AlfalfaGEDB | MsaG005373

M. sativa ssp. caerulea / MsaG005373

KEGG: -
GO: GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
PFAM: PF03101.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG005373	XP_039685931.1	91.159	837	25	3	17	804	3	839	0.0	1584

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG005373	sp\|Q9SWG3\|FAR1_ARATH	67.364	717	230	3	64	777	39	754	0.0	1007

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG005373	tr\|A0A396K329\|A0A396K329_MEDTR	91.122	811	23	3	43	804	1	811	0.0	1531

TFs/TRs:

Gene ID	Type	Classification
MsaG005373	TF	FAR1

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000281	MsaG005373	0.845006	9.958960e-59	4.564962e-56
MsaG000326	MsaG005373	0.836769	1.410327e-56	4.981939e-54
MsaG000382	MsaG005373	0.848935	8.462422e-60	4.422946e-57
MsaG000405	MsaG005373	0.814062	3.220146e-51	6.079581e-49
MsaG000431	MsaG005373	0.807977	6.605687e-50	1.074406e-47
MsaG000456	MsaG005373	0.825935	6.353847e-54	1.640265e-51
MsaG000683	MsaG005373	0.827109	3.345834e-54	8.923770e-52
MsaG000855	MsaG005373	0.842838	3.771795e-58	1.611142e-55
MsaG001084	MsaG005373	0.856175	7.452080e-62	5.024414e-59
MsaG001086	MsaG005373	0.811712	1.047567e-50	1.865396e-48
MsaG001237	MsaG005373	0.861830	1.538991e-63	1.283075e-60
MsaG001279	MsaG005373	0.802442	9.407656e-49	1.344385e-46
MsaG001531	MsaG005373	0.807975	6.612349e-50	1.075431e-47
MsaG001672	MsaG005373	0.873460	2.976826e-67	4.000991e-64
MsaG001859	MsaG005373	0.827015	3.521947e-54	9.368708e-52
MsaG002001	MsaG005373	0.821015	8.873339e-53	2.004808e-50
MsaG002002	MsaG005373	0.836269	1.888619e-56	6.571899e-54
MsaG002013	MsaG005373	0.872988	4.277764e-67	5.632471e-64
MsaG002866	MsaG005373	0.865200	1.402120e-64	1.335433e-61
MsaG003210	MsaG005373	0.858708	1.338956e-62	9.912972e-60
MsaG003187	MsaG005373	0.809830	2.663410e-50	4.529764e-48
MsaG003200	MsaG005373	0.810050	2.389049e-50	4.084764e-48
MsaG003201	MsaG005373	0.801177	1.705346e-48	2.367810e-46
MsaG003202	MsaG005373	0.813406	4.482134e-51	8.324412e-49
MsaG003203	MsaG005373	0.820158	1.393042e-52	3.076783e-50
MsaG003315	MsaG005373	0.807546	8.147431e-50	1.311501e-47
MsaG003389	MsaG005373	0.821547	6.699177e-53	1.534944e-50
MsaG003394	MsaG005373	0.816867	7.702244e-52	1.561365e-49
MsaG003468	MsaG005373	0.810404	2.005743e-50	3.459245e-48
MsaG003683	MsaG005373	0.803717	5.139963e-49	7.564187e-47
MsaG003918	MsaG005373	0.803945	4.612061e-49	6.823138e-47
MsaG004105	MsaG005373	0.807621	7.857177e-50	1.267028e-47
MsaG004150	MsaG005373	0.816406	9.758265e-52	1.954876e-49
MsaG004204	MsaG005373	0.846352	4.314424e-59	2.067458e-56
MsaG004301	MsaG005373	0.818708	2.971218e-52	6.316336e-50
MsaG005000	MsaG005373	0.846970	2.930575e-59	1.433613e-56
MsaG005018	MsaG005373	0.805137	2.608949e-49	3.967949e-47
MsaG005373	MsaG005401	0.819273	2.214005e-52	4.777027e-50
MsaG005373	MsaG005435	0.823060	2.995570e-53	7.148311e-51
MsaG005373	MsaG005438	0.827504	2.693204e-54	7.263023e-52
MsaG005373	MsaG005442	0.857865	2.379585e-62	1.707341e-59
MsaG005373	MsaG005443	0.868129	1.659082e-65	1.779147e-62
MsaG005373	MsaG005444	0.864357	2.568983e-64	2.365639e-61
MsaG005373	MsaG005506	0.862342	1.073983e-63	9.134028e-61
MsaG005373	MsaG005508	0.846506	3.919023e-59	1.887537e-56
MsaG005373	MsaG005582	0.826208	5.473968e-54	1.423815e-51
MsaG005373	MsaG005838	0.811520	1.152605e-50	2.042784e-48
MsaG005373	MsaG005864	0.890081	2.990952e-73	8.851896e-70
MsaG005373	MsaG006175	0.834352	5.728424e-56	1.882052e-53
MsaG005373	MsaG006331	0.809275	3.499151e-50	5.871666e-48
MsaG005373	MsaG006518	0.808127	6.138901e-50	1.002088e-47
MsaG005373	MsaG006902	0.858472	1.573433e-62	1.154779e-59
MsaG005373	MsaG006936	0.809190	3.648830e-50	6.110353e-48
MsaG005373	MsaG007353	0.827192	3.195778e-54	8.543409e-52
MsaG005373	MsaG007387	0.816229	1.068285e-51	2.130551e-49
MsaG005373	MsaG007400	0.802312	1.000279e-48	1.425197e-46
MsaG005373	MsaG007846	0.836976	1.250004e-56	4.443066e-54
MsaG005373	MsaG007729	0.835012	3.916457e-56	1.312366e-53
MsaG005373	MsaG007833	0.841700	7.525327e-58	3.099491e-55
MsaG005373	MsaG008218	0.800594	2.241127e-48	3.071081e-46
MsaG005373	MsaG008324	0.818089	4.099020e-52	8.575105e-50
MsaG005373	MsaG008461	0.806362	1.446719e-49	2.264475e-47
MsaG005373	MsaG008534	0.807503	8.321109e-50	1.338089e-47
MsaG005373	MsaG008535	0.813371	4.562613e-51	8.466184e-49
MsaG005373	MsaG008536	0.816150	1.112365e-51	2.213996e-49
MsaG005373	MsaG008552	0.903305	9.295612e-79	5.784849e-75
MsaG005373	MsaG008565	0.831823	2.422605e-55	7.390484e-53
MsaG005373	MsaG008569	0.818783	2.858300e-52	6.088173e-50
MsaG005373	MsaG009138	0.832531	1.621715e-55	5.049704e-53
MsaG005373	MsaG009390	0.825243	9.252668e-54	2.343093e-51
MsaG005373	MsaG009501	0.844402	1.446815e-58	6.500165e-56
MsaG005373	MsaG009578	0.839268	3.233662e-57	1.233679e-54
MsaG005373	MsaG010031	0.816739	8.223973e-52	1.661688e-49
MsaG005373	MsaG010053	0.823785	2.031061e-53	4.942992e-51
MsaG005373	MsaG010066	0.808281	5.696013e-50	9.332374e-48
MsaG005373	MsaG010508	0.829464	9.105042e-55	2.594891e-52
MsaG005373	MsaG010835	0.804314	3.867890e-49	5.771416e-47
MsaG005373	MsaG010894	0.832969	1.264449e-55	3.987838e-53
MsaG005373	MsaG010906	0.806320	1.476392e-49	2.308668e-47
MsaG005373	MsaG010899	0.803013	7.178688e-49	1.039393e-46
MsaG005373	MsaG011314	0.802503	9.139226e-49	1.307858e-46
MsaG005373	MsaG011275	0.826833	3.892064e-54	1.030084e-51
MsaG005373	MsaG011490	0.805937	1.775388e-49	2.751105e-47
MsaG005373	MsaG011806	0.881868	3.567212e-70	7.027692e-67
MsaG005373	MsaG012304	0.830400	5.396740e-55	1.579875e-52
MsaG005373	MsaG012380	0.838213	6.041867e-57	2.230520e-54
MsaG005373	MsaG012382	0.868649	1.129409e-65	1.237338e-62
MsaG005373	MsaG012422	0.839710	2.486024e-57	9.616697e-55
MsaG005373	MsaG012943	0.809177	3.671706e-50	6.146846e-48
MsaG005373	MsaG012944	0.819533	1.932446e-52	4.197877e-50
MsaG005373	MsaG012894	0.803603	5.425741e-49	7.963476e-47
MsaG005373	MsaG013325	0.837090	1.169378e-56	4.170973e-54
MsaG005373	MsaG013621	0.830988	3.880103e-55	1.155150e-52
MsaG005373	MsaG013644	0.818601	3.141028e-52	6.658848e-50
