Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG005314 | XP_003628107.1 | 92.405 | 237 | 18 | 0 | 1 | 237 | 1 | 237 | 4.66e-160 | 452 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG005314 | sp|Q9FKK2|AGL62_ARATH | 53.723 | 188 | 80 | 3 | 5 | 189 | 3 | 186 | 7.68e-60 | 193 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG005314 | tr|G7L6X5|G7L6X5_MEDTR | 92.405 | 237 | 18 | 0 | 1 | 237 | 1 | 237 | 2.23e-160 | 452 |
Gene ID | Type | Classification |
---|---|---|
MsaG005314 | TF | MADS-M-type |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG004921 | MsaG005314 | 0.802199 | 1.055102e-48 | 1.499348e-46 |
MsaG020137 | MsaG005314 | 0.816414 | 9.717703e-52 | 1.947133e-49 |
MsaG021296 | MsaG005314 | 0.816429 | 9.641594e-52 | 1.932614e-49 |
MsaG027046 | MsaG005314 | 0.809727 | 2.802169e-50 | 4.753767e-48 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG005314 | MtrunA17_Chr8g0355091 | 92.405 | 237 | 18 | 0 | 1 | 237 | 1 | 237 | 4.29e-164 | 452 |
MsaG005314 | MtrunA17_Chr1g0206701 | 95.982 | 224 | 9 | 0 | 1 | 224 | 1 | 224 | 5.84e-162 | 447 |
MsaG005314 | MtrunA17_Chr1g0206721 | 90.868 | 219 | 20 | 0 | 1 | 219 | 1 | 219 | 3.11e-150 | 417 |
MsaG005314 | MtrunA17_Chr2g0292791 | 88.608 | 237 | 27 | 0 | 1 | 237 | 1 | 237 | 8.54e-149 | 414 |
MsaG005314 | MtrunA17_Chr1g0149391 | 89.451 | 237 | 25 | 0 | 1 | 237 | 1 | 237 | 9.96e-147 | 409 |
MsaG005314 | MtrunA17_Chr3g0099421 | 85.388 | 219 | 32 | 0 | 1 | 219 | 26 | 244 | 2.90e-141 | 395 |
MsaG005314 | MtrunA17_Chr1g0206691 | 85.000 | 220 | 33 | 0 | 18 | 237 | 1 | 220 | 5.66e-139 | 388 |
MsaG005314 | MtrunA17_Chr3g0099411 | 80.365 | 219 | 24 | 1 | 1 | 219 | 1 | 200 | 1.53e-124 | 352 |
MsaG005314 | MtrunA17_Chr2g0300441 | 71.730 | 237 | 66 | 1 | 1 | 237 | 1 | 236 | 2.08e-121 | 345 |
MsaG005314 | MtrunA17_Chr3g0089141 | 72.650 | 234 | 46 | 3 | 1 | 224 | 1 | 226 | 2.87e-117 | 334 |
MsaG005314 | MtrunA17_Chr1g0208561 | 72.650 | 234 | 46 | 3 | 1 | 224 | 1 | 226 | 3.23e-116 | 331 |
MsaG005314 | MtrunA17_Chr1g0206991 | 86.264 | 182 | 25 | 0 | 1 | 182 | 1 | 182 | 8.99e-116 | 328 |
MsaG005314 | MtrunA17_Chr5g0422941 | 65.401 | 237 | 82 | 0 | 1 | 237 | 1 | 237 | 9.59e-115 | 328 |
MsaG005314 | MtrunA17_Chr2g0325971 | 72.222 | 234 | 47 | 3 | 1 | 224 | 1 | 226 | 1.03e-114 | 327 |
MsaG005314 | MtrunA17_Chr1g0188671 | 68.889 | 225 | 70 | 0 | 1 | 225 | 39 | 263 | 3.12e-114 | 328 |
MsaG005314 | MtrunA17_Chr2g0317451 | 65.254 | 236 | 82 | 0 | 1 | 236 | 1 | 236 | 6.01e-113 | 323 |
MsaG005314 | MtrunA17_Chr1g0187361 | 69.196 | 224 | 69 | 0 | 1 | 224 | 1 | 224 | 8.35e-113 | 323 |
MsaG005314 | MtrunA17_Chr2g0317481 | 65.254 | 236 | 82 | 0 | 1 | 236 | 1 | 236 | 1.54e-112 | 322 |
MsaG005314 | MtrunA17_Chr1g0208581 | 74.074 | 216 | 48 | 1 | 1 | 216 | 1 | 208 | 2.03e-111 | 319 |
MsaG005314 | MtrunA17_Chr5g0422421 | 67.857 | 224 | 72 | 0 | 1 | 224 | 1 | 224 | 1.90e-110 | 317 |
MsaG005314 | MtrunA17_Chr5g0419601 | 67.932 | 237 | 76 | 0 | 1 | 237 | 1 | 237 | 4.52e-110 | 316 |
MsaG005314 | MtrunA17_Chr7g0238991 | 65.471 | 223 | 75 | 2 | 16 | 237 | 27 | 248 | 3.19e-99 | 289 |
MsaG005314 | MtrunA17_Chr2g0300421 | 65.644 | 163 | 55 | 1 | 1 | 162 | 1 | 163 | 2.87e-68 | 207 |
MsaG005314 | MtrunA17_Chr3g0085241 | 51.323 | 189 | 82 | 1 | 3 | 191 | 35 | 213 | 2.43e-65 | 202 |
