AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG005549

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG005549 MtrunA17_Chr1g0209661 93.103 319 13 4 1 318 2 312 0.0 599
MsaG005549 MtrunA17_Chr1g0194291 66.452 155 48 2 14 166 7 159 4.87e-73 226
MsaG005549 MtrunA17_Chr1g0194301 55.689 167 70 1 26 188 33 199 2.90e-68 214
MsaG005549 MtrunA17_Chr2g0293911 72.857 140 38 0 20 159 18 157 1.80e-67 214
MsaG005549 MtrunA17_Chr4g0068921 69.784 139 42 0 21 159 19 157 4.18e-65 203
MsaG005549 MtrunA17_Chr6g0450101 73.333 120 32 0 15 134 3 122 8.67e-65 203
MsaG005549 MtrunA17_Chr7g0228231 75.630 119 28 1 14 132 3 120 1.14e-64 202
MsaG005549 MtrunA17_Chr1g0168661 69.091 110 34 0 22 131 17 126 3.38e-53 175
MsaG005549 MtrunA17_Chr1g0186061 66.667 108 36 0 22 129 16 123 3.95e-51 169
MsaG005549 MtrunA17_Chr2g0327821 61.468 109 42 0 23 131 3 111 2.44e-47 159
MsaG005549 MtrunA17_Chr4g0030881 60.177 113 38 1 27 132 8 120 7.23e-46 156
MsaG005549 MtrunA17_Chr5g0410961 60.000 115 46 0 22 136 8 122 8.13e-46 158
MsaG005549 MtrunA17_Chr1g0187761 60.870 115 45 0 26 140 12 126 2.77e-45 154
MsaG005549 MtrunA17_Chr7g0275911 66.038 106 36 0 26 131 12 117 4.62e-45 154
MsaG005549 MtrunA17_Chr4g0039971 55.000 120 54 0 22 141 9 128 1.28e-44 155
MsaG005549 MtrunA17_Chr4g0048511 58.621 116 48 0 21 136 8 123 1.33e-44 155
MsaG005549 MtrunA17_Chr8g0346561 63.551 107 39 0 26 132 12 118 5.35e-44 152
MsaG005549 MtrunA17_Chr1g0167691 61.111 108 42 0 22 129 8 115 5.52e-44 151
MsaG005549 MtrunA17_Chr5g0395281 53.279 122 57 0 20 141 6 127 7.60e-44 152
MsaG005549 MtrunA17_Chr2g0281071 57.265 117 50 0 20 136 7 123 8.16e-44 153
MsaG005549 MtrunA17_Chr4g0070611 62.963 108 40 0 26 133 12 119 1.41e-43 151
MsaG005549 MtrunA17_Chr4g0068061 62.500 104 39 0 26 129 12 115 2.09e-43 152
MsaG005549 MtrunA17_Chr3g0121241 63.462 104 38 0 26 129 42 145 2.13e-43 151
MsaG005549 MtrunA17_Chr1g0180391 55.833 120 53 0 12 131 5 124 2.71e-43 148
MsaG005549 MtrunA17_Chr1g0203411 58.559 111 46 0 22 132 8 118 2.96e-43 150
MsaG005549 MtrunA17_Chr3g0115821 57.391 115 49 0 22 136 8 122 3.70e-43 151
MsaG005549 MtrunA17_Chr4g0070641 62.963 108 40 0 26 133 12 119 7.46e-43 145
MsaG005549 MtrunA17_Chr3g0080861 57.547 106 45 0 26 131 37 142 7.62e-43 154
MsaG005549 MtrunA17_Chr1g0193371 52.800 125 59 0 23 147 9 133 1.38e-42 150
MsaG005549 MtrunA17_Chr4g0037141 55.200 125 56 0 22 146 8 132 1.41e-42 148
MsaG005549 MtrunA17_Chr3g0131121 55.285 123 55 0 22 144 8 130 1.56e-42 148
MsaG005549 MtrunA17_Chr3g0099131 56.075 107 47 0 26 132 41 147 1.86e-42 153
MsaG005549 MtrunA17_Chr8g0354661 52.991 117 55 0 15 131 26 142 2.82e-42 153
MsaG005549 MtrunA17_Chr8g0387421 58.182 110 46 0 23 132 9 118 2.90e-42 148
MsaG005549 MtrunA17_Chr2g0330041 58.095 105 44 0 25 129 11 115 4.61e-42 150
MsaG005549 MtrunA17_Chr7g0228891 53.782 119 55 0 26 144 12 130 4.98e-42 146
MsaG005549 MtrunA17_Chr2g0323411 57.391 115 49 0 22 136 8 122 6.63e-42 147
MsaG005549 MtrunA17_Chr3g0110351 52.542 118 56 0 26 143 12 129 9.55e-42 147
MsaG005549 MtrunA17_Chr1g0167661 58.333 108 45 0 22 129 8 115 9.81e-42 145
MsaG005549 MtrunA17_Chr8g0385321 56.522 115 50 0 22 136 8 122 1.04e-41 147
MsaG005549 MtrunA17_Chr4g0032401 52.542 118 56 0 18 135 9 126 1.24e-41 147
MsaG005549 MtrunA17_Chr2g0323351 53.968 126 56 1 22 145 8 133 2.27e-41 144
MsaG005549 MtrunA17_Chr4g0022931 53.600 125 55 1 26 147 13 137 2.40e-41 144
MsaG005549 MtrunA17_Chr4g0022901 60.952 105 41 0 26 130 13 117 2.48e-41 144
MsaG005549 MtrunA17_Chr7g0261281 38.462 234 127 4 26 242 12 245 3.07e-41 144
MsaG005549 MtrunA17_Chr2g0328771 56.481 108 47 0 26 133 20 127 3.46e-41 145
MsaG005549 MtrunA17_Chr6g0453471 57.658 111 47 0 26 136 12 122 3.87e-41 146
MsaG005549 MtrunA17_Chr7g0274581 54.545 110 50 0 26 135 12 121 3.95e-41 142
MsaG005549 MtrunA17_Chr7g0270891 52.033 123 59 0 25 147 11 133 4.44e-41 146
MsaG005549 MtrunA17_Chr7g0217741 57.658 111 47 0 26 136 12 122 5.21e-41 145
MsaG005549 MtrunA17_Chr5g0434571 53.448 116 54 0 26 141 48 163 9.04e-41 145
MsaG005549 MtrunA17_Chr4g0057031 55.856 111 49 0 26 136 12 122 1.23e-40 143
MsaG005549 MtrunA17_Chr1g0193801 51.220 123 60 0 25 147 11 133 1.23e-40 145
