620.1	46.869	527	259	9	353	873	182	693	1.60e-151	479
MsaG005255	AT5G18620.2	46.869	527	259	9	353	873	182	693	1.79e-151	479
MsaG005255	AT3G06400.2	46.881	529	256	10	353	873	177	688	3.98e-151	478
MsaG005255	AT3G06400.3	46.881	529	256	10	353	873	177	688	4.03e-151	478
MsaG005255	AT3G06400.1	46.881	529	256	10	353	873	177	688	4.40e-151	478
MsaG005255	AT2G13370.1	47.239	489	232	7	353	826	612	1089	5.87e-128	428
MsaG005255	AT2G13370.2	47.239	489	232	7	353	826	612	1089	5.87e-128	428
MsaG005255	AT2G13370.3	47.239	489	232	7	353	826	612	1089	5.87e-128	428
MsaG005255	AT5G66750.1	42.617	535	281	11	360	872	196	726	2.07e-127	407
MsaG005255	AT2G25170.1	41.255	526	261	10	358	856	266	770	1.12e-111	378
MsaG005255	AT2G25170.4	41.255	526	261	10	358	856	266	770	1.12e-111	378
MsaG005255	AT2G25170.2	41.255	526	261	10	358	856	283	787	1.39e-111	378
MsaG005255	AT2G25170.3	41.255	526	261	10	358	856	292	796	1.63e-111	378
MsaG005255	AT2G44980.1	41.015	473	260	9	366	825	51	517	1.66e-107	356
MsaG005255	AT2G44980.3	39.425	487	266	7	366	825	51	535	6.02e-107	355
MsaG005255	AT4G31900.3	42.531	482	237	13	358	825	218	673	1.89e-104	355
MsaG005255	AT4G31900.1	42.531	482	237	13	358	825	218	673	1.94e-104	355
MsaG005255	AT2G44980.2	39.139	488	267	8	366	825	51	536	2.19e-104	348
MsaG005255	AT4G31900.2	42.531	482	237	13	358	825	177	632	2.36e-104	354
MsaG005255	AT5G44800.1	40.530	528	271	12	354	861	677	1181	2.16e-101	353
MsaG005255	AT2G02090.1	37.132	544	246	14	366	829	213	740	1.96e-85	293
MsaG005255	AT3G12810.2	42.815	341	185	4	326	660	487	823	3.17e-75	273
MsaG005255	AT3G12810.2	53.165	158	73	1	675	832	1070	1226	1.72e-46	183
MsaG005255	AT3G12810.1	42.815	341	185	4	326	660	491	827	3.35e-75	273
MsaG005255	AT3G12810.1	53.165	158	73	1	675	832	1074	1230	1.78e-46	183
MsaG005255	AT3G54280.1	34.226	523	279	16	365	827	1450	1967	1.60e-72	265
MsaG005255	AT3G54280.2	34.226	523	279	16	365	827	1481	1998	2.75e-72	264
MsaG005255	AT2G18760.4	32.353	510	280	12	365	826	384	876	1.86e-71	260
MsaG005255	AT2G18760.1	32.353	510	280	12	365	826	384	876	1.86e-71	260
MsaG005255	AT2G18760.2	32.353	510	280	12	365	826	384	876	1.86e-71	260
MsaG005255	AT2G18760.7	32.353	510	280	12	365	826	384	876	1.86e-71	260
MsaG005255	AT2G18760.5	32.353	510	280	12	365	826	384	876	1.86e-71	260
MsaG005255	AT2G18760.6	32.353	510	280	12	365	826	384	876	1.86e-71	260
MsaG005255	AT2G18760.3	32.353	510	280	12	365	826	443	935	3.71e-71	259
MsaG005255	AT3G57300.3	33.068	502	287	15	199	658	394	888	3.75e-69	253
MsaG005255	AT3G57300.1	32.869	502	288	15	199	658	394	888	4.98e-69	254
MsaG005255	AT3G57300.1	53.247	154	71	1	675	828	1205	1357	1.33e-40	164
MsaG005255	AT3G57300.4	32.869	502	288	15	199	658	394	888	4.98e-69	254
MsaG005255	AT3G57300.4	53.247	154	71	1	675	828	1205	1357	1.33e-40	164
MsaG005255	AT3G19210.3	33.399	509	287	14	366	826	180	684	1.30e-68	246
MsaG005255	AT3G19210.2	33.202	506	290	12	366	826	180	682	1.81e-68	248
MsaG005255	AT3G19210.1	33.399	509	287	14	366	826	180	684	3.66e-68	247
MsaG005255	AT5G63950.1	31.356	590	293	19	341	845	338	900	4.37e-66	243
MsaG005255	AT3G57300.2	30.654	535	289	15	199	658	394	921	2.94e-64	239
MsaG005255	AT3G57300.2	53.247	154	71	1	675	828	1238	1390	1.36e-40	164
MsaG005255	AT5G63950.2	31.724	580	287	20	341	845	338	883	1.39e-62	232
MsaG005255	AT1G03750.1	32.270	282	165	7	366	629	139	412	1.55e-35	146
MsaG005255	AT1G03750.1	47.887	142	73	1	672	813	524	664	5.95e-31	132
MsaG005255	AT1G48310.1	25.793	473	298	14	365	818	171	609	3.85e-29	125
MsaG005255	AT1G48310.2	25.793	473	298	14	365	818	176	614	5.05e-29	125
MsaG005255	AT1G48310.3	25.793	473	298	14	365	818	171	609	8.74e-29	124
MsaG005255	AT5G43530.1	28.173	323	174	10	387	663	683	993	1.17e-25	115
MsaG005255	AT5G43530.1	34.831	178	108	4	673	848	1106	1277	3.99e-20	97.4
MsaG005255	AT1G08600.1	40.244	164	85	3	675	825	1093	1256	5.80e-23	106