MsaG005314 | MtrunA17_Chr3g0089151 | 75.194 | 129 | 32 | 0 | 1 | 129 | 1 | 129 | 1.67e-64 | 196 |
MsaG005314 | MtrunA17_Chr3g0119901 | 52.222 | 180 | 85 | 1 | 7 | 186 | 7 | 185 | 3.66e-64 | 198 |
MsaG005314 | MtrunA17_Chr3g0111931 | 67.647 | 102 | 33 | 0 | 21 | 122 | 2 | 103 | 1.06e-45 | 148 |
MsaG005314 | MtrunA17_Chr2g0333981 | 40.351 | 171 | 92 | 2 | 5 | 172 | 8 | 171 | 2.51e-41 | 139 |
MsaG005314 | MtrunA17_Chr8g0379021 | 42.169 | 166 | 86 | 2 | 5 | 167 | 8 | 166 | 4.99e-41 | 138 |
MsaG005314 | MtrunA17_Chr4g0018951 | 45.806 | 155 | 72 | 3 | 5 | 159 | 8 | 150 | 4.07e-36 | 125 |
MsaG005314 | MtrunA17_Chr1g0187351 | 81.818 | 66 | 12 | 0 | 18 | 83 | 1 | 66 | 4.00e-33 | 114 |
MsaG005314 | MtrunA17_Chr4g0071601 | 39.227 | 181 | 90 | 4 | 5 | 172 | 8 | 181 | 4.55e-32 | 115 |
MsaG005314 | MtrunA17_Chr3g0111841 | 86.441 | 59 | 8 | 0 | 15 | 73 | 2 | 60 | 9.91e-31 | 108 |
MsaG005314 | MtrunA17_Chr3g0111831 | 72.131 | 61 | 17 | 0 | 16 | 76 | 11 | 71 | 3.87e-25 | 94.7 |
MsaG005314 | MtrunA17_Chr1g0175601 | 45.946 | 111 | 57 | 2 | 9 | 118 | 2 | 110 | 2.98e-24 | 95.1 |
MsaG005314 | MtrunA17_Chr1g0169761 | 60.870 | 69 | 27 | 0 | 9 | 77 | 2 | 70 | 1.41e-23 | 93.6 |
MsaG005314 | MtrunA17_Chr8g0376821 | 60.870 | 69 | 27 | 0 | 9 | 77 | 2 | 70 | 3.81e-23 | 92.4 |
MsaG005314 | MtrunA17_Chr4g0074101 | 40.517 | 116 | 54 | 3 | 9 | 109 | 2 | 117 | 8.52e-23 | 92.0 |
MsaG005314 | MtrunA17_Chr8g0357771 | 42.063 | 126 | 68 | 2 | 9 | 131 | 2 | 125 | 1.72e-22 | 90.5 |
MsaG005314 | MtrunA17_Chr1g0175611 | 45.545 | 101 | 53 | 1 | 9 | 109 | 2 | 100 | 2.14e-22 | 90.1 |
MsaG005314 | MtrunA17_Chr1g0180591 | 45.536 | 112 | 56 | 3 | 9 | 118 | 2 | 110 | 2.16e-22 | 90.5 |
MsaG005314 | MtrunA17_Chr8g0356071 | 40.171 | 117 | 63 | 2 | 9 | 125 | 2 | 111 | 2.96e-21 | 87.0 |
MsaG005314 | MtrunA17_Chr4g0052061 | 41.509 | 106 | 60 | 1 | 9 | 114 | 2 | 105 | 2.46e-20 | 84.3 |
MsaG005314 | MtrunA17_Chr4g0049901 | 33.333 | 165 | 87 | 3 | 10 | 153 | 29 | 191 | 3.41e-19 | 83.2 |
MsaG005314 | MtrunA17_Chr3g0077501 | 52.941 | 68 | 32 | 0 | 9 | 76 | 2 | 69 | 4.90e-19 | 82.4 |
MsaG005314 | MtrunA17_Chr3g0097101 | 42.453 | 106 | 51 | 1 | 3 | 108 | 11 | 106 | 9.17e-19 | 82.4 |
MsaG005314 | MtrunA17_Chr4g0052081 | 41.509 | 106 | 61 | 1 | 9 | 113 | 2 | 107 | 1.93e-18 | 79.7 |
MsaG005314 | MtrunA17_Chr4g0057151 | 50.685 | 73 | 36 | 0 | 10 | 82 | 3 | 75 | 3.98e-18 | 79.7 |
MsaG005314 | MtrunA17_Chr5g0427401 | 51.471 | 68 | 33 | 0 | 9 | 76 | 2 | 69 | 1.25e-17 | 79.0 |
MsaG005314 | MtrunA17_Chr6g0474371 | 49.275 | 69 | 34 | 1 | 9 | 76 | 2 | 70 | 1.71e-17 | 77.8 |
MsaG005314 | MtrunA17_Chr2g0284911 | 30.270 | 185 | 100 | 4 | 9 | 167 | 17 | 198 | 2.26e-17 | 78.6 |
MsaG005314 | MtrunA17_Chr3g0134451 | 33.333 | 171 | 90 | 6 | 9 | 162 | 2 | 165 | 2.46e-17 | 79.3 |
MsaG005314 | MtrunA17_Chr8g0351051 | 51.471 | 68 | 33 | 0 | 9 | 76 | 2 | 69 | 2.71e-17 | 78.6 |
MsaG005314 | MtrunA17_Chr8g0351041 | 47.436 | 78 | 41 | 0 | 10 | 87 | 3 | 80 | 3.15e-17 | 76.3 |
MsaG005314 | MtrunA17_Chr8g0380021 | 51.471 | 68 | 33 | 0 | 9 | 76 | 18 | 85 | 4.05e-17 | 77.8 |
MsaG005314 | MtrunA17_Chr5g0412271 | 29.384 | 211 | 130 | 6 | 9 | 201 | 2 | 211 | 5.27e-17 | 77.0 |
MsaG005314 | MtrunA17_Chr2g0279821 | 48.529 | 68 | 35 | 0 | 9 | 76 | 2 | 69 | 1.02e-16 | 76.6 |
MsaG005314 | MtrunA17_Chr4g0061691 | 47.826 | 69 | 35 | 1 | 9 | 76 | 2 | 70 | 1.08e-16 | 76.3 |
