Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG005858 | XP_013470448.1 | 97.813 | 503 | 9 | 2 | 1 | 503 | 1 | 501 | 0.0 | 983 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG005858 | sp|Q9ZT96|MTEF4_ARATH | 53.435 | 393 | 183 | 0 | 74 | 466 | 112 | 504 | 9.16e-152 | 447 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG005858 | tr|A0A072VS35|A0A072VS35_MEDTR | 97.813 | 503 | 9 | 2 | 1 | 503 | 1 | 501 | 0.0 | 983 |
| Gene ID | Type | Classification |
|---|---|---|
| MsaG005858 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG005858 | MtrunA17_Chr1g0212691 | 97.813 | 503 | 9 | 2 | 1 | 503 | 1 | 501 | 0.0 | 983 |
| MsaG005858 | MtrunA17_Chr8g0391881 | 86.869 | 396 | 19 | 3 | 34 | 429 | 12 | 374 | 0.0 | 670 |
| MsaG005858 | MtrunA17_Chr5g0428941 | 51.435 | 418 | 197 | 2 | 55 | 470 | 89 | 502 | 2.86e-151 | 442 |
| MsaG005858 | MtrunA17_Chr8g0391861 | 86.607 | 112 | 13 | 1 | 392 | 503 | 1 | 110 | 7.05e-53 | 175 |
| MsaG005858 | MtrunA17_Chr4g0034981 | 25.706 | 354 | 253 | 4 | 106 | 452 | 235 | 585 | 3.07e-35 | 139 |
| MsaG005858 | MtrunA17_Chr8g0391871 | 88.333 | 60 | 7 | 0 | 444 | 503 | 1 | 60 | 3.71e-29 | 109 |
| MsaG005858 | MtrunA17_Chr2g0294671 | 29.123 | 285 | 190 | 6 | 177 | 457 | 211 | 487 | 1.66e-28 | 118 |
| MsaG005858 | MtrunA17_Chr2g0294671 | 22.348 | 264 | 179 | 5 | 69 | 328 | 189 | 430 | 1.92e-12 | 69.3 |
| MsaG005858 | MtrunA17_Chr6g0448821 | 27.164 | 335 | 238 | 6 | 126 | 458 | 32 | 362 | 6.60e-28 | 114 |
| MsaG005858 | MtrunA17_Chr4g0043941 | 22.115 | 312 | 199 | 5 | 147 | 453 | 47 | 319 | 2.92e-25 | 106 |
| MsaG005858 | MtrunA17_Chr4g0043941 | 25.108 | 231 | 147 | 3 | 84 | 313 | 45 | 250 | 3.57e-17 | 82.8 |
| MsaG005858 | MtrunA17_Chr5g0445491 | 24.373 | 279 | 200 | 7 | 163 | 434 | 176 | 450 | 2.70e-19 | 90.9 |
| MsaG005858 | MtrunA17_Chr5g0445491 | 23.881 | 268 | 188 | 7 | 83 | 338 | 194 | 457 | 1.43e-15 | 79.3 |
| MsaG005858 | MtrunA17_Chr2g0304101 | 26.923 | 208 | 116 | 3 | 283 | 454 | 99 | 306 | 4.12e-16 | 79.3 |
| MsaG005858 | MtrunA17_Chr5g0417641 | 26.639 | 244 | 139 | 5 | 212 | 453 | 88 | 293 | 1.14e-14 | 74.7 |
| MsaG005858 | MtrunA17_Chr2g0311181 | 23.582 | 335 | 164 | 12 | 147 | 475 | 75 | 323 | 1.15e-14 | 75.1 |
