AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG006426


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG006426 MtrunA17_Chr2g0281051 94.331 829 28 5 43 853 136 963 0.0 1582
MsaG006426 MtrunA17_Chr4g0048531 60.568 563 168 9 331 847 725 1279 0.0 657
MsaG006426 MtrunA17_Chr4g0048531 55.077 325 122 7 44 350 182 500 9.11e-95 323
MsaG006426 MtrunA17_Chr7g0275771 34.777 808 434 22 113 847 140 927 1.11e-142 446
MsaG006426 MtrunA17_Chr4g0075261 33.119 779 439 20 88 843 144 863 7.92e-122 389
MsaG006426 MtrunA17_Chr1g0211711 33.912 749 419 17 113 836 343 1040 1.48e-118 385
MsaG006426 MtrunA17_Chr1g0192011 30.093 864 501 22 30 851 165 967 1.14e-115 375
MsaG006426 MtrunA17_Chr1g0183311 34.367 774 426 20 113 843 144 878 6.52e-111 360
MsaG006426 MtrunA17_Chr2g0289121 32.436 743 414 18 111 843 154 818 4.74e-99 327
MsaG006426 MtrunA17_Chr5g0420361 34.074 675 380 20 195 843 157 792 1.61e-91 306
MsaG006426 MtrunA17_Chr1g0211661 32.057 705 385 18 113 787 225 865 6.66e-87 295
MsaG006426 MtrunA17_Chr6g0472441 31.055 673 365 18 195 833 99 706 3.05e-78 268
MsaG006426 MtrunA17_Chr1g0147021 32.879 514 281 17 106 592 863 1339 2.31e-69 251
MsaG006426 MtrunA17_Chr1g0147021 47.594 187 83 1 660 846 1526 1697 9.87e-50 191
MsaG006426 MtrunA17_Chr1g0211691 31.726 643 358 21 113 724 342 934 1.90e-65 236
MsaG006426 MtrunA17_Chr5g0426961 31.509 530 316 16 113 609 140 655 8.26e-62 224
MsaG006426 MtrunA17_Chr5g0426961 49.664 149 75 0 700 848 688 836 2.28e-41 163
MsaG006426 MtrunA17_Chr2g0289031 32.864 426 219 7 424 843 28 392 2.00e-61 213
MsaG006426 MtrunA17_Chr5g0448301 29.948 581 304 19 202 757 129 631 1.42e-48 182
MsaG006426 MtrunA17_Chr1g0211701 51.429 105 51 0 732 836 3 107 1.84e-33 126
MsaG006426 MtrunA17_Chr2g0289091 50.000 110 55 0 700 809 311 420 1.68e-28 119
MsaG006426 MtrunA17_Chr2g0289091 38.129 139 82 3 473 609 20 156 3.31e-17 85.1
MsaG006426 MtrunA17_Chr2g0289041 33.803 213 129 6 134 343 1 204 1.08e-25 105
MsaG006426 MtrunA17_Chr8g0361391 51.020 98 46 2 690 787 42 137 6.16e-25 102
MsaG006426 MtrunA17_Chr8g0361381 32.821 195 120 6 399 587 23 212 2.58e-16 79.0
MsaG006426 MtrunA17_Chr7g0231061 39.286 112 65 2 499 608 48 158 1.60e-15 76.3
MsaG006426 MtrunA17_Chr1g0211671 50.000 48 24 0 789 836 18 65 6.36e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG006426 AT4G21430.1 36.794 867 434 21 25 849 123 917 1.17e-164 503
MsaG006426 AT4G00990.1 35.025 788 430 21 106 843 73 828 2.03e-138 432
MsaG006426 AT1G62310.1 34.557 790 405 18 78 833 172 883 9.03e-128 405