MsaG005314 | MtrunA17_Chr5g0412461 | 28.169 | 213 | 129 | 6 | 9 | 201 | 2 | 210 | 1.16e-16 | 76.3 |
MsaG005314 | MtrunA17_Chr1g0204111 | 50.000 | 68 | 34 | 0 | 9 | 76 | 18 | 85 | 1.44e-16 | 76.6 |
MsaG005314 | MtrunA17_Chr8g0345001 | 32.911 | 158 | 93 | 3 | 8 | 159 | 17 | 167 | 1.65e-16 | 74.7 |
MsaG005314 | MtrunA17_Chr8g0351031 | 47.436 | 78 | 41 | 0 | 10 | 87 | 3 | 80 | 1.71e-16 | 75.9 |
MsaG005314 | MtrunA17_Chr7g0246431 | 38.182 | 110 | 66 | 1 | 10 | 119 | 3 | 110 | 1.90e-16 | 75.5 |
MsaG005314 | MtrunA17_Chr4g0020221 | 51.471 | 68 | 33 | 0 | 9 | 76 | 2 | 69 | 5.63e-16 | 74.7 |
MsaG005314 | MtrunA17_Chr4g0049541 | 47.059 | 68 | 36 | 0 | 9 | 76 | 2 | 69 | 7.23e-16 | 73.9 |
MsaG005314 | MtrunA17_Chr6g0455511 | 49.275 | 69 | 34 | 1 | 9 | 76 | 2 | 70 | 9.40e-16 | 74.3 |
MsaG005314 | MtrunA17_Chr8g0366231 | 40.964 | 83 | 46 | 1 | 9 | 91 | 2 | 81 | 1.05e-15 | 73.9 |
MsaG005314 | MtrunA17_Chr7g0220111 | 49.275 | 69 | 34 | 1 | 9 | 76 | 2 | 70 | 1.09e-15 | 73.9 |
MsaG005314 | MtrunA17_Chr7g0220121 | 25.822 | 213 | 144 | 5 | 9 | 207 | 2 | 214 | 1.72e-15 | 73.6 |
MsaG005314 | MtrunA17_Chr5g0404951 | 50.000 | 70 | 33 | 1 | 9 | 76 | 2 | 71 | 1.85e-15 | 73.2 |
MsaG005314 | MtrunA17_Chr5g0411691 | 48.529 | 68 | 35 | 0 | 9 | 76 | 2 | 69 | 2.02e-15 | 73.2 |
MsaG005314 | MtrunA17_Chr1g0173161 | 52.459 | 61 | 29 | 0 | 9 | 69 | 2 | 62 | 2.17e-15 | 69.3 |
MsaG005314 | MtrunA17_Chr5g0420081 | 45.070 | 71 | 36 | 1 | 9 | 79 | 2 | 69 | 2.71e-15 | 72.8 |
MsaG005314 | MtrunA17_Chr5g0425191 | 56.604 | 53 | 23 | 0 | 9 | 61 | 2 | 54 | 3.18e-15 | 69.3 |
MsaG005314 | MtrunA17_Chr2g0308251 | 47.826 | 69 | 36 | 0 | 9 | 77 | 2 | 70 | 3.99e-15 | 68.6 |
MsaG005314 | MtrunA17_Chr3g0093131 | 33.566 | 143 | 78 | 4 | 26 | 159 | 36 | 170 | 6.06e-15 | 70.9 |
MsaG005314 | MtrunA17_Chr5g0420091 | 47.826 | 69 | 35 | 1 | 9 | 76 | 2 | 70 | 7.26e-15 | 71.2 |
MsaG005314 | MtrunA17_Chr4g0044071 | 52.632 | 57 | 27 | 0 | 9 | 65 | 2 | 58 | 8.81e-15 | 68.6 |
MsaG005314 | MtrunA17_Chr8g0377561 | 53.571 | 56 | 26 | 0 | 9 | 64 | 2 | 57 | 1.51e-14 | 67.4 |
MsaG005314 | MtrunA17_Chr3g0122251 | 41.237 | 97 | 54 | 1 | 9 | 105 | 2 | 95 | 1.85e-14 | 70.5 |
MsaG005314 | MtrunA17_Chr1g0164791 | 47.143 | 70 | 35 | 1 | 9 | 76 | 2 | 71 | 2.68e-14 | 69.7 |
MsaG005314 | MtrunA17_Chr3g0125241 | 44.286 | 70 | 37 | 1 | 9 | 76 | 27 | 96 | 2.73e-14 | 69.3 |
MsaG005314 | MtrunA17_Chr1g0159661 | 46.970 | 66 | 34 | 1 | 9 | 74 | 2 | 66 | 2.78e-14 | 68.9 |
MsaG005314 | MtrunA17_Chr4g0061671 | 50.877 | 57 | 28 | 0 | 9 | 65 | 2 | 58 | 3.40e-14 | 68.6 |
MsaG005314 | MtrunA17_Chr7g0246381 | 52.632 | 57 | 27 | 0 | 9 | 65 | 2 | 58 | 5.53e-14 | 65.1 |
MsaG005314 | MtrunA17_Chr5g0427921 | 49.123 | 57 | 29 | 0 | 9 | 65 | 2 | 58 | 7.22e-14 | 64.3 |
MsaG005314 | MtrunA17_Chr3g0142191 | 47.619 | 63 | 33 | 0 | 9 | 71 | 2 | 64 | 1.35e-13 | 67.8 |
MsaG005314 | MtrunA17_Chr4g0025531 | 32.278 | 158 | 95 | 3 | 5 | 162 | 5 | 150 | 1.02e-12 | 65.5 |
MsaG005314 | MtrunA17_Chr4g0060841 | 26.738 | 187 | 115 | 7 | 9 | 183 | 2 | 178 | 2.41e-12 | 65.5 |
MsaG005314 | MtrunA17_Chr5g0417661 | 42.029 | 69 | 34 | 1 | 9 | 77 | 57 | 119 | 6.50e-12 | 61.2 |
MsaG005314 | MtrunA17_Chr4g0018421 | 40.000 | 70 | 41 | 1 | 9 | 77 | 2 | 71 | 1.09e-11 | 62.0 |