MsaG005549 MtrunA17_Chr5g0397231 61.000 100 39 0 23 122 9 108 1.92e-40 144
MsaG005549 MtrunA17_Chr8g0349261 56.250 112 48 1 26 136 13 124 2.07e-40 143
MsaG005549 MtrunA17_Chr8g0342541 57.143 105 45 0 25 129 11 115 2.37e-40 144
MsaG005549 MtrunA17_Chr1g0151941 55.963 109 47 1 22 129 8 116 3.31e-40 141
MsaG005549 MtrunA17_Chr4g0022881 57.009 107 46 0 22 128 8 114 3.57e-40 140
MsaG005549 MtrunA17_Chr4g0022911 59.048 105 43 0 26 130 13 117 4.27e-40 142
MsaG005549 MtrunA17_Chr8g0343831 57.407 108 46 0 25 132 7 114 6.32e-40 140
MsaG005549 MtrunA17_Chr4g0042671 54.167 120 55 0 22 141 8 127 7.38e-40 144
MsaG005549 MtrunA17_Chr3g0088461 53.982 113 52 0 19 131 15 127 8.23e-40 142
MsaG005549 MtrunA17_Chr5g0435101 49.587 121 61 0 22 142 7 127 9.36e-40 139
MsaG005549 MtrunA17_Chr1g0194951 59.615 104 42 0 26 129 12 115 1.26e-39 142
MsaG005549 MtrunA17_Chr8g0342521 52.500 120 57 0 25 144 11 130 1.41e-39 142
MsaG005549 MtrunA17_Chr4g0055981 49.624 133 65 1 1 133 32 162 1.43e-39 139
MsaG005549 MtrunA17_Chr1g0154031 53.774 106 49 0 26 131 76 181 1.79e-39 143
MsaG005549 MtrunA17_Chr6g0452271 47.200 125 66 0 22 146 8 132 3.34e-39 140
MsaG005549 MtrunA17_Chr1g0203441 56.250 112 48 1 27 137 14 125 3.49e-39 139
MsaG005549 MtrunA17_Chr2g0309911 54.286 105 48 0 25 129 10 114 4.94e-39 140
MsaG005549 MtrunA17_Chr3g0103281 52.174 115 55 0 22 136 8 122 6.40e-39 140
MsaG005549 MtrunA17_Chr3g0117091 38.462 208 116 4 25 231 11 207 7.06e-39 140
MsaG005549 MtrunA17_Chr1g0211161 50.420 119 59 0 23 141 10 128 2.17e-38 135
MsaG005549 MtrunA17_Chr7g0271241 61.224 98 38 0 25 122 11 108 2.90e-38 139
MsaG005549 MtrunA17_Chr4g0044421 55.046 109 49 0 28 136 14 122 3.74e-38 134
MsaG005549 MtrunA17_Chr4g0058631 50.420 119 59 0 23 141 9 127 3.78e-38 139
MsaG005549 MtrunA17_Chr4g0022891 51.327 113 55 0 22 134 8 120 1.06e-37 134
MsaG005549 MtrunA17_Chr7g0217221 37.273 220 89 5 26 220 12 207 1.45e-37 135
MsaG005549 MtrunA17_Chr3g0092401 46.269 134 66 2 26 154 13 145 3.36e-37 135
MsaG005549 MtrunA17_Chr2g0311221 54.808 104 47 0 22 125 10 113 5.53e-37 135
MsaG005549 MtrunA17_Chr7g0254411 50.442 113 56 0 22 134 8 120 6.21e-37 135
MsaG005549 MtrunA17_Chr6g0470971 47.619 126 65 1 16 140 4 129 7.78e-37 133
MsaG005549 MtrunA17_Chr8g0342481 55.660 106 46 1 25 129 11 116 8.05e-37 136
MsaG005549 MtrunA17_Chr2g0322521 52.830 106 50 0 26 131 29 134 1.41e-36 135
MsaG005549 MtrunA17_Chr4g0028311 55.046 109 48 1 22 129 8 116 4.42e-36 132
MsaG005549 MtrunA17_Chr6g0453211 56.566 99 43 0 26 124 12 110 4.60e-36 132
MsaG005549 MtrunA17_Chr4g0060721 52.885 104 49 0 26 129 13 116 1.01e-35 131
MsaG005549 MtrunA17_Chr1g0192411 51.402 107 52 0 25 131 11 117 1.03e-35 133
MsaG005549 MtrunA17_Chr7g0269831 56.190 105 46 0 26 130 12 116 1.50e-35 131
MsaG005549 MtrunA17_Chr5g0417821 51.351 111 54 0 26 136 7 117 1.58e-35 130
MsaG005549 MtrunA17_Chr8g0334881 45.614 114 61 1 21 133 5 118 8.04e-35 129
MsaG005549 MtrunA17_Chr1g0152011 55.238 105 46 1 26 129 12 116 2.65e-34 128
MsaG005549 MtrunA17_Chr7g0264641 50.909 110 53 1 26 134 12 121 3.93e-34 125
MsaG005549 MtrunA17_Chr2g0327351 56.000 100 43 1 26 124 12 111 4.26e-34 127
MsaG005549 MtrunA17_Chr3g0135311 55.238 105 46 1 26 129 12 116 6.61e-34 127
MsaG005549 MtrunA17_Chr5g0400821 54.286 105 47 1 26 129 12 116 6.74e-34 126
MsaG005549 MtrunA17_Chr5g0434931 53.846 104 48 0 26 129 35 138 6.91e-34 125
MsaG005549 MtrunA17_Chr5g0434831 54.286 105 48 0 26 130 7 111 1.47e-33 122
MsaG005549 MtrunA17_Chr4g0054391 51.240 121 46 2 26 133 12 132 2.08e-33 124
MsaG005549 MtrunA17_Chr7g0228991 46.923 130 67 1 3 130 4 133 3.88e-33 123
MsaG005549 MtrunA17_Chr5g0434911 52.885 104 49 0 26 129 21 124 5.43e-33 123
MsaG005549 MtrunA17_Chr5g0440781 36.313 179 81 4 27 204 13 159 5.94e-33 120
MsaG005549 MtrunA17_Chr5g0434841 53.333 105 49 0 26 130 20 124 1.07e-32 123
MsaG005549 MtrunA17_Chr8g0360111 56.566 99 43 0 26 124 25 123 1.11e-32 122
MsaG005549 MtrunA17_Chr6g0487491 49.573 117 50 2 22 129 8 124 1.43e-32 121
MsaG005549 MtrunA17_Chr7g0240821 52.336 107 51 0 30 136 5 111 2.24e-32 120
MsaG005549 MtrunA17_Chr5g0441141 48.544 103 52 1 27 128 13 115 3.07e-32 120