MsaG006426 AT4G00990.3 34.290 732 399 21 106 787 73 772 6.95e-118 376
MsaG006426 AT4G00990.2 34.384 730 397 21 106 785 73 770 7.78e-118 376
MsaG006426 AT1G09060.2 30.495 869 469 27 38 851 109 897 2.96e-100 333
MsaG006426 AT1G09060.1 30.495 869 469 27 38 851 109 897 2.96e-100 333
MsaG006426 AT1G09060.4 30.495 869 469 27 38 851 123 911 3.62e-100 333
MsaG006426 AT1G09060.3 30.495 869 469 27 38 851 123 911 3.62e-100 333
MsaG006426 AT1G11950.2 33.395 542 323 12 113 634 193 716 1.81e-77 268
MsaG006426 AT1G11950.2 57.500 80 34 0 698 777 722 801 2.58e-20 97.1
MsaG006426 AT1G11950.1 33.395 542 323 12 113 634 193 716 4.75e-77 268
MsaG006426 AT1G11950.1 54.110 146 67 0 698 843 722 867 5.80e-45 175
MsaG006426 AT1G11950.3 33.395 542 323 12 113 634 193 716 4.75e-77 268
MsaG006426 AT1G11950.3 54.110 146 67 0 698 843 722 867 5.80e-45 175
MsaG006426 AT3G07610.1 33.650 526 260 12 343 843 429 890 4.27e-75 265
MsaG006426 AT3G07610.1 31.515 165 110 3 113 276 155 317 2.29e-18 90.9
MsaG006426 AT3G07610.3 32.955 528 283 13 343 843 429 912 2.49e-70 252
MsaG006426 AT3G07610.3 31.515 165 110 3 113 276 155 317 2.07e-18 91.3
MsaG006426 AT3G07610.2 31.461 267 150 8 343 584 429 687 7.91e-26 114
MsaG006426 AT3G07610.2 31.515 165 110 3 113 276 155 317 4.98e-18 89.7

Find 151 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATGAAGTTCCTGAAATTT+TGG 0.135711 2:+5296419 MsaT006426.1:CDS
TCTAGATCAGAGCATCTTTC+TGG 0.167659 2:+5298563 MsaT006426.1:CDS
GTGATTCCAGGTTAATATTA+TGG 0.205887 2:+5297998 MsaT006426.1:intron
GACCCTTCTATCAACATTCT+TGG 0.288257 2:-5294587 None:intergenic
AGACTTACTTGAAGCTTGTT+TGG 0.301685 2:+5296727 MsaT006426.1:CDS
CCATATGTATACATTTCTTA+TGG 0.304239 2:+5297277 MsaT006426.1:CDS
TAGCAAGTTCAATCATGTTT+TGG 0.316293 2:-5299317 None:intergenic
GACTGAGTTACCTGACAAAA+TGG 0.323753 2:+5296161 MsaT006426.1:CDS
AAATGCTCTTGTCTTCTAAA+AGG 0.324737 2:-5296209 None:intergenic
ATTTCTTCGATCCAGCTTAT+CGG 0.342412 2:-5296366 None:intergenic
CATGAGACGCTGAAACTAAA+TGG 0.343510 2:+5297097 MsaT006426.1:CDS
TTGTTACACCACCTTACTTC+AGG 0.344307 2:+5294563 MsaT006426.1:CDS
GAAACTGTTCTTTGAATAGT+TGG 0.351565 2:-5297132 None:intergenic
GGCTCTTCATAGCATGGATA+TGG 0.356860 2:+5299262 MsaT006426.1:CDS
TTGCTCAGTGGGATGTCTTC+CGG 0.358224 2:+5298357 MsaT006426.1:CDS
AAGATGCTCTGATCTAGAAT+TGG 0.360917 2:-5298558 None:intergenic
ATGAAAACAGGTGAAGAAAA+TGG 0.371127 2:+5299241 MsaT006426.1:intron
TTTGGTCTGTATGCTCCTTC+CGG 0.375126 2:+5295707 MsaT006426.1:CDS