MsaG005314 | MtrunA17_Chr2g0302091 | 32.075 | 159 | 80 | 7 | 7 | 155 | 36 | 176 | 2.06e-11 | 61.2 |
MsaG005314 | MtrunA17_Chr1g0166611 | 34.513 | 113 | 64 | 2 | 20 | 132 | 17 | 119 | 5.43e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG005314 | AT5G60440.1 | 53.723 | 188 | 80 | 3 | 5 | 189 | 3 | 186 | 7.80e-61 | 193 |
MsaG005314 | AT2G24840.1 | 49.080 | 163 | 72 | 4 | 6 | 162 | 60 | 217 | 2.70e-43 | 147 |
MsaG005314 | AT1G65360.1 | 38.667 | 225 | 123 | 6 | 5 | 223 | 3 | 218 | 5.14e-40 | 137 |
MsaG005314 | AT1G01530.1 | 40.000 | 210 | 103 | 4 | 4 | 192 | 2 | 209 | 1.00e-39 | 137 |
MsaG005314 | AT4G36590.1 | 45.732 | 164 | 79 | 4 | 5 | 160 | 3 | 164 | 1.93e-38 | 134 |
MsaG005314 | AT2G34440.1 | 45.299 | 117 | 55 | 2 | 9 | 121 | 2 | 113 | 6.62e-27 | 102 |
MsaG005314 | AT3G66656.1 | 41.985 | 131 | 71 | 2 | 9 | 134 | 2 | 132 | 7.93e-26 | 99.8 |
MsaG005314 | AT3G04100.1 | 31.579 | 152 | 100 | 2 | 2 | 149 | 7 | 158 | 1.04e-24 | 97.4 |
MsaG005314 | AT1G72350.1 | 35.374 | 147 | 62 | 3 | 9 | 155 | 43 | 156 | 7.75e-23 | 93.2 |
MsaG005314 | AT1G28460.1 | 31.429 | 140 | 93 | 1 | 5 | 141 | 4 | 143 | 1.32e-19 | 83.6 |
MsaG005314 | AT4G22950.2 | 49.351 | 77 | 39 | 0 | 10 | 86 | 3 | 79 | 3.25e-19 | 82.0 |
MsaG005314 | AT4G18960.1 | 28.689 | 244 | 136 | 8 | 5 | 226 | 15 | 242 | 4.14e-19 | 83.6 |
MsaG005314 | AT4G09960.2 | 46.512 | 86 | 45 | 1 | 9 | 93 | 2 | 87 | 4.26e-19 | 82.8 |
MsaG005314 | AT4G09960.1 | 46.512 | 86 | 45 | 1 | 9 | 93 | 2 | 87 | 4.84e-19 | 83.2 |
MsaG005314 | AT4G09960.6 | 46.512 | 86 | 45 | 1 | 9 | 93 | 3 | 88 | 4.97e-19 | 83.2 |
MsaG005314 | AT4G09960.5 | 46.512 | 86 | 45 | 1 | 9 | 93 | 12 | 97 | 6.87e-19 | 82.8 |
MsaG005314 | AT4G09960.3 | 46.512 | 86 | 45 | 1 | 9 | 93 | 28 | 113 | 9.03e-19 | 82.8 |
MsaG005314 | AT2G45650.1 | 52.941 | 68 | 32 | 0 | 9 | 76 | 2 | 69 | 1.18e-18 | 82.4 |
MsaG005314 | AT2G45660.2 | 52.941 | 68 | 32 | 0 | 10 | 77 | 3 | 70 | 1.32e-18 | 80.1 |
MsaG005314 | AT4G22950.3 | 50.000 | 76 | 38 | 0 | 10 | 85 | 3 | 78 | 1.38e-18 | 81.6 |
MsaG005314 | AT4G22950.1 | 50.000 | 76 | 38 | 0 | 10 | 85 | 3 | 78 | 1.38e-18 | 81.6 |
MsaG005314 | AT1G29962.1 | 29.070 | 172 | 115 | 4 | 5 | 169 | 4 | 175 | 2.68e-18 | 80.1 |
MsaG005314 | AT4G09960.4 | 46.512 | 86 | 45 | 1 | 9 | 93 | 97 | 182 | 3.11e-18 | 82.4 |
MsaG005314 | AT2G45660.1 | 52.941 | 68 | 32 | 0 | 10 | 77 | 3 | 70 | 3.55e-18 | 80.5 |
MsaG005314 | AT2G22540.3 | 51.471 | 68 | 33 | 0 | 9 | 76 | 2 | 69 | 1.90e-17 | 79.0 |
MsaG005314 | AT2G22540.1 | 51.471 | 68 | 33 | 0 | 9 | 76 | 2 | 69 | 1.90e-17 | 79.0 |
MsaG005314 | AT5G51870.2 | 53.731 | 67 | 31 | 0 | 10 | 76 | 3 | 69 | 2.43e-17 | 77.0 |
MsaG005314 | AT5G51870.1 | 53.731 | 67 | 31 | 0 | 10 | 76 | 3 | 69 | 3.00e-17 | 77.8 |
MsaG005314 | AT4G24540.1 | 36.567 | 134 | 73 | 4 | 9 | 132 | 2 | 133 | 4.26e-17 | 77.8 |
MsaG005314 | AT3G57230.2 | 47.059 | 68 | 36 | 0 | 9 | 76 | 2 | 69 | 4.26e-17 | 75.9 |
MsaG005314 | AT2G42830.1 | 47.368 | 76 | 40 | 0 | 1 | 76 | 9 | 84 | 5.26e-17 | 77.8 |
MsaG005314 | AT5G51870.5 | 50.000 | 72 | 36 | 0 | 5 | 76 | 21 | 92 | 5.97e-17 | 76.6 |
MsaG005314 | AT2G42830.2 | 47.368 | 76 | 40 | 0 | 1 | 76 | 9 | 84 | 6.13e-17 | 77.8 |
MsaG005314 | AT1G22130.1 | 36.441 | 118 | 73 | 2 | 9 | 125 | 2 | 118 | 6.62e-17 | 79.0 |
MsaG005314 | AT5G51870.4 | 53.731 | 67 | 31 | 0 | 10 | 76 | 3 | 69 | 6.77e-17 | 77.0 |