| MsaG005858 | MtrunA17_Chr3g0127891 | 22.819 | 298 | 184 | 7 | 160 | 452 | 235 | 491 | 9.59e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG005858 | AT2G44020.1 | 74.455 | 505 | 126 | 3 | 1 | 503 | 4 | 507 | 0.0 | 758 |
| MsaG005858 | AT4G02990.2 | 53.435 | 393 | 183 | 0 | 74 | 466 | 112 | 504 | 9.31e-153 | 447 |
| MsaG005858 | AT4G02990.1 | 53.435 | 393 | 183 | 0 | 74 | 466 | 112 | 504 | 9.31e-153 | 447 |
| MsaG005858 | AT2G21710.1 | 25.000 | 352 | 260 | 3 | 138 | 488 | 278 | 626 | 4.99e-39 | 150 |
| MsaG005858 | AT2G21710.1 | 26.070 | 257 | 176 | 5 | 68 | 313 | 272 | 525 | 1.31e-17 | 86.3 |
| MsaG005858 | AT1G78930.1 | 26.488 | 336 | 240 | 6 | 126 | 458 | 249 | 580 | 2.82e-31 | 127 |
| MsaG005858 | AT4G38160.4 | 25.912 | 274 | 194 | 4 | 189 | 456 | 54 | 324 | 4.52e-29 | 117 |
| MsaG005858 | AT4G38160.4 | 23.902 | 205 | 154 | 2 | 126 | 328 | 63 | 267 | 1.35e-15 | 78.6 |
| MsaG005858 | AT4G38160.1 | 25.912 | 274 | 194 | 4 | 189 | 456 | 54 | 324 | 4.52e-29 | 117 |
| MsaG005858 | AT4G38160.1 | 23.902 | 205 | 154 | 2 | 126 | 328 | 63 | 267 | 1.35e-15 | 78.6 |
| MsaG005858 | AT4G38160.2 | 25.912 | 274 | 194 | 4 | 189 | 456 | 54 | 324 | 9.45e-29 | 117 |
| MsaG005858 | AT4G38160.2 | 23.902 | 205 | 154 | 2 | 126 | 328 | 63 | 267 | 1.84e-15 | 78.6 |
| MsaG005858 | AT4G38160.3 | 25.912 | 274 | 194 | 4 | 189 | 456 | 54 | 324 | 1.22e-28 | 117 |
| MsaG005858 | AT4G38160.3 | 23.902 | 205 | 154 | 2 | 126 | 328 | 63 | 267 | 1.99e-15 | 78.6 |
| MsaG005858 | AT2G21710.2 | 23.929 | 280 | 211 | 2 | 138 | 416 | 278 | 556 | 4.79e-27 | 115 |
| MsaG005858 | AT2G21710.2 | 26.070 | 257 | 176 | 5 | 68 | 313 | 272 | 525 | 1.05e-17 | 86.7 |
| MsaG005858 | AT2G21710.3 | 23.741 | 278 | 210 | 2 | 138 | 414 | 278 | 554 | 4.29e-26 | 112 |
| MsaG005858 | AT2G21710.3 | 26.070 | 257 | 176 | 5 | 68 | 313 | 272 | 525 | 1.30e-17 | 86.3 |
| MsaG005858 | AT4G14605.2 | 25.130 | 386 | 268 | 9 | 75 | 453 | 97 | 468 | 9.71e-24 | 104 |
| MsaG005858 | AT4G14605.1 | 25.130 | 386 | 268 | 9 | 75 | 453 | 97 | 468 | 9.71e-24 | 104 |
| MsaG005858 | AT5G55580.2 | 26.484 | 219 | 154 | 4 | 219 | 432 | 119 | 335 | 1.40e-18 | 88.2 |
| MsaG005858 | AT5G55580.2 | 25.000 | 260 | 180 | 7 | 81 | 328 | 79 | 335 | 8.83e-16 | 79.7 |