AGAATTGCCCAATGGGGTTA+TGG 0.377287 2:+5294465 MsaT006426.1:CDS
GACGTTTGCACCGCCATTGT+CGG 0.389619 2:-5294108 None:intergenic
CTGGATGTCCATACCAGATT+AGG 0.389865 2:+5298761 MsaT006426.1:CDS
GGTCCAAGAATGTTGATAGA+AGG 0.390687 2:+5294584 MsaT006426.1:CDS
GATATCAGACCTTACTTTCA+CGG 0.390688 2:-5295550 None:intergenic
AACTGATACGTCAATGTTGC+TGG 0.394642 2:+5296245 MsaT006426.1:CDS
GAACAAGTTCCTCGACAAAC+TGG 0.395372 2:-5295494 None:intergenic
ATGAGACTGAAGGAGGAGTT+TGG 0.403179 2:+5298600 MsaT006426.1:CDS
CCATAAGAAATGTATACATA+TGG 0.404527 2:-5297277 None:intergenic
AGACCTTAGAATTCCTAATC+TGG 0.404706 2:-5298774 None:intergenic
TACTTGAAGCTTGTTTGGAT+TGG 0.411244 2:+5296732 MsaT006426.1:CDS
TGCAGAAGACGCGGAACAAA+AGG 0.411789 2:+5298124 MsaT006426.1:CDS
AGAACCACATTCTCCATTGC+TGG 0.416045 2:-5298261 None:intergenic
GATGGATCTCATCGGTCAAT+TGG 0.419978 2:-5299074 None:intergenic
GGAGAATTTATATGCTCAAA+GGG 0.425573 2:-5296135 None:intergenic
TCACGACGTGAAGTCGAAAC+AGG 0.425913 2:-5294496 None:intergenic
CCTTCAGAGCTAGGTGGTTG+TGG 0.433804 2:+5296312 MsaT006426.1:CDS
CCCACTTGAAAATTATCATA+AGG 0.434928 2:-5294610 None:intergenic
GATAAGCTGGATCGAAGAAA+TGG 0.436682 2:+5296368 MsaT006426.1:CDS
TTGAGGTATTCTAAAAGCTT+CGG 0.437209 2:-5298392 None:intergenic
CAACGAGTATGACAGCAATA+AGG 0.437898 2:+5298442 MsaT006426.1:CDS
TTGAAGCTTGTTTGGATTGG+TGG 0.446072 2:+5296735 MsaT006426.1:CDS
AGCAATGGAGAATGTGGTTC+TGG 0.446783 2:+5298263 MsaT006426.1:CDS
GCACAGAACTCTGTGTCAAA+GGG 0.448957 2:+5298085 MsaT006426.1:CDS
TGTTCTGTGCTTATCTTGAA+AGG 0.451673 2:+5296678 MsaT006426.1:CDS
TGAGGAAAGAATTGCCCAAT+GGG 0.453383 2:+5294458 MsaT006426.1:CDS
AGAGCAGCAATACATGATAA+AGG 0.454792 2:+5297253 MsaT006426.1:CDS
GCCATTGTCGGCCGTCGGTA+CGG 0.461722 2:-5294096 None:intergenic
AATGTCCACCGGACCATCTC+CGG 0.464613 2:+5294068 None:intergenic
TTGTAACAGGATTGTTTGGC+TGG 0.465255 2:+5295648 MsaT006426.1:intron
GTATTGTGTTCAAGTGGTAT+TGG 0.466768 2:+5299017 MsaT006426.1:intron
ATACCAGATTAGGAATTCTA+AGG 0.467888 2:+5298771 MsaT006426.1:CDS
TTGTCAGGTAACTCAGTCAA+TGG 0.467994 2:-5296156 None:intergenic
CTGTTTCTAGCTCTGCATGC+TGG 0.468543 2:-5295752 None:intergenic
GTGTAAAGACCGTGAAAGTA+AGG 0.471686 2:+5295541 MsaT006426.1:CDS
GCAATTTCCATAACCCCATT+GGG 0.475334 2:-5294472 None:intergenic
AGATGCTCTGATCTAGAATT+GGG 0.475458 2:-5298557 None:intergenic
AGCAATTTCCATAACCCCAT+TGG 0.477634 2:-5294473 None:intergenic
CCTTCGCTTACAATACTCTC+TGG 0.479033 2:-5298149 None:intergenic
CAGTGCTTTGATCTGTCTTG+TGG 0.480515 2:-5298322 None:intergenic