MsaG005314 | AT3G58780.1 | 50.704 | 71 | 35 | 0 | 6 | 76 | 14 | 84 | 7.06e-17 | 77.4 |
MsaG005314 | AT3G58780.5 | 50.704 | 71 | 35 | 0 | 6 | 76 | 20 | 90 | 7.19e-17 | 77.8 |
MsaG005314 | AT5G51870.3 | 53.731 | 67 | 31 | 0 | 10 | 76 | 13 | 79 | 7.95e-17 | 77.0 |
MsaG005314 | AT3G61120.1 | 51.471 | 68 | 33 | 0 | 9 | 76 | 2 | 69 | 8.57e-17 | 77.4 |
MsaG005314 | AT5G10140.2 | 50.725 | 69 | 33 | 1 | 9 | 76 | 2 | 70 | 9.03e-17 | 75.5 |
MsaG005314 | AT3G57390.3 | 50.000 | 68 | 34 | 0 | 9 | 76 | 2 | 69 | 9.53e-17 | 76.6 |
MsaG005314 | AT5G62165.14 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 9.71e-17 | 73.9 |
MsaG005314 | AT4G37940.4 | 48.529 | 68 | 35 | 0 | 9 | 76 | 2 | 69 | 1.02e-16 | 76.6 |
MsaG005314 | AT4G37940.1 | 48.529 | 68 | 35 | 0 | 9 | 76 | 2 | 69 | 1.13e-16 | 76.6 |
MsaG005314 | AT4G37940.3 | 48.529 | 68 | 35 | 0 | 9 | 76 | 2 | 69 | 1.25e-16 | 75.5 |
MsaG005314 | AT1G77980.1 | 38.095 | 105 | 64 | 1 | 9 | 112 | 2 | 106 | 1.30e-16 | 78.2 |
MsaG005314 | AT1G77950.3 | 47.368 | 76 | 38 | 2 | 9 | 83 | 2 | 76 | 1.32e-16 | 77.0 |
MsaG005314 | AT1G77950.2 | 47.368 | 76 | 38 | 2 | 9 | 83 | 2 | 76 | 1.32e-16 | 77.0 |
MsaG005314 | AT1G77950.1 | 47.368 | 76 | 38 | 2 | 9 | 83 | 2 | 76 | 1.32e-16 | 77.0 |
MsaG005314 | AT1G77950.4 | 47.368 | 76 | 38 | 2 | 9 | 83 | 2 | 76 | 1.32e-16 | 77.0 |
MsaG005314 | AT5G10140.4 | 50.725 | 69 | 33 | 1 | 9 | 76 | 2 | 70 | 1.35e-16 | 75.5 |
MsaG005314 | AT3G58780.4 | 50.704 | 71 | 35 | 0 | 6 | 76 | 14 | 84 | 1.40e-16 | 77.4 |
MsaG005314 | AT5G62165.6 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 1.61e-16 | 74.3 |
MsaG005314 | AT5G62165.9 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 1.61e-16 | 74.3 |
MsaG005314 | AT5G62165.7 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 1.61e-16 | 74.3 |
MsaG005314 | AT5G62165.8 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 1.61e-16 | 74.3 |
MsaG005314 | AT5G62165.13 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 1.61e-16 | 74.3 |
MsaG005314 | AT5G10140.1 | 50.725 | 69 | 33 | 1 | 9 | 76 | 2 | 70 | 1.69e-16 | 75.5 |
MsaG005314 | AT5G10140.3 | 50.725 | 69 | 33 | 1 | 9 | 76 | 2 | 70 | 1.76e-16 | 75.1 |
MsaG005314 | AT3G57230.1 | 47.059 | 68 | 36 | 0 | 9 | 76 | 2 | 69 | 1.76e-16 | 76.3 |
MsaG005314 | AT3G57230.4 | 47.059 | 68 | 36 | 0 | 9 | 76 | 2 | 69 | 1.76e-16 | 76.3 |
MsaG005314 | AT5G62165.17 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 1.86e-16 | 74.3 |
MsaG005314 | AT5G62165.12 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 1.86e-16 | 74.3 |
MsaG005314 | AT5G62165.11 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 1.86e-16 | 74.3 |
MsaG005314 | AT5G13790.2 | 43.011 | 93 | 44 | 1 | 9 | 101 | 2 | 85 | 2.15e-16 | 76.6 |
MsaG005314 | AT3G57390.1 | 50.000 | 68 | 34 | 0 | 9 | 76 | 2 | 69 | 2.23e-16 | 76.3 |
MsaG005314 | AT5G13790.1 | 51.471 | 68 | 33 | 0 | 9 | 76 | 2 | 69 | 2.98e-16 | 76.3 |
MsaG005314 | AT4G11880.2 | 48.611 | 72 | 36 | 1 | 10 | 80 | 3 | 74 | 3.98e-16 | 73.9 |
MsaG005314 | AT4G11880.3 | 48.611 | 72 | 36 | 1 | 10 | 80 | 3 | 74 | 3.98e-16 | 73.9 |
MsaG005314 | AT1G69120.2 | 40.659 | 91 | 51 | 1 | 9 | 99 | 2 | 89 | 4.13e-16 | 75.1 |
MsaG005314 | AT2G22630.1 | 47.059 | 68 | 36 | 0 | 9 | 76 | 2 | 69 | 4.13e-16 | 75.1 |
MsaG005314 | AT2G22630.2 | 47.059 | 68 | 36 | 0 | 9 | 76 | 2 | 69 | 4.13e-16 | 75.1 |
