Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG005969 | XP_003592874.1 | 93.769 | 674 | 21 | 4 | 1 | 656 | 1 | 671 | 0.0 | 1282 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG005969 | sp|Q8L7G0|ARFA_ARATH | 67.604 | 676 | 173 | 11 | 2 | 650 | 3 | 659 | 0.0 | 874 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG005969 | tr|G7IL56|G7IL56_MEDTR | 93.769 | 674 | 21 | 4 | 1 | 656 | 1 | 671 | 0.0 | 1282 |
Gene ID | Type | Classification |
---|---|---|
MsaG005969 | TF | B3-ARF |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG001199 | MsaG005969 | 0.805937 | 1.775846e-49 | 2.751781e-47 |
MsaG001237 | MsaG005969 | 0.808552 | 4.987751e-50 | 8.225428e-48 |
MsaG001672 | MsaG005969 | 0.804132 | 4.217654e-49 | 6.266928e-47 |
MsaG002029 | MsaG005969 | 0.836177 | 1.992005e-56 | 6.912306e-54 |
MsaG002030 | MsaG005969 | 0.811625 | 1.094196e-50 | 1.944235e-48 |
MsaG002273 | MsaG005969 | 0.816083 | 1.151521e-51 | 2.287909e-49 |
MsaG002287 | MsaG005969 | 0.819693 | 1.777526e-52 | 3.877582e-50 |
MsaG002866 | MsaG005969 | 0.840353 | 1.692479e-57 | 6.680809e-55 |
MsaG003389 | MsaG005969 | 0.819955 | 1.549532e-52 | 3.404013e-50 |
MsaG004225 | MsaG005969 | 0.803956 | 4.587122e-49 | 6.788056e-47 |
MsaG004401 | MsaG005969 | 0.820821 | 9.831996e-53 | 2.209794e-50 |
MsaG005018 | MsaG005969 | 0.806474 | 1.370591e-49 | 2.151068e-47 |
MsaG005969 | MsaG006005 | 0.822086 | 5.034462e-53 | 1.170170e-50 |
MsaG005969 | MsaG006274 | 0.810933 | 1.543306e-50 | 2.696178e-48 |
MsaG005969 | MsaG006330 | 0.818837 | 2.779076e-52 | 5.927869e-50 |
MsaG005969 | MsaG008525 | 0.835062 | 3.803458e-56 | 1.276417e-53 |
MsaG005969 | MsaG010460 | 0.805582 | 2.106684e-49 | 3.237297e-47 |
MsaG005969 | MsaG010508 | 0.842096 | 5.920792e-58 | 2.469726e-55 |
MsaG005969 | MsaG010664 | 0.809106 | 3.802862e-50 | 6.355658e-48 |
MsaG005969 | MsaG011275 | 0.806190 | 1.571712e-49 | 2.450148e-47 |
MsaG005969 | MsaG011596 | 0.822783 | 3.472734e-53 | 8.225304e-51 |
MsaG005969 | MsaG012190 | 0.844144 | 1.695762e-58 | 7.554819e-56 |
MsaG005969 | MsaG013962 | 0.821150 | 8.262487e-53 | 1.873435e-50 |
MsaG005969 | MsaG013993 | 0.805113 | 2.638701e-49 | 4.010937e-47 |
MsaG005969 | MsaG015176 | 0.816074 | 1.156825e-51 | 2.297934e-49 |
MsaG005969 | MsaG016006 | 0.801780 | 1.284813e-48 | 1.808487e-46 |
MsaG005969 | MsaG016748 | 0.850436 | 3.240008e-60 | 1.782439e-57 |
MsaG005969 | MsaG016674 | 0.834794 | 4.441629e-56 | 1.478646e-53 |
MsaG005969 | MsaG016708 | 0.817438 | 5.737019e-52 | 1.180266e-49 |
MsaG005969 | MsaG017013 | 0.800735 | 2.098072e-48 | 2.884219e-46 |
MsaG005969 | MsaG018065 | 0.832382 | 1.764734e-55 | 5.471202e-53 |
MsaG005969 | MsaG018336 | 0.883729 | 7.508196e-71 | 1.617215e-67 |
MsaG005969 | MsaG018644 | 0.829928 | 7.027822e-55 | 2.029749e-52 |
MsaG005969 | MsaG019235 | 0.806959 | 1.083519e-49 | 1.719982e-47 |
MsaG005969 | MsaG019731 | 0.828830 | 1.294623e-54 | 3.623673e-52 |
MsaG005969 | MsaG020029 | 0.807645 | 7.764765e-50 | 1.252852e-47 |
MsaG005969 | MsaG020875 | 0.802061 | 1.125710e-48 | 1.594706e-46 |
MsaG005969 | MsaG022628 | 0.844632 | 1.254952e-58 | 5.681762e-56 |
MsaG005969 | MsaG023135 | 0.826128 | 5.719783e-54 | 1.484501e-51 |
MsaG005969 | MsaG023595 | 0.813922 | 3.454738e-51 | 6.499975e-49 |
MsaG005969 | MsaG023677 | 0.831374 | 3.121387e-55 | 9.397110e-53 |
MsaG005969 | MsaG023761 | 0.801019 | 1.836627e-48 | 2.540984e-46 |
MsaG005969 | MsaG023762 | 0.831563 | 2.806421e-55 | 8.495959e-53 |
MsaG005969 | MsaG024010 | 0.811561 | 1.129186e-50 | 2.003336e-48 |
MsaG005969 | MsaG024387 | 0.800682 | 2.150672e-48 | 2.953058e-46 |
MsaG005969 | MsaG027780 | 0.810027 | 2.416293e-50 | 4.129008e-48 |
MsaG005969 | MsaG029335 | 0.802892 | 7.604806e-49 | 1.097990e-46 |
MsaG005969 | MsaG029461 | 0.860796 | 3.169359e-63 | 2.540265e-60 |
MsaG005969 | MsaG029745 | 0.823066 | 2.985455e-53 | 7.125404e-51 |
MsaG005969 | MsaG029863 | 0.818743 | 2.917621e-52 | 6.208074e-50 |
MsaG005969 | MsaG036303 | 0.831573 | 2.791222e-55 | 8.452279e-53 |
MsaG005969 | MsaG036973 | 0.809383 | 3.319102e-50 | 5.584113e-48 |
MsaG005969 | MsaG037910 | 0.842906 | 3.617767e-58 | 1.548778e-55 |
MsaG005969 | MsaG040649 | 0.846899 | 3.062817e-59 | 1.494707e-56 |
MsaG005969 | MsaG040669 | 0.853179 | 5.448842e-61 | 3.299111e-58 |