MsaG005549 MtrunA17_Chr5g0440761 36.313 179 81 4 27 204 13 159 3.12e-32 120
MsaG005549 MtrunA17_Chr7g0220341 52.336 107 49 1 26 130 25 131 3.14e-32 120
MsaG005549 MtrunA17_Chr4g0072751 56.000 100 43 1 26 124 12 111 1.39e-31 120
MsaG005549 MtrunA17_Chr7g0247131 60.759 79 31 0 58 136 10 88 8.49e-31 117
MsaG005549 MtrunA17_Chr3g0099141 50.000 86 43 0 22 107 36 121 2.81e-30 112
MsaG005549 MtrunA17_Chr5g0441131 42.593 108 61 1 25 131 8 115 1.21e-29 111
MsaG005549 MtrunA17_Chr4g0013361 41.441 111 64 1 22 131 6 116 2.11e-29 114
MsaG005549 MtrunA17_Chr2g0323321 57.831 83 35 0 24 106 9 91 4.55e-28 105
MsaG005549 MtrunA17_Chr7g0238631 46.667 105 55 1 25 129 110 213 1.34e-27 112
MsaG005549 MtrunA17_Chr6g0454921 41.964 112 64 1 19 130 6 116 1.55e-27 106
MsaG005549 MtrunA17_Chr4g0042611 56.790 81 35 0 22 102 8 88 2.12e-27 102
MsaG005549 MtrunA17_Chr2g0294811 52.941 85 40 0 22 106 8 92 2.72e-27 103
MsaG005549 MtrunA17_Chr5g0401731 40.678 118 68 2 19 136 7 122 6.53e-27 107
MsaG005549 MtrunA17_Chr5g0395221 57.143 77 33 0 26 102 12 88 3.70e-26 99.4
MsaG005549 MtrunA17_Chr8g0342511 56.962 79 34 0 23 101 9 87 5.63e-26 99.4
MsaG005549 MtrunA17_Chr4g0008551 42.718 103 58 1 28 130 38 139 9.25e-26 105
MsaG005549 MtrunA17_Chr8g0342531 54.321 81 37 0 23 103 9 89 1.12e-25 100
MsaG005549 MtrunA17_Chr4g0058991 40.984 122 68 3 9 129 191 309 1.36e-25 106
MsaG005549 MtrunA17_Chr3g0133601 41.748 103 59 1 28 130 37 138 1.69e-25 101
MsaG005549 MtrunA17_Chr3g0117511 33.333 159 99 3 28 186 183 334 4.39e-25 104
MsaG005549 MtrunA17_Chr5g0429661 43.269 104 58 1 26 129 120 222 7.93e-25 102
MsaG005549 MtrunA17_Chr4g0053431 40.777 103 60 1 28 130 5 106 1.68e-24 100
MsaG005549 MtrunA17_Chr6g0460661 43.396 106 59 1 28 133 16 120 2.14e-24 97.1
MsaG005549 MtrunA17_Chr5g0417621 37.086 151 81 3 18 163 119 260 2.88e-24 102
MsaG005549 MtrunA17_Chr3g0139671 40.952 105 61 1 25 129 82 185 3.48e-24 103
MsaG005549 MtrunA17_Chr3g0139671 34.000 100 64 2 28 126 33 131 3.54e-12 67.4
MsaG005549 MtrunA17_Chr1g0157731 40.952 105 61 1 25 129 88 191 3.98e-24 103
MsaG005549 MtrunA17_Chr1g0157731 34.000 100 64 2 28 126 39 137 5.61e-12 66.6
MsaG005549 MtrunA17_Chr6g0480581 30.702 228 120 7 28 245 4 203 5.98e-24 98.2
MsaG005549 MtrunA17_Chr8g0342461 51.220 82 39 1 23 103 9 90 2.15e-23 93.6
MsaG005549 MtrunA17_Chr7g0228531 32.159 227 134 8 28 248 220 432 2.51e-23 99.4
MsaG005549 MtrunA17_Chr8g0342471 51.220 82 39 1 23 103 9 90 7.88e-23 92.4
MsaG005549 MtrunA17_Chr7g0238651 42.991 107 59 1 28 132 7 113 1.09e-22 96.7
MsaG005549 MtrunA17_Chr4g0042501 36.029 136 78 2 28 163 105 231 2.72e-22 96.7
MsaG005549 MtrunA17_Chr5g0397841 44.444 99 54 1 24 122 106 203 1.85e-21 94.4
MsaG005549 MtrunA17_Chr5g0437321 40.594 101 59 1 22 122 13 112 4.27e-21 91.3
MsaG005549 MtrunA17_Chr8g0362231 38.686 137 80 3 9 143 1 135 6.37e-21 92.8
MsaG005549 MtrunA17_Chr7g0229101 58.571 70 29 0 58 127 4 73 1.29e-20 88.2
MsaG005549 MtrunA17_Chr3g0093811 50.633 79 39 0 58 136 14 92 1.34e-20 89.4
MsaG005549 MtrunA17_Chr6g0453751 46.154 91 40 2 26 107 20 110 1.46e-20 85.9
MsaG005549 MtrunA17_Chr5g0425591 41.758 91 52 1 19 108 2 92 2.29e-20 84.3
MsaG005549 MtrunA17_Chr7g0254261 40.000 105 62 1 28 132 89 192 3.05e-20 89.7
MsaG005549 MtrunA17_Chr3g0125801 39.130 115 69 1 28 142 16 129 3.84e-20 88.6
MsaG005549 MtrunA17_Chr6g0460671 38.655 119 69 2 15 133 89 203 4.17e-20 89.4
MsaG005549 MtrunA17_Chr5g0416341 41.584 101 58 1 31 131 29 128 5.79e-20 90.1
MsaG005549 MtrunA17_Chr5g0434901 60.294 68 27 0 60 127 7 74 9.88e-20 83.2
MsaG005549 MtrunA17_Chr7g0228481 31.754 211 121 8 28 232 220 413 2.77e-19 87.8
MsaG005549 MtrunA17_Chr7g0228401 41.748 103 55 2 39 141 290 387 5.29e-19 87.4
MsaG005549 MtrunA17_Chr7g0229131 50.000 82 36 1 59 140 5 81 9.83e-19 82.0
MsaG005549 MtrunA17_Chr7g0233061 39.175 97 56 2 28 124 180 273 7.72e-17 80.1
MsaG005549 MtrunA17_Chr1g0177901 34.722 144 80 4 38 177 4 137 2.87e-16 76.3
MsaG005549 MtrunA17_Chr1g0193901 42.857 84 46 2 26 107 11 94 2.00e-13 65.9
MsaG005549 MtrunA17_Chr1g0193891 42.857 84 46 2 26 107 11 94 2.00e-13 65.9