MsaG005373	MsaG013657	0.821586	6.562926e-53	1.505256e-50
MsaG005373	MsaG013909	0.813387	4.525007e-51	8.400077e-49
MsaG005373	MsaG013962	0.836540	1.613059e-56	5.658665e-54
MsaG005373	MsaG013993	0.850721	2.695499e-60	1.497648e-57
MsaG005373	MsaG014110	0.826576	4.478753e-54	1.176937e-51
MsaG005373	MsaG014184	0.885337	1.911783e-71	4.452109e-68
MsaG005373	MsaG014439	0.820156	1.394653e-52	3.080118e-50
MsaG005373	MsaG014810	0.862051	1.317434e-63	1.107895e-60
MsaG005373	MsaG014953	0.830017	6.687626e-55	1.936430e-52
MsaG005373	MsaG014926	0.821618	6.452646e-53	1.481260e-50
MsaG005373	MsaG014927	0.807783	7.260124e-50	1.175362e-47
MsaG005373	MsaG015176	0.826889	3.774816e-54	1.000626e-51
MsaG005373	MsaG015216	0.837075	1.179658e-56	4.205811e-54
MsaG005373	MsaG015188	0.832965	1.266946e-55	3.995318e-53
MsaG005373	MsaG015202	0.840314	1.731998e-57	6.828600e-55
MsaG005373	MsaG015269	0.812536	6.939239e-51	1.261109e-48
MsaG005373	MsaG015311	0.825432	8.349161e-54	2.125337e-51
MsaG005373	MsaG016006	0.808338	5.538379e-50	9.086425e-48
MsaG005373	MsaG016149	0.817335	6.050481e-52	1.241455e-49
MsaG005373	MsaG016348	0.804515	3.514002e-49	5.267770e-47
MsaG005373	MsaG016568	0.815989	1.208464e-51	2.395295e-49
MsaG005373	MsaG016685	0.826135	5.697752e-54	1.479062e-51
MsaG005373	MsaG016708	0.852497	8.518486e-61	5.034947e-58
MsaG005373	MsaG017013	0.850831	2.511012e-60	1.400530e-57
MsaG005373	MsaG017058	0.810329	2.081762e-50	3.583750e-48
MsaG005373	MsaG017209	0.835053	3.824400e-56	1.283079e-53
MsaG005373	MsaG017337	0.815365	1.661432e-51	3.241537e-49
MsaG005373	MsaG017718	0.839033	3.717267e-57	1.407942e-54
MsaG005373	MsaG017820	0.844195	1.643031e-58	7.332198e-56
MsaG005373	MsaG018123	0.805066	2.699514e-49	4.098913e-47
MsaG005373	MsaG018380	0.827539	2.641776e-54	7.131510e-52
MsaG005373	MsaG018372	0.806241	1.533725e-49	2.393853e-47
MsaG005373	MsaG019235	0.837285	1.042699e-56	3.741241e-54
MsaG005373	MsaG019361	0.810218	2.198485e-50	3.774338e-48
MsaG005373	MsaG019731	0.816352	1.003452e-51	2.007473e-49
MsaG005373	MsaG020029	0.851137	2.060618e-60	1.161488e-57
MsaG005373	MsaG020290	0.819462	2.006075e-52	4.349845e-50
MsaG005373	MsaG020580	0.810933	1.543344e-50	2.696236e-48
MsaG005373	MsaG020843	0.802579	8.816782e-49	1.263918e-46
MsaG005373	MsaG020874	0.850073	4.091007e-60	2.222558e-57
MsaG005373	MsaG020875	0.853111	5.697671e-61	3.441636e-58
MsaG005373	MsaG020983	0.842742	3.999115e-58	1.703067e-55
MsaG005373	MsaG020984	0.817094	6.852517e-52	1.397322e-49
MsaG005373	MsaG021286	0.853470	4.501397e-61	2.753683e-58
MsaG005373	MsaG021448	0.807140	9.925536e-50	1.582326e-47
MsaG005373	MsaG022100	0.800888	1.952582e-48	2.693444e-46
MsaG005373	MsaG022370	0.851890	1.264865e-60	7.319318e-58
MsaG005373	MsaG022387	0.801260	1.640535e-48	2.282064e-46
MsaG005373	MsaG022628	0.844025	1.823661e-58	8.092413e-56
MsaG005373	MsaG023271	0.838120	6.380056e-57	2.348649e-54
MsaG005373	MsaG023578	0.822768	3.501215e-53	8.289420e-51
MsaG005373	MsaG023595	0.804400	3.712279e-49	5.550280e-47
MsaG005373	MsaG023761	0.819859	1.629158e-52	3.569608e-50
MsaG005373	MsaG023762	0.820493	1.168069e-52	2.602769e-50
MsaG005373	MsaG023884	0.852405	9.041241e-61	5.327540e-58
MsaG005373	MsaG024228	0.819842	1.644209e-52	3.600979e-50
MsaG005373	MsaG025148	0.862135	1.242454e-63	1.048171e-60
MsaG005373	MsaG025287	0.803866	4.787856e-49	7.070272e-47
MsaG005373	MsaG025574	0.823261	2.690584e-53	6.455522e-51
MsaG005373	MsaG025575	0.848072	1.463840e-59	7.431412e-57
MsaG005373	MsaG025691	0.839779	2.384857e-57	9.245631e-55
MsaG005373	MsaG026261	0.814742	2.281100e-51	4.380935e-49
MsaG005373	MsaG026721	0.825487	8.104707e-54	2.066279e-51
MsaG005373	MsaG026714	0.880918	7.821370e-70	1.473740e-66
MsaG005373	MsaG026859	0.801370	1.558129e-48	2.172886e-46
MsaG005373	MsaG026863	0.831317	3.223382e-55	9.687946e-53
MsaG005373	MsaG026970	0.809558	3.044913e-50	5.144760e-48
MsaG005373	MsaG027039	0.828402	1.641142e-54	4.538999e-52
MsaG005373	MsaG027780	0.805119	2.631265e-49	4.000198e-47
MsaG005373	MsaG028034	0.806549	1.321416e-49	2.077537e-47
MsaG005373	MsaG028257	0.800639	2.193888e-48	3.009502e-46
MsaG005373	MsaG028374	0.838047	6.663281e-57	2.447290e-54
MsaG005373	MsaG028351	0.800890	1.950697e-48	2.690945e-46
MsaG005373	MsaG028442	0.805470	2.222977e-49	3.407104e-47
MsaG005373	MsaG028457	0.834987	3.972532e-56	1.330146e-53
MsaG005373	MsaG028485	0.871435	1.399934e-66	1.724105e-63
MsaG005373	MsaG028489	0.800540	2.297746e-48	3.144832e-46
MsaG005373	MsaG028500	0.859171	9.745357e-63	7.341748e-60
MsaG005373	MsaG028501	0.865201	1.401840e-64	1.335197e-61
MsaG005373	MsaG028503	0.854981	1.655271e-61	1.068603e-58
MsaG005373	MsaG028716	0.872835	4.812595e-67	6.294825e-64
MsaG005373	MsaG028758	0.806536	1.329693e-49	2.089915e-47
MsaG005373	MsaG028843	0.807160	9.827531e-50	1.567481e-47
MsaG005373	MsaG029319	0.832001	2.190853e-55	6.717985e-53
MsaG005373	MsaG029320	0.885714	1.383859e-71	3.282155e-68
MsaG005373	MsaG029461	0.810459	1.951693e-50	3.370552e-48
MsaG005373	MsaG029745	0.818719	2.954080e-52	6.281742e-50
MsaG005373	MsaG029863	0.812172	8.325735e-51	1.499402e-48
MsaG005373	MsaG029907	0.811815	9.952990e-51	1.776835e-48
MsaG005373	MsaG029899	0.801202	1.685501e-48	2.341544e-46
MsaG005373	MsaG029948	0.813701	3.863971e-51	7.229287e-49
MsaG005373	MsaG029929	0.806042	1.688330e-49	2.622628e-47
MsaG005373	MsaG030083	0.810408	2.001605e-50	3.452477e-48
MsaG005373	MsaG030084	0.847112	2.680139e-59	1.317317e-56
MsaG005373	MsaG030313	0.819942	1.560251e-52	3.426279e-50
MsaG005373	MsaG030332	0.857358	3.357284e-62	2.363782e-59
MsaG005373	MsaG030336	0.807935	6.741490e-50	1.095409e-47
MsaG005373	MsaG030400	0.808670	4.707990e-50	7.786507e-48
MsaG005373	MsaG030401	0.802474	9.262953e-49	1.324690e-46
MsaG005373	MsaG030501	0.816912	7.523603e-52	1.526974e-49
MsaG005373	MsaG030507	0.841172	1.034522e-57	4.190478e-55
MsaG005373	MsaG030801	0.803868	4.783046e-49	7.063543e-47
MsaG005373	MsaG031277	0.833413	9.811489e-56	3.135198e-53
MsaG005373	MsaG031288	0.860882	2.984073e-63	2.399319e-60
MsaG005373	MsaG031735	0.808720	4.593921e-50	7.607112e-48
MsaG005373	MsaG032062	0.838343	5.594703e-57	2.073720e-54