CGGCTGCACCGGAGATGGTC+CGG 0.480955 2:-5294076 None:intergenic
GTAGGAGGAAGAAGTGTCAT+TGG 0.481387 2:+5294757 MsaT006426.1:CDS
ATAGACTGTAGGAACAGTTA+AGG 0.484995 2:-5296077 None:intergenic
TTAGAATTCCTAATCTGGTA+TGG 0.487915 2:-5298769 None:intergenic
CCACTTGAAAATTATCATAA+GGG 0.488219 2:-5294609 None:intergenic
AAAACTAAGTTGGGATCCTC+TGG 0.488482 2:+5296652 MsaT006426.1:CDS
GGCCGTCGGTACGGCTGCAC+CGG 0.494483 2:-5294087 None:intergenic
TGTGGTTCTCTGGAAGCAGA+TGG 0.496122 2:-5299092 None:intergenic
AAACTGTTCTTTGAATAGTT+GGG 0.497020 2:-5297131 None:intergenic
AGCACAGAACTCTGTGTCAA+AGG 0.497022 2:+5298084 MsaT006426.1:CDS
TCATGCCCTCCTTCAGAGCT+AGG 0.498248 2:+5296303 MsaT006426.1:CDS
GTGGGATGTCTTCCGGAGAC+AGG 0.500947 2:+5298364 MsaT006426.1:CDS
CTTATTGCTGTCATACTCGT+TGG 0.501448 2:-5298441 None:intergenic
TGAAGCTTGTTTGGATTGGT+GGG 0.502278 2:+5296736 MsaT006426.1:CDS
GAATACATGAATCCGAGGTT+CGG 0.506022 2:+5297196 MsaT006426.1:CDS
AATGTATTCTGTTGCTCAGT+GGG 0.508686 2:+5298346 MsaT006426.1:CDS
GTAAGATGTTCTGTAGAGAC+AGG 0.508727 2:-5298038 None:intergenic
CACTCAAAATGAGGTTAAGA+AGG 0.510187 2:+5295466 MsaT006426.1:CDS
CATAAGAAATGTATACATAT+GGG 0.512294 2:-5297276 None:intergenic
GGTCTTTACACTGACTTGCT+CGG 0.516495 2:-5295529 None:intergenic
CTTCTGTGAAGATTCAGAAT+AGG 0.519354 2:-5296051 None:intergenic
ACATTCTTGGACCTGAAGTA+AGG 0.520627 2:-5294574 None:intergenic
GAAGCTATCATCATTCCTGC+TGG 0.521605 2:+5298742 MsaT006426.1:CDS
CTGGTACAAGCAGAGTTGAT+AGG 0.525136 2:+5295667 MsaT006426.1:CDS
GTATTTCGACACTCAAAATG+AGG 0.531795 2:+5295457 MsaT006426.1:CDS
ATCATCTTCAACTTCAACAT+CGG 0.533036 2:+5294164 MsaT006426.1:CDS
AGCACGCCTCGGACTACTAC+AGG 0.534609 2:-5296620 None:intergenic
CGGTACGGCTGCACCGGAGA+TGG 0.535565 2:-5294081 None:intergenic
TGGAGAATTTATATGCTCAA+AGG 0.536643 2:-5296136 None:intergenic
ATTACTTCAGCAAAATGAGC+TGG 0.538244 2:-5297154 None:intergenic
CCACAACCACCTAGCTCTGA+AGG 0.546033 2:-5296312 None:intergenic
GCTTCGGTACATCCTGTCTC+CGG 0.550177 2:-5298376 None:intergenic
GAGAACAATACTTCCAGCAA+TGG 0.551966 2:+5298248 MsaT006426.1:CDS
GGATTCATGTATTCTTGAAG+TGG 0.553713 2:-5297187 None:intergenic
GAAAATGGCTCTTCATAGCA+TGG 0.555007 2:+5299256 MsaT006426.1:CDS
CTCCGGTGCAGCCGTACCGA+CGG 0.558644 2:+5294085 MsaT006426.1:CDS
TCAATGTTGCTGGATTCGAC+TGG 0.558744 2:+5296255 MsaT006426.1:CDS
GTCCAAGAATGTTGATAGAA+GGG 0.559262 2:+5294585 MsaT006426.1:CDS
TGGACGTTTGAGCAACATGT+TGG 0.562317 2:+5298718 MsaT006426.1:CDS
GCACCGCCATTGTCGGCCGT+CGG 0.566484 2:-5294101 None:intergenic
TAGAATACCTCAAAAGACAC+AGG 0.568733 2:+5298402 MsaT006426.1:CDS