MsaG005549 MtrunA17_Chr1g0193871 42.857 84 46 2 26 107 11 94 2.00e-13 65.9
MsaG005549 MtrunA17_Chr1g0193881 42.857 84 46 2 26 107 11 94 2.00e-13 65.9
MsaG005549 MtrunA17_Chr5g0395231 31.933 119 71 2 102 216 15 127 7.35e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG005549 AT1G68320.1 62.559 211 57 2 23 215 16 222 6.12e-86 260
MsaG005549 AT1G25340.1 64.021 189 59 2 9 188 1 189 7.49e-82 249
MsaG005549 AT1G25340.2 71.242 153 39 1 9 161 1 148 2.31e-76 235
MsaG005549 AT1G25340.3 61.905 189 58 3 9 188 1 184 5.80e-76 235
MsaG005549 AT1G48000.1 69.065 139 43 0 25 163 31 169 3.95e-70 218
MsaG005549 AT5G49620.1 65.190 158 55 0 15 172 15 172 1.71e-66 211
MsaG005549 AT2G47190.1 60.000 145 58 0 21 165 15 159 8.72e-66 208
MsaG005549 AT3G27810.1 73.504 117 31 0 23 139 17 133 1.50e-64 203
MsaG005549 AT5G40350.1 57.303 178 68 4 25 194 16 193 2.19e-64 202
MsaG005549 AT3G06490.1 68.085 141 45 0 19 159 12 152 7.22e-63 202
MsaG005549 AT5G49620.2 59.884 172 55 1 15 172 15 186 1.05e-62 202
MsaG005549 AT3G01530.1 62.308 130 42 1 9 131 1 130 5.03e-57 183
MsaG005549 AT3G30210.1 53.179 173 61 4 26 186 27 191 8.54e-54 177
MsaG005549 AT4G13480.1 69.725 109 33 0 23 131 3 111 2.31e-52 173
MsaG005549 AT3G24310.1 68.807 109 34 0 23 131 15 123 4.66e-52 172
MsaG005549 AT5G59780.3 63.636 110 40 0 23 132 5 114 2.80e-49 164
MsaG005549 AT3G46130.1 65.094 106 37 0 27 132 10 115 1.74e-48 163
MsaG005549 AT3G02940.2 59.167 120 49 0 22 141 8 127 1.24e-46 160
MsaG005549 AT5G16770.4 39.850 266 134 10 22 274 8 260 2.59e-46 159
MsaG005549 AT5G16770.3 39.850 266 134 10 22 274 8 260 2.59e-46 159
MsaG005549 AT3G02940.1 59.167 120 49 0 22 141 8 127 2.78e-46 159
MsaG005549 AT3G02940.3 59.167 120 49 0 22 141 8 127 2.78e-46 159
MsaG005549 AT5G16770.1 39.850 266 134 10 22 274 8 260 6.88e-46 159
MsaG005549 AT5G16770.2 39.850 266 134 10 22 274 8 260 6.88e-46 159
MsaG005549 AT1G22640.1 56.098 123 54 0 22 144 8 130 7.53e-45 154
MsaG005549 AT3G13540.1 55.833 120 53 0 26 145 23 142 2.78e-44 152
MsaG005549 AT5G14750.1 55.932 118 50 1 14 129 2 119 3.97e-44 150
MsaG005549 AT5G54230.1 59.459 111 45 0 26 136 12 122 6.37e-44 153
MsaG005549 AT3G27810.2 75.309 81 20 0 59 139 4 84 6.59e-44 149
MsaG005549 AT1G06180.1 44.944 178 93 3 26 203 12 184 1.12e-43 150
MsaG005549 AT4G21440.1 57.391 115 49 0 22 136 8 122 1.33e-43 153
MsaG005549 AT5G40350.2 53.472 144 59 4 59 194 5 148 1.67e-43 147
MsaG005549 AT4G34990.1 56.349 126 55 0 22 147 8 133 2.04e-43 150
MsaG005549 AT5G40330.1 57.407 108 46 0 22 129 8 115 2.61e-43 148
MsaG005549 AT2G31180.1 62.037 108 41 0 22 129 8 115 3.04e-43 149
MsaG005549 AT4G05100.1 57.265 117 50 0 20 136 7 123 4.73e-43 151
MsaG005549 AT1G34670.1 59.130 115 47 0 22 136 8 122 5.97e-43 152
MsaG005549 AT1G09540.1 51.969 127 61 0 23 149 9 135 7.37e-43 151
MsaG005549 AT3G53200.1 58.772 114 47 0 21 134 4 117 9.59e-43 147
MsaG005549 AT3G13890.2 57.944 107 45 0 23 129 9 115 9.95e-43 151
MsaG005549 AT5G10280.1 53.333 120 56 0 22 141 8 127 1.36e-42 150
MsaG005549 AT5G65230.1 56.410 117 51 0 20 136 6 122 1.41e-42 149
MsaG005549 AT2G16720.1 53.968 126 58 0 22 147 8 133 1.62e-42 148
MsaG005549 AT4G09460.1 54.762 126 57 0 22 147 8 133 2.96e-42 146
MsaG005549 AT2G47460.1 61.111 108 42 0 22 129 8 115 2.99e-42 150
MsaG005549 AT4G28110.1 56.522 115 50 0 22 136 8 122 3.35e-42 147
MsaG005549 AT3G23250.1 61.111 108 42 0 22 129 8 115 3.57e-42 147
MsaG005549 AT3G11440.2 55.660 106 47 0 26 131 41 146 3.58e-42 152
MsaG005549 AT3G01140.2 59.459 111 45 0 26 136 12 122 3.69e-42 149
MsaG005549 AT2G32460.2 55.660 106 47 0 26 131 6 111 3.72e-42 152
MsaG005549 AT4G38620.1 56.557 122 53 0 22 143 8 129 4.01e-42 147
MsaG005549 AT2G32460.1 55.660 106 47 0 26 131 18 123 4.09e-42 152
MsaG005549 AT1G35515.1 57.391 115 49 0 22 136 8 122 5.23e-42 145
MsaG005549 AT3G27920.1 54.054 111 51 0 19 129 7 117 6.21e-42 145
MsaG005549 AT5G60890.1 52.419 124 59 0 22 145 8 131 7.08e-42 147
MsaG005549 AT5G07690.1 62.136 103 39 0 26 128 12 114 7.79e-42 148
MsaG005549 AT3G01140.1 59.459 111 45 0 26 136 55 165 8.56e-42 149
MsaG005549 AT1G18570.1 54.839 124 56 0 20 143 7 130 1.10e-41 148
MsaG005549 AT5G61420.2 57.658 111 47 0 26 136 12 122 1.16e-41 148