MsaG005255	AT1G08600.1	25.074	339	207	11	345	655	699	1018	2.27e-20	98.2
MsaG005255	AT2G21450.2	25.437	515	309	17	365	817	271	772	6.31e-23	106
MsaG005255	AT1G05490.1	26.149	348	206	8	491	807	1008	1335	6.37e-23	106
MsaG005255	AT5G22750.1	26.857	350	171	12	386	665	414	748	6.59e-23	106
MsaG005255	AT5G22750.1	37.671	146	88	2	675	818	862	1006	1.93e-22	104
MsaG005255	AT1G08600.4	40.244	164	85	3	675	825	1114	1277	6.74e-23	106
MsaG005255	AT1G08600.4	24.642	349	217	12	345	655	699	1039	2.04e-19	95.1
MsaG005255	AT1G08600.3	40.244	164	85	3	675	825	1114	1277	6.74e-23	106
MsaG005255	AT1G08600.3	24.642	349	217	12	345	655	699	1039	2.04e-19	95.1
MsaG005255	AT1G08600.2	40.244	164	85	3	675	825	1114	1277	6.74e-23	106
MsaG005255	AT1G08600.2	24.642	349	217	12	345	655	699	1039	2.04e-19	95.1
MsaG005255	AT2G21450.1	25.437	515	309	17	365	817	264	765	7.42e-23	105
MsaG005255	AT2G21450.3	24.665	523	303	17	365	817	173	674	1.57e-22	104
MsaG005255	AT3G16600.1	26.575	365	188	13	343	660	28	359	6.69e-20	95.9
MsaG005255	AT5G05130.1	38.211	123	75	1	696	817	729	851	1.26e-19	95.5
MsaG005255	AT5G05130.1	23.121	346	229	10	419	744	361	689	9.46e-13	73.2
MsaG005255	AT5G20420.1	23.077	507	296	14	382	808	707	1199	1.93e-18	92.0
MsaG005255	AT1G11100.5	37.778	135	79	3	691	822	927	1059	7.14e-18	90.1
MsaG005255	AT1G11100.5	25.414	362	188	14	360	655	394	739	3.15e-16	84.7
MsaG005255	AT1G11100.3	37.778	135	79	3	691	822	971	1103	7.24e-18	90.1
MsaG005255	AT1G11100.2	38.168	131	76	3	691	818	1113	1241	9.22e-18	89.7
MsaG005255	AT1G11100.4	38.168	131	76	3	691	818	1114	1242	9.23e-18	89.7
MsaG005255	AT1G11100.1	37.778	135	79	3	691	822	1070	1202	9.72e-18	89.7
MsaG005255	AT1G11100.1	24.093	386	210	14	338	655	512	882	2.56e-16	85.1
MsaG005255	AT1G02670.4	25.538	372	189	14	348	657	106	451	2.37e-17	87.4
MsaG005255	AT1G05120.2	37.692	130	78	2	689	817	720	847	2.85e-17	87.8
MsaG005255	AT1G05120.1	37.692	130	78	2	689	817	677	804	2.93e-17	87.8
MsaG005255	AT1G02670.5	25.538	372	189	14	348	657	79	424	3.08e-17	87.4
MsaG005255	AT1G02670.5	36.792	106	64	2	694	798	512	615	2.03e-13	75.1
MsaG005255	AT1G02670.6	25.538	372	189	14	348	657	79	424	3.12e-17	87.4
MsaG005255	AT1G02670.6	37.600	125	75	2	694	817	512	634	8.75e-16	82.8
MsaG005255	AT1G02670.3	25.538	372	189	14	348	657	106	451	3.42e-17	87.4
MsaG005255	AT1G02670.3	37.600	125	75	2	694	817	539	661	8.31e-16	82.8
MsaG005255	AT1G02670.2	25.538	372	189	14	348	657	106	451	4.09e-17	87.0
MsaG005255	AT1G02670.2	36.792	106	64	2	694	798	539	642	2.16e-13	75.1
MsaG005255	AT1G02670.1	27.714	350	186	14	348	657	117	439	6.07e-17	86.7
MsaG005255	AT1G02670.1	37.600	125	75	2	694	817	527	649	1.24e-15	82.4
MsaG005255	AT1G02670.7	27.714	350	186	14	348	657	106	428	6.32e-17	86.3
MsaG005255	AT1G02670.7	37.600	125	75	2	694	817	516	638	1.23e-15	82.4
MsaG005255	AT1G61140.3	36.154	130	82	1	688	817	961	1089	1.26e-16	85.9
MsaG005255	AT1G61140.3	26.702	191	119	5	483	662	624	804	1.53e-11	69.3
MsaG005255	AT1G61140.1	36.154	130	82	1	688	817	1119	1247	1.30e-16	85.9
MsaG005255	AT1G61140.1	26.702	191	119	5	483	662	782	962	1.01e-11	70.1
MsaG005255	AT3G42670.2	23.684	494	295	15	388	808	709	1193	2.89e-16	84.7
MsaG005255	AT3G42670.3	23.684	494	295	15	388	808	709	1193	2.89e-16	84.7
MsaG005255	AT3G42670.1	23.684	494	295	15	388	808	709	1193	2.89e-16	84.7
MsaG005255	AT3G42670.4	23.684	494	295	15	388	808	711	1195	3.12e-16	84.7
MsaG005255	AT3G24340.1	25.150	334	207	11	491	801	744	1057	3.16e-16	84.7
MsaG005255	AT1G50410.2	38.281	128	74	3	694	818	828	953	1.63e-15	82.4
MsaG005255	AT1G50410.2	25.909	220	138	6	479	684	462	670	3.99e-12	71.2
MsaG005255	AT1G50410.1	38.281	128	74	3	694	818	828	953	1.63e-15	82.4
MsaG005255	AT1G50410.1	25.909	220	138	6	479	684	462	670	3.99e-12	71.2
MsaG005255	AT1G50410.3	38.281	128	74	3	694	818	828	953	1.63e-15	82.4