| MsaG005858 | AT5G55580.2 | 23.853 | 218 | 160 | 3 | 145 | 360 | 117 | 330 | 3.91e-14 | 74.7 |
| MsaG005858 | AT5G55580.1 | 26.484 | 219 | 154 | 4 | 219 | 432 | 225 | 441 | 8.71e-18 | 86.7 |
| MsaG005858 | AT5G55580.1 | 25.000 | 260 | 180 | 7 | 81 | 328 | 185 | 441 | 1.10e-15 | 80.1 |
| MsaG005858 | AT5G55580.1 | 23.853 | 218 | 160 | 3 | 145 | 360 | 223 | 436 | 1.08e-13 | 73.9 |
| MsaG005858 | AT1G61970.2 | 24.100 | 361 | 251 | 8 | 115 | 464 | 58 | 406 | 3.85e-16 | 80.9 |
| MsaG005858 | AT1G61970.7 | 24.100 | 361 | 251 | 8 | 115 | 464 | 58 | 406 | 3.85e-16 | 80.9 |
| MsaG005858 | AT1G61970.6 | 24.100 | 361 | 251 | 8 | 115 | 464 | 58 | 406 | 3.85e-16 | 80.9 |
| MsaG005858 | AT1G61970.3 | 24.100 | 361 | 251 | 8 | 115 | 464 | 58 | 406 | 3.85e-16 | 80.9 |
| MsaG005858 | AT1G61970.5 | 24.100 | 361 | 251 | 8 | 115 | 464 | 58 | 406 | 3.85e-16 | 80.9 |
| MsaG005858 | AT1G61970.4 | 24.100 | 361 | 251 | 8 | 115 | 464 | 58 | 406 | 3.85e-16 | 80.9 |
| MsaG005858 | AT1G61970.1 | 24.100 | 361 | 251 | 8 | 115 | 464 | 58 | 406 | 3.85e-16 | 80.9 |
| MsaG005858 | AT5G54180.1 | 22.973 | 296 | 185 | 7 | 162 | 454 | 235 | 490 | 8.37e-15 | 77.4 |
| MsaG005858 | AT1G61980.3 | 24.118 | 340 | 235 | 10 | 138 | 464 | 81 | 410 | 1.07e-14 | 76.6 |
| MsaG005858 | AT1G61980.2 | 24.118 | 340 | 235 | 10 | 138 | 464 | 81 | 410 | 1.07e-14 | 76.6 |
| MsaG005858 | AT1G61980.1 | 24.118 | 340 | 235 | 10 | 138 | 464 | 81 | 410 | 1.07e-14 | 76.6 |
| MsaG005858 | AT2G34620.1 | 26.887 | 212 | 119 | 4 | 283 | 458 | 85 | 296 | 2.49e-13 | 71.2 |
| MsaG005858 | AT2G03050.1 | 29.317 | 249 | 151 | 9 | 219 | 456 | 38 | 272 | 9.14e-13 | 69.3 |
| MsaG005858 | AT2G03050.2 | 29.317 | 249 | 151 | 9 | 219 | 456 | 39 | 273 | 9.33e-13 | 69.3 |
| MsaG005858 | AT5G55580.3 | 25.000 | 172 | 127 | 2 | 145 | 314 | 223 | 394 | 2.46e-12 | 68.9 |
| MsaG005858 | AT5G55580.3 | 26.425 | 193 | 130 | 5 | 81 | 261 | 185 | 377 | 1.09e-11 | 67.0 |
| MsaG005858 | AT2G36000.2 | 23.506 | 251 | 169 | 8 | 219 | 460 | 79 | 315 | 3.15e-12 | 68.2 |
| MsaG005858 | AT2G36000.1 | 23.387 | 248 | 167 | 8 | 219 | 457 | 79 | 312 | 7.26e-12 | 67.0 |
| MsaG005858 | AT1G62110.1 | 22.139 | 402 | 222 | 10 | 141 | 464 | 58 | 446 | 6.77e-11 | 64.7 |
Find 117 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCAGTATCCTTTGATTT+TGG | 0.075546 | 1:-85975382 | MsaT005858.1:CDS |