MsaG005969 | MsaG043000 | 0.826097 | 5.817429e-54 | 1.508531e-51 |
MsaG005969 | MsaG043808 | 0.838077 | 6.545977e-57 | 2.406510e-54 |
MsaG005969 | MsaG044889 | 0.812679 | 6.459145e-51 | 1.178014e-48 |
MsaG005969 | MsaG045072 | 0.805594 | 2.094251e-49 | 3.219148e-47 |
MsaG005969 | MsaG045109 | 0.805303 | 2.408476e-49 | 3.677177e-47 |
MsaG005969 | MsaG045403 | 0.813488 | 4.302041e-51 | 8.006145e-49 |
MsaG005969 | MsaG045522 | 0.819794 | 1.685736e-52 | 3.687234e-50 |
MsaG005969 | MsaG046053 | 0.803850 | 4.825233e-49 | 7.122708e-47 |
MsaG005969 | MsaG046126 | 0.811886 | 9.606588e-51 | 1.718002e-48 |
MsaG005969 | MsaG046226 | 0.810992 | 1.498504e-50 | 2.621683e-48 |
MsaG005969 | MsaG046488 | 0.814315 | 2.832560e-51 | 5.381966e-49 |
MsaG005969 | MsaG046588 | 0.808419 | 5.324477e-50 | 8.752508e-48 |
MsaG005969 | MsaG046912 | 0.832731 | 1.447434e-55 | 4.533563e-53 |
MsaG005969 | MsaG047194 | 0.812573 | 6.810566e-51 | 1.238880e-48 |
MsaG005969 | MsaG001106 | 0.806245 | 1.530387e-49 | 2.388879e-47 |
MsaG005969 | MsaG001372 | 0.810121 | 2.306680e-50 | 3.950768e-48 |
MsaG005969 | MsaG001715 | 0.805601 | 2.087627e-49 | 3.209461e-47 |
MsaG005969 | MsaG007590 | 0.811563 | 1.128550e-50 | 2.002272e-48 |
MsaG005969 | MsaG006524 | 0.811336 | 1.263051e-50 | 2.228509e-48 |
MsaG005969 | MsaG015244 | 0.803842 | 4.843436e-49 | 7.148317e-47 |
MsaG005969 | MsaG013858 | 0.807281 | 9.268762e-50 | 1.482573e-47 |
MsaG005969 | MsaG013406 | 0.800553 | 2.283867e-48 | 3.126806e-46 |
MsaG005969 | MsaG013967 | 0.810719 | 1.716265e-50 | 2.982681e-48 |
MsaG005969 | MsaG011742 | 0.824736 | 1.217145e-53 | 3.039668e-51 |
MsaG005969 | MsaG014180 | 0.818926 | 2.653478e-52 | 5.673205e-50 |
MsaG005969 | MsaG015534 | 0.850265 | 3.615715e-60 | 1.977310e-57 |
MsaG005969 | MsaG014275 | 0.810753 | 1.687204e-50 | 2.934665e-48 |
MsaG005969 | MsaG013014 | 0.825417 | 8.421018e-54 | 2.142668e-51 |
MsaG005969 | MsaG028139 | 0.815282 | 1.733341e-51 | 3.374704e-49 |
MsaG005969 | MsaG030439 | 0.817394 | 5.871120e-52 | 1.206465e-49 |
MsaG005969 | MsaG032261 | 0.844264 | 1.574557e-58 | 7.042503e-56 |
MsaG005969 | MsaG032935 | 0.832521 | 1.631178e-55 | 5.077679e-53 |
MsaG005969 | MsaG031811 | 0.800550 | 2.287030e-48 | 3.130878e-46 |
MsaG005969 | MsaG029957 | 0.804462 | 3.603519e-49 | 5.395287e-47 |
MsaG005969 | MsaG033234 | 0.812753 | 6.222608e-51 | 1.136987e-48 |
MsaG005969 | MsaG031025 | 0.836220 | 1.942988e-56 | 6.751069e-54 |
MsaG005969 | MsaG030458 | 0.806994 | 1.065222e-49 | 1.692357e-47 |
MsaG005969 | MsaG037271 | 0.823760 | 2.058314e-53 | 5.006005e-51 |
MsaG005969 | MsaG036984 | 0.813814 | 3.648757e-51 | 6.846431e-49 |
MsaG005969 | MsaG042290 | 0.813435 | 4.416930e-51 | 8.209369e-49 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG005969 | MtrunA17_Chr2g0276781 | 93.769 | 674 | 21 | 4 | 1 | 656 | 1 | 671 | 0.0 | 1282 |
MsaG005969 | MtrunA17_Chr8g0346711 | 48.718 | 663 | 255 | 18 | 14 | 624 | 20 | 649 | 0.0 | 553 |
MsaG005969 | MtrunA17_Chr4g0009751 | 50.549 | 637 | 256 | 18 | 4 | 599 | 3 | 621 | 0.0 | 531 |
MsaG005969 | MtrunA17_Chr8g0385791 | 57.014 | 442 | 171 | 6 | 7 | 439 | 43 | 474 | 2.26e-161 | 484 |
MsaG005969 | MtrunA17_Chr8g0385791 | 41.489 | 188 | 86 | 2 | 468 | 631 | 622 | 809 | 2.24e-35 | 143 |
MsaG005969 | MtrunA17_Chr7g0239061 | 62.097 | 372 | 126 | 7 | 18 | 382 | 9 | 372 | 4.23e-150 | 450 |
MsaG005969 | MtrunA17_Chr7g0239061 | 41.714 | 175 | 89 | 4 | 459 | 621 | 485 | 658 | 2.24e-33 | 136 |
MsaG005969 | MtrunA17_Chr2g0285461 | 50.136 | 369 | 171 | 7 | 19 | 378 | 19 | 383 | 3.78e-103 | 334 |
MsaG005969 | MtrunA17_Chr2g0285461 | 31.405 | 121 | 81 | 2 | 501 | 620 | 744 | 863 | 6.42e-14 | 75.5 |
MsaG005969 | MtrunA17_Chr8g0376771 | 49.728 | 368 | 173 | 6 | 19 | 378 | 19 | 382 | 4.12e-102 | 332 |
MsaG005969 | MtrunA17_Chr8g0376771 | 31.293 | 147 | 92 | 5 | 478 | 620 | 728 | 869 | 1.05e-13 | 74.7 |
MsaG005969 | MtrunA17_Chr3g0109391 | 50.287 | 348 | 160 | 7 | 20 | 358 | 23 | 366 | 1.10e-100 | 326 |
MsaG005969 | MtrunA17_Chr3g0109391 | 35.135 | 111 | 69 | 3 | 512 | 620 | 702 | 811 | 8.32e-15 | 78.2 |
MsaG005969 | MtrunA17_Chr5g0433301 | 49.157 | 356 | 164 | 7 | 14 | 358 | 15 | 364 | 5.34e-100 | 324 |
MsaG005969 | MtrunA17_Chr5g0433301 | 35.135 | 111 | 68 | 3 | 513 | 620 | 694 | 803 | 4.33e-14 | 75.9 |