MsaG005255	AT1G50410.3	25.909	220	138	6	479	684	462	670	3.99e-12	71.2
MsaG005255	AT3G20010.2	36.800	125	76	2	694	817	603	725	3.62e-15	80.9
MsaG005255	AT3G20010.3	36.800	125	76	2	694	817	628	750	3.85e-15	80.9
MsaG005255	AT3G20010.1	36.800	125	76	2	694	817	894	1016	4.01e-15	81.3
MsaG005255	AT3G20010.5	36.800	125	76	2	694	817	894	1016	4.01e-15	81.3
MsaG005255	AT3G20010.7	36.800	125	76	2	694	817	894	1016	4.01e-15	81.3
MsaG005255	AT1G08060.1	29.167	192	118	4	640	816	515	703	2.27e-13	75.5
MsaG005255	AT1G08060.2	29.167	192	118	4	640	816	515	703	2.27e-13	75.5

Find 246 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAGTGCCTGCTTGAACTTTA+TGG	0.109414	1:-79468088	MsaT005255.1:CDS
TAACAACTTAAATGGGATTT+TGG	0.130016	1:-79464275	MsaT005255.1:CDS
TTGTTTAATAACAACTTAAA+TGG	0.140802	1:-79464283	MsaT005255.1:CDS
CATCCTCGTGTGCATGTTTC+TGG	0.142540	1:+79460822	None:intergenic
CTCGATCAGATGAGGAATTT+TGG	0.226416	1:-79461282	MsaT005255.1:CDS
AATAAACTACTTGTAAATTT+AGG	0.234623	1:-79465370	MsaT005255.1:CDS
TGACCAGCTCTGCGAAGTTT+TGG	0.243171	1:+79462267	None:intergenic
GATTTCAACAGCGGCGTTAC+TGG	0.246227	1:-79461139	MsaT005255.1:CDS
TTCAAGTATCTTAGACTTGA+TGG	0.249288	1:-79462174	MsaT005255.1:CDS
TTCTGGAAATTTGTTCCTTC+AGG	0.253173	1:+79460839	None:intergenic
TCCTGCAAACTGTTCTGAAT+TGG	0.266464	1:+79463400	None:intergenic
TGCCCCAATCAAACAATTTC+CGG	0.270602	1:+79467271	None:intergenic
TCATTCACTCTTAGGTAATT+AGG	0.286088	1:-79463170	MsaT005255.1:intron
TTCAAAGAATGGAATTTATA+AGG	0.287755	1:-79465257	MsaT005255.1:CDS
GGATCTCCAACTCCATAAAA+TGG	0.291884	1:+79467231	None:intergenic
AAGAAGCTTGACTTTGTAAC+TGG	0.295255	1:+79466540	None:intergenic
CTTAAGAGAAACATAAAGTA+TGG	0.301035	1:+79462093	None:intergenic
AGCACCCGGGCAGGCGGTCT+TGG	0.301898	1:-79462072	MsaT005255.1:CDS
CGTTTCTCAAGAAAATTAAA+TGG	0.308348	1:-79463840	MsaT005255.1:CDS
CAAAGGCAGTTCTGCCAAAC+TGG	0.313095	1:-79464153	MsaT005255.1:CDS
TTCTGCCATACATTCAATTC+AGG	0.313549	1:-79465143	MsaT005255.1:CDS
AACGCCGCTGTTGAAATCTT+TGG	0.316353	1:+79461144	None:intergenic
CCAACATTTCTCTTCTGTCC+TGG	0.321803	1:+79461380	None:intergenic
CCTGCAAACTGTTCTGAATT+GGG	0.322712	1:+79463401	None:intergenic
TTGAAACCTGATGCACATTT+CGG	0.340348	1:+79468347	None:intergenic
TTATAATCTTCGACAGTGAT+TGG	0.347518	1:-79462023	MsaT005255.1:CDS
TAGGGCGATGTAGGGAGTTC+TGG	0.347834	1:-79468416	MsaT005255.1:CDS
TAACCATCCTTACCTCTTTG+TGG	0.357400	1:-79462367	MsaT005255.1:CDS
GCAATAAAGGAGGAATATTC+AGG	0.357744	1:-79463919	MsaT005255.1:CDS
CGGCTTGTTGATCCATTTGT+GGG	0.360056	1:+79461998	None:intergenic
CTGACCGGAAATTGTTTGAT+TGG	0.366516	1:-79467275	MsaT005255.1:CDS
TTCTTGATCATCGGCCTTCA+AGG	0.367866	1:+79465456	None:intergenic
CAACATTTCTCTTCTGTCCT+GGG	0.367967	1:+79461381	None:intergenic
TGACCGGAAATTGTTTGATT+GGG	0.370582	1:-79467274	MsaT005255.1:CDS
CCCAATTCAGAACAGTTTGC+AGG	0.371140	1:-79463401	MsaT005255.1:CDS
GGATGAGAGAAAAGCAATAA+AGG	0.375229	1:-79463932	MsaT005255.1:CDS
GGTGTATGCTCCAATTAAAA+AGG	0.377530	1:-79461176	MsaT005255.1:CDS
GAGGAGATTGTCAGAGCATC+AGG	0.378586	1:-79462318	MsaT005255.1:CDS
ACACTCTCGAAGTTTATTTA+CGG	0.382400	1:-79462206	MsaT005255.1:CDS
TGACGTAGGCAGAGTTGGTT+TGG	0.391039	1:-79463031	MsaT005255.1:CDS
AACATAAAGTATGGGGAGTC+AGG	0.394619	1:+79462102	None:intergenic
CAGTTTGGCAGAACTGCCTT+TGG	0.395299	1:+79464154	None:intergenic
TTGGCTGATGAAATGGGGCT+TGG	0.400761	1:-79464256	MsaT005255.1:CDS
TATTGACGCGAAAGTCATTC+AGG	0.400900	1:-79461866	MsaT005255.1:CDS
ATTAAGATCATATCAGATAG+AGG	0.404038	1:-79464326	MsaT005255.1:CDS
ATCTGCCCCTGTATTATCAC+TGG	0.410615	1:+79460961	None:intergenic
GAGAATTCAATGATCCAGTT+TGG	0.412594	1:+79464139	None:intergenic
TGGCTGATGAAATGGGGCTT+GGG	0.413047	1:-79464255	MsaT005255.1:CDS
TGAATATTCCAGGAGAAAAC+AGG	0.413971	1:+79460776	None:intergenic
GAGATCAAGCCATCTTGGTC+AGG	0.415137	1:-79460744	MsaT005255.1:CDS