MsaG005549 AT5G06100.1 56.604 106 46 0 26 131 32 137 1.19e-41 150
MsaG005549 AT5G14340.1 54.310 116 53 0 26 141 24 139 1.26e-41 145
MsaG005549 AT4G22680.1 44.785 163 74 2 26 188 12 158 1.32e-41 145
MsaG005549 AT1G66230.1 52.459 122 58 0 26 147 12 133 1.33e-41 146
MsaG005549 AT5G26660.1 53.782 119 55 0 23 141 9 127 1.61e-41 147
MsaG005549 AT5G15310.2 58.559 111 46 0 26 136 12 122 1.73e-41 146
MsaG005549 AT3G11440.3 55.660 106 47 0 26 131 41 146 1.80e-41 151
MsaG005549 AT3G11440.4 55.660 106 47 0 26 131 41 146 1.80e-41 151
MsaG005549 AT3G11440.1 55.660 106 47 0 26 131 41 146 1.80e-41 151
MsaG005549 AT5G15310.1 58.559 111 46 0 26 136 12 122 1.83e-41 147
MsaG005549 AT1G63910.1 56.364 110 48 0 23 132 9 118 2.10e-41 147
MsaG005549 AT5G16600.1 56.757 111 48 0 26 136 12 122 3.11e-41 146
MsaG005549 AT5G15310.4 58.559 111 46 0 26 136 12 122 3.64e-41 144
MsaG005549 AT5G07700.1 60.577 104 41 0 26 129 12 115 4.26e-41 146
MsaG005549 AT5G07700.2 60.577 104 41 0 26 129 12 115 4.26e-41 146
MsaG005549 AT5G06100.5 55.556 108 48 0 24 131 30 137 4.78e-41 150
MsaG005549 AT5G06100.2 55.556 108 48 0 24 131 30 137 4.78e-41 150
MsaG005549 AT5G06100.3 55.556 108 48 0 24 131 30 137 4.78e-41 150
MsaG005549 AT5G06100.4 55.556 108 48 0 24 131 30 137 4.78e-41 150
MsaG005549 AT1G57560.1 51.613 124 60 0 23 146 9 132 4.87e-41 145
MsaG005549 AT1G57560.2 55.263 114 51 0 23 136 9 122 6.41e-41 144
MsaG005549 AT4G12350.1 44.379 169 84 3 26 193 12 171 7.43e-41 144
MsaG005549 AT5G49330.1 58.407 113 47 0 26 138 12 124 1.25e-40 145
MsaG005549 AT5G12870.1 55.046 109 49 0 25 133 17 125 1.91e-40 143
MsaG005549 AT3G62610.1 59.259 108 44 0 22 129 8 115 4.19e-40 144
MsaG005549 AT4G26930.1 50.833 120 54 1 18 132 6 125 5.08e-40 144
MsaG005549 AT3G61250.1 54.955 111 50 0 26 136 12 122 5.90e-40 142
MsaG005549 AT3G13890.1 53.448 116 45 1 23 129 9 124 8.39e-40 143
MsaG005549 AT4G17785.2 54.783 115 52 0 22 136 9 123 1.00e-39 143
MsaG005549 AT4G17785.1 54.783 115 52 0 22 136 9 123 1.12e-39 143
MsaG005549 AT3G08500.1 54.386 114 52 0 18 131 22 135 1.57e-39 142
MsaG005549 AT4G01680.3 49.600 125 63 0 23 147 9 133 1.59e-39 139
MsaG005549 AT4G01680.1 49.600 125 63 0 23 147 9 133 1.95e-39 142
MsaG005549 AT5G35550.1 57.391 115 49 0 15 129 3 117 2.85e-39 139
MsaG005549 AT5G52600.1 55.556 117 48 1 13 129 3 115 2.86e-39 137
MsaG005549 AT1G79180.1 54.955 111 50 0 22 132 10 120 2.93e-39 140
MsaG005549 AT5G55020.1 54.206 107 49 0 26 132 26 132 5.11e-39 144
MsaG005549 AT1G16490.1 52.033 123 55 2 22 140 10 132 5.69e-39 139
MsaG005549 AT1G56160.1 55.556 108 48 0 22 129 10 117 9.91e-39 139
MsaG005549 AT1G74080.1 59.223 103 42 0 26 128 12 114 1.03e-38 140
MsaG005549 AT2G26960.1 53.846 104 48 0 28 131 22 125 1.98e-38 141
MsaG005549 AT3G47600.1 53.211 109 51 0 26 134 12 120 2.88e-38 139
MsaG005549 AT1G74430.1 54.955 111 50 0 26 136 12 122 3.32e-38 137
MsaG005549 AT5G62320.1 48.120 133 62 1 22 147 9 141 3.38e-38 136
MsaG005549 AT3G12720.1 49.533 107 54 0 23 129 19 125 1.27e-37 136
MsaG005549 AT5G56110.1 52.174 115 55 0 22 136 8 122 1.66e-37 136
MsaG005549 AT1G74650.1 50.427 117 58 0 22 138 8 124 2.24e-37 136
MsaG005549 AT1G08810.1 53.846 104 48 0 26 129 12 115 1.51e-36 132
MsaG005549 AT3G28910.1 51.786 112 54 0 26 137 12 123 2.33e-36 133
MsaG005549 AT3G46130.3 72.368 76 21 0 57 132 8 83 4.02e-36 130
MsaG005549 AT4G01680.2 45.255 137 63 1 23 147 9 145 5.34e-36 133
MsaG005549 AT3G28470.1 52.427 103 49 0 22 124 8 110 6.54e-36 132
MsaG005549 AT4G37780.1 54.286 105 47 1 26 129 12 116 9.05e-36 131
MsaG005549 AT5G59780.2 74.324 74 19 0 59 132 20 93 1.12e-35 128
MsaG005549 AT3G46130.4 74.324 74 19 0 59 132 20 93 1.34e-35 129
MsaG005549 AT5G23000.1 53.211 109 50 1 22 129 8 116 2.20e-35 131
MsaG005549 AT3G12820.1 52.778 108 51 0 22 129 10 117 2.30e-35 128
MsaG005549 AT1G66370.1 57.692 104 44 0 26 129 8 111 1.79e-34 126
MsaG005549 AT1G18710.1 51.351 111 54 0 26 136 12 122 6.28e-34 125
MsaG005549 AT3G48920.1 50.000 108 54 0 21 128 13 120 7.46e-34 125
MsaG005549 AT2G36890.2 50.000 120 57 2 13 129 38 157 2.14e-33 125
MsaG005549 AT2G36890.1 54.286 105 47 1 26 129 12 116 2.97e-33 124