MsaG005373	MsaG032068	0.814890	2.115984e-51	4.079037e-49
MsaG005373	MsaG032147	0.820921	9.326389e-53	2.101853e-50
MsaG005373	MsaG032148	0.811312	1.278369e-50	2.254214e-48
MsaG005373	MsaG033022	0.857597	2.853829e-62	2.027139e-59
MsaG005373	MsaG033249	0.838257	5.884558e-57	2.175412e-54
MsaG005373	MsaG033812	0.803459	5.810300e-49	8.499547e-47
MsaG005373	MsaG033831	0.826413	4.896364e-54	1.280859e-51
MsaG005373	MsaG034148	0.800317	2.550644e-48	3.473299e-46
MsaG005373	MsaG034259	0.800538	2.299894e-48	3.147660e-46
MsaG005373	MsaG034827	0.877320	1.442703e-68	2.301747e-65
MsaG005373	MsaG034828	0.878918	3.999408e-69	6.867476e-66
MsaG005373	MsaG034829	0.885090	2.362292e-71	5.434671e-68
MsaG005373	MsaG034842	0.885312	1.953238e-71	4.543413e-68
MsaG005373	MsaG034975	0.805306	2.405258e-49	3.672495e-47
MsaG005373	MsaG036332	0.858485	1.559220e-62	1.144949e-59
MsaG005373	MsaG036377	0.836354	1.797453e-56	6.270597e-54
MsaG005373	MsaG037861	0.828909	1.239527e-54	3.477150e-52
MsaG005373	MsaG038016	0.808134	6.119419e-50	9.990619e-48
MsaG005373	MsaG038263	0.800238	2.646007e-48	3.596762e-46
MsaG005373	MsaG039206	0.805510	2.180561e-49	3.345213e-47
MsaG005373	MsaG039621	0.846030	5.274903e-59	2.500743e-56
MsaG005373	MsaG040649	0.834356	5.714828e-56	1.877834e-53
MsaG005373	MsaG040669	0.821535	6.741338e-53	1.544145e-50
MsaG005373	MsaG040800	0.836625	1.534834e-56	5.397826e-54
MsaG005373	MsaG040980	0.811219	1.338701e-50	2.355220e-48
MsaG005373	MsaG040982	0.825000	1.055475e-53	2.655003e-51
MsaG005373	MsaG040985	0.800695	2.137684e-48	2.936060e-46
MsaG005373	MsaG041071	0.815372	1.655462e-51	3.230482e-49
MsaG005373	MsaG041300	0.810835	1.620335e-50	2.824013e-48
MsaG005373	MsaG041517	0.820654	1.073543e-52	2.402225e-50
MsaG005373	MsaG041685	0.826307	5.187852e-54	1.353091e-51
MsaG005373	MsaG041684	0.817704	5.002825e-52	1.036217e-49
MsaG005373	MsaG041686	0.819996	1.516812e-52	3.335722e-50
MsaG005373	MsaG041737	0.801978	1.170696e-48	1.655306e-46
MsaG005373	MsaG041899	0.847004	2.868179e-59	1.404704e-56
MsaG005373	MsaG041900	0.864997	1.623121e-64	1.533261e-61
MsaG005373	MsaG041901	0.863424	4.997204e-64	4.434902e-61
MsaG005373	MsaG041902	0.866303	6.315196e-65	6.285826e-62
MsaG005373	MsaG041903	0.851051	2.179168e-60	1.224659e-57
MsaG005373	MsaG041904	0.852061	1.131614e-60	6.587958e-58
MsaG005373	MsaG042382	0.842948	3.526537e-58	1.511744e-55
MsaG005373	MsaG042968	0.800979	1.871758e-48	2.587217e-46
MsaG005373	MsaG043177	0.805882	1.823493e-49	2.821985e-47
MsaG005373	MsaG043227	0.808263	5.745524e-50	9.409491e-48
MsaG005373	MsaG043415	0.801270	1.633132e-48	2.272234e-46
MsaG005373	MsaG043659	0.824683	1.252238e-53	3.122790e-51
MsaG005373	MsaG043663	0.809416	3.265561e-50	5.498606e-48
MsaG005373	MsaG044336	0.868021	1.795824e-65	1.917284e-62
MsaG005373	MsaG044384	0.863847	3.697026e-64	3.336000e-61
MsaG005373	MsaG044387	0.810756	1.684989e-50	2.931005e-48
MsaG005373	MsaG044439	0.853070	5.851257e-61	3.529301e-58
MsaG005373	MsaG044547	0.831143	3.556573e-55	1.063565e-52
MsaG005373	MsaG044885	0.803942	4.617200e-49	6.830417e-47
MsaG005373	MsaG044919	0.882271	2.551409e-70	5.121511e-67
MsaG005373	MsaG045376	0.823231	2.733460e-53	6.553052e-51
MsaG005373	MsaG045403	0.877652	1.106386e-68	1.792163e-65
MsaG005373	MsaG045404	0.810237	2.177993e-50	3.740974e-48
MsaG005373	MsaG045445	0.818687	3.005129e-52	6.384778e-50
MsaG005373	MsaG045446	0.801828	1.256507e-48	1.770597e-46
MsaG005373	MsaG045611	0.817862	4.610003e-52	9.587862e-50
MsaG005373	MsaG045973	0.811883	9.616886e-51	1.719745e-48
MsaG005373	MsaG046040	0.822916	3.235178e-53	7.690021e-51
MsaG005373	MsaG046053	0.882466	2.169213e-70	4.395503e-67
MsaG005373	MsaG046226	0.810458	1.952409e-50	3.371725e-48
MsaG005373	MsaG046383	0.821026	8.821981e-53	1.993774e-50
MsaG005373	MsaG046588	0.823723	2.100569e-53	5.103479e-51
MsaG005373	MsaG046862	0.850345	3.433840e-60	1.883135e-57
MsaG005373	MsaG047054	0.848923	8.527134e-60	4.454996e-57
MsaG005373	MsaG002437	0.843980	1.875463e-58	8.309593e-56
MsaG005373	MsaG000067	0.804855	2.985438e-49	4.511007e-47
MsaG005373	MsaG002583	0.830434	5.294222e-55	1.551334e-52
MsaG005373	MsaG007590	0.809890	2.585131e-50	4.403016e-48
MsaG005373	MsaG007674	0.813830	3.619375e-51	6.794132e-49
MsaG005373	MsaG008796	0.800538	2.299825e-48	3.147571e-46
MsaG005373	MsaG009037	0.875911	4.405774e-68	6.598338e-65
MsaG005373	MsaG013401	0.833860	7.596832e-56	2.459409e-53
MsaG005373	MsaG011672	0.806111	1.633118e-49	2.541041e-47
MsaG005373	MsaG013066	0.859001	1.095288e-62	8.198655e-60
MsaG005373	MsaG014180	0.846348	4.324968e-59	2.072282e-56
MsaG005373	MsaG015534	0.849674	5.283786e-60	2.832225e-57
MsaG005373	MsaG014275	0.872368	6.880721e-67	8.820640e-64
MsaG005373	MsaG013014	0.800068	2.864185e-48	3.878549e-46
MsaG005373	MsaG018815	0.847406	2.228233e-59	1.106129e-56
MsaG005373	MsaG032410	0.879085	3.494363e-69	6.046293e-66
MsaG005373	MsaG032980	0.811717	1.044960e-50	1.860990e-48
MsaG005373	MsaG032845	0.865606	1.046746e-64	1.013039e-61
MsaG005373	MsaG031316	0.806330	1.468938e-49	2.297566e-47
MsaG005373	MsaG033234	0.814939	2.063420e-51	3.982675e-49
MsaG005373	MsaG030874	0.817006	7.169318e-52	1.458611e-49
MsaG005373	MsaG033325	0.872795	4.963818e-67	6.480828e-64
MsaG005373	MsaG034264	0.808265	5.738710e-50	9.398924e-48
MsaG005373	MsaG037271	0.837166	1.118540e-56	3.998909e-54
MsaG005373	MsaG038765	0.818202	3.864544e-52	8.108505e-50
MsaG005373	MsaG037384	0.800569	2.267179e-48	3.105068e-46
MsaG005373	MsaG037729	0.813768	3.735682e-51	7.001241e-49
MsaG005373	MsaG037786	0.807745	7.396251e-50	1.196278e-47
MsaG005373	MsaG037480	0.804743	3.150610e-49	4.748113e-47
MsaG005373	MsaG039226	0.821331	7.510452e-53	1.711025e-50
MsaG005373	MsaG039736	0.847686	1.867625e-59	9.358672e-57
MsaG005373	MsaG035272	0.822468	4.107466e-53	9.646045e-51
MsaG005373	MsaG036984	0.852717	7.372803e-61	4.392109e-58
MsaG005373	MsaG039603	0.802098	1.106306e-48	1.568503e-46
MsaG005373	MsaG045876	0.804419	3.678162e-49	5.501704e-47
MsaG005373	MsaG043312	0.805004	2.779749e-49	4.214754e-47
MsaG005373	MsaG043458	0.845796	6.101482e-59	2.870275e-56