CGTCGAGGTTCAAGCTCACT+TGG	0.415918	1:-79461346	MsaT005255.1:CDS
TTCAGATGGCATTGAACCCT+TGG	0.416951	1:-79465314	MsaT005255.1:CDS
ATTGGAGCATACACCCAATC+TGG	0.419562	1:+79461184	None:intergenic
TCAAACCAAGACCGCCTGCC+CGG	0.419925	1:+79462067	None:intergenic
CTCCCAAAACTTCGCAGAGC+TGG	0.420781	1:-79462270	MsaT005255.1:CDS
GATCATCGGCCTTCAAGGCT+TGG	0.421253	1:+79465461	None:intergenic
CAACTCCGTTCAAAATTTCG+AGG	0.421472	1:-79463338	MsaT005255.1:CDS
TCGGCTTGTTGATCCATTTG+TGG	0.421732	1:+79461997	None:intergenic
GACTCTAACGATTTACTTGA+AGG	0.422125	1:-79465181	MsaT005255.1:CDS
CACGAGGATGTCAGTGGAAG+TGG	0.422769	1:-79460809	MsaT005255.1:CDS
CTACAGAAAATGACAGAACT+TGG	0.427775	1:-79460904	MsaT005255.1:CDS
ATTAAAACTATTCTTTATGA+TGG	0.430849	1:-79463961	MsaT005255.1:CDS
TGTTTAATAACAACTTAAAT+GGG	0.432681	1:-79464282	MsaT005255.1:CDS
ATTCAAATGGAAGAGCAAAC+TGG	0.433262	1:-79460694	MsaT005255.1:CDS
GAGTCAGATGCTTCAAAGAA+TGG	0.434983	1:-79465268	MsaT005255.1:CDS
TTCAGGCTTGAATCTCTTTG+AGG	0.438431	1:+79460856	None:intergenic
AACCATCCTTACCTCTTTGT+GGG	0.439855	1:-79462366	MsaT005255.1:CDS
GGCAAAGACAAAGGGCAACC+CGG	0.439976	1:-79465501	MsaT005255.1:CDS
TGTCAAAGCTTTCAGCTAAA+GGG	0.444668	1:-79461033	MsaT005255.1:CDS
AAGAAGAGATCAAGCCATCT+TGG	0.445305	1:-79460749	MsaT005255.1:CDS
AGGTCCTCTCCCCTGCTTGA+AGG	0.445320	1:+79468118	None:intergenic
CCGTTCAAAATTTCGAGGAC+TGG	0.446102	1:-79463333	MsaT005255.1:CDS
CCACTTGATTGTTGCTCCAA+AGG	0.447607	1:-79464170	MsaT005255.1:CDS
CATACATTCAATTCAGGAAA+AGG	0.448936	1:-79465137	MsaT005255.1:intron
TTGTGAATCTAGGGCGATGT+AGG	0.453498	1:-79468425	MsaT005255.1:intron
AGTAGAGGACATAATTCAAA+TGG	0.455993	1:-79460707	MsaT005255.1:CDS
CTCACAAATGACTCGACTCA+TGG	0.460052	1:-79462229	MsaT005255.1:CDS
ATTTCTTCCTGGGAAATCTC+AGG	0.462135	1:-79463109	MsaT005255.1:CDS
AACCAGAATTGCCTTCAAGC+AGG	0.462168	1:-79468129	MsaT005255.1:intron
CTGATGTGAGTTCTGAATAC+TGG	0.462357	1:-79467320	MsaT005255.1:CDS
AATTCTCAACGTGGGCTCCT+AGG	0.463019	1:-79464123	MsaT005255.1:intron
ATGTCAAAGCTTTCAGCTAA+AGG	0.463108	1:-79461034	MsaT005255.1:CDS
AAGAACAACTATTAATCATT+CGG	0.463146	1:-79463264	MsaT005255.1:CDS
GGAATCTCAATTTCTCTGCC+CGG	0.463269	1:+79465482	None:intergenic
ATTGCTGTTGAGACGATAGA+TGG	0.465300	1:+79468945	None:intergenic
TGAACGGAGTTGAAAATGCT+TGG	0.465839	1:+79463349	None:intergenic
CAACGTCCGAAATGTGCATC+AGG	0.468461	1:-79468353	MsaT005255.1:CDS
ATTGAGATTCCAAGCCTTGA+AGG	0.469029	1:-79465470	MsaT005255.1:CDS
GAGAGCAGAAATGAGTGTTT+TGG	0.472873	1:+79469023	None:intergenic
CAATCAAACAATTTCCGGTC+AGG	0.474699	1:+79467276	None:intergenic
GCCGTCATCAAAATCAGATT+CGG	0.478355	1:-79468304	MsaT005255.1:CDS
AGCAGCTGTTCAACGTCAAA+AGG	0.481460	1:-79465347	MsaT005255.1:CDS
GTCGAGTCATTTGTGAGAAA+AGG	0.481891	1:+79462235	None:intergenic
CAAGCAGGCACTTTGTCTGC+AGG	0.482300	1:+79468098	None:intergenic
ACATCAACTCGGTCTGCAAA+GGG	0.483206	1:+79463301	None:intergenic
CAGAGTTGCAGTCGAAGGTT+CGG	0.483285	1:-79467344	MsaT005255.1:CDS
AATGCGATGTGCTCGGTCCT+CGG	0.487503	1:+79461978	None:intergenic
TTTGTCCAATGCGATGTGCT+CGG	0.491807	1:+79461971	None:intergenic
GGACGAAGAGAGAAGACAAA+AGG	0.493611	1:-79461245	MsaT005255.1:CDS
GCACAAGCCAGTGATAATAC+AGG	0.494059	1:-79460968	MsaT005255.1:CDS
CAGAGAAAACAGAGGAATGA+TGG	0.494594	1:-79466512	MsaT005255.1:CDS
CAGTGATTGGAACCCACAAA+TGG	0.495113	1:-79462010	MsaT005255.1:CDS
GAGCAACCGTCTATACTTCA+AGG	0.495756	1:-79464355	MsaT005255.1:CDS
TGCATCAGGTTTCAAGTTGG+AGG	0.497243	1:-79468339	MsaT005255.1:CDS
TTATCAGCATCCATGGCAAA+TGG	0.497860	1:+79467210	None:intergenic
GGATGTCAGTGGAAGTGGAT+TGG	0.498594	1:-79460804	MsaT005255.1:CDS
AAGGAGGAATATTCAGGAGA+GGG	0.498676	1:-79463913	MsaT005255.1:CDS
TTCGAATACAAAGGTGTGAC+TGG	0.500512	1:-79464196	MsaT005255.1:CDS
ATCAGATAGAGGGGCTCCAA+TGG	0.501388	1:-79464315	MsaT005255.1:CDS