MsaG005314 | AT5G51860.2 | 52.239 | 67 | 32 | 0 | 10 | 76 | 3 | 69 | 5.61e-16 | 74.3 |
MsaG005314 | AT1G28450.1 | 29.371 | 143 | 95 | 3 | 5 | 141 | 4 | 146 | 5.70e-16 | 73.9 |
MsaG005314 | AT5G51860.1 | 52.239 | 67 | 32 | 0 | 10 | 76 | 3 | 69 | 6.72e-16 | 74.3 |
MsaG005314 | AT5G62165.10 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 7.11e-16 | 73.9 |
MsaG005314 | AT5G62165.4 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 7.11e-16 | 73.9 |
MsaG005314 | AT5G60910.1 | 49.296 | 71 | 33 | 1 | 9 | 79 | 2 | 69 | 7.14e-16 | 74.7 |
MsaG005314 | AT3G54340.1 | 29.487 | 156 | 86 | 3 | 9 | 162 | 2 | 135 | 7.36e-16 | 74.3 |
MsaG005314 | AT5G62165.3 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 7.70e-16 | 73.9 |
MsaG005314 | AT5G62165.1 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 7.70e-16 | 73.9 |
MsaG005314 | AT5G62165.2 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 7.70e-16 | 73.9 |
MsaG005314 | AT4G11880.4 | 48.611 | 72 | 36 | 1 | 10 | 80 | 3 | 74 | 9.66e-16 | 73.9 |
MsaG005314 | AT4G11880.1 | 48.611 | 72 | 36 | 1 | 10 | 80 | 3 | 74 | 9.66e-16 | 73.9 |
MsaG005314 | AT1G69120.1 | 40.659 | 91 | 51 | 1 | 9 | 99 | 2 | 89 | 9.89e-16 | 74.7 |
MsaG005314 | AT1G26310.1 | 47.826 | 69 | 35 | 1 | 9 | 76 | 2 | 70 | 1.06e-15 | 74.3 |
MsaG005314 | AT3G30260.1 | 46.377 | 69 | 36 | 1 | 9 | 76 | 2 | 70 | 1.35e-15 | 73.9 |
MsaG005314 | AT5G23260.1 | 44.330 | 97 | 46 | 3 | 2 | 90 | 9 | 105 | 2.04e-15 | 73.9 |
MsaG005314 | AT5G23260.4 | 44.330 | 97 | 46 | 3 | 2 | 90 | 9 | 105 | 2.17e-15 | 73.9 |
MsaG005314 | AT5G20240.2 | 47.143 | 70 | 35 | 1 | 9 | 76 | 2 | 71 | 2.81e-15 | 71.2 |
MsaG005314 | AT5G15800.1 | 49.275 | 69 | 34 | 1 | 9 | 76 | 2 | 70 | 2.91e-15 | 73.2 |
MsaG005314 | AT5G23260.3 | 45.455 | 88 | 42 | 2 | 9 | 90 | 2 | 89 | 3.64e-15 | 72.8 |
MsaG005314 | AT5G23260.2 | 45.455 | 88 | 42 | 2 | 9 | 90 | 2 | 89 | 4.11e-15 | 72.8 |
MsaG005314 | AT2G22540.2 | 50.000 | 68 | 29 | 1 | 9 | 76 | 2 | 64 | 4.22e-15 | 72.4 |
MsaG005314 | AT5G15800.2 | 49.275 | 69 | 34 | 1 | 9 | 76 | 2 | 70 | 4.91e-15 | 72.8 |
MsaG005314 | AT5G20240.1 | 47.143 | 70 | 35 | 1 | 9 | 76 | 2 | 71 | 5.32e-15 | 71.6 |
MsaG005314 | AT1G17310.1 | 51.899 | 79 | 36 | 1 | 8 | 86 | 47 | 123 | 6.76e-15 | 71.6 |
MsaG005314 | AT5G65050.1 | 30.412 | 194 | 111 | 7 | 9 | 193 | 2 | 180 | 7.00e-15 | 70.9 |
MsaG005314 | AT2G14210.1 | 46.377 | 69 | 36 | 1 | 9 | 76 | 2 | 70 | 8.17e-15 | 71.6 |
MsaG005314 | AT1G17310.2 | 51.899 | 79 | 36 | 1 | 8 | 86 | 58 | 134 | 8.53e-15 | 71.6 |
MsaG005314 | AT5G65050.5 | 27.979 | 193 | 120 | 8 | 9 | 193 | 2 | 183 | 9.10e-15 | 70.5 |
MsaG005314 | AT2G14210.2 | 46.377 | 69 | 36 | 1 | 9 | 76 | 2 | 70 | 1.11e-14 | 71.2 |
MsaG005314 | AT3G58780.2 | 53.333 | 60 | 28 | 0 | 6 | 65 | 14 | 73 | 1.90e-14 | 70.9 |
MsaG005314 | AT3G02310.2 | 47.826 | 69 | 35 | 1 | 9 | 76 | 2 | 70 | 2.03e-14 | 70.1 |
MsaG005314 | AT5G65050.2 | 46.377 | 69 | 36 | 1 | 9 | 76 | 2 | 70 | 2.28e-14 | 69.3 |
MsaG005314 | AT1G24260.2 | 28.226 | 248 | 142 | 9 | 9 | 234 | 2 | 235 | 2.32e-14 | 70.9 |
MsaG005314 | AT3G58780.3 | 53.333 | 60 | 28 | 0 | 6 | 65 | 14 | 73 | 2.50e-14 | 70.9 |
MsaG005314 | AT1G24260.3 | 29.114 | 237 | 140 | 8 | 9 | 234 | 2 | 221 | 3.15e-14 | 70.1 |
MsaG005314 | AT2G03710.3 | 53.571 | 56 | 26 | 0 | 9 | 64 | 2 | 57 | 3.94e-14 | 68.9 |