| GTTGAGTTTATTCAGAAATT+AGG | 0.154219 | 1:-85975423 | MsaT005858.1:CDS |
| GTTGATTACTTGGTTAATTT+AGG | 0.162887 | 1:-85975003 | MsaT005858.1:CDS |
| CCTAAAATTGTTTGAAGTTT+GGG | 0.180617 | 1:+85975659 | None:intergenic |
| GCTCAGTATCCGCAGATTAT+TGG | 0.210052 | 1:-85974841 | MsaT005858.1:CDS |
| TCCTAAAATTGTTTGAAGTT+TGG | 0.211802 | 1:+85975658 | None:intergenic |
| CATCTCGTATTCGGGAAATT+TGG | 0.226817 | 1:+85975596 | None:intergenic |
| TCCTGATGAATTGCAGGATT+TGG | 0.241747 | 1:-85975481 | MsaT005858.1:CDS |
| AAAGTATAGGTCCTTCATTC+TGG | 0.247502 | 1:-85974369 | MsaT005858.1:CDS |
| TTGATTACTTGGTTAATTTA+GGG | 0.247846 | 1:-85975002 | MsaT005858.1:CDS |
| TTGTTTGAAGTTTGGGGATT+TGG | 0.270604 | 1:+85975666 | None:intergenic |
| TCACTTATAGTTTGGAATCT+AGG | 0.287748 | 1:-85974510 | MsaT005858.1:CDS |
| AGAATACTTCACTTATAGTT+TGG | 0.295127 | 1:-85974518 | MsaT005858.1:CDS |
| CTTCGATTATCTCAAGGGTT+TGG | 0.298946 | 1:-85975511 | MsaT005858.1:CDS |
| GTTGATTGTTTGATTAGTTT+TGG | 0.307251 | 1:-85974895 | MsaT005858.1:CDS |
| CTCTTAAGCCTCTGGTATCT+AGG | 0.309752 | 1:+85974481 | None:intergenic |
| TTCGATTATCTCAAGGGTTT+GGG | 0.314201 | 1:-85975510 | MsaT005858.1:CDS |
| GGATAAAGTGTTCATTGAAT+TGG | 0.316271 | 1:-85974453 | MsaT005858.1:CDS |
| ATTCGGGAAATTTGGAATCT+TGG | 0.321586 | 1:+85975604 | None:intergenic |
| AACAGTAGGCATCTCGTATT+CGG | 0.325045 | 1:+85975587 | None:intergenic |
| TGGGGATTTGGAAGTGCATT+TGG | 0.329507 | 1:+85975678 | None:intergenic |
| TTGAGTTTATTCAGAAATTA+GGG | 0.329984 | 1:-85975422 | MsaT005858.1:CDS |
| AGCTTAAACCCTAAAAGTTC+AGG | 0.348375 | 1:+85975156 | None:intergenic |
| ATGTAGAGAAAGATGATATT+GGG | 0.358260 | 1:-85975197 | MsaT005858.1:CDS |
| AATTATTCCTGATGAATTGC+AGG | 0.358521 | 1:-85975487 | MsaT005858.1:CDS |
| CCTGTTATTAAGTTTCTTAG+AGG | 0.361016 | 1:-85975225 | MsaT005858.1:CDS |
| AAACTATAAGTGAAGTATTC+TGG | 0.362016 | 1:+85974520 | None:intergenic |
| AAAGCCTCTTGTTGATTACT+TGG | 0.364443 | 1:-85975013 | MsaT005858.1:CDS |
| TCAAAATGTGATTATGAAAC+CGG | 0.364444 | 1:-85974701 | MsaT005858.1:CDS |
| CTAATCAAACAATCAACATT+AGG | 0.365413 | 1:+85974901 | None:intergenic |
| ATCTGAAACTATATCATTCC+CGG | 0.367449 | 1:+85974324 | None:intergenic |