MsaG005549 AT5G57620.1 54.286 105 47 1 26 129 12 116 3.66e-33 125
MsaG005549 AT3G49690.1 54.286 105 47 1 26 129 12 116 4.44e-33 124
MsaG005549 AT5G62470.2 34.601 263 135 6 26 252 12 273 6.58e-33 125
MsaG005549 AT1G79180.2 42.361 144 50 1 22 132 10 153 8.28e-33 124
MsaG005549 AT3G60460.1 44.737 114 62 1 22 134 7 120 1.01e-32 123
MsaG005549 AT5G52260.1 53.398 103 48 0 27 129 13 115 1.31e-32 122
MsaG005549 AT4G25560.1 51.456 103 50 0 27 129 11 113 2.07e-32 122
MsaG005549 AT5G65790.1 53.333 105 48 1 26 129 12 116 2.68e-32 124
MsaG005549 AT1G56650.1 53.719 121 56 0 26 146 8 128 3.52e-32 120
MsaG005549 AT1G66380.1 58.654 104 43 0 26 129 8 111 4.14e-32 117
MsaG005549 AT1G66390.1 59.615 104 42 0 26 129 8 111 2.23e-31 118
MsaG005549 AT5G62470.1 34.601 263 134 7 26 252 12 272 6.00e-31 119
MsaG005549 AT3G53200.2 63.158 76 28 0 59 134 9 84 5.23e-30 113
MsaG005549 AT5G26660.2 56.627 83 36 0 59 141 14 96 2.39e-28 112
MsaG005549 AT5G11050.1 31.855 248 129 7 28 253 105 334 2.36e-27 111
MsaG005549 AT2G26950.1 43.750 112 54 1 14 125 13 115 4.11e-27 109
MsaG005549 AT5G35550.2 62.338 77 29 0 53 129 44 120 1.09e-26 106
MsaG005549 AT5G14750.3 56.098 82 31 1 53 129 4 85 1.10e-26 103
MsaG005549 AT3G27785.1 45.098 102 55 1 28 129 189 289 7.97e-26 107
MsaG005549 AT3G47600.2 57.895 76 32 0 59 134 39 114 1.10e-25 105
MsaG005549 AT2G23290.1 40.708 113 66 1 18 130 3 114 1.61e-25 104
MsaG005549 AT5G11510.3 42.857 105 59 1 25 129 78 181 2.59e-25 107
MsaG005549 AT5G11510.1 42.857 105 59 1 25 129 78 181 2.59e-25 107
MsaG005549 AT5G11510.4 42.857 105 59 1 25 129 78 181 2.59e-25 107
MsaG005549 AT3G09370.1 30.213 235 129 7 25 236 127 349 2.84e-25 105
MsaG005549 AT3G09370.1 33.884 121 78 2 3 122 53 172 7.52e-11 63.2
MsaG005549 AT3G09370.2 30.213 235 129 7 25 236 132 354 2.85e-25 105
MsaG005549 AT3G09370.2 33.884 121 78 2 3 122 58 177 7.04e-11 63.5
MsaG005549 AT5G11510.2 42.857 105 59 1 25 129 78 181 3.09e-25 106
MsaG005549 AT3G09370.3 30.544 239 123 9 25 236 140 362 3.21e-25 105
MsaG005549 AT3G09370.3 33.884 121 78 2 3 122 66 185 5.17e-11 63.9
MsaG005549 AT5G11510.5 42.857 105 59 1 25 129 78 181 3.47e-25 106
MsaG005549 AT5G02320.1 42.857 105 59 1 25 129 124 227 6.28e-25 105
MsaG005549 AT5G02320.2 42.857 105 59 1 25 129 124 227 6.28e-25 105
MsaG005549 AT3G12820.2 61.765 68 26 0 62 129 2 69 6.75e-25 99.8
MsaG005549 AT5G58850.1 43.269 104 58 1 26 129 103 205 7.13e-25 104
MsaG005549 AT5G02320.3 42.857 105 59 1 25 129 64 167 1.02e-24 104
MsaG005549 AT4G18770.1 39.655 116 69 1 26 141 215 329 2.33e-24 102
MsaG005549 AT4G37260.1 40.000 115 65 2 28 142 13 123 1.66e-23 99.0
MsaG005549 AT3G09230.1 42.241 116 62 2 28 139 55 169 2.33e-23 99.8
MsaG005549 AT1G69560.2 38.525 122 73 2 11 132 107 226 4.30e-23 98.2
MsaG005549 AT1G69560.1 38.525 122 73 2 11 132 91 210 4.97e-23 97.8
MsaG005549 AT3G55730.1 40.566 106 62 1 28 133 56 160 7.82e-23 98.2
MsaG005549 AT4G32730.5 39.048 105 63 1 25 129 84 187 1.38e-22 99.0
MsaG005549 AT4G32730.5 33.000 100 65 2 28 126 35 133 1.21e-11 66.2
MsaG005549 AT4G32730.4 39.048 105 63 1 25 129 84 187 1.38e-22 99.0
MsaG005549 AT4G32730.4 33.000 100 65 2 28 126 35 133 1.21e-11 66.2
MsaG005549 AT4G32730.3 39.048 105 63 1 25 129 84 187 1.38e-22 99.0
MsaG005549 AT4G32730.3 33.000 100 65 2 28 126 35 133 1.21e-11 66.2
MsaG005549 AT4G32730.2 39.048 105 63 1 25 129 84 187 1.38e-22 99.0
MsaG005549 AT4G32730.2 33.000 100 65 2 28 126 35 133 1.21e-11 66.2
MsaG005549 AT4G32730.1 39.048 105 63 1 25 129 84 187 1.71e-22 98.6
MsaG005549 AT4G32730.1 33.000 100 65 2 28 126 35 133 1.31e-11 65.9
MsaG005549 AT5G17800.1 38.298 141 65 4 13 132 63 202 5.01e-22 94.7
MsaG005549 AT3G29020.1 40.952 105 61 1 28 132 65 168 5.30e-22 92.8
MsaG005549 AT3G50060.1 38.835 103 62 1 28 130 6 107 6.70e-22 94.0
MsaG005549 AT3G29020.2 40.952 105 61 1 28 132 67 170 1.13e-21 93.6
MsaG005549 AT2G37630.1 42.991 107 59 1 28 132 4 110 1.69e-21 94.0
MsaG005549 AT5G67300.1 38.835 103 62 1 28 130 6 107 2.10e-21 92.8
MsaG005549 AT1G17950.1 42.857 105 59 1 28 132 5 108 2.19e-21 91.7
MsaG005549 AT2G39880.1 41.176 102 59 1 28 129 50 150 2.52e-21 93.6
MsaG005549 AT5G40360.1 38.462 104 63 1 19 122 149 251 2.82e-21 93.2