MsaG005314 | AT5G65050.3 | 46.377 | 69 | 36 | 1 | 9 | 76 | 2 | 70 | 4.27e-14 | 68.9 |
MsaG005314 | AT3G02310.1 | 47.826 | 69 | 35 | 1 | 9 | 76 | 2 | 70 | 4.99e-14 | 69.7 |
MsaG005314 | AT2G03710.2 | 47.143 | 70 | 35 | 2 | 9 | 76 | 2 | 71 | 7.83e-14 | 69.3 |
MsaG005314 | AT5G65060.3 | 46.377 | 69 | 36 | 1 | 9 | 76 | 2 | 70 | 8.21e-14 | 68.2 |
MsaG005314 | AT2G03710.1 | 47.143 | 70 | 35 | 2 | 9 | 76 | 2 | 71 | 8.41e-14 | 69.3 |
MsaG005314 | AT5G65060.2 | 46.377 | 69 | 36 | 1 | 9 | 76 | 2 | 70 | 8.59e-14 | 67.8 |
MsaG005314 | AT1G47760.1 | 31.788 | 151 | 82 | 5 | 9 | 156 | 2 | 134 | 8.96e-14 | 67.8 |
MsaG005314 | AT1G24260.1 | 53.571 | 56 | 26 | 0 | 9 | 64 | 2 | 57 | 1.00e-13 | 68.9 |
MsaG005314 | AT5G65060.1 | 46.377 | 69 | 36 | 1 | 9 | 76 | 2 | 70 | 1.09e-13 | 67.8 |
MsaG005314 | AT1G71692.1 | 44.286 | 70 | 38 | 1 | 9 | 77 | 2 | 71 | 1.33e-13 | 67.8 |
MsaG005314 | AT5G65070.4 | 42.029 | 69 | 39 | 1 | 9 | 76 | 2 | 70 | 3.65e-13 | 65.5 |
MsaG005314 | AT5G65070.1 | 42.029 | 69 | 39 | 1 | 9 | 76 | 2 | 70 | 6.14e-13 | 65.9 |
MsaG005314 | AT5G65070.5 | 42.029 | 69 | 39 | 1 | 9 | 76 | 2 | 70 | 1.15e-12 | 65.5 |
MsaG005314 | AT5G65070.2 | 42.029 | 69 | 39 | 1 | 9 | 76 | 2 | 70 | 1.27e-12 | 65.5 |
MsaG005314 | AT1G18750.4 | 25.806 | 186 | 119 | 6 | 9 | 177 | 2 | 185 | 4.53e-12 | 65.1 |
MsaG005314 | AT1G18750.1 | 25.806 | 186 | 119 | 6 | 9 | 177 | 2 | 185 | 5.33e-12 | 65.1 |
MsaG005314 | AT5G65070.3 | 47.368 | 57 | 30 | 0 | 9 | 65 | 2 | 58 | 5.86e-12 | 63.5 |
MsaG005314 | AT1G69540.1 | 32.727 | 110 | 66 | 3 | 9 | 117 | 2 | 104 | 1.76e-11 | 63.5 |
MsaG005314 | AT4G37435.1 | 40.278 | 72 | 42 | 1 | 9 | 79 | 2 | 73 | 1.90e-11 | 61.6 |
MsaG005314 | AT1G69540.2 | 32.727 | 110 | 66 | 3 | 9 | 117 | 2 | 104 | 1.98e-11 | 63.2 |
MsaG005314 | AT1G18750.3 | 37.333 | 75 | 45 | 1 | 9 | 81 | 2 | 76 | 3.98e-11 | 62.4 |
MsaG005314 | AT2G26320.1 | 40.000 | 70 | 40 | 1 | 9 | 76 | 18 | 87 | 4.27e-11 | 58.9 |
MsaG005314 | AT5G65080.3 | 42.029 | 69 | 39 | 1 | 9 | 76 | 9 | 77 | 5.82e-11 | 60.1 |
MsaG005314 | AT2G03060.3 | 39.286 | 84 | 48 | 3 | 9 | 90 | 2 | 84 | 6.97e-11 | 61.6 |
MsaG005314 | AT2G03060.7 | 39.286 | 84 | 48 | 3 | 9 | 90 | 2 | 84 | 6.97e-11 | 61.6 |
MsaG005314 | AT2G03060.1 | 39.286 | 84 | 48 | 3 | 9 | 90 | 2 | 84 | 6.97e-11 | 61.6 |
MsaG005314 | AT2G03060.2 | 39.286 | 84 | 48 | 3 | 9 | 90 | 2 | 84 | 7.04e-11 | 61.6 |
MsaG005314 | AT5G65080.2 | 43.548 | 62 | 35 | 0 | 1 | 62 | 1 | 62 | 8.38e-11 | 60.1 |
Find 52 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTTGAGTTTGCGGAGGATT+TGG | 0.289021 | 1:+80079702 | None:intergenic |
TGGTGGGCTGGTCCCGTTGA+TGG | 0.303436 | 1:-80079888 | MsaT005314.1:CDS |
GATCAACCAGCTACTGGATA+TGG | 0.309226 | 1:-80079967 | MsaT005314.1:CDS |
ATTGCATGGTACCATTGTTT+TGG | 0.337688 | 1:+80080045 | None:intergenic |
ATGTTGCAACCTCACTTGTT+TGG | 0.376512 | 1:-80079651 | MsaT005314.1:CDS |
AAGGAGACTAAGAAACTTGT+TGG | 0.377140 | 1:-80079825 | MsaT005314.1:CDS |
GGGCTCAGATCAAAAGAATC+TGG | 0.407516 | 1:+80079590 | None:intergenic |
CTTGTTTGGCTTCAACAATA+CGG | 0.429938 | 1:-80079637 | MsaT005314.1:CDS |
GTCCCGTTGATGGGATGAAT+AGG | 0.432754 | 1:-80079878 | MsaT005314.1:CDS |
GCGGAGGATTTGGTTGATGA+TGG | 0.439291 | 1:+80079712 | None:intergenic |
GGTGGGCTGGTCCCGTTGAT+GGG | 0.452333 | 1:-80079887 | MsaT005314.1:CDS |