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG005373	MtrunA17_Chr1g0207551	91.122	811	23	3	43	804	1	811	0.0	1531
MsaG005373	MtrunA17_Chr3g0080351	49.934	759	339	5	32	772	32	767	0.0	731
MsaG005373	MtrunA17_Chr2g0329031	49.424	694	326	8	70	753	8	686	0.0	677
MsaG005373	MtrunA17_Chr5g0448761	36.505	641	390	8	64	688	48	687	1.73e-144	444
MsaG005373	MtrunA17_Chr1g0202341	34.281	633	401	6	74	694	49	678	5.83e-125	390
MsaG005373	MtrunA17_Chr2g0291581	34.450	627	385	10	69	682	63	676	5.12e-122	382
MsaG005373	MtrunA17_Chr5g0441581	34.548	631	386	7	74	695	30	642	5.72e-120	377
MsaG005373	MtrunA17_Chr2g0296781	35.273	567	353	6	80	637	1	562	4.22e-116	368
MsaG005373	MtrunA17_Chr5g0440451	32.669	652	387	15	75	692	42	675	3.54e-112	363
MsaG005373	MtrunA17_Chr6g0477261	39.720	428	250	3	217	637	25	451	3.71e-106	340
MsaG005373	MtrunA17_Chr1g0196541	30.986	710	427	13	80	744	1	692	1.40e-105	340
MsaG005373	MtrunA17_Chr3g0118611	37.194	449	276	3	247	691	118	564	2.49e-101	330
MsaG005373	MtrunA17_Chr2g0291591	34.195	503	325	4	75	575	63	561	2.17e-98	317
MsaG005373	MtrunA17_Chr2g0287061	34.744	567	327	9	68	631	175	701	1.19e-95	316
MsaG005373	MtrunA17_Chr5g0448511	34.009	444	287	2	246	683	11	454	1.63e-95	308
MsaG005373	MtrunA17_Chr3g0082121	31.331	616	394	13	69	671	36	635	1.76e-92	305
MsaG005373	MtrunA17_Chr8g0363841	31.127	559	368	7	84	631	25	577	8.52e-91	300
MsaG005373	MtrunA17_Chr1g0203721	28.031	635	443	6	79	700	66	699	4.09e-83	284
MsaG005373	MtrunA17_Chr2g0324011	27.768	569	400	6	71	632	5	569	5.76e-83	276
MsaG005373	MtrunA17_Chr6g0458391	29.401	568	378	5	69	632	218	766	1.48e-81	277
MsaG005373	MtrunA17_Chr2g0287651	29.893	562	376	9	80	631	79	632	2.81e-81	278
MsaG005373	MtrunA17_Chr2g0276841	29.887	619	396	15	76	674	70	670	5.77e-74	255
MsaG005373	MtrunA17_Chr1g0203051	28.924	567	365	16	71	618	74	621	5.10e-69	240
MsaG005373	MtrunA17_Chr1g0198761	29.340	576	373	14	79	632	50	613	5.56e-68	239
MsaG005373	MtrunA17_Chr2g0294841	27.018	607	421	11	35	626	4	603	2.83e-60	218
MsaG005373	MtrunA17_Chr2g0290391	26.332	657	424	19	76	698	51	681	6.64e-59	213
MsaG005373	MtrunA17_Chr1g0164591	29.870	308	206	4	160	466	10	308	1.17e-47	172
MsaG005373	MtrunA17_Chr5g0431001	29.882	425	275	10	76	482	61	480	1.12e-46	174
MsaG005373	MtrunA17_Chr7g0258861	27.431	288	200	5	71	351	5	290	1.34e-32	128
MsaG005373	MtrunA17_Chr2g0308841	26.800	250	155	4	407	641	1	237	3.83e-20	91.3
MsaG005373	MtrunA17_Chr7g0233911	38.053	113	66	2	75	184	33	144	1.73e-16	79.3
MsaG005373	MtrunA17_Chr3g0078041	37.383	107	60	2	75	176	49	153	3.09e-16	79.0
MsaG005373	MtrunA17_Chr4g0033611	29.630	135	91	2	45	178	48	179	2.74e-14	73.9
MsaG005373	MtrunA17_Chr2g0329361	31.250	112	72	2	70	176	54	165	7.26e-12	66.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG005373	AT4G15090.1	67.364	717	230	3	64	777	39	754	0.0	1007
MsaG005373	AT4G15090.5	67.364	717	230	3	64	777	39	754	0.0	1007
MsaG005373	AT4G15090.3	67.364	717	230	3	64	777	39	754	0.0	1007
MsaG005373	AT4G15090.2	67.364	717	230	3	64	777	39	754	0.0	1007
MsaG005373	AT4G15090.4	67.364	717	230	3	64	777	39	754	0.0	1007
MsaG005373	AT3G22170.2	49.793	725	323	5	65	772	60	760	0.0	729
MsaG005373	AT3G22170.1	49.793	725	323	5	65	772	60	760	0.0	729
MsaG005373	AT1G76320.1	46.479	639	330	4	80	714	1	631	0.0	622
MsaG005373	AT1G76320.4	46.479	639	330	4	80	714	1	631	0.0	622
MsaG005373	AT1G76320.2	46.479	639	330	4	80	714	1	631	0.0	622
MsaG005373	AT1G76320.3	46.479	639	330	4	80	714	1	631	0.0	622
MsaG005373	AT4G19990.3	44.054	740	340	9	73	775	18	720	0.0	544
MsaG005373	AT4G19990.4	44.054	740	340	9	73	775	18	720	0.0	544
MsaG005373	AT4G19990.6	44.054	740	340	9	73	775	18	720	0.0	543
MsaG005373	AT4G19990.5	44.054	740	340	9	73	775	18	720	0.0	543
MsaG005373	AT4G19990.2	44.054	740	340	9	73	775	18	720	0.0	543
MsaG005373	AT4G19990.7	44.054	740	340	9	73	775	32	734	0.0	543
MsaG005373	AT2G32250.5	40.166	722	368	7	75	772	37	718	4.39e-173	518
MsaG005373	AT2G32250.6	40.166	722	368	7	75	772	37	718	8.11e-173	518
MsaG005373	AT2G32250.1	40.166	722	368	7	75	772	37	718	8.11e-173	518
MsaG005373	AT2G32250.3	40.166	722	368	7	75	772	37	718	8.11e-173	518
MsaG005373	AT2G32250.2	40.166	722	368	7	75	772	37	718	9.27e-173	518
MsaG005373	AT2G32250.4	40.166	722	368	7	75	772	37	718	9.27e-173	518
MsaG005373	AT2G32250.7	40.028	717	366	7	80	772	1	677	2.36e-171	513
MsaG005373	AT2G32250.8	40.028	717	366	7	80	772	1	677	3.03e-171	513
MsaG005373	AT4G19990.1	43.348	699	322	9	114	775	2	663	2.34e-166	498
MsaG005373	AT4G38180.1	37.778	630	379	5	73	690	70	698	1.25e-146	450
MsaG005373	AT2G27110.2	33.816	621	374	9	75	688	48	638	1.34e-117	376
MsaG005373	AT2G27110.1	33.816	621	374	9	75	688	48	638	1.34e-117	376
MsaG005373	AT1G52520.1	34.694	637	379	13	76	693	85	703	1.35e-114	364
MsaG005373	AT2G27110.3	36.907	485	285	6	210	688	24	493	7.96e-107	343
MsaG005373	AT1G80010.1	32.381	630	397	14	76	686	95	714	3.19e-106	342
MsaG005373	AT3G06250.2	34.286	560	323	8	75	632	189	705	5.71e-100	327
MsaG005373	AT3G06250.2	33.929	112	63	1	64	175	16	116	6.09e-11	66.6
MsaG005373	AT3G06250.1	34.286	560	323	8	75	632	189	705	5.71e-100	327
MsaG005373	AT3G06250.1	33.929	112	63	1	64	175	16	116	6.09e-11	66.6
MsaG005373	AT3G06250.3	34.286	560	323	8	75	632	189	705	5.71e-100	327
MsaG005373	AT3G06250.3	33.929	112	63	1	64	175	16	116	6.09e-11	66.6
MsaG005373	AT5G18960.2	33.333	567	328	9	72	632	207	729	1.61e-95	316
MsaG005373	AT5G18960.1	33.333	567	328	9	72	632	207	729	1.61e-95	316
MsaG005373	AT4G38170.1	32.911	474	291	6	251	710	21	481	4.78e-87	286
MsaG005373	AT1G10240.2	29.322	590	384	13	76	644	48	625	7.64e-72	249
MsaG005373	AT1G10240.1	29.322	590	384	13	76	644	48	625	7.64e-72	249
MsaG005373	AT5G28530.3	27.721	588	376	16	71	630	50	616	6.87e-57	207
MsaG005373	AT5G28530.2	27.721	588	376	16	71	630	50	616	6.87e-57	207
MsaG005373	AT5G28530.1	27.211	588	383	15	71	630	50	620	8.70e-57	207
MsaG005373	AT5G28530.4	25.823	577	342	20	71	630	50	557	5.61e-40	157
MsaG005373	AT5G28530.5	26.343	577	335	21	71	630	50	553	5.73e-40	157
MsaG005373	AT2G43280.1	36.975	119	66	3	71	182	17	133	8.67e-16	77.4
MsaG005373	AT4G12850.4	39.604	101	60	1	75	175	10	109	5.49e-15	73.2
MsaG005373	AT4G12850.2	39.604	101	60	1	75	175	10	109	6.61e-15	72.8
MsaG005373	AT3G59470.3	34.286	105	68	1	75	178	69	173	2.67e-14	73.9
MsaG005373	AT3G59470.1	34.286	105	68	1	75	178	69	173	2.67e-14	73.9
MsaG005373	AT3G59470.2	34.286	105	68	1	75	178	81	185	2.78e-14	74.3
MsaG005373	AT4G12850.1	39.604	101	60	1	75	175	10	109	2.92e-14	72.4
MsaG005373	AT3G07500.1	30.323	155	98	2	69	221	26	172	6.88e-14	72.0
MsaG005373	AT2G43280.2	35.354	99	55	3	91	182	2	98	5.41e-11	62.4