AAGAGCATGAATTGCCAGAT+TGG	0.503500	1:-79461198	MsaT005255.1:CDS
CATGTAAGCTTCTTGATCAT+CGG	0.504238	1:+79465447	None:intergenic
AGAGCGTGCGAAACAAAAGA+TGG	0.505221	1:-79461890	MsaT005255.1:CDS
GAATCTCAATTTCTCTGCCC+GGG	0.505281	1:+79465483	None:intergenic
TTAGGCCCTTCATATTAAGA+AGG	0.505635	1:-79463152	MsaT005255.1:CDS
TTGGAAGAAGAAAATTAAGC+AGG	0.506286	1:+79463368	None:intergenic
TGACTCAGGTAAATCAGCTT+CGG	0.507128	1:+79465285	None:intergenic
CTATGATATGTATAAATGTA+AGG	0.507681	1:-79462340	MsaT005255.1:CDS
AAACTATTCTTTATGATGGA+CGG	0.508309	1:-79463957	MsaT005255.1:CDS
CGGTTAATTTCTCTCTCGCT+AGG	0.509289	1:+79461313	None:intergenic
AAACTACAGATCACGTCTCA+TGG	0.510288	1:-79461221	MsaT005255.1:CDS
AATGGAAGAAAAGAAAGAAA+AGG	0.514282	1:-79469058	MsaT005255.1:CDS
CAAACCAAGACCGCCTGCCC+GGG	0.516644	1:+79462068	None:intergenic
TGATATGTCAGCCTGGCAAA+AGG	0.517444	1:-79463073	MsaT005255.1:CDS
TTCTTTGAAGCATCTGACTC+AGG	0.520835	1:+79465271	None:intergenic
TAAACAAAGAAAGCATCCAT+TGG	0.520870	1:+79464299	None:intergenic
TAAATGGATCTACTTAATTG+TGG	0.523221	1:-79463824	MsaT005255.1:CDS
AGAACAGTTTGCAGGAATTG+TGG	0.523248	1:-79463393	MsaT005255.1:CDS
TGAATTATGTCCTCTACTCT+CGG	0.523605	1:+79460712	None:intergenic
GTTAGCAGAGTTGCAGTCGA+AGG	0.523984	1:-79467349	MsaT005255.1:CDS
ACCAGAATTGCCTTCAAGCA+GGG	0.527930	1:-79468128	MsaT005255.1:intron
ACAGAGGAATGATGGCATCC+AGG	0.528591	1:-79466504	MsaT005255.1:intron
ATCAGCTTCGGAATCTTCCA+AGG	0.529165	1:+79465297	None:intergenic
GCAAAGACAAAGGGCAACCC+GGG	0.531802	1:-79465500	MsaT005255.1:CDS
GCTACAATGGATGCAGGCTA+TGG	0.531969	1:-79461071	MsaT005255.1:CDS
CAATTGATTATCAGCATCCA+TGG	0.532221	1:+79467203	None:intergenic
CCAGGACAGAAGAGAAATGT+TGG	0.532850	1:-79461380	MsaT005255.1:CDS
GGCTTGAATCTCTTTGAGGA+AGG	0.533698	1:+79460860	None:intergenic
CTCTTAAGCACCCGGGCAGG+CGG	0.536499	1:-79462078	MsaT005255.1:CDS
GTTACTGACGTAGGCAGAGT+TGG	0.536801	1:-79463036	MsaT005255.1:CDS
GCATGGAAGGCAAAGACAAA+GGG	0.537728	1:-79465509	MsaT005255.1:CDS
TTAAGAGAAACATAAAGTAT+GGG	0.538503	1:+79462094	None:intergenic
TGCAGGCTATGGAGAATGGT+GGG	0.539260	1:-79461060	MsaT005255.1:CDS
TGTGAATCTAGGGCGATGTA+GGG	0.540965	1:-79468424	MsaT005255.1:intron
GACCGGAAATTGTTTGATTG+GGG	0.541415	1:-79467273	MsaT005255.1:CDS
TTATGTTTCTCTTAAGCACC+CGG	0.541604	1:-79462086	MsaT005255.1:CDS
ATCTACTTAATTGTGGATGA+AGG	0.541631	1:-79463817	MsaT005255.1:CDS
CACAAGCCAGTGATAATACA+GGG	0.542698	1:-79460967	MsaT005255.1:CDS
GACATCAACTCGGTCTGCAA+AGG	0.543242	1:+79463300	None:intergenic
TTTCTCTTAAGCACCCGGGC+AGG	0.544462	1:-79462081	MsaT005255.1:CDS
ACGGAGTCGAGGAGATGAGA+AGG	0.544662	1:+79468973	None:intergenic
GTTTCAAGTTGGAGGAAGCA+AGG	0.549136	1:-79468331	MsaT005255.1:CDS
TCAAGAAGCTTACATGAGAA+TGG	0.550878	1:-79465440	MsaT005255.1:CDS
TTAAGATCATATCAGATAGA+GGG	0.551520	1:-79464325	MsaT005255.1:CDS
GTCGAGGTTCAAGCTCACTT+GGG	0.554200	1:-79461345	MsaT005255.1:CDS
ATCAACTCGGTCTGCAAAGG+GGG	0.555422	1:+79463303	None:intergenic
CATCGGTTAAATGAGCTTCA+AGG	0.558068	1:-79468281	MsaT005255.1:intron
GAGTGAGCTACAATGGATGC+AGG	0.559731	1:-79461077	MsaT005255.1:CDS
TAATCAATTGAGGAAGAGAC+GGG	0.561344	1:-79467190	MsaT005255.1:CDS
AGGAGGAATATTCAGGAGAG+GGG	0.562238	1:-79463912	MsaT005255.1:CDS
TCGAGGAGATGAGAAGGAAG+AGG	0.562339	1:+79468979	None:intergenic
TGAGAGAAAAGCAATAAAGG+AGG	0.564334	1:-79463929	MsaT005255.1:CDS
AGAGCATGAATTGCCAGATT+GGG	0.565544	1:-79461197	MsaT005255.1:CDS
TAGTCTCCCACAAAGAGGTA+AGG	0.566070	1:+79462360	None:intergenic
ATTGCCTTCAAGCAGGGGAG+AGG	0.566364	1:-79468122	MsaT005255.1:CDS
ATCAAAATCAGATTCGGCAT+CGG	0.566399	1:-79468298	MsaT005255.1:CDS
TCAACGAAAACTGAAGAAAG+AGG	0.570765	1:-79462150	MsaT005255.1:CDS
GGCAGAGTTGGTTTGGACAA+CGG	0.571123	1:-79463024	MsaT005255.1:intron
GCTTGAACTTTATGGACTGA+AGG	0.571172	1:-79468080	MsaT005255.1:intron