TCCCGTTGATGGGATGAATA+GGG | 0.453040 | 1:-80079877 | MsaT005314.1:CDS |
TCTTCTCCATATCCAGTAGC+TGG | 0.455839 | 1:+80079961 | None:intergenic |
AGGCGACCGAGAGTCAGTTT+TGG | 0.458130 | 1:-80079908 | MsaT005314.1:CDS |
TTGTTTGGCTTCAACAATAC+GGG | 0.463078 | 1:-80079636 | MsaT005314.1:CDS |
TGCTGATAGACTTGTAATCC+AGG | 0.479655 | 1:-80079796 | MsaT005314.1:CDS |
GCCCTATTCATCCCATCAAC+GGG | 0.481029 | 1:+80079876 | None:intergenic |
AGTATTGAGCTCGCGCACAT+TGG | 0.504609 | 1:+80080001 | None:intergenic |
GTTGGAAACATTTGAGTTTG+CGG | 0.508183 | 1:+80079693 | None:intergenic |
GACTCAGATCAACCAGCTAC+TGG | 0.508380 | 1:-80079973 | MsaT005314.1:CDS |
GTCTATGACCGTATCAACAT+TGG | 0.509296 | 1:+80080091 | None:intergenic |
GCAGAGAGTGCAAAGCTCAC+TGG | 0.516982 | 1:+80080175 | None:intergenic |
GGCCCTATTCATCCCATCAA+CGG | 0.536262 | 1:+80079875 | None:intergenic |
AACAAGTGAGGTTGCAACAT+AGG | 0.539918 | 1:+80079654 | None:intergenic |
TCTATGACCGTATCAACATT+GGG | 0.542196 | 1:+80080092 | None:intergenic |
TGGCCAACCCAATGTTGATA+CGG | 0.545005 | 1:-80080099 | MsaT005314.1:CDS |
GCTCGCGCACATTGGCGCTA+CGG | 0.552531 | 1:+80080009 | None:intergenic |
CTTTCTCGAAGCGCCGTAGT+GGG | 0.553366 | 1:-80080211 | MsaT005314.1:CDS |
CTTCAACCATGTCGAGTGGA+AGG | 0.555433 | 1:-80080298 | None:intergenic |
GTGGGACTCGAGAGAGATAA+CGG | 0.555728 | 1:+80080069 | None:intergenic |
AGCCCACCAAAACTGACTCT+CGG | 0.565176 | 1:+80079902 | None:intergenic |
ACTTTCTCGAAGCGCCGTAG+TGG | 0.571963 | 1:-80080212 | MsaT005314.1:CDS |
AATGAAAATACCTTCTCCCC+AGG | 0.587583 | 1:+80080122 | None:intergenic |
AGAGCTGAGCAACTTGCGCA+AGG | 0.589828 | 1:-80079928 | MsaT005314.1:CDS |
TGACCGTATCAACATTGGGT+TGG | 0.600758 | 1:+80080096 | None:intergenic |
AGGTTTGAGTAGGAGCACCC+TGG | 0.605264 | 1:+80079778 | None:intergenic |
CTTTCTTGAAGAGCCCACTA+CGG | 0.610979 | 1:+80080198 | None:intergenic |
GGATTTGGTTGATGATGGAG+AGG | 0.611456 | 1:+80079717 | None:intergenic |
TGTTTGGCTTCAACAATACG+GGG | 0.616084 | 1:-80079635 | MsaT005314.1:CDS |
AGTGAGCTTTGCACTCTCTG+CGG | 0.622154 | 1:-80080173 | MsaT005314.1:CDS |
TGAGCTTCAACCATGTCGAG+TGG | 0.629588 | 1:-80080302 | None:intergenic |
CTCAGATCAAAAGAATCTGG+AGG | 0.633945 | 1:+80079593 | None:intergenic |
TGGTACCATGCAATTCATTG+AGG | 0.638950 | 1:-80080036 | MsaT005314.1:CDS |
CGAGTCCCACCCCAAAACAA+TGG | 0.639467 | 1:-80080056 | MsaT005314.1:CDS |
GTGAGCCTCAATGAATTGCA+TGG | 0.640763 | 1:+80080031 | None:intergenic |
GCTGATAGACTTGTAATCCA+GGG | 0.644111 | 1:-80079795 | MsaT005314.1:CDS |
GGAAACATTTGAGTTTGCGG+AGG | 0.647148 | 1:+80079696 | None:intergenic |
TTGTTGAAGCCAAACAAGTG+AGG | 0.651690 | 1:+80079642 | None:intergenic |
TCAGATCAAAAGAATCTGGA+GGG | 0.666536 | 1:+80079594 | None:intergenic |
TTTGGCTTCAACAATACGGG+GGG | 0.687957 | 1:-80079633 | MsaT005314.1:CDS |
TCGAGTGGAAGGAAAAGCCG+AGG | 0.691796 | 1:-80080287 | MsaT005314.1:CDS |
GTTTGGCTTCAACAATACGG+GGG | 0.701007 | 1:-80079634 | MsaT005314.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 80079599 | 80080312 | 80079599 | ID=MsaG005314 |
Chr1 | mRNA | 80079599 | 80080312 | 80079599 | ID=MsaT005314.1;Parent=MsaG005314 |
Chr1 | exon | 80079599 | 80080312 | 80079599 | ID=MsaT005314.1.exon1;Parent=MsaT005314.1 |
Chr1 | CDS | 80079599 | 80080312 | 80079599 | ID=cds.MsaT005314.1;Parent=MsaT005314.1 |
Gene Sequence |
Protein sequence |