MsaG005969 | MtrunA17_Chr4g0029671 | 44.772 | 373 | 185 | 6 | 21 | 376 | 52 | 420 | 3.31e-99 | 321 |
MsaG005969 | MtrunA17_Chr4g0029671 | 41.146 | 192 | 68 | 5 | 462 | 653 | 635 | 781 | 1.30e-31 | 131 |
MsaG005969 | MtrunA17_Chr2g0326281 | 45.170 | 383 | 174 | 8 | 21 | 372 | 54 | 431 | 1.43e-97 | 317 |
MsaG005969 | MtrunA17_Chr2g0326281 | 46.212 | 132 | 67 | 2 | 522 | 653 | 685 | 812 | 3.18e-28 | 120 |
MsaG005969 | MtrunA17_Chr1g0156321 | 48.680 | 341 | 165 | 5 | 19 | 352 | 39 | 376 | 1.03e-93 | 308 |
MsaG005969 | MtrunA17_Chr1g0156321 | 48.387 | 93 | 44 | 3 | 531 | 621 | 753 | 843 | 5.33e-18 | 88.6 |
MsaG005969 | MtrunA17_Chr4g0046371 | 44.327 | 379 | 175 | 8 | 23 | 379 | 38 | 402 | 1.56e-92 | 301 |
MsaG005969 | MtrunA17_Chr4g0070181 | 49.422 | 346 | 162 | 7 | 19 | 356 | 19 | 359 | 1.03e-90 | 305 |
MsaG005969 | MtrunA17_Chr4g0070181 | 37.580 | 157 | 83 | 6 | 475 | 621 | 932 | 1083 | 7.42e-19 | 91.7 |
MsaG005969 | MtrunA17_Chr2g0282961 | 44.110 | 365 | 179 | 6 | 23 | 372 | 53 | 407 | 1.60e-89 | 291 |
MsaG005969 | MtrunA17_Chr2g0301251 | 48.555 | 346 | 165 | 7 | 19 | 356 | 19 | 359 | 9.52e-89 | 299 |
MsaG005969 | MtrunA17_Chr2g0301251 | 43.299 | 97 | 53 | 2 | 526 | 621 | 980 | 1075 | 1.18e-18 | 90.9 |
MsaG005969 | MtrunA17_Chr8g0389081 | 47.293 | 351 | 164 | 8 | 19 | 356 | 28 | 370 | 7.72e-86 | 291 |
MsaG005969 | MtrunA17_Chr8g0389081 | 45.000 | 100 | 53 | 2 | 523 | 621 | 976 | 1074 | 4.90e-20 | 95.1 |
MsaG005969 | MtrunA17_Chr1g0181211 | 28.338 | 674 | 381 | 19 | 23 | 611 | 27 | 683 | 1.04e-55 | 201 |
MsaG005969 | MtrunA17_Chr2g0326761 | 36.176 | 387 | 183 | 12 | 19 | 356 | 7 | 378 | 2.30e-54 | 197 |
MsaG005969 | MtrunA17_Chr4g0028971 | 34.152 | 407 | 205 | 11 | 23 | 376 | 12 | 408 | 1.85e-50 | 186 |
MsaG005969 | MtrunA17_Chr3g0115271 | 34.518 | 394 | 209 | 11 | 19 | 372 | 15 | 399 | 3.18e-50 | 184 |
MsaG005969 | MtrunA17_Chr1g0199681 | 32.603 | 411 | 215 | 10 | 2 | 364 | 73 | 469 | 8.15e-50 | 184 |
MsaG005969 | MtrunA17_Chr7g0264171 | 31.308 | 428 | 227 | 13 | 15 | 385 | 23 | 440 | 1.32e-46 | 174 |
MsaG005969 | MtrunA17_Chr8g0356211 | 41.558 | 231 | 120 | 6 | 133 | 356 | 2 | 224 | 3.88e-45 | 163 |
MsaG005969 | MtrunA17_Chr5g0424931 | 31.088 | 386 | 212 | 10 | 23 | 372 | 19 | 386 | 2.21e-41 | 158 |
MsaG005969 | MtrunA17_Chr5g0417281 | 32.172 | 373 | 204 | 13 | 22 | 373 | 10 | 354 | 8.89e-41 | 156 |
MsaG005969 | MtrunA17_Chr7g0264161 | 32.803 | 314 | 185 | 10 | 32 | 332 | 1 | 301 | 1.13e-36 | 139 |
MsaG005969 | MtrunA17_Chr1g0178011 | 31.214 | 346 | 216 | 10 | 23 | 359 | 12 | 344 | 2.91e-36 | 142 |
MsaG005969 | MtrunA17_Chr2g0277461 | 30.814 | 344 | 219 | 8 | 23 | 360 | 13 | 343 | 8.51e-35 | 137 |
MsaG005969 | MtrunA17_Chr5g0436761 | 29.620 | 368 | 217 | 13 | 22 | 370 | 11 | 355 | 1.79e-32 | 130 |
MsaG005969 | MtrunA17_Chr5g0417211 | 30.422 | 332 | 196 | 13 | 23 | 340 | 12 | 322 | 1.13e-31 | 127 |
MsaG005969 | MtrunA17_Chr5g0424801 | 27.979 | 386 | 228 | 13 | 23 | 384 | 12 | 371 | 7.90e-31 | 124 |
MsaG005969 | MtrunA17_Chr5g0425261 | 28.238 | 386 | 227 | 13 | 23 | 384 | 12 | 371 | 1.54e-30 | 124 |
MsaG005969 | MtrunA17_Chr2g0289221 | 31.003 | 329 | 181 | 14 | 23 | 332 | 20 | 321 | 3.79e-29 | 119 |
MsaG005969 | MtrunA17_Chr5g0424741 | 26.302 | 384 | 231 | 13 | 23 | 366 | 12 | 383 | 1.66e-27 | 117 |
MsaG005969 | MtrunA17_Chr2g0277531 | 27.628 | 333 | 190 | 13 | 20 | 332 | 17 | 318 | 7.96e-27 | 111 |
MsaG005969 | MtrunA17_Chr5g0425661 | 32.995 | 197 | 121 | 5 | 23 | 216 | 37 | 225 | 9.97e-25 | 103 |
MsaG005969 | MtrunA17_Chr1g0156301 | 41.758 | 91 | 37 | 2 | 531 | 621 | 176 | 250 | 1.39e-14 | 74.3 |
MsaG005969 | MtrunA17_Chr1g0183251 | 33.333 | 123 | 57 | 3 | 527 | 624 | 138 | 260 | 6.37e-13 | 69.7 |
MsaG005969 | MtrunA17_Chr1g0193861 | 32.039 | 103 | 56 | 2 | 523 | 611 | 66 | 168 | 3.42e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG005969 | AT1G59750.4 | 68.006 | 672 | 172 | 11 | 2 | 650 | 3 | 654 | 0.0 | 877 |
MsaG005969 | AT1G59750.2 | 67.905 | 673 | 173 | 11 | 2 | 650 | 3 | 656 | 0.0 | 875 |
MsaG005969 | AT1G59750.1 | 67.604 | 676 | 173 | 11 | 2 | 650 | 3 | 659 | 0.0 | 874 |
MsaG005969 | AT1G59750.3 | 67.604 | 676 | 173 | 11 | 2 | 650 | 3 | 659 | 0.0 | 874 |
MsaG005969 | AT2G46530.1 | 51.373 | 619 | 244 | 15 | 13 | 623 | 11 | 580 | 0.0 | 560 |
MsaG005969 | AT2G46530.3 | 51.118 | 626 | 249 | 15 | 6 | 623 | 25 | 601 | 0.0 | 560 |