AGAATTGTACCTATTGTCCA+AGG	0.572269	1:+79463756	None:intergenic
GAGACGATAGATGGAAGAAA+CGG	0.575183	1:+79468954	None:intergenic
ATAATCAATTGAGGAAGAGA+CGG	0.576663	1:-79467191	MsaT005255.1:CDS
GAGGACCGAGCACATCGCAT+TGG	0.577318	1:-79461976	MsaT005255.1:CDS
GACGCGAAAGTCATTCAGGC+AGG	0.578983	1:-79461862	MsaT005255.1:CDS
CCTTTGGAGCAACAATCAAG+TGG	0.580581	1:+79464170	None:intergenic
TAGTGTGGGGTCAGTTGAAG+AGG	0.580981	1:-79461920	MsaT005255.1:CDS
TGGATGCAGGCTATGGAGAA+TGG	0.581371	1:-79461064	MsaT005255.1:CDS
CAGTCAACAAAAGTCTTCGT+TGG	0.581585	1:+79463428	None:intergenic
TCAAATGTGATATGTCAGCC+TGG	0.581914	1:-79463080	MsaT005255.1:CDS
AGATGGAAGAAACGGAGTCG+AGG	0.585880	1:+79468962	None:intergenic
ATACATTGAGTGAGCTACAA+TGG	0.588022	1:-79461084	MsaT005255.1:CDS
CTGCAAACTGTTCTGAATTG+GGG	0.589467	1:+79463402	None:intergenic
TACAGAAAATGACAGAACTT+GGG	0.593692	1:-79460903	MsaT005255.1:CDS
AAGGACTTCAAACATTCAGA+TGG	0.595277	1:-79465328	MsaT005255.1:CDS
CCTTGCTGCTCGATCAGATG+AGG	0.595520	1:-79461290	MsaT005255.1:CDS
TCAAAGAGATTCAAGCCTGA+AGG	0.596565	1:-79460854	MsaT005255.1:CDS
GACTTTGTAACTGGAGCTCG+CGG	0.596770	1:+79466549	None:intergenic
TCGAGGTTCAAGCTCACTTG+GGG	0.597914	1:-79461344	MsaT005255.1:CDS
ATAGATTCTGATCACAATGA+TGG	0.598466	1:-79465205	MsaT005255.1:CDS
GGACAGAAGAGAAATGTTGG+AGG	0.599485	1:-79461377	MsaT005255.1:CDS
CTCCAACTCCATAAAATGGA+CGG	0.599520	1:+79467235	None:intergenic
TCAGTCCATAAAGTTCAAGC+AGG	0.599564	1:+79468083	None:intergenic
GGCATGGAAGGCAAAGACAA+AGG	0.600109	1:-79465510	MsaT005255.1:CDS
ATGTGCATCAGGTTTCAAGT+TGG	0.600166	1:-79468342	MsaT005255.1:CDS
AGTATGACCTGAGATTTCCC+AGG	0.601582	1:+79463102	None:intergenic
CTCCCACAAAGAGGTAAGGA+TGG	0.601658	1:+79462364	None:intergenic
TTTGTGAGAAAAGGAGGACT+CGG	0.601829	1:+79462244	None:intergenic
TCTCCACCTTGAAGTATAGA+CGG	0.602278	1:+79464349	None:intergenic
TATTCTTTATGATGGACGGA+TGG	0.604900	1:-79463953	MsaT005255.1:CDS
CCAGAATTGCCTTCAAGCAG+GGG	0.605718	1:-79468127	MsaT005255.1:intron
GTGCTATGCTGTCAGATGAG+AGG	0.606802	1:+79460987	None:intergenic
TGAAAGCATATTACAGTCGA+GGG	0.607958	1:-79460939	MsaT005255.1:CDS
CTTTGGAGCAACAATCAAGT+GGG	0.609578	1:+79464171	None:intergenic
GAGTCATTTGTGAGAAAAGG+AGG	0.609743	1:+79462238	None:intergenic
TAATTGTGGATGAAGGTCAT+CGG	0.611050	1:-79463810	MsaT005255.1:CDS
TTTCAAGTTGGAGGAAGCAA+GGG	0.614113	1:-79468330	MsaT005255.1:CDS
ATGAAAGCATATTACAGTCG+AGG	0.614692	1:-79460940	MsaT005255.1:CDS
TAAGAGAAACATAAAGTATG+GGG	0.614998	1:+79462095	None:intergenic
GGTTCAGCATCCGAGAGTAG+AGG	0.615085	1:-79460722	MsaT005255.1:CDS
GAGGAAGAGACGGGATTCTG+AGG	0.617487	1:-79467181	MsaT005255.1:intron
TTGAATGTGCATATCCTGAC+CGG	0.618584	1:-79467290	MsaT005255.1:CDS
CTATGCTGTCAGATGAGAGG+TGG	0.620566	1:+79460990	None:intergenic
AGTTGGAGATCCATTTGCCA+TGG	0.620794	1:-79467220	MsaT005255.1:CDS
AGATCAAGCCATCTTGGTCA+GGG	0.623362	1:-79460743	MsaT005255.1:CDS
TGGATGCTGATAATCAATTG+AGG	0.625059	1:-79467200	MsaT005255.1:CDS
GAGCGTGCGAAACAAAAGAT+GGG	0.626110	1:-79461889	MsaT005255.1:CDS
TATCATAGTCTCCCACAAAG+AGG	0.628685	1:+79462355	None:intergenic
ATGCTGAACCCTGACCAAGA+TGG	0.632570	1:+79460735	None:intergenic
TGGAAGAAGAAAATTAAGCA+GGG	0.637109	1:+79463369	None:intergenic
AAAGGAGGAATATTCAGGAG+AGG	0.640306	1:-79463914	MsaT005255.1:CDS
TAAGATCATATCAGATAGAG+GGG	0.646442	1:-79464324	MsaT005255.1:CDS
GGAATTTATAAGGAATCACC+TGG	0.648040	1:-79465247	MsaT005255.1:CDS
TGATATGTATAAATGTAAGG+AGG	0.649388	1:-79462337	MsaT005255.1:CDS
TATCAACAAGTTACTGACGT+AGG	0.649475	1:-79463045	MsaT005255.1:CDS
TCAGCTTCGGAATCTTCCAA+GGG	0.651733	1:+79465298	None:intergenic
CATGCACACGAGGATGTCAG+TGG	0.652286	1:-79460815	MsaT005255.1:CDS
GCAGGCTATGGAGAATGGTG+GGG	0.652862	1:-79461059	MsaT005255.1:CDS
CTGATAGAGAGACATCAACT+CGG	0.654275	1:+79463290	None:intergenic
ATGCAGGCTATGGAGAATGG+TGG	0.656882	1:-79461061	MsaT005255.1:CDS