Find 164 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TACTACAGGTTCCCTAATTT+TGG	0.145787	1:+80696731	None:intergenic
ACTGTTTCACAAACTCTTTA+AGG	0.204134	1:+80697159	None:intergenic
AACGTTTAAGAAATATATTT+TGG	0.206444	1:-80697796	MsaT005373.1:CDS
CTCTGTTCAGTGTTCCTGAT+TGG	0.220431	1:-80698818	MsaT005373.1:intron
TCGGATGCAATTGCCCTTAA+TGG	0.236596	1:-80696081	MsaT005373.1:CDS
ATTGCCCTTAATGGATATTA+TGG	0.237741	1:-80696072	MsaT005373.1:CDS
GGACCAAAGATGCCAAAATT+AGG	0.253094	1:-80696743	MsaT005373.1:CDS
TTTGGCATCAATAAATTCTT+TGG	0.254194	1:+80698279	None:intergenic
CATTTCAACATACATCTTTC+GGG	0.258771	1:+80698000	None:intergenic
TGTCGATTGTTCGAATATAA+AGG	0.270665	1:-80696846	MsaT005373.1:CDS
GAGTACCATAATATCCATTA+AGG	0.276199	1:+80696067	None:intergenic
TCAAGAGTATGCCAAATCTA+TGG	0.278613	1:-80698344	MsaT005373.1:CDS
ATACCTAGAGCACGCGAATT+TGG	0.279686	1:+80698261	None:intergenic
ACATTTCAACATACATCTTT+CGG	0.295052	1:+80697999	None:intergenic
AAGAAAGCTATGCCCCTCTT+AGG	0.295788	1:+80698439	None:intergenic
CTGTTTCACAAACTCTTTAA+GGG	0.296391	1:+80697160	None:intergenic
TTCCTGCTAGTTCATCAAAA+TGG	0.314122	1:-80698543	MsaT005373.1:CDS
CTGATTGGGCTGCCCATGTT+TGG	0.314534	1:-80698803	MsaT005373.1:CDS
TTGATCAGTGACTATAACTT+TGG	0.317440	1:+80697550	None:intergenic
TATCGTCCGACAACCACTTT+TGG	0.332110	1:-80695540	MsaT005373.1:CDS
AAAATGCAATTCTTAAACTT+TGG	0.338533	1:+80697398	None:intergenic
TAGTGCAGTGAGTGGAAGTA+TGG	0.343019	1:-80698512	MsaT005373.1:CDS
AAAATGTTCCATTTCCCATC+TGG	0.352283	1:+80698148	None:intergenic
TCTGTTCAGTGTTCCTGATT+GGG	0.355017	1:-80698817	MsaT005373.1:intron
TTCTTCAATTGCTTCCTTCA+AGG	0.360322	1:+80697520	None:intergenic
AACGACAATGGTGCAGAAAC+TGG	0.362647	1:-80696546	MsaT005373.1:CDS
GTTTGACAGAGGGCAGTATC+TGG	0.368111	1:-80697918	MsaT005373.1:CDS
GGCCGCAGCCCGGCTACAAT+TGG	0.381550	1:-80698567	MsaT005373.1:CDS
ATAGGTTAATTCTTCTGAAT+AGG	0.384277	1:-80697136	MsaT005373.1:CDS
GTTGTGTTCCTCTTCTTACT+TGG	0.388273	1:+80696465	None:intergenic
TGATCAAGACAAAGCCTTGA+AGG	0.399103	1:-80697534	MsaT005373.1:CDS
AGAAAGCTATGCCCCTCTTA+GGG	0.402896	1:+80698440	None:intergenic
ATCTATAGAATAGAAGAAGT+TGG	0.403398	1:+80697832	None:intergenic
AAGAGTTTGTGAAACAGTAT+AGG	0.409635	1:-80697154	MsaT005373.1:CDS
CAAACATGGGCAGCCCAATC+AGG	0.410906	1:+80698804	None:intergenic
AGTGGTGAATCCCATAGATT+TGG	0.415385	1:+80698333	None:intergenic
CAGAGGGCAGTATCTGGCTT+TGG	0.416018	1:-80697912	MsaT005373.1:CDS
CACTGGTTGCTTCCCCTAAG+AGG	0.417880	1:-80698453	MsaT005373.1:CDS
AATGCACATCCAAGCAATAT+AGG	0.426423	1:+80697647	None:intergenic
GACCAAAGATGCCAAAATTA+GGG	0.426826	1:-80696742	MsaT005373.1:CDS
TTGAACTCCATGATGATGTT+TGG	0.435488	1:-80697319	MsaT005373.1:CDS
TGATCAGTGACTATAACTTT+GGG	0.440778	1:+80697551	None:intergenic
AAATGTTCCATTTCCCATCT+GGG	0.441346	1:+80698149	None:intergenic
TTGCTGTGAAAGTGTGGATC+AGG	0.445132	1:+80695380	None:intergenic
TCAAAACATTGGGTCAATCA+TGG	0.447302	1:-80697957	MsaT005373.1:CDS
CTTTGTGTCCTATCTACTAC+AGG	0.448746	1:+80696717	None:intergenic
GTTGAAGTGTTGGGTGTAGC+TGG	0.449517	1:-80696990	MsaT005373.1:CDS
GTTCATGTAGGGAGGGCAAT+TGG	0.449744	1:-80695565	MsaT005373.1:intron
TCTATAGAATAGAAGAAGTT+GGG	0.462776	1:+80697833	None:intergenic
CACTCCCAACCTATATTGCT+TGG	0.465721	1:-80697656	MsaT005373.1:CDS
GGGAGATGGGCAAGTTATGC+TGG	0.466240	1:-80697885	MsaT005373.1:CDS
GCAGTATCTGGCTTTGGATG+AGG	0.466634	1:-80697906	MsaT005373.1:CDS
TCAAGATACCCTGCAGCAAA+TGG	0.468448	1:-80696295	MsaT005373.1:intron
ACTTAAATCTCCTTCACCTT+GGG	0.470138	1:-80697063	MsaT005373.1:CDS
GTTGAAATGTCTAGACAATC+TGG	0.471543	1:-80697986	MsaT005373.1:CDS
GAAATTCCAAGTTGAAGTGT+TGG	0.475026	1:-80697000	MsaT005373.1:CDS
AGCAACATTATAACTCTCTT+CGG	0.478706	1:+80696620	None:intergenic
ATTCTAACTGTTTCCAAACA+TGG	0.479663	1:+80698790	None:intergenic
ATGCCAAATTCGCGTGCTCT+AGG	0.479668	1:-80698264	MsaT005373.1:CDS
AGGGGCATAGCTTTCTTTGA+AGG	0.480618	1:-80698433	MsaT005373.1:CDS
GCAATATAGGTTGGGAGTGA+TGG	0.483077	1:+80697660	None:intergenic