MsaG005969 | AT3G61830.1 | 50.781 | 640 | 237 | 19 | 10 | 633 | 12 | 589 | 0.0 | 553 |
MsaG005969 | AT4G23980.2 | 50.237 | 633 | 268 | 17 | 13 | 622 | 2 | 610 | 8.81e-180 | 525 |
MsaG005969 | AT4G23980.1 | 50.000 | 634 | 270 | 17 | 13 | 622 | 2 | 612 | 1.90e-179 | 524 |
MsaG005969 | AT3G61830.2 | 50.000 | 600 | 222 | 19 | 50 | 633 | 1 | 538 | 1.61e-170 | 498 |
MsaG005969 | AT5G62000.2 | 63.409 | 399 | 135 | 5 | 7 | 397 | 45 | 440 | 3.10e-169 | 506 |
MsaG005969 | AT5G62000.2 | 36.842 | 228 | 103 | 7 | 426 | 622 | 606 | 823 | 7.18e-36 | 145 |
MsaG005969 | AT5G62000.5 | 63.409 | 399 | 135 | 5 | 7 | 397 | 45 | 440 | 3.10e-169 | 506 |
MsaG005969 | AT5G62000.5 | 36.842 | 228 | 103 | 7 | 426 | 622 | 606 | 823 | 7.18e-36 | 145 |
MsaG005969 | AT5G62000.3 | 63.409 | 399 | 135 | 5 | 7 | 397 | 45 | 440 | 3.10e-169 | 506 |
MsaG005969 | AT5G62000.3 | 36.842 | 228 | 103 | 7 | 426 | 622 | 606 | 823 | 7.18e-36 | 145 |
MsaG005969 | AT5G62000.1 | 63.409 | 399 | 135 | 5 | 7 | 397 | 45 | 440 | 3.10e-169 | 506 |
MsaG005969 | AT5G62000.1 | 36.842 | 228 | 103 | 7 | 426 | 622 | 606 | 823 | 7.18e-36 | 145 |
MsaG005969 | AT5G62000.4 | 63.409 | 399 | 135 | 5 | 7 | 397 | 45 | 440 | 3.53e-169 | 505 |
MsaG005969 | AT5G62000.4 | 36.842 | 228 | 103 | 7 | 426 | 622 | 606 | 823 | 7.29e-36 | 145 |
MsaG005969 | AT1G35540.1 | 41.440 | 625 | 307 | 14 | 20 | 628 | 24 | 605 | 4.09e-148 | 443 |
MsaG005969 | AT1G34410.1 | 41.158 | 622 | 294 | 17 | 20 | 618 | 24 | 596 | 5.48e-143 | 430 |
MsaG005969 | AT2G46530.2 | 47.212 | 538 | 226 | 15 | 95 | 623 | 5 | 493 | 2.53e-141 | 422 |
MsaG005969 | AT1G35520.1 | 40.032 | 632 | 306 | 16 | 2 | 611 | 9 | 589 | 4.87e-139 | 419 |
MsaG005969 | AT1G34310.1 | 41.100 | 618 | 286 | 18 | 20 | 611 | 24 | 589 | 1.37e-138 | 418 |
MsaG005969 | AT1G34390.1 | 40.946 | 613 | 294 | 16 | 20 | 612 | 24 | 588 | 1.18e-134 | 408 |
MsaG005969 | AT1G35240.1 | 49.162 | 358 | 168 | 6 | 20 | 372 | 24 | 372 | 1.20e-108 | 340 |
MsaG005969 | AT1G35240.1 | 50.980 | 102 | 46 | 2 | 520 | 618 | 482 | 582 | 2.85e-26 | 114 |
MsaG005969 | AT1G34170.1 | 42.250 | 400 | 205 | 8 | 16 | 400 | 18 | 406 | 2.10e-102 | 322 |
MsaG005969 | AT1G30330.3 | 50.678 | 369 | 169 | 7 | 19 | 378 | 21 | 385 | 7.82e-102 | 332 |
MsaG005969 | AT1G30330.3 | 35.593 | 118 | 71 | 4 | 512 | 626 | 774 | 889 | 1.44e-14 | 78.2 |
MsaG005969 | AT1G30330.2 | 50.678 | 369 | 169 | 7 | 19 | 378 | 21 | 385 | 7.82e-102 | 332 |
MsaG005969 | AT1G30330.2 | 35.593 | 118 | 71 | 4 | 512 | 626 | 774 | 889 | 1.44e-14 | 78.2 |
MsaG005969 | AT1G30330.1 | 50.678 | 369 | 169 | 7 | 19 | 378 | 19 | 383 | 8.53e-102 | 332 |
MsaG005969 | AT1G30330.1 | 35.593 | 118 | 71 | 4 | 512 | 626 | 772 | 887 | 1.42e-14 | 78.2 |
MsaG005969 | AT5G37020.2 | 50.287 | 348 | 160 | 7 | 20 | 358 | 19 | 362 | 1.00e-100 | 325 |
MsaG005969 | AT5G37020.2 | 40.260 | 77 | 44 | 2 | 524 | 599 | 697 | 772 | 3.68e-11 | 67.0 |
MsaG005969 | AT5G37020.1 | 50.287 | 348 | 160 | 7 | 20 | 358 | 19 | 362 | 3.01e-100 | 325 |
MsaG005969 | AT5G37020.1 | 37.755 | 98 | 59 | 2 | 524 | 620 | 697 | 793 | 2.39e-14 | 77.4 |
MsaG005969 | AT5G60450.2 | 44.562 | 377 | 188 | 6 | 19 | 379 | 37 | 408 | 4.28e-96 | 312 |
MsaG005969 | AT5G60450.2 | 57.609 | 92 | 39 | 0 | 527 | 618 | 636 | 727 | 1.28e-27 | 119 |
MsaG005969 | AT5G60450.1 | 44.681 | 376 | 187 | 6 | 20 | 379 | 62 | 432 | 6.28e-96 | 313 |
MsaG005969 | AT5G60450.1 | 57.609 | 92 | 39 | 0 | 527 | 618 | 660 | 751 | 1.41e-27 | 119 |
MsaG005969 | AT1G19850.2 | 46.761 | 355 | 178 | 6 | 6 | 352 | 26 | 377 | 1.54e-93 | 308 |
MsaG005969 | AT1G19850.2 | 38.760 | 129 | 71 | 3 | 500 | 621 | 744 | 871 | 2.46e-17 | 87.0 |
MsaG005969 | AT1G19850.1 | 46.761 | 355 | 178 | 6 | 6 | 352 | 37 | 388 | 2.17e-93 | 308 |
MsaG005969 | AT1G19850.1 | 38.760 | 129 | 71 | 3 | 500 | 621 | 755 | 882 | 2.68e-17 | 86.7 |
MsaG005969 | AT1G34170.2 | 39.750 | 400 | 189 | 8 | 16 | 400 | 18 | 380 | 1.24e-89 | 287 |
MsaG005969 | AT1G34170.3 | 39.750 | 400 | 189 | 8 | 16 | 400 | 18 | 380 | 7.94e-89 | 287 |
MsaG005969 | AT1G34170.3 | 42.276 | 123 | 63 | 2 | 508 | 623 | 402 | 523 | 1.23e-23 | 105 |
MsaG005969 | AT5G20730.2 | 46.631 | 371 | 185 | 7 | 20 | 382 | 21 | 386 | 1.89e-87 | 296 |
MsaG005969 | AT5G20730.2 | 42.268 | 97 | 54 | 2 | 526 | 621 | 1031 | 1126 | 2.17e-18 | 90.5 |