MsaG005549 AT1G22640.3 54.795 73 33 0 72 144 1 73 3.55e-21 89.7
MsaG005549 AT1G26780.2 40.187 107 63 1 26 132 96 201 4.22e-21 92.8
MsaG005549 AT1G26780.1 40.187 107 63 1 26 132 96 201 5.98e-21 91.3
MsaG005549 AT1G73410.1 45.283 106 55 2 28 132 6 109 8.50e-21 89.7
MsaG005549 AT1G14350.2 33.898 177 96 8 31 195 28 195 1.95e-20 91.7
MsaG005549 AT1G14350.1 33.898 177 96 8 31 195 28 195 1.95e-20 91.7
MsaG005549 AT1G73410.2 45.283 106 55 2 28 132 6 109 1.98e-20 87.8
MsaG005549 AT5G59780.1 73.469 49 13 0 84 132 1 49 2.21e-20 87.0
MsaG005549 AT1G66380.2 57.692 78 33 0 26 103 8 85 2.85e-20 84.7
MsaG005549 AT3G46130.2 73.469 49 13 0 84 132 1 49 2.96e-20 87.0
MsaG005549 AT4G33450.1 39.252 107 64 1 26 132 17 122 6.06e-20 87.8
MsaG005549 AT1G66380.3 61.111 72 28 0 58 129 7 78 2.25e-19 82.4
MsaG005549 AT3G23250.2 63.793 58 21 0 72 129 1 58 2.58e-19 85.5
MsaG005549 AT2G25230.1 43.000 100 53 2 31 127 29 127 9.84e-19 84.0
MsaG005549 AT5G14750.4 58.621 58 24 0 72 129 1 58 1.52e-18 81.3
MsaG005549 AT5G14750.2 58.621 58 24 0 72 129 1 58 1.52e-18 81.3
MsaG005549 AT1G18960.1 34.211 114 72 2 28 141 10 120 1.97e-18 84.3
MsaG005549 AT2G02820.3 40.196 102 60 1 31 132 33 133 3.53e-18 84.3
MsaG005549 AT2G02820.1 40.196 102 60 1 31 132 33 133 4.32e-18 84.7
MsaG005549 AT2G02820.2 40.196 102 60 1 31 132 33 133 4.69e-18 85.1
MsaG005549 AT1G71030.1 40.860 93 54 1 50 142 5 96 4.80e-18 81.3
MsaG005549 AT1G71030.2 44.872 78 43 0 65 142 5 82 8.24e-18 80.1
MsaG005549 AT4G00540.2 38.739 111 64 2 26 133 101 210 1.51e-17 83.2
MsaG005549 AT4G00540.1 38.739 111 64 2 26 133 99 208 2.63e-17 82.4
MsaG005549 AT5G39700.1 38.679 106 64 1 27 132 55 159 6.12e-17 78.2
MsaG005549 AT5G40430.1 35.433 127 74 5 14 134 38 162 4.59e-15 74.3
MsaG005549 AT3G18100.1 33.065 124 76 2 27 144 545 667 1.11e-13 72.4
MsaG005549 AT3G18100.3 33.065 124 76 2 27 144 497 619 1.53e-13 71.6
MsaG005549 AT3G18100.4 33.065 124 76 2 27 144 384 506 2.27e-13 71.2
MsaG005549 AT3G18100.2 33.065 124 76 2 27 144 332 454 2.42e-13 70.9
MsaG005549 AT1G14350.3 33.333 138 72 7 70 195 23 152 8.26e-13 68.9
MsaG005549 AT1G14350.4 33.333 138 72 7 70 195 23 152 8.26e-13 68.9
MsaG005549 AT4G25560.2 54.348 46 21 0 84 129 2 47 2.74e-11 62.8

Find 63 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCACAAATATGAATAATTT+TGG 0.138581 1:-82705900 MsaT005549.1:CDS
ACCTTCCAAGCCATAGTTAT+TGG 0.185410 1:+82705605 None:intergenic
TTTCAAGTGGCTGTGAAAAT+TGG 0.228230 1:+82705715 None:intergenic
TGACATAGTACTTAAATTAT+TGG 0.248289 1:+82705770 None:intergenic
CAGCTTCAATAATCCTTCTT+TGG 0.273207 1:-82705745 MsaT005549.1:CDS
AGAATGTATACCTGCACTTT+TGG 0.289850 1:+82706751 None:intergenic
ATCTCATTATCTGTTCTTCC+TGG 0.311501 1:+82706080 None:intergenic
ACATTGTTCTCAAACACATT+TGG 0.382149 1:+82705669 None:intergenic
ATAATGAGATAAAGAACTAT+TGG 0.389787 1:-82706067 MsaT005549.1:CDS
ATAATTGTTCTTGTGGTGTA+AGG 0.395767 1:+82706558 None:intergenic
TTCATTCCAAGTGGGGCAAC+AGG 0.399872 1:-82706523 MsaT005549.1:intron
ACAACTACAAAGAAAGAGTT+TGG 0.401219 1:-82706884 MsaT005549.1:CDS
CGCCAACTTAACATTGAATC+TGG 0.420856 1:-82706020 MsaT005549.1:CDS
ATTGATGATACCAATAACTA+TGG 0.431411 1:-82705615 MsaT005549.1:CDS
CCTTGATCCAATGTCTTCAA+TGG 0.434110 1:-82705577 MsaT005549.1:CDS
AGGTTCCCTCTCTTAATGTC+AGG 0.434595 1:+82706578 None:intergenic
ATGCAGAAATTGTCTTGGAT+TGG 0.440218 1:+82705636 None:intergenic
TTTGAGAACAATGTTTATAA+CGG 0.461212 1:-82705660 MsaT005549.1:CDS
CCATTGAAGACATTGGATCA+AGG 0.464340 1:+82705577 None:intergenic
AAACTCTTTCTTTGTAGTTG+TGG 0.466467 1:+82706886 None:intergenic
GCCAAGATTGCTTCAAAAGA+TGG 0.466885 1:-82705958 MsaT005549.1:CDS
TACCAGATTCAATGTTAAGT+TGG 0.469384 1:+82706018 None:intergenic
CATCAATGCAGAAATTGTCT+TGG 0.474689 1:+82705631 None:intergenic
TAAGTTTCCATTGAAGACAT+TGG 0.474756 1:+82705570 None:intergenic
CCCACTTGGAATGAAGTTCA+AGG 0.476186 1:+82706531 None:intergenic
TTAATACCTGTTGCCCCACT+TGG 0.480636 1:+82706517 None:intergenic
TAATAGTACTTTGTGGAACA+TGG 0.484889 1:-82705487 MsaT005549.1:CDS
TTCAAACTACAGAAAGTGGT+TGG 0.497556 1:-82705527 MsaT005549.1:CDS
AGGATCAATAATTGTTCTTG+TGG 0.497994 1:+82706551 None:intergenic