ACTGGTTGCTTCCCCTAAGA+GGG	0.487153	1:-80698452	MsaT005373.1:CDS
CTGGTTCAATGAATCGCAAC+AGG	0.487960	1:-80700911	None:intergenic
AAATTCCAAGTTGAAGTGTT+GGG	0.488182	1:-80696999	MsaT005373.1:CDS
TTAGGGAACCTGTAGTAGAT+AGG	0.488222	1:-80696725	MsaT005373.1:CDS
CTGGTGGCTGTCAAAACATT+GGG	0.488703	1:-80697967	MsaT005373.1:CDS
GTATTTCAAGCATATTCAAA+AGG	0.489011	1:-80697861	MsaT005373.1:CDS
GTCAAACTGTTCATCTGTCC+AGG	0.491245	1:+80697370	None:intergenic
GTGTAGCTGGATGTCAATCT+AGG	0.493252	1:-80696977	MsaT005373.1:CDS
TTCACTCATTGTACGAAGAC+CGG	0.494147	1:-80697295	MsaT005373.1:CDS
CTGGCTTTGGATGAGGGAGA+TGG	0.494760	1:-80697899	MsaT005373.1:CDS
ACTCCAACAAAAGGAGCAAA+AGG	0.494816	1:+80697686	None:intergenic
ATCCAATTGTAGCCGGGCTG+CGG	0.496113	1:+80698565	None:intergenic
CACATCCAAGCAATATAGGT+TGG	0.500060	1:+80697651	None:intergenic
GTTTCAAATTCAATGCCGTT+AGG	0.501314	1:+80698391	None:intergenic
AGCAGGAATCCAATTGTAGC+CGG	0.501519	1:+80698558	None:intergenic
CACTTAAATCTCCTTCACCT+TGG	0.501635	1:-80697064	MsaT005373.1:CDS
CGAAAATGATATGCCAAAGC+TGG	0.503037	1:+80698091	None:intergenic
AGTACCATAATATCCATTAA+GGG	0.503128	1:+80696068	None:intergenic
TGATGGTTCACTCCAACAAA+AGG	0.509844	1:+80697677	None:intergenic
AGTATTGCGTTGAGTGAAGA+AGG	0.512046	1:-80696651	MsaT005373.1:CDS
GGTGAAGGAGATTTAAGTGC+AGG	0.515427	1:+80697068	None:intergenic
GCATCACACGGGTGGTGCAC+TGG	0.518829	1:-80698470	MsaT005373.1:CDS
CAGTATCTGGCTTTGGATGA+GGG	0.524524	1:-80697905	MsaT005373.1:CDS
CAAGAGTATGCCAAATCTAT+GGG	0.524696	1:-80698343	MsaT005373.1:CDS
TACAGTAAGTGGCCGCAGCC+CGG	0.528136	1:-80698577	MsaT005373.1:intron
ACATCCAAGCAATATAGGTT+GGG	0.528400	1:+80697652	None:intergenic
CAAAACATTGGGTCAATCAT+GGG	0.529150	1:-80697956	MsaT005373.1:CDS
GGGGCATAGCTTTCTTTGAA+GGG	0.530599	1:-80698432	MsaT005373.1:CDS
TTGTTTGGTTACTGAGGACA+TGG	0.530723	1:-80697598	MsaT005373.1:CDS
TCTTGAGTGTCGACAAGTAC+AGG	0.531111	1:+80696312	None:intergenic
CACTTGAACAACCGCAACGT+TGG	0.534327	1:+80696793	None:intergenic
TGGCTTTGGATGAGGGAGAT+GGG	0.535356	1:-80697898	MsaT005373.1:CDS
AAACTGCATCATTAAAGCTA+AGG	0.535685	1:+80697747	None:intergenic
AGCTTTCTTTGAAGGGGACA+CGG	0.537323	1:-80698425	MsaT005373.1:CDS
AAACACAAACCATTTGCTGC+AGG	0.538027	1:+80696286	None:intergenic
TTCTAACTGTTTCCAAACAT+GGG	0.539209	1:+80698791	None:intergenic
GAGGACATGGCTTAGAGCGA+TGG	0.543287	1:-80697585	MsaT005373.1:CDS
GAAAAGCAATGACGTACACT+TGG	0.544275	1:+80697491	None:intergenic
CTGAAGGCTATATCCAAAAG+TGG	0.546535	1:+80695527	None:intergenic
CTACACCCAACACTTCAACT+TGG	0.546709	1:+80696994	None:intergenic
AAAGTGGGTACCGACATACA+TGG	0.548302	1:-80697270	MsaT005373.1:CDS
TATATTGCTTGGATGTGCAT+TGG	0.548998	1:-80697645	MsaT005373.1:CDS
TCTGGTGGCTGTCAAAACAT+TGG	0.549465	1:-80697968	MsaT005373.1:CDS
CTCATTATATCATGAAGAGA+TGG	0.550080	1:-80696764	MsaT005373.1:CDS
AAATTCGCGTGCTCTAGGTA+TGG	0.552712	1:-80698259	MsaT005373.1:CDS
CCTCAGTAACCAAACAAAAG+TGG	0.552907	1:+80697604	None:intergenic
AGTGAAACCAAACATCATCA+TGG	0.555179	1:+80697312	None:intergenic
CACTCAATGCATGTCTGCAA+AGG	0.555274	1:+80696820	None:intergenic
CTATATCCAAAAGTGGTTGT+CGG	0.558538	1:+80695534	None:intergenic
TGTCAATCTAGGACAGAGGT+TGG	0.561454	1:-80696966	MsaT005373.1:CDS
GAACACAACTAGGAAAAGAA+AGG	0.562569	1:-80696451	MsaT005373.1:intron
TCAGCAGAATGTGCAAGGAC+TGG	0.567200	1:-80696046	MsaT005373.1:intron
GTAAGAAGAGGAACACAACT+AGG	0.569051	1:-80696461	MsaT005373.1:CDS
CTTCAAAACCAAGTAAGAAG+AGG	0.570332	1:-80696473	MsaT005373.1:CDS
AAGTGGGTACCGACATACAT+GGG	0.571532	1:-80697269	MsaT005373.1:CDS
CTCAGTAACCAAACAAAAGT+GGG	0.573591	1:+80697605	None:intergenic
TTTCAAGCATATTCAAAAGG+AGG	0.574379	1:-80697858	MsaT005373.1:CDS
CTCTTCATGATATAATGAGA+TGG	0.574857	1:+80696768	None:intergenic
GCAGGAATCCAATTGTAGCC+GGG	0.576667	1:+80698559	None:intergenic
GTAAATAACTCTAACGACAA+TGG	0.578738	1:-80696558	MsaT005373.1:CDS
GGGCATAGCTTTCTTTGAAG+GGG	0.579841	1:-80698431	MsaT005373.1:CDS