MsaG005969 | AT2G33860.1 | 43.562 | 365 | 181 | 6 | 23 | 372 | 54 | 408 | 2.07e-86 | 283 |
MsaG005969 | AT5G20730.3 | 46.505 | 372 | 185 | 8 | 20 | 382 | 21 | 387 | 6.67e-86 | 292 |
MsaG005969 | AT5G20730.3 | 42.268 | 97 | 54 | 2 | 526 | 621 | 1032 | 1127 | 2.26e-18 | 90.5 |
MsaG005969 | AT5G20730.1 | 46.505 | 372 | 185 | 8 | 20 | 382 | 21 | 387 | 8.33e-86 | 292 |
MsaG005969 | AT5G20730.1 | 40.909 | 110 | 59 | 3 | 526 | 634 | 1032 | 1136 | 2.21e-18 | 90.5 |
MsaG005969 | AT1G19220.1 | 45.822 | 371 | 188 | 7 | 20 | 382 | 20 | 385 | 5.18e-85 | 289 |
MsaG005969 | AT1G19220.1 | 44.330 | 97 | 52 | 2 | 526 | 621 | 952 | 1047 | 1.38e-19 | 94.4 |
MsaG005969 | AT5G37020.3 | 49.446 | 271 | 125 | 6 | 96 | 358 | 1 | 267 | 9.40e-68 | 235 |
MsaG005969 | AT5G37020.3 | 37.755 | 98 | 59 | 2 | 524 | 620 | 602 | 698 | 1.99e-14 | 77.4 |
MsaG005969 | AT2G33860.2 | 45.455 | 253 | 130 | 3 | 125 | 372 | 2 | 251 | 1.26e-58 | 204 |
MsaG005969 | AT1G43950.1 | 44.643 | 224 | 110 | 4 | 4 | 222 | 8 | 222 | 9.97e-58 | 194 |
MsaG005969 | AT2G28350.2 | 33.415 | 410 | 207 | 9 | 19 | 374 | 6 | 403 | 9.31e-53 | 193 |
MsaG005969 | AT2G28350.1 | 33.415 | 410 | 207 | 9 | 19 | 374 | 6 | 403 | 9.56e-53 | 193 |
MsaG005969 | AT4G30080.1 | 34.527 | 391 | 201 | 9 | 14 | 359 | 10 | 390 | 1.05e-52 | 193 |
MsaG005969 | AT1G77850.1 | 30.334 | 389 | 217 | 10 | 6 | 352 | 1 | 377 | 1.03e-41 | 160 |
MsaG005969 | AT1G77850.2 | 30.334 | 389 | 217 | 10 | 6 | 352 | 1 | 377 | 1.18e-41 | 160 |
MsaG005969 | AT3G17600.1 | 44.578 | 83 | 43 | 2 | 535 | 615 | 75 | 156 | 6.31e-14 | 70.5 |
MsaG005969 | AT2G46990.1 | 42.683 | 82 | 40 | 2 | 536 | 611 | 88 | 168 | 1.17e-13 | 70.1 |
MsaG005969 | AT3G62100.1 | 41.463 | 82 | 41 | 2 | 536 | 611 | 86 | 166 | 6.95e-13 | 67.8 |
MsaG005969 | AT5G25890.1 | 29.213 | 89 | 62 | 1 | 535 | 623 | 83 | 170 | 5.71e-11 | 62.4 |
Find 180 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCATATACTTCATCTGTTTC+AGG | 0.134407 | 2:-139981 | None:intergenic |
CAGCATGCATCTTGGTGTTT+TGG | 0.186948 | 2:+145284 | MsaT005969.1:CDS |
CAGCTCACACACCTTCTTTC+AGG | 0.198099 | 2:-145740 | None:intergenic |
GCAACTAGCTTTCTTGGTTT+TGG | 0.225356 | 2:+146650 | MsaT005969.1:CDS |
AGCATCCTTACATCGGTTTC+AGG | 0.238212 | 2:-140020 | None:intergenic |
TCTACTGCAACTAGCTTTCT+TGG | 0.242410 | 2:+146644 | MsaT005969.1:CDS |
TGGGTTGGCTGGGAGTTTGC+TGG | 0.246865 | 2:-146389 | None:intergenic |
TCTTGTTTCGTTGGGTTGGC+TGG | 0.249406 | 2:-146400 | None:intergenic |
TTAAGTGCTACAGGTGAAAA+AGG | 0.249676 | 2:-146737 | None:intergenic |
TGAGGATCTGCTTAGGAAAT+TGG | 0.255784 | 2:+148474 | MsaT005969.1:CDS |
TTCCTGACTGAGTAATTTAC+AGG | 0.259941 | 2:+144958 | MsaT005969.1:intron |
CGTCGCCAGCCACTAACTTT+TGG | 0.279726 | 2:-145031 | None:intergenic |
GGAAATGGCTGTAGGCTCTT+TGG | 0.292769 | 2:+146788 | MsaT005969.1:CDS |
TTCTGAATGGCGATCGTTAA+AGG | 0.304620 | 2:+145891 | MsaT005969.1:CDS |
TCAGACCGATTAACATTTGA+TGG | 0.307170 | 2:-146931 | None:intergenic |
GAAATGGCTGTAGGCTCTTT+GGG | 0.307324 | 2:+146789 | MsaT005969.1:CDS |
TAGAGTTTCTCCATGGGAAT+TGG | 0.341674 | 2:+146346 | MsaT005969.1:CDS |
AAGAAGCTTTCACCGAAAAT+AGG | 0.359026 | 2:+148772 | MsaT005969.1:CDS |
AAGATAATAAATCATCTGTC+TGG | 0.362077 | 2:+145863 | MsaT005969.1:CDS |
GCGACGCATTTATATTCTTA+AGG | 0.364246 | 2:+145048 | MsaT005969.1:CDS |
AGTGGTCAATATTCATCTTC+GGG | 0.365481 | 2:+139829 | MsaT005969.1:CDS |
CCTGTAGCACTTAAAGAATC+TGG | 0.366455 | 2:+146746 | MsaT005969.1:CDS |
GCTCGAGGCATCTATGAATC+AGG | 0.366491 | 2:+139754 | MsaT005969.1:intron |
AGTGGTTAGCAAGTGGCGCC+TGG | 0.367329 | 2:-144986 | None:intergenic |
TCCCATGGAGAAACTCTATC+TGG | 0.379411 | 2:-146341 | None:intergenic |
TTGTCAGTTCCAAAAGTTAG+TGG | 0.391821 | 2:+145022 | MsaT005969.1:CDS |
CTTGTTTCGTTGGGTTGGCT+GGG | 0.393670 | 2:-146399 | None:intergenic |
GCCGTGATCTCTTGTTTCGT+TGG | 0.393836 | 2:-146409 | None:intergenic |
ACTGTACACCTTGGAGGTTC+AGG | 0.402087 | 2:-140234 | None:intergenic |
AAGTGGTCAATATTCATCTT+CGG | 0.406745 | 2:+139828 | MsaT005969.1:CDS |
CCGTGATCTCTTGTTTCGTT+GGG | 0.408027 | 2:-146408 | None:intergenic |
GGTTCAGGCAGAGGATCGTC+TGG | 0.408864 | 2:-140219 | None:intergenic |
AAACAACGTTCCGGTGGAAA+TGG | 0.411637 | 2:-145322 | None:intergenic |
AGAAGGTAAACCAAGCAAAC+TGG | 0.417654 | 2:+148810 | MsaT005969.1:CDS |