| CCTCTAAGAAACTTAATAAC+AGG | 0.368936 | 1:+85975225 | None:intergenic |
| TTCGGGAAATTTGGAATCTT+GGG | 0.373205 | 1:+85975605 | None:intergenic |
| GTTGCTTATCTTGTTAGTAT+TGG | 0.373295 | 1:-85975111 | MsaT005858.1:CDS |
| TTAGTATTGGTGTTAATCCT+AGG | 0.373470 | 1:-85975098 | MsaT005858.1:CDS |
| GAAGTGCATTTGGATTTAAT+TGG | 0.374790 | 1:+85975688 | None:intergenic |
| GATGTAGAGAAAGATGATAT+TGG | 0.374971 | 1:-85975198 | MsaT005858.1:CDS |
| TCCCCTTGCTCTTAAGCCTC+TGG | 0.375995 | 1:+85974473 | None:intergenic |
| GAAGACAATTTCGCCTTAAG+AGG | 0.388607 | 1:+85974814 | None:intergenic |
| GATTATTGGATTGCCTCTTA+AGG | 0.391397 | 1:-85974827 | MsaT005858.1:CDS |
| GAGATTTGAAGAGAGATTGC+AGG | 0.401297 | 1:-85974410 | MsaT005858.1:CDS |
| GTCGCAGGATGTGGCTAGTA+TGG | 0.403205 | 1:-85974650 | MsaT005858.1:CDS |
| TCCTAGGGATATTGGTCCTA+TGG | 0.421118 | 1:-85975082 | MsaT005858.1:CDS |
| ACAGTAGGCATCTCGTATTC+GGG | 0.424676 | 1:+85975588 | None:intergenic |
| CTCATGACTTCAACGGTTGA+AGG | 0.424949 | 1:+85975453 | None:intergenic |
| GAGAAAAGAGCTTATTTACT+TGG | 0.425844 | 1:-85974949 | MsaT005858.1:CDS |
| ACCACCCTCGCAAACCCTTC+CGG | 0.428125 | 1:+85974754 | None:intergenic |
| GAATGAAGGACCTATACTTT+CGG | 0.432637 | 1:+85974372 | None:intergenic |
| TATTCAGAAATTAGGGTTAA+CGG | 0.433903 | 1:-85975415 | MsaT005858.1:CDS |
| GCAATCTCTCTTCAAATCTC+TGG | 0.437449 | 1:+85974413 | None:intergenic |
| TCCGGAAGGGTTTGCGAGGG+TGG | 0.445823 | 1:-85974755 | MsaT005858.1:CDS |
| GGTGTTAATCCTAGGGATAT+TGG | 0.451217 | 1:-85975090 | MsaT005858.1:CDS |
| TATAGTTTCAGATGAGGAAG+AGG | 0.454451 | 1:-85974314 | MsaT005858.1:CDS |
| TACTTCTTCAAAAGTGAGAT+GGG | 0.459036 | 1:-85974571 | MsaT005858.1:CDS |
| GGAAGGGTTTGCGAGGGTGG+TGG | 0.459551 | 1:-85974752 | MsaT005858.1:CDS |
| CGAGATGCCTACTGTTACAT+GGG | 0.462699 | 1:-85975580 | MsaT005858.1:CDS |
| TCCAAATCCTGCAATTCATC+AGG | 0.465291 | 1:+85975480 | None:intergenic |
| GCGAAACGAGTTTCTCTTTG+CGG | 0.473966 | 1:+85975544 | None:intergenic |
| ATCCTAGCTAGAATCTTCTT+AGG | 0.491214 | 1:+85974976 | None:intergenic |
| GGGATTTCTAGGTCTAAACT+TGG | 0.492563 | 1:-85975306 | MsaT005858.1:CDS |
| CTAAAATTGTTTGAAGTTTG+GGG | 0.495684 | 1:+85975660 | None:intergenic |