GGACACAAAGGATACAAACT+AGG	0.580462	1:-80696704	MsaT005373.1:CDS
AGGACATGGCTTAGAGCGAT+GGG	0.585225	1:-80697584	MsaT005373.1:CDS
GAACTGTTGCTGTGAAAGTG+TGG	0.585833	1:+80695374	None:intergenic
GGTGCAGAAACTGGCAACAA+TGG	0.585898	1:-80696537	MsaT005373.1:CDS
TCAAATTCAATGCCGTTAGG+TGG	0.590422	1:+80698394	None:intergenic
CACACATCATTATAACGTTG+AGG	0.592933	1:+80696681	None:intergenic
TCTAGGACAGAGGTTGGAGA+TGG	0.594905	1:-80696960	MsaT005373.1:CDS
GCTAGTTCATCAAAATGGAA+TGG	0.603258	1:-80698538	MsaT005373.1:CDS
AACACAAACCATTTGCTGCA+GGG	0.603531	1:+80696287	None:intergenic
GAAAGCTATGCCCCTCTTAG+GGG	0.607330	1:+80698441	None:intergenic
GGTACTCAGCAGAATGTGCA+AGG	0.609447	1:-80696051	MsaT005373.1:CDS
CGAGTTATCAGTTTGACAGA+GGG	0.612110	1:-80697928	MsaT005373.1:CDS
AACAGTTTGACATGAGATGG+TGG	0.621739	1:-80697358	MsaT005373.1:CDS
CTGGTTGCTTCCCCTAAGAG+GGG	0.625137	1:-80698451	MsaT005373.1:CDS
GGAGTAACACCTGAGTCTGA+TGG	0.629153	1:-80698238	MsaT005373.1:CDS
AAAAGCAATGACGTACACTT+GGG	0.629160	1:+80697492	None:intergenic
ACTGTCGGAACGTTGAGGTG+TGG	0.629360	1:+80697223	None:intergenic
CTGCTCCTACCATCAGACTC+AGG	0.632022	1:+80698229	None:intergenic
AGTTCATCAAAATGGAATGG+TGG	0.634115	1:-80698535	MsaT005373.1:CDS
AAAGAAAGAGTTCACACTGT+CGG	0.634665	1:+80697208	None:intergenic
CATGGCTTAGAGCGATGGGA+GGG	0.635529	1:-80697580	MsaT005373.1:CDS
TCTTCTGAATAGGTATGATG+AGG	0.638772	1:-80697126	MsaT005373.1:CDS
TTGAGTGTTCTCCAACGTTG+CGG	0.639483	1:-80696804	MsaT005373.1:CDS
AGTGCAGTGAGTGGAAGTAT+GGG	0.641203	1:-80698511	MsaT005373.1:CDS
GTCAATGAAGAGCATCACAC+GGG	0.641639	1:-80698481	MsaT005373.1:CDS
ATGAACAGTTTGACATGAGA+TGG	0.648940	1:-80697361	MsaT005373.1:CDS
TGGATGTCAATCTAGGACAG+AGG	0.649330	1:-80696970	MsaT005373.1:CDS
ACATGGCTTAGAGCGATGGG+AGG	0.651552	1:-80697581	MsaT005373.1:CDS
AATGGTGGTAGTGCAGTGAG+TGG	0.652328	1:-80698520	MsaT005373.1:CDS
TATAGTTCAAGATTACGAGA+AGG	0.655112	1:-80696922	MsaT005373.1:CDS
AGTGGGTACCGACATACATG+GGG	0.658586	1:-80697268	MsaT005373.1:CDS
TTCACACTGTCGGAACGTTG+AGG	0.659741	1:+80697218	None:intergenic
CTATTCTATAGATTTAAACG+AGG	0.660746	1:-80697822	MsaT005373.1:CDS
ACGAGTTATCAGTTTGACAG+AGG	0.665307	1:-80697929	MsaT005373.1:CDS
TGTCAATGAAGAGCATCACA+CGG	0.667976	1:-80698482	MsaT005373.1:CDS
AATGAAGAGCATCACACGGG+TGG	0.670295	1:-80698478	MsaT005373.1:CDS
TAACACCTGAGTCTGATGGT+AGG	0.675623	1:-80698234	MsaT005373.1:CDS
CTGTAGTAGATAGGACACAA+AGG	0.687200	1:-80696716	MsaT005373.1:CDS
TTGGAACGAGTTGAGCTCAG+AGG	0.703393	1:-80696880	MsaT005373.1:CDS
ACAGTTTGACATGAGATGGT+GGG	0.706939	1:-80697357	MsaT005373.1:CDS
GAAATGTCTAGACAATCTGG+TGG	0.763154	1:-80697983	MsaT005373.1:CDS
GTGGGTACCGACATACATGG+GGG	0.773235	1:-80697267	MsaT005373.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	80695361	80700925	80695361	ID=MsaG005373
Chr1	mRNA	80695361	80700925	80695361	ID=MsaT005373.1;Parent=MsaG005373
Chr1	exon	80695361	80695408	80695361	ID=MsaT005373.1.exon7;Parent=MsaT005373.1
Chr1	CDS	80695361	80695408	80695361	ID=cds.MsaT005373.1;Parent=MsaT005373.1
Chr1	exon	80695527	80695577	80695527	ID=MsaT005373.1.exon6;Parent=MsaT005373.1
Chr1	CDS	80695527	80695577	80695527	ID=cds.MsaT005373.1;Parent=MsaT005373.1
Chr1	exon	80696047	80696115	80696047	ID=MsaT005373.1.exon5;Parent=MsaT005373.1
Chr1	CDS	80696047	80696115	80696047	ID=cds.MsaT005373.1;Parent=MsaT005373.1
Chr1	exon	80696296	80696352	80696296	ID=MsaT005373.1.exon4;Parent=MsaT005373.1
Chr1	CDS	80696296	80696352	80696296	ID=cds.MsaT005373.1;Parent=MsaT005373.1
Chr1	exon	80696452	80698594	80696452	ID=MsaT005373.1.exon3;Parent=MsaT005373.1
Chr1	CDS	80696452	80698594	80696452	ID=cds.MsaT005373.1;Parent=MsaT005373.1
Chr1	exon	80698798	80698830	80698798	ID=MsaT005373.1.exon2;Parent=MsaT005373.1
Chr1	CDS	80698798	80698830	80698798	ID=cds.MsaT005373.1;Parent=MsaT005373.1
Chr1	exon	80700912	80700925	80700912	ID=MsaT005373.1.exon1;Parent=MsaT005373.1
Chr1	CDS	80700912	80700925	80700912	ID=cds.MsaT005373.1;Parent=MsaT005373.1