CCATGTTGAGGGTCGCGATA+AGG | 0.418966 | 2:-146590 | None:intergenic |
CTGAACCATCAAATGTTAAT+CGG | 0.420775 | 2:+146926 | MsaT005969.1:CDS |
CTGCAAACTGCTCCTTTGTC+AGG | 0.421100 | 2:+146848 | MsaT005969.1:CDS |
CGGTCATCTATTGTGGGGCC+TGG | 0.422834 | 2:+148862 | MsaT005969.1:CDS |
TACATTGACTTGTTAGAAGC+AGG | 0.423055 | 2:-146683 | None:intergenic |
CCAGATTCTTTAAGTGCTAC+AGG | 0.424964 | 2:-146746 | None:intergenic |
AAGAGACAAGGCACTGGAAA+TGG | 0.428342 | 2:+146773 | MsaT005969.1:CDS |
GAAAGCTTCTTCACCTCCTC+TGG | 0.429223 | 2:-148760 | None:intergenic |
AATGTATTGGTCTAGTAGAT+TGG | 0.436725 | 2:+146700 | MsaT005969.1:CDS |
CTGAATCTTGGTGATGGATA+GGG | 0.438041 | 2:-146620 | None:intergenic |
CTCTAAAATATTGTGTAAAG+TGG | 0.440981 | 2:+139811 | MsaT005969.1:CDS |
GCAGCCACCGTGGCAAGAAC+TGG | 0.442859 | 2:+140467 | MsaT005969.1:CDS |
CGAAATCACAAACTTTCTGT+TGG | 0.445985 | 2:+145680 | MsaT005969.1:CDS |
CATTTGATGGTTCAGAATGT+TGG | 0.446500 | 2:-146918 | None:intergenic |
GAAGAGATGTTTGACATTGA+GGG | 0.446939 | 2:+148496 | MsaT005969.1:CDS |
GGAGAGCTCGAGTTGGAGTC+AGG | 0.447005 | 2:+145211 | MsaT005969.1:intron |
ACAATAGATGACCGGTCCTC+AGG | 0.452615 | 2:-148853 | None:intergenic |
ATCATGCCTGCGGTCTCCTC+AGG | 0.453007 | 2:+146984 | MsaT005969.1:CDS |
CCCTCAAGGTCACATGGAAC+AGG | 0.455282 | 2:+139462 | MsaT005969.1:CDS |
GTAATGTATCTCAGGTTCAA+TGG | 0.455705 | 2:+146294 | MsaT005969.1:intron |
GAGGACCGGTCATCTATTGT+GGG | 0.456037 | 2:+148856 | MsaT005969.1:CDS |
GGGAAAGGTGGAGCGTCAAC+TGG | 0.457239 | 2:-146569 | None:intergenic |
AAGATGATATGATGATGGTT+GGG | 0.459654 | 2:+148569 | MsaT005969.1:CDS |
GAAATCACAAACTTTCTGTT+GGG | 0.463689 | 2:+145681 | MsaT005969.1:CDS |
GCTTCGGAATCCAGTTTGCT+TGG | 0.465346 | 2:-148820 | None:intergenic |
AGGCGCCACTTGCTAACCAC+TGG | 0.466079 | 2:+144988 | MsaT005969.1:CDS |
TTGTCACTCTTCCTCGTGAA+GGG | 0.467505 | 2:+139422 | MsaT005969.1:CDS |
CTCAGGATTGACAACTGCTT+CGG | 0.469365 | 2:-148836 | None:intergenic |
CATGTTGAGGGTCGCGATAA+GGG | 0.471170 | 2:-146589 | None:intergenic |
GGTTTACCTTCTTCATTGCT+CGG | 0.472689 | 2:-148799 | None:intergenic |
GAATTGTGGCATGCCTGTGC+TGG | 0.473261 | 2:+139394 | MsaT005969.1:CDS |
CCTGTTCCATGTGACCTTGA+GGG | 0.476786 | 2:-139462 | None:intergenic |
TTGGGATGCGATTCAAAATG+AGG | 0.477303 | 2:+145699 | MsaT005969.1:CDS |
CGATTCAAAATGAGGTTTGA+GGG | 0.479357 | 2:+145707 | MsaT005969.1:CDS |
GGAAGAGATGTTTGACATTG+AGG | 0.479569 | 2:+148495 | MsaT005969.1:CDS |
TAATGTATCTCAGGTTCAAT+GGG | 0.483572 | 2:+146295 | MsaT005969.1:intron |
TGAGGACCGGTCATCTATTG+TGG | 0.485382 | 2:+148855 | MsaT005969.1:CDS |
GATCTCTTGTTTCGTTGGGT+TGG | 0.487252 | 2:-146404 | None:intergenic |
TACTTACAATAAACTCTGAC+CGG | 0.489576 | 2:-145637 | None:intergenic |
GAAGAATCGGTCATTGTTGA+AGG | 0.493223 | 2:-146443 | None:intergenic |
TAGGGGTCTCTTCCATGTTG+AGG | 0.493687 | 2:-146602 | None:intergenic |
GCTGAATCTTGGTGATGGAT+AGG | 0.496211 | 2:-146621 | None:intergenic |
AGGGGTCTCTTCCATGTTGA+GGG | 0.496601 | 2:-146601 | None:intergenic |
AGTGACAAGGGGTCCAGCAC+AGG | 0.502780 | 2:-139407 | None:intergenic |
CTTCTAACAAGTCAATGTAT+TGG | 0.505095 | 2:+146687 | MsaT005969.1:CDS |
GTTGCAGTAGAGCTGAATCT+TGG | 0.505751 | 2:-146632 | None:intergenic |
CAGTTCCAAAAGTTAGTGGC+TGG | 0.506013 | 2:+145026 | MsaT005969.1:CDS |
AGGTTCAGTGGTACAATTGT+GGG | 0.507107 | 2:+145835 | MsaT005969.1:intron |
CCAGGTTCACATGCAAGGTA+TGG | 0.509483 | 2:+148411 | MsaT005969.1:intron |
CACCTTGGAGGTTCAGGCAG+AGG | 0.511883 | 2:-140228 | None:intergenic |
GTTACCTTGCAGAGAAGAAT+CGG | 0.512172 | 2:-146456 | None:intergenic |
GCGATTCAAAATGAGGTTTG+AGG | 0.512793 | 2:+145706 | MsaT005969.1:CDS |
ATGGATATGAGGATCTGCTT+AGG | 0.512809 | 2:+148467 | MsaT005969.1:CDS |
GTGGTTAGCAAGTGGCGCCT+GGG | 0.519747 | 2:-144985 | None:intergenic |
TCAGCTGTTACAAGCCGTGC+AGG | 0.520745 | 2:+139113 | MsaT005969.1:CDS |
AGATGATTGTCTTCCACCAC+TGG | 0.522916 | 2:+140332 | MsaT005969.1:CDS |
TGCAAGGTATGGCTGTTGGA+AGG | 0.523418 | 2:+148422 | MsaT005969.1:CDS |
GAAGATGATATGATGATGGT+TGG | 0.523906 | 2:+148568 | MsaT005969.1:CDS |
GTCATTGTTGAAGGTAGAAT+AGG | 0.525173 | 2:-146434 | None:intergenic |
CTGTCTGGGCTGATTCTGAA+TGG | 0.532253 | 2:+145878 | MsaT005969.1:CDS |
GAATGAACTGTACACCTTGG+AGG | 0.532998 | 2:-140240 | None:intergenic |
TCTAGTCACAGCATGCATCT+TGG | 0.534965 | 2:+145276 | MsaT005969.1:CDS |