ACAAATGGATCAACAAGCCG+AGG	0.658011	1:-79461995	MsaT005255.1:CDS
CCTCATCTGATCGAGCAGCA+AGG	0.662463	1:+79461290	None:intergenic
TTTCCAGAAACATGCACACG+AGG	0.664284	1:-79460825	MsaT005255.1:CDS
TATTCCAGGAGAAAACAGGC+TGG	0.669600	1:+79460780	None:intergenic
GCATCTATATCATCATCACC+AGG	0.670708	1:+79465229	None:intergenic
CATCAACTCGGTCTGCAAAG+GGG	0.672256	1:+79463302	None:intergenic
ACAGCGGCGTTACTGGAAAG+CGG	0.680373	1:-79461132	MsaT005255.1:CDS
CTTTGAAGCAGAGAAAACAG+AGG	0.682748	1:-79466520	MsaT005255.1:CDS
GATCATTGAATTCTCAACGT+GGG	0.696160	1:-79464131	MsaT005255.1:CDS
TATGTTTCTCTTAAGCACCC+GGG	0.702765	1:-79462085	MsaT005255.1:CDS
TCTTTGAGGAAGGAGTGACA+TGG	0.705361	1:+79460870	None:intergenic
CAACCGTCTATACTTCAAGG+TGG	0.705809	1:-79464352	MsaT005255.1:CDS
AAGGCCAAAGATTTCAACAG+CGG	0.709044	1:-79461148	MsaT005255.1:CDS
TTGGAGGTGATTATGCGTCG+AGG	0.709848	1:-79461361	MsaT005255.1:CDS
TTTGGAGCAACAATCAAGTG+GGG	0.712915	1:+79464172	None:intergenic
GGATCATTGAATTCTCAACG+TGG	0.730847	1:-79464132	MsaT005255.1:CDS
ACAAGCCAGTGATAATACAG+GGG	0.752068	1:-79460966	MsaT005255.1:CDS
CATCTGATCGAGCAGCAAGG+CGG	0.764442	1:+79461293	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	79460688	79469079	79460688	ID=MsaG005255
Chr1	mRNA	79460688	79469079	79460688	ID=MsaT005255.1;Parent=MsaG005255
Chr1	exon	79460688	79461403	79460688	ID=MsaT005255.1.exon12;Parent=MsaT005255.1
Chr1	CDS	79460688	79461403	79460688	ID=cds.MsaT005255.1;Parent=MsaT005255.1
Chr1	exon	79461839	79462444	79461839	ID=MsaT005255.1.exon11;Parent=MsaT005255.1
Chr1	CDS	79461839	79462444	79461839	ID=cds.MsaT005255.1;Parent=MsaT005255.1
Chr1	exon	79463025	79463178	79463025	ID=MsaT005255.1.exon10;Parent=MsaT005255.1
Chr1	CDS	79463025	79463178	79463025	ID=cds.MsaT005255.1;Parent=MsaT005255.1
Chr1	exon	79463252	79463459	79463252	ID=MsaT005255.1.exon9;Parent=MsaT005255.1
Chr1	CDS	79463252	79463459	79463252	ID=cds.MsaT005255.1;Parent=MsaT005255.1
Chr1	exon	79463766	79463984	79463766	ID=MsaT005255.1.exon8;Parent=MsaT005255.1
Chr1	CDS	79463766	79463984	79463766	ID=cds.MsaT005255.1;Parent=MsaT005255.1
Chr1	exon	79464124	79464383	79464124	ID=MsaT005255.1.exon7;Parent=MsaT005255.1
Chr1	CDS	79464124	79464383	79464124	ID=cds.MsaT005255.1;Parent=MsaT005255.1
Chr1	exon	79465138	79465536	79465138	ID=MsaT005255.1.exon6;Parent=MsaT005255.1
Chr1	CDS	79465138	79465536	79465138	ID=cds.MsaT005255.1;Parent=MsaT005255.1
Chr1	exon	79466505	79466615	79466505	ID=MsaT005255.1.exon5;Parent=MsaT005255.1
Chr1	CDS	79466505	79466615	79466505	ID=cds.MsaT005255.1;Parent=MsaT005255.1
Chr1	exon	79467182	79467370	79467182	ID=MsaT005255.1.exon4;Parent=MsaT005255.1
Chr1	CDS	79467182	79467370	79467182	ID=cds.MsaT005255.1;Parent=MsaT005255.1
Chr1	exon	79468081	79468145	79468081	ID=MsaT005255.1.exon3;Parent=MsaT005255.1
Chr1	CDS	79468081	79468145	79468081	ID=cds.MsaT005255.1;Parent=MsaT005255.1
Chr1	exon	79468282	79468435	79468282	ID=MsaT005255.1.exon2;Parent=MsaT005255.1
Chr1	CDS	79468282	79468435	79468282	ID=cds.MsaT005255.1;Parent=MsaT005255.1
Chr1	exon	79468939	79469079	79468939	ID=MsaT005255.1.exon1;Parent=MsaT005255.1
Chr1	CDS	79468939	79469079	79468939	ID=cds.MsaT005255.1;Parent=MsaT005255.1

Gene Sequence

>MsaT005255.1

ATGGAAGAAAAGAAAGAAAAGGAACAACAACACACCAAAACACTCATTTCTGCTCTCAACTTTCTCTCTCGCGACGTTCCTCTTCCTTCTCATCTCCTCGACTCCGTTTCTTCCATCTATCGTCTCAACAGCAATGTCAATGGCGATGTAGGGAGTTCTGGAGATGATTTAATAACAGATCTTGAAGATGCATTATCGAAACAACGTCCGAAATGTGCATCAGGTTTCAAGTTGGAGGAAGCAAGGGAAAGCCGTCATCAAAATCAGATTCGGCATCGGTTAAATGAGCTTCAAGAATTGCCTTCAAGCAGGGGAGAGGACCTGCAGACAAAGTGCCTGCTTGAACTTTATGGACTGAAGTTAGCAGAGTTGCAGTCGAAGGTTCGGTCTGATGTGAGTTCTGAATACTGGCTCAATGTTGAATGTGCATATCCTGACCGGAAATTGTTTGATTGGGGCATGATGAGATTACGCCGTCCATTTTATGGAGTTGGAGATCCATTTGCCATGGATGCTGATAATCAATTGAGGAAGAGACGGGATTCTGAGAGACTACAAAAAGAAGGTTTTTTTGCAGAAATGCTAAATTCTGTCCGCGAGCTCCAGTTACAAAGTCAAGCTTCTTTGAAGCAGAGAAAACAGAGGAATGATGGCATCCAGGCATGGCATGGAAGGCAAAGACAAAGGGCAACCCGGGCAGAGAAATTGAGATTCCAAGCCTTGAAGGCCGATGATCAAGAAGCTTACATGAGAATGGTGAAAGAGAGTAAGAATGAAAGATTAACTGTGCTTCTTGAAGAAACAAATAAACTACTTGTAAATTTAGGAGCAGCTGTTCAACGTCAAAAGGACTTCAAACATTCAGATGGCATTGAACCCTTGGAAGATTCCGAAGCTGATTTACCTGAGTCAGATGCTTCAAAGAATGGAATTTATAAGGAATCACCTGGTGATGATGATATAGATGCGATAGATTCTGATCACAATGATGGTGACTCTAACGATTTACTTGAAGGTCAACGACAATACAATTCTGCCATACATTCAATTCAGGAAAAGGTAACTGAGCAACCGTCTATACTTCAAGGTGGAGAATTAAGATCATATCAGATAGAGGGGCTCCAATGGATGCTTTCTTTGTTTAATAACAACTTAAATGGGATTTTGGCTGATGAAATGGGGCTTGGGAAAACAATTCAAACGATTTCTCTCATAGCACATCTTTTCGAATACAAAGGTGTGACTGGTCCCCACTTGATTGTTGCTCCAAAGGCAGTTCTGCCAAACTGGATCATTGAATTCTCAACGTGGGCTCCTAGCATTAAAACTATTCTTTATGATGGACGGATGGATGAGAGAAAAGCAATAAAGGAGGAATATTCAGGAGAGGGGAAATTTAATGTTATGATTACACATTATGATCTTATAATGAGAGACAAAGCGTTTCTCAAGAAAATTAAATGGATCTACTTAATTGTGGATGAAGGTCATCGGTTGAAGAATCATGAGTCTGTTCTAGCAAAAACCTTGGACAATAGCTATCACATCCAACGAAGACTTTTGTTGACTGGTACCCCAATTCAGAACAGTTTGCAGGAATTGTGGTCCCTGCTTAATTTTCTTCTTCCAAGCATTTTCAACTCCGTTCAAAATTTCGAGGACTGGTTCAATGCCCCCTTTGCAGACCGAGTTGATGTCTCTCTATCAGATGAAGAACAACTATTAATCATTCGGCGTCTACATCAAGTAATTAGGCCCTTCATATTAAGAAGGAAAAAAAATGAGGTGGAAAAATTTCTTCCTGGGAAATCTCAGGTCATACTCAAATGTGATATGTCAGCCTGGCAAAAGGTTTATTATCAACAAGTTACTGACGTAGGCAGAGTTGGTTTGGACAACGGTACTGGAAAATCGAAAAGTCTACAGAACTTAACGATGCAACTCAGAAAGTGTTGTAACCATCCTTACCTCTTTGTGGGAGACTATGATATGTATAAATGTAAGGAGGAGATTGTCAGAGCATCAGGTAAGTTTGAACTTCTTGACCGTTTGCTCCCAAAACTTCGCAGAGCTGGTCACCGAGTCCTCCTTTTCTCACAAATGACTCGACTCATGGACACTCTCGAAGTTTATTTACGGCTTCATGATTTCAAGTATCTTAGACTTGATGGCTCAACGAAAACTGAAGAAAGAGGCTCTCTACTACGAAAATTTAATGCTCCTGACTCCCCATACTTTATGTTTCTCTTAAGCACCCGGGCAGGCGGTCTTGGTTTGAACTTACAAACAGCAGATACTGTTATAATCTTCGACAGTGATTGGAACCCACAAATGGATCAACAAGCCGAGGACCGAGCACATCGCATTGGACAAAAAAAGGAAGTTCGGGTTTTCGTGTTGGTTAGTGTGGGGTCAGTTGAAGAGGTGATTTTAGAGCGTGCGAAACAAAAGATGGGTATTGACGCGAAAGTCATTCAGGCAGGACTTTTCAATACAACTTCGACAGCCCAGGACAGAAGAGAAATGTTGGAGGTGATTATGCGTCGAGGTTCAAGCTCACTTGGGGCAGATGTGCCTAGCGAGAGAGAAATTAACCGCCTTGCTGCTCGATCAGATGAGGAATTTTGGCTGTTCGAGAAAATGGACGAAGAGAGAAGACAAAAGGAAAACTACAGATCACGTCTCATGGAAGAGCATGAATTGCCAGATTGGGTGTATGCTCCAATTAAAAAGGATGACAAGGCCAAAGATTTCAACAGCGGCGTTACTGGAAAGCGGAAAAGAAAAGATGTGATATATGCTGATACATTGAGTGAGCTACAATGGATGCAGGCTATGGAGAATGGTGGGGACATGTCAAAGCTTTCAGCTAAAGGGAAAAGAAGAGAGTCAAGAGACCACCTCTCATCTGACAGCATAGCACAAGCCAGTGATAATACAGGGGCAGATGAAAGCATATTACAGTCGAGGGCTAAAATTATCCCTACAGAAAATGACAGAACTTGGGAAGATAGTTTCCATGTCACTCCTTCCTCAAAGAGATTCAAGCCTGAAGGAACAAATTTCCAGAAACATGCACACGAGGATGTCAGTGGAAGTGGATTGGACCAGCCTGTTTTCTCCTGGAATATTCACAAAAAGAAGAGATCAAGCCATCTTGGTCAGGGTTCAGCATCCGAGAGTAGAGGACATAATTCAAATGGAAGAGCAAACTGGAACTGA

Protein sequence

>MsaT005255.1

MEEKKEKEQQHTKTLISALNFLSRDVPLPSHLLDSVSSIYRLNSNVNGDVGSSGDDLITDLEDALSKQRPKCASGFKLEEARESRHQNQIRHRLNELQELPSSRGEDLQTKCLLELYGLKLAELQSKVRSDVSSEYWLNVECAYPDRKLFDWGMMRLRRPFYGVGDPFAMDADNQLRKRRDSERLQKEGFFAEMLNSVRELQLQSQASLKQRKQRNDGIQAWHGRQRQRATRAEKLRFQALKADDQEAYMRMVKESKNERLTVLLEETNKLLVNLGAAVQRQKDFKHSDGIEPLEDSEADLPESDASKNGIYKESPGDDDIDAIDSDHNDGDSNDLLEGQRQYNSAIHSIQEKVTEQPSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLFEYKGVTGPHLIVAPKAVLPNWIIEFSTWAPSIKTILYDGRMDERKAIKEEYSGEGKFNVMITHYDLIMRDKAFLKKIKWIYLIVDEGHRLKNHESVLAKTLDNSYHIQRRLLLTGTPIQNSLQELWSLLNFLLPSIFNSVQNFEDWFNAPFADRVDVSLSDEEQLLIIRRLHQVIRPFILRRKKNEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDNGTGKSKSLQNLTMQLRKCCNHPYLFVGDYDMYKCKEEIVRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDTLEVYLRLHDFKYLRLDGSTKTEERGSLLRKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLEVIMRRGSSSLGADVPSEREINRLAARSDEEFWLFEKMDEERRQKENYRSRLMEEHELPDWVYAPIKKDDKAKDFNSGVTGKRKRKDVIYADTLSELQWMQAMENGGDMSKLSAKGKRRESRDHLSSDSIAQASDNTGADESILQSRAKIIPTENDRTWEDSFHVTPSSKRFKPEGTNFQKHAHEDVSGSGLDQPVFSWNIHKKKRSSHLGQGSASESRGHNSNGRANWN*