| GTTACATGGGGTGTCATTCA+AGG | 0.496359 | 1:-85975567 | MsaT005858.1:CDS |
| TACCAGAGGCTTAAGAGCAA+GGG | 0.502139 | 1:-85974475 | MsaT005858.1:CDS |
| CATCATCTTCGATTATCTCA+AGG | 0.503798 | 1:-85975517 | MsaT005858.1:CDS |
| GGCAATACCGTCGCAGGATG+TGG | 0.504137 | 1:-85974659 | MsaT005858.1:CDS |
| TTTGAAGCTTAAGATTGATC+CGG | 0.506836 | 1:-85974773 | MsaT005858.1:CDS |
| TTACTTCTTCAAAAGTGAGA+TGG | 0.508844 | 1:-85974572 | MsaT005858.1:CDS |
| GGTCCTTCATTCTGGATTGG+TGG | 0.510705 | 1:-85974361 | MsaT005858.1:CDS |
| GTCCTTCATTCTGGATTGGT+GGG | 0.516545 | 1:-85974360 | MsaT005858.1:CDS |
| ATAGGTCCTTCATTCTGGAT+TGG | 0.517859 | 1:-85974364 | MsaT005858.1:CDS |
| TAGTATTGGTGTTAATCCTA+GGG | 0.522188 | 1:-85975097 | MsaT005858.1:CDS |
| ACGAGATGCCTACTGTTACA+TGG | 0.523419 | 1:-85975581 | MsaT005858.1:CDS |
| ATCATCTTCGATTATCTCAA+GGG | 0.534022 | 1:-85975516 | MsaT005858.1:CDS |
| ATTGTTCTGCTAAAGAGAAA+CGG | 0.538058 | 1:+85974261 | None:intergenic |
| TATATCGAAACCGAAAGTAT+AGG | 0.540273 | 1:-85974382 | MsaT005858.1:CDS |
| GAGGAAGGAATGTTTGCCCT+CGG | 0.544202 | 1:-85974869 | MsaT005858.1:CDS |
| AGCTTAAGATTGATCCGGAA+GGG | 0.556415 | 1:-85974768 | MsaT005858.1:CDS |
| TTCCCACCAATCCAGAATGA+AGG | 0.560953 | 1:+85974358 | None:intergenic |
| AGATTTGAAGAGAGATTGCA+GGG | 0.561148 | 1:-85974409 | MsaT005858.1:CDS |
| GGGAAATTTGGAATCTTGGG+TGG | 0.563247 | 1:+85975608 | None:intergenic |
| GCAAAGAGAAACTCGTTTCG+CGG | 0.565498 | 1:-85975542 | MsaT005858.1:CDS |
| ATACCAGAGGCTTAAGAGCA+AGG | 0.565715 | 1:-85974476 | MsaT005858.1:CDS |
| CTTCAACCGTTGAAGTCATG+AGG | 0.566630 | 1:-85975452 | MsaT005858.1:CDS |
| CAAAGAGAAACTCGTTTCGC+GGG | 0.570276 | 1:-85975541 | MsaT005858.1:CDS |
| GAAGATTCTAGCTAGGATGT+TGG | 0.572863 | 1:-85974971 | MsaT005858.1:CDS |
| ACACTAGCATGCAAAACTTG+TGG | 0.577739 | 1:+85975264 | None:intergenic |
| TGGTAGGGCAATACCGTCGC+AGG | 0.580954 | 1:-85974665 | MsaT005858.1:CDS |
| GAGACCTGTAAAAGAGCTTG+TGG | 0.581965 | 1:-85974548 | MsaT005858.1:CDS |
| ACGTTCCCTCATGACTTCAA+CGG | 0.586865 | 1:+85975446 | None:intergenic |
| TAAGGATACTGTGTAACCAT+AGG | 0.587849 | 1:+85975066 | None:intergenic |
| GGTGATCAAGTGTCCTCAGT+TGG | 0.594291 | 1:-85974629 | MsaT005858.1:CDS |
| ACACTACAACCCAAAATCAA+AGG | 0.594517 | 1:+85975372 | None:intergenic |
| ACCAGAGGCTTAAGAGCAAG+GGG | 0.605082 | 1:-85974474 | MsaT005858.1:CDS |
| TTAACCAAGTAATCAACAAG+AGG | 0.605793 | 1:+85975009 | None:intergenic |
| TCTGAAACTATATCATTCCC+GGG | 0.612098 | 1:+85974325 | None:intergenic |
| TTGATCCGGAAGGGTTTGCG+AGG | 0.614047 | 1:-85974759 | MsaT005858.1:CDS |
| GTGGGAAATTAGAGCTACCC+GGG | 0.615038 | 1:-85974342 | MsaT005858.1:CDS |
| ACTCGCAGCGCAACCAACTG+AGG | 0.617167 | 1:+85974616 | None:intergenic |
| GGTGGGAAATTAGAGCTACC+CGG | 0.618425 | 1:-85974343 | MsaT005858.1:CDS |
| TGCCTAAGAAGATTCTAGCT+AGG | 0.620780 | 1:-85974978 | MsaT005858.1:CDS |
| AAGCTTAAGATTGATCCGGA+AGG | 0.621599 | 1:-85974769 | MsaT005858.1:CDS |
| GGTGGTGGAGAAGATGCCAC+AGG | 0.628330 | 1:-85974737 | MsaT005858.1:CDS |
| TTCAACCGTTGAAGTCATGA+GGG | 0.641557 | 1:-85975451 | MsaT005858.1:CDS |
| ACCATAGGACCAATATCCCT+AGG | 0.641670 | 1:+85975081 | None:intergenic |
| ACTTCTTCAAAAGTGAGATG+GGG | 0.645282 | 1:-85974570 | MsaT005858.1:CDS |
| ATGACACCCCATGTAACAGT+AGG | 0.649004 | 1:+85975573 | None:intergenic |
| TGATGAAGACTAACCACCTG+TGG | 0.651476 | 1:+85974721 | None:intergenic |
| TGATCCGGAAGGGTTTGCGA+GGG | 0.652425 | 1:-85974758 | MsaT005858.1:CDS |
| GAATGATATAGTTTCAGATG+AGG | 0.656227 | 1:-85974320 | MsaT005858.1:CDS |
| TGCGTGATGAAAGTATATTG+AGG | 0.677283 | 1:+85975739 | None:intergenic |
| ATACTAGCCACATCCTGCGA+CGG | 0.678965 | 1:+85974652 | None:intergenic |
| GGTGGAGAAGATGCCACAGG+TGG | 0.679410 | 1:-85974734 | MsaT005858.1:CDS |
| AGAGGCAATCCAATAATCTG+CGG | 0.679844 | 1:+85974832 | None:intergenic |
| GGATTAAACCTAGATACCAG+AGG | 0.689589 | 1:-85974489 | MsaT005858.1:CDS |
| GGATACTGAGCAATAACCGA+GGG | 0.697015 | 1:+85974853 | None:intergenic |
| CGGATACTGAGCAATAACCG+AGG | 0.701830 | 1:+85974852 | None:intergenic |
| GAGATGCCTACTGTTACATG+GGG | 0.725465 | 1:-85975579 | MsaT005858.1:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 85974270 | 85975781 | 85974270 | ID=MsaG005858 |
| Chr1 | mRNA | 85974270 | 85975781 | 85974270 | ID=MsaT005858.1;Parent=MsaG005858 |
| Chr1 | exon | 85974270 | 85975781 | 85974270 | ID=MsaT005858.1.exon1;Parent=MsaT005858.1 |
| Chr1 | CDS | 85974270 | 85975781 | 85974270 | ID=cds.MsaT005858.1;Parent=MsaT005858.1 |
| Gene Sequence |
| Protein sequence |