CACATGCAAGGTATGGCTGT+TGG | 0.535621 | 2:+148418 | MsaT005969.1:CDS |
AACTGCTCCTTTGTCAGGAA+GGG | 0.537873 | 2:+146853 | MsaT005969.1:CDS |
ATGCTTTATACAAGGAATTG+TGG | 0.544099 | 2:+139380 | MsaT005969.1:CDS |
ACCTGTTCCATGTGACCTTG+AGG | 0.544594 | 2:-139463 | None:intergenic |
TGACTAGATATGACAGAAGA+TGG | 0.546076 | 2:-145261 | None:intergenic |
AGATAATAAATCATCTGTCT+GGG | 0.549007 | 2:+145864 | MsaT005969.1:CDS |
AAACACAGAAAACAACGTTC+CGG | 0.549480 | 2:-145331 | None:intergenic |
TTGTTCCAGGTTCACATGCA+AGG | 0.550862 | 2:+148406 | MsaT005969.1:intron |
CTTGTCACTCTTCCTCGTGA+AGG | 0.552035 | 2:+139421 | MsaT005969.1:CDS |
GGAGAGAAGAGACAAGGCAC+TGG | 0.552498 | 2:+146767 | MsaT005969.1:CDS |
GACATTGAGGGCGAGCTCTG+TGG | 0.553894 | 2:+148508 | MsaT005969.1:CDS |
AACTAATGATGCTTTATACA+AGG | 0.555709 | 2:+139372 | MsaT005969.1:CDS |
GTTGGCTGGGAGTTTGCTGG+AGG | 0.557911 | 2:-146386 | None:intergenic |
AAACTGCTCCTTTGTCAGGA+AGG | 0.559088 | 2:+146852 | MsaT005969.1:CDS |
CAGGTTCAGTGGTACAATTG+TGG | 0.559846 | 2:+145834 | MsaT005969.1:intron |
GTCCAGATAGAGTTTCTCCA+TGG | 0.563529 | 2:+146339 | MsaT005969.1:CDS |
TGAATCTTGGTGATGGATAG+GGG | 0.566632 | 2:-146619 | None:intergenic |
ATCAAATAATCTTACAGCCA+CGG | 0.567519 | 2:-148598 | None:intergenic |
GTGACTCCTGAGGAGACCGC+AGG | 0.572855 | 2:-146990 | None:intergenic |
GCATCTCATGCCATTTCCAC+CGG | 0.574440 | 2:+145312 | MsaT005969.1:CDS |
GTGATGAAGTACCTGAAAGA+AGG | 0.575293 | 2:+145729 | MsaT005969.1:CDS |
AGATGATATGATGATGGTTG+GGG | 0.575551 | 2:+148570 | MsaT005969.1:CDS |
ATAAAGTTGCTAACCAGTGG+TGG | 0.576718 | 2:-140345 | None:intergenic |
CCTTATCGCGACCCTCAACA+TGG | 0.577301 | 2:+146590 | MsaT005969.1:CDS |
ATCCTCTGCCTGAACCTCCA+AGG | 0.580105 | 2:+140226 | MsaT005969.1:CDS |
ACATTGACTTGTTAGAAGCA+GGG | 0.583442 | 2:-146682 | None:intergenic |
GGCGCCACTTGCTAACCACT+GGG | 0.585156 | 2:+144989 | MsaT005969.1:CDS |
CAGTTGTCAATCCTGAGGAC+CGG | 0.585541 | 2:+148842 | MsaT005969.1:CDS |
CTCGAGGCATCTATGAATCA+GGG | 0.588536 | 2:+139755 | MsaT005969.1:CDS |
GGTCTTCCGAGCAATGAAGA+AGG | 0.588889 | 2:+148793 | MsaT005969.1:CDS |
GCTTCTGACACTAGCACTCA+CGG | 0.590110 | 2:+140282 | MsaT005969.1:CDS |
CTGGTTGCAACTGATTTGCA+TGG | 0.590503 | 2:+140486 | MsaT005969.1:CDS |
CCCAACGAAACAAGAGATCA+CGG | 0.593547 | 2:+146408 | MsaT005969.1:CDS |
TGTCACTCTTCCTCGTGAAG+GGG | 0.594234 | 2:+139423 | MsaT005969.1:CDS |
CAATGAAGATGATATGATGA+TGG | 0.595334 | 2:+148564 | MsaT005969.1:CDS |
CCCGCTGAATACAGGTTCAG+TGG | 0.595738 | 2:+145823 | MsaT005969.1:intron |
CACAGAAAACAACGTTCCGG+TGG | 0.598297 | 2:-145328 | None:intergenic |
TGAAAATGGAGAGCTCGAGT+TGG | 0.599723 | 2:+145204 | MsaT005969.1:intron |
ACCTGGGAGTATTAGCAACC+AGG | 0.602243 | 2:-148880 | None:intergenic |
TGAGGGTCGCGATAAGGGAA+AGG | 0.605416 | 2:-146584 | None:intergenic |
TTAGAGGGCAGATTAAAGGA+AGG | 0.605910 | 2:-139794 | None:intergenic |
TTACTTCCCTCAAGGTCACA+TGG | 0.605985 | 2:+139456 | MsaT005969.1:CDS |
TCCACCCAGTGGTTAGCAAG+TGG | 0.606265 | 2:-144993 | None:intergenic |
TCAGCATCACAACTTACTGA+AGG | 0.608499 | 2:-146958 | None:intergenic |
GAAATGAAACCGAACCTGCA+CGG | 0.608673 | 2:-139127 | None:intergenic |
ATTGTTGAAGGTAGAATAGG+AGG | 0.609621 | 2:-146431 | None:intergenic |
ACAAGTGGCTCCAATTCCCA+TGG | 0.609636 | 2:-146356 | None:intergenic |
AAGGCACTGGAAATGGCTGT+AGG | 0.609978 | 2:+146780 | MsaT005969.1:CDS |
CAGGCCCCACAATAGATGAC+CGG | 0.614895 | 2:-148861 | None:intergenic |
AATGAATGAACTGTACACCT+TGG | 0.617416 | 2:-140243 | None:intergenic |
TTCACGAGGAAGAGTGACAA+GGG | 0.618268 | 2:-139419 | None:intergenic |
GTAGAGCTGAATCTTGGTGA+TGG | 0.621492 | 2:-146626 | None:intergenic |
GCAAGGTATGGCTGTTGGAA+GGG | 0.622306 | 2:+148423 | MsaT005969.1:CDS |
AAGTATTAACAAGTATCTTG+AGG | 0.629801 | 2:+145655 | MsaT005969.1:CDS |
GTTCAGGCAGAGGATCGTCT+GGG | 0.636939 | 2:-140218 | None:intergenic |
TGTCTGCTTTGTGACTCCTG+AGG | 0.636995 | 2:-147000 | None:intergenic |
TCCAGATAGAGTTTCTCCAT+GGG | 0.639065 | 2:+146340 | MsaT005969.1:CDS |
AGAGTGTATTACTTCCCTCA+AGG | 0.640899 | 2:+139448 | MsaT005969.1:CDS |
CTTCACGAGGAAGAGTGACA+AGG | 0.643168 | 2:-139420 | None:intergenic |
GGGTCGCGATAAGGGAAAGG+TGG | 0.643453 | 2:-146581 | None:intergenic |
GTTGCAACCAGTTCTTGCCA+CGG | 0.644013 | 2:-140474 | None:intergenic |
ACAAATAAGAAGCTGCACAA+AGG | 0.645385 | 2:+147020 | MsaT005969.1:CDS |