CTCGTCATGGTGAAGGTCGT+TGG 0.503722 1:-82706784 MsaT005549.1:CDS
ACCAATAACTATGGCTTGGA+AGG 0.505112 1:-82705606 MsaT005549.1:CDS
TTGTGATAGAAGAGTGATCA+AGG 0.509514 1:+82705916 None:intergenic
GAGTGATCAAGGCTTGGAGA+AGG 0.512629 1:+82705927 None:intergenic
CAAAGAAGGATTATTGAAGC+TGG 0.514926 1:+82705746 None:intergenic
TTGAAACCTGACATTAAGAG+AGG 0.515821 1:-82706584 MsaT005549.1:CDS
CCTCTCTGTGGATAGGATGA+AGG 0.522354 1:+82705813 None:intergenic
AAAATTGCTCAGCATTTACC+AGG 0.522850 1:-82706098 MsaT005549.1:CDS
TAGGATGAAGGAGACAGAGA+AGG 0.526269 1:+82705825 None:intergenic
ATTTCAGGATTGAAGAGGAC+CGG 0.528553 1:-82706638 MsaT005549.1:intron
TGATACCAATAACTATGGCT+TGG 0.540717 1:-82705610 MsaT005549.1:CDS
CCAACATTTCAGGATTGAAG+AGG 0.541450 1:-82706643 MsaT005549.1:intron
TGGTTGGATGTTAGACAACA+TGG 0.544269 1:-82705511 MsaT005549.1:CDS
ATGAGCTGAGAAGAGGACCT+TGG 0.544610 1:-82706844 MsaT005549.1:CDS
TATGAATCCTCTCTGTGGAT+AGG 0.547305 1:+82705806 None:intergenic
ACATGGGTAATAGTACTTTG+TGG 0.553914 1:-82705494 MsaT005549.1:CDS
ATAGAAGAGTGATCAAGGCT+TGG 0.556499 1:+82705921 None:intergenic
CTATCTTCTTCAAGAGTCCA+AGG 0.562500 1:+82706827 None:intergenic
AATTGGAAGAAATCCAAAGA+AGG 0.563837 1:+82705732 None:intergenic
TAAAGAACTATTGGAGAACA+AGG 0.573257 1:-82706058 MsaT005549.1:CDS
GAAGAAAATGAGCTGAGAAG+AGG 0.586355 1:-82706851 MsaT005549.1:CDS
TATATTGCTCGTCATGGTGA+AGG 0.594084 1:-82706791 MsaT005549.1:CDS
CCTTGAACTTCATTCCAAGT+GGG 0.599773 1:-82706531 MsaT005549.1:CDS
TCCTTGAACTTCATTCCAAG+TGG 0.606906 1:-82706532 MsaT005549.1:CDS
AATATGTTAGCCAAAAGTGC+AGG 0.609544 1:-82706761 MsaT005549.1:intron
AGTGATCAAGGCTTGGAGAA+GGG 0.610012 1:+82705928 None:intergenic
GGACATAGCTAATGCTCTAG+TGG 0.613720 1:+82706907 None:intergenic
CTTGAACTTCATTCCAAGTG+GGG 0.620188 1:-82706530 MsaT005549.1:CDS
TGAAACCTGACATTAAGAGA+GGG 0.622809 1:-82706583 MsaT005549.1:CDS
ATACACTATATTGCTCGTCA+TGG 0.635211 1:-82706797 MsaT005549.1:CDS
GCATCTATGAATCCTCTCTG+TGG 0.672798 1:+82705801 None:intergenic
GGTTGGATGTTAGACAACAT+GGG 0.675162 1:-82705510 MsaT005549.1:CDS
AAAGAACTATTGGAGAACAA+GGG 0.692289 1:-82706057 MsaT005549.1:CDS
CCTTCATCCTATCCACAGAG+AGG 0.705324 1:-82705813 MsaT005549.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 82705476 82706936 82705476 ID=MsaG005549
Chr1 mRNA 82705476 82706936 82705476 ID=MsaT005549.1;Parent=MsaG005549
Chr1 exon 82705476 82706127 82705476 ID=MsaT005549.1.exon3;Parent=MsaT005549.1
Chr1 CDS 82705476 82706127 82705476 ID=cds.MsaT005549.1;Parent=MsaT005549.1
Chr1 exon 82706524 82706653 82706524 ID=MsaT005549.1.exon2;Parent=MsaT005549.1
Chr1 CDS 82706524 82706653 82706524 ID=cds.MsaT005549.1;Parent=MsaT005549.1
Chr1 exon 82706762 82706936 82706762 ID=MsaT005549.1.exon1;Parent=MsaT005549.1
Chr1 CDS 82706762 82706936 82706762 ID=cds.MsaT005549.1;Parent=MsaT005549.1
Gene Sequence

>MsaT005549.1

ATGAACACCACTAGAGCATTAGCTATGTCCACAACTACAAAGAAAGAGTTTGGTAATTCTAAAGAAGAAAATGAGCTGAGAAGAGGACCTTGGACTCTTGAAGAAGATAGCTTACTAATACACTATATTGCTCGTCATGGTGAAGGTCGTTGGAATATGTTAGCCAAAAGTGCAGGATTGAAGAGGACCGGAAAAAGCTGCAGACTCAGATGGTTGAATTACTTGAAACCTGACATTAAGAGAGGGAACCTTACACCACAAGAACAATTATTGATCCTTGAACTTCATTCCAAGTGGGGCAACAGGTGGTCAAAAATTGCTCAGCATTTACCAGGAAGAACAGATAATGAGATAAAGAACTATTGGAGAACAAGGGTGCAAAAACAAGCACGCCAACTTAACATTGAATCTGGTAGCAAGAGATTCATTGATGCTGTTAAGTGTTTTTGGATGCCAAGATTGCTTCAAAAGATGGAACAGAACCCTTCTCCAAGCCTTGATCACTCTTCTATCACAAATATGAATAATTTTGGTAACTCTATTGAAGCTTCAACTAGTAATTCAATGTCAACAAGCTTCAATATTCCTTCTCTGTCTCCTTCATCCTATCCACAGAGAGGATTCATAGATGCTTCAAGTGCCAATAATTTAAGTACTATGTCAGCCAGCTTCAATAATCCTTCTTTGGATTTCTTCCAATTTTCACAGCCACTTGAAATTTCAGAAAACTCAAAAAGTGCTCCAAATGTGTTTGAGAACAATGTTTATAACGGTCCAATCCAAGACAATTTCTGCATTGATGATACCAATAACTATGGCTTGGAAGGTCTAAACCTTGATCCAATGTCTTCAATGGAAACTTATGACTTTTCACAGTTTGATTTTCAAACTACAGAAAGTGGTTGGATGTTAGACAACATGGGTAATAGTACTTTGTGGAACATGGATTCTATGTGA
Protein sequence

>MsaT005549.1

MNTTRALAMSTTTKKEFGNSKEENELRRGPWTLEEDSLLIHYIARHGEGRWNMLAKSAGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQLNIESGSKRFIDAVKCFWMPRLLQKMEQNPSPSLDHSSITNMNNFGNSIEASTSNSMSTSFNIPSLSPSSYPQRGFIDASSANNLSTMSASFNNPSLDFFQFSQPLEISENSKSAPNVFENNVYNGPIQDNFCIDDTNNYGLEGLNLDPMSSMETYDFSQFDFQTTESGWMLDNMGNSTLWNMDSM*