Gene Sequence

>MsaT005373.1

ATGAATCGCAACAGTGTTCCTGATTGGGCTGCCCATGTTTGGAAACATAAGTGGCCGCAGCCCGGCTACAATTGGATTCCTGCTAGTTCATCAAAATGGAATGGTGGTAGTGCAGTGAGTGGAAGTATGGGTGACTCTGTCAATGAAGAGCATCACACGGGTGGTGCACTGGTTGCTTCCCCTAAGAGGGGCATAGCTTTCTTTGAAGGGGACACGGATTTTGAGCCACCTAACGGCATTGAATTTGAAACTCATGAAGCAGCATATTCATTTTATCAAGAGTATGCCAAATCTATGGGATTCACCACTTCCATTAAAAACAGCAGACGATCAAAGAAGACCAAAGAATTTATTGATGCCAAATTCGCGTGCTCTAGGTATGGAGTAACACCTGAGTCTGATGGTAGGAGCAGTCGAAGATCGAGTGTAAAGAAGACAGATTGCAAAGCTTGCATGCACGTGAAGAAAAACCCAGATGGGAAATGGAACATTTTTGAATTTATAAAGGATCATAATCATGAACTTTTACCAGCTTTGGCATATCATTTTCGGATTCATGGAAACGTGAAGTTAGCTGACAAGAATAATATTGATATCTTGCATGCTGTTAGTGAACGTACCCGAAAGATGTATGTTGAAATGTCTAGACAATCTGGTGGCTGTCAAAACATTGGGTCAATCATGGGTGATACGAGTTATCAGTTTGACAGAGGGCAGTATCTGGCTTTGGATGAGGGAGATGGGCAAGTTATGCTGGAGTATTTCAAGCATATTCAAAAGGAGGATCCCAACTTCTTCTATTCTATAGATTTAAACGAGGAACAACGTTTAAGAAATATATTTTGGGTTGATTCAAAAAGCATCGATGATTACCTTAGCTTTAATGATGCAGTTTCATTTGATACTTCCTACATAAAAAGCAACGATAAGTTGCCTTTTGCTCCTTTTGTTGGAGTGAACCATCACTCCCAACCTATATTGCTTGGATGTGCATTGGTTGCTGATGAGACTAAGCCCACTTTTGTTTGGTTACTGAGGACATGGCTTAGAGCGATGGGAGGGCAAGCTCCCAAAGTTATAGTCACTGATCAAGACAAAGCCTTGAAGGAAGCAATTGAAGAAGTCTTCCCAAGTGTACGTCATTGCTTTTCTCTTTGTCACATATTGGAAAAGATACCTGAAAATCTGTCTTTTGTGATAAAACAGTACAAGAACTTCTTGCCAAAGTTTAAGAATTGCATTTTTAAGTCCTGGACAGATGAACAGTTTGACATGAGATGGTGGGAAATAGTGACTATATTTGAACTCCATGATGATGTTTGGTTTCACTCATTGTACGAAGACCGGAAAAAGTGGGTACCGACATACATGGGGGATGTCTTTTTAGCTGGAATGTCCACACCTCAACGTTCCGACAGTGTGAACTCTTTCTTTGACAAATACATTCATAAGAAAATCACCCTTAAAGAGTTTGTGAAACAGTATAGGTTAATTCTTCTGAATAGGTATGATGAGGAAGAAATCGCAGATTTTGATACATTGCACAAACAACCTGCACTTAAATCTCCTTCACCTTGGGAAAAACAAATGTCAACAATTTATACACATGCAATATTTAAGAAATTCCAAGTTGAAGTGTTGGGTGTAGCTGGATGTCAATCTAGGACAGAGGTTGGAGATGGAACTGTTGTGAGATATATAGTTCAAGATTACGAGAAGGATGAAGAGTTTTTGGTAACTTGGAACGAGTTGAGCTCAGAGGTCTCTTGCTTCTGTCGATTGTTCGAATATAAAGGTTTCCTTTGCAGACATGCATTGAGTGTTCTCCAACGTTGCGGTTGTTCAAGTGTTCCATCTCATTATATCATGAAGAGATGGACCAAAGATGCCAAAATTAGGGAACCTGTAGTAGATAGGACACAAAGGATACAAACTAGGCCTCAACGTTATAATGATGTGTGCAAACGAAGTATTGCGTTGAGTGAAGAAGGATCATCATCCGAAGAGAGTTATAATGTTGCTTTGCGCGCGCTTGTTGATGCTTTGAAGAACTGTGTACTTGTAAATAACTCTAACGACAATGGTGCAGAAACTGGCAACAATGGTTACAGTCTTCGCGAAGCAGAAGAATATCAGAGTACCCTTGCTTCAAAACCAAGTAAGAAGAGGAACACAACTAGGAAAAGAAAGGTGCAACAAGAGCAGAGTCCTGTACTTGTCGACACTCAAGATACCCTGCAGCAAATGGATAATCTTAGCTCGGATGCAATTGCCCTTAATGGATATTATGGTACTCAGCAGAATGTGCAAGGACTGGGAGGGCAATTGGAGTATCGTCCGACAACCACTTTTGGATATAGCCTTCAGGATGAGCCTGATCCACACTTTCACAGCAACAGTTCAAGAAATACTTAG

Protein sequence

>MsaT005373.1

MNRNSVPDWAAHVWKHKWPQPGYNWIPASSSKWNGGSAVSGSMGDSVNEEHHTGGALVASPKRGIAFFEGDTDFEPPNGIEFETHEAAYSFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGVTPESDGRSSRRSSVKKTDCKACMHVKKNPDGKWNIFEFIKDHNHELLPALAYHFRIHGNVKLADKNNIDILHAVSERTRKMYVEMSRQSGGCQNIGSIMGDTSYQFDRGQYLALDEGDGQVMLEYFKHIQKEDPNFFYSIDLNEEQRLRNIFWVDSKSIDDYLSFNDAVSFDTSYIKSNDKLPFAPFVGVNHHSQPILLGCALVADETKPTFVWLLRTWLRAMGGQAPKVIVTDQDKALKEAIEEVFPSVRHCFSLCHILEKIPENLSFVIKQYKNFLPKFKNCIFKSWTDEQFDMRWWEIVTIFELHDDVWFHSLYEDRKKWVPTYMGDVFLAGMSTPQRSDSVNSFFDKYIHKKITLKEFVKQYRLILLNRYDEEEIADFDTLHKQPALKSPSPWEKQMSTIYTHAIFKKFQVEVLGVAGCQSRTEVGDGTVVRYIVQDYEKDEEFLVTWNELSSEVSCFCRLFEYKGFLCRHALSVLQRCGCSSVPSHYIMKRWTKDAKIREPVVDRTQRIQTRPQRYNDVCKRSIALSEEGSSSEESYNVALRALVDALKNCVLVNNSNDNGAETGNNGYSLREAEEYQSTLASKPSKKRNTTRKRKVQQEQSPVLVDTQDTLQQMDNLSSDAIALNGYYGTQQNVQGLGGQLEYRPTTTFGYSLQDEPDPHFHSNSSRNT*