CTTGTTGGTTTAGCAAAGTG+AGG | 0.646960 | 2:+140188 | MsaT005969.1:intron |
CGAAGCAGTTGTCAATCCTG+AGG | 0.652184 | 2:+148837 | MsaT005969.1:CDS |
TCTGGACGCAAAATTGATGA+CGG | 0.655588 | 2:-146323 | None:intergenic |
GAGCTCGAGTTGGAGTCAGG+AGG | 0.657237 | 2:+145214 | MsaT005969.1:intron |
GAATCTGGAGAGAAGAGACA+AGG | 0.663528 | 2:+146761 | MsaT005969.1:CDS |
ATGACCGATTCTTCTCTGCA+AGG | 0.665319 | 2:+146452 | MsaT005969.1:CDS |
TACACTCTCTCCCCTTCACG+AGG | 0.668420 | 2:-139433 | None:intergenic |
AGGACCGGTCATCTATTGTG+GGG | 0.669625 | 2:+148857 | MsaT005969.1:CDS |
GCAACCAGTTCTTGCCACGG+TGG | 0.672804 | 2:-140471 | None:intergenic |
TGATGGTTGGGGATGATCCG+TGG | 0.673950 | 2:+148581 | MsaT005969.1:CDS |
GCTGGAGGAGTAGATACAAG+TGG | 0.679626 | 2:-146371 | None:intergenic |
GTTCATCTACACACCAGAGG+AGG | 0.686254 | 2:+148747 | MsaT005969.1:CDS |
ATGCTGACAAATCATGCCTG+CGG | 0.688919 | 2:+146974 | MsaT005969.1:CDS |
GGAAATGGCATGAGATGCAG+TGG | 0.688967 | 2:-145307 | None:intergenic |
CTGATTTGCATGGAAATGAG+TGG | 0.690536 | 2:+140496 | MsaT005969.1:CDS |
AGTAATTTACAGGACAACCC+AGG | 0.694391 | 2:+144968 | MsaT005969.1:intron |
GCCACTTGCTAACCACTGGG+TGG | 0.705306 | 2:+144992 | MsaT005969.1:CDS |
GACAAAGACACTCCACCCAG+TGG | 0.718661 | 2:-145004 | None:intergenic |
TCACGAGGAAGAGTGACAAG+GGG | 0.718761 | 2:-139418 | None:intergenic |
ACATGACTCAGCAGCCACCG+TGG | 0.724404 | 2:+140457 | MsaT005969.1:CDS |
AATGTTCATCTACACACCAG+AGG | 0.729044 | 2:+148744 | MsaT005969.1:CDS |
TCTGACACTAGCACTCACGG+AGG | 0.860330 | 2:+140285 | MsaT005969.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 139095 | 148891 | 139095 | ID=MsaG005969 |
Chr2 | mRNA | 139095 | 148891 | 139095 | ID=MsaT005969.1;Parent=MsaG005969 |
Chr2 | exon | 139095 | 139134 | 139095 | ID=MsaT005969.1.exon1;Parent=MsaT005969.1 |
Chr2 | CDS | 139095 | 139134 | 139095 | ID=cds.MsaT005969.1;Parent=MsaT005969.1 |
Chr2 | exon | 139368 | 139483 | 139368 | ID=MsaT005969.1.exon2;Parent=MsaT005969.1 |
Chr2 | CDS | 139368 | 139483 | 139368 | ID=cds.MsaT005969.1;Parent=MsaT005969.1 |
Chr2 | exon | 139755 | 139850 | 139755 | ID=MsaT005969.1.exon3;Parent=MsaT005969.1 |
Chr2 | CDS | 139755 | 139850 | 139755 | ID=cds.MsaT005969.1;Parent=MsaT005969.1 |
Chr2 | exon | 139975 | 140031 | 139975 | ID=MsaT005969.1.exon4;Parent=MsaT005969.1 |
Chr2 | CDS | 139975 | 140031 | 139975 | ID=cds.MsaT005969.1;Parent=MsaT005969.1 |
Chr2 | exon | 140201 | 140353 | 140201 | ID=MsaT005969.1.exon5;Parent=MsaT005969.1 |
Chr2 | CDS | 140201 | 140353 | 140201 | ID=cds.MsaT005969.1;Parent=MsaT005969.1 |
Chr2 | exon | 140456 | 140540 | 140456 | ID=MsaT005969.1.exon6;Parent=MsaT005969.1 |
Chr2 | CDS | 140456 | 140540 | 140456 | ID=cds.MsaT005969.1;Parent=MsaT005969.1 |
Chr2 | exon | 144970 | 145069 | 144970 | ID=MsaT005969.1.exon7;Parent=MsaT005969.1 |
Chr2 | CDS | 144970 | 145069 | 144970 | ID=cds.MsaT005969.1;Parent=MsaT005969.1 |
Chr2 | exon | 145215 | 145364 | 145215 | ID=MsaT005969.1.exon8;Parent=MsaT005969.1 |
Chr2 | CDS | 145215 | 145364 | 145215 | ID=cds.MsaT005969.1;Parent=MsaT005969.1 |
Chr2 | exon | 145631 | 145750 | 145631 | ID=MsaT005969.1.exon9;Parent=MsaT005969.1 |
Chr2 | CDS | 145631 | 145750 | 145631 | ID=cds.MsaT005969.1;Parent=MsaT005969.1 |
Chr2 | exon | 145837 | 145912 | 145837 | ID=MsaT005969.1.exon10;Parent=MsaT005969.1 |
Chr2 | CDS | 145837 | 145912 | 145837 | ID=cds.MsaT005969.1;Parent=MsaT005969.1 |
Chr2 | exon | 146308 | 146473 | 146308 | ID=MsaT005969.1.exon11;Parent=MsaT005969.1 |
Chr2 | CDS | 146308 | 146473 | 146308 | ID=cds.MsaT005969.1;Parent=MsaT005969.1 |
Chr2 | exon | 146555 | 146874 | 146555 | ID=MsaT005969.1.exon12;Parent=MsaT005969.1 |
Chr2 | CDS | 146555 | 146874 | 146555 | ID=cds.MsaT005969.1;Parent=MsaT005969.1 |
Chr2 | exon | 146913 | 147041 | 146913 | ID=MsaT005969.1.exon13;Parent=MsaT005969.1 |
Chr2 | CDS | 146913 | 147041 | 146913 | ID=cds.MsaT005969.1;Parent=MsaT005969.1 |
Chr2 | exon | 148415 | 148605 | 148415 | ID=MsaT005969.1.exon14;Parent=MsaT005969.1 |
Chr2 | CDS | 148415 | 148605 | 148415 | ID=cds.MsaT005969.1;Parent=MsaT005969.1 |
Chr2 | exon | 148720 | 148891 | 148720 | ID=MsaT005969.1.exon15;Parent=MsaT005969.1 |
Chr2 | CDS | 148720 | 148891 | 148720 | ID=cds.MsaT005969.1;Parent=MsaT005969.1 |
Gene Sequence |
Protein sequence |