ATTATAGTGAAGGTGAATTG+AGG 0.570035 2:+5294440 MsaT006426.1:intron
GATCGAAGAAATGGAAGCTA+AGG 0.571565 2:+5296377 MsaT006426.1:CDS
ATCTGGTATGGACATCCAGC+AGG 0.572299 2:-5298757 None:intergenic
CTTTGATCTGTCTTGTGGAA+AGG 0.572886 2:-5298317 None:intergenic
CAATTGATGTCGAAAACTGT+AGG 0.580782 2:-5296555 None:intergenic
ATTGACTCTCCTGTAAAAGT+CGG 0.580898 2:-5298174 None:intergenic
ACATGTTGCTCAAACGTCCA+TGG 0.584025 2:-5298715 None:intergenic
GCGGTGCAAACGTCGAGCGA+TGG 0.586207 2:+5294117 MsaT006426.1:CDS
ACTTCCAGCAATGGAGAATG+TGG 0.590983 2:+5298257 MsaT006426.1:CDS
GCCGTACCGACGGCCGACAA+TGG 0.594074 2:+5294095 MsaT006426.1:CDS
TACTCACAAAATGAGACTGA+AGG 0.605524 2:+5298590 MsaT006426.1:CDS
CTCTTATGACTCGTATGATG+TGG 0.606375 2:+5297336 MsaT006426.1:CDS
AGCTTGTTTGGATTGGTGGG+AGG 0.607427 2:+5296739 MsaT006426.1:CDS
GATACACTCAGCAACACTCT+CGG 0.607490 2:-5299052 None:intergenic
AGACGCTGAAACTAAATGGA+TGG 0.607729 2:+5297101 MsaT006426.1:CDS
AGCAAAAGTAGACAAGATTG+AGG 0.607925 2:+5299116 MsaT006426.1:CDS
TTAGCTGCAAATATGACAGA+GGG 0.613711 2:+5297229 MsaT006426.1:CDS
ACATCTTAAGCATAGACTGT+AGG 0.615809 2:-5296088 None:intergenic
TTGAGGAAAGAATTGCCCAA+TGG 0.623011 2:+5294457 MsaT006426.1:CDS
GCATGGATTGCATTAAACAA+CGG 0.627109 2:+5294841 MsaT006426.1:CDS
CCAGAGAGTATTGTAAGCGA+AGG 0.628849 2:+5298149 MsaT006426.1:CDS
GTACCGACGGCCGACAATGG+CGG 0.630524 2:+5294098 MsaT006426.1:CDS
ACTGCAATGAGAAAATTGAC+TGG 0.635322 2:+5295921 MsaT006426.1:CDS
TGGAAGCAGATGGATCTCAT+CGG 0.640711 2:-5299082 None:intergenic
CCTGCAGTATTGTGTTCAAG+TGG 0.641105 2:+5299011 MsaT006426.1:intron
AACCACCTAGCTCTGAAGGA+GGG 0.641948 2:-5296308 None:intergenic
TTCAAGAATACATGAATCCG+AGG 0.642282 2:+5297191 MsaT006426.1:CDS
AACGAAGGAAGAATGTCCAC+CGG 0.642524 2:+5294057 None:intergenic
CAACCACCTAGCTCTGAAGG+AGG 0.643011 2:-5296309 None:intergenic
TGCCCTCCTTCAGAGCTAGG+TGG 0.645107 2:+5296306 MsaT006426.1:CDS
CGCCTCGGACTACTACAGGA+TGG 0.646943 2:-5296616 None:intergenic
TGTTGTCAGACATTAAGTCA+AGG 0.648902 2:+5296108 MsaT006426.1:CDS
CACAGAACTCTGTGTCAAAG+GGG 0.648989 2:+5298086 MsaT006426.1:CDS
GCTCTCTTAAATATCAACCT+CGG 0.654056 2:+5297062 MsaT006426.1:CDS
GACTGAAAATGCAGAAGACG+CGG 0.655292 2:+5298115 MsaT006426.1:CDS
TCATTCCAGAAATCGAACCA+TGG 0.660202 2:+5298698 MsaT006426.1:intron
AGAATACCTCAAAAGACACA+GGG 0.667044 2:+5298403 MsaT006426.1:CDS
GAGAATTTATATGCTCAAAG+GGG 0.668555 2:-5296134 None:intergenic
AAATGTATTCTGTTGCTCAG+TGG 0.670307 2:+5298345 MsaT006426.1:CDS
TTTAGCTGCAAATATGACAG+AGG 0.672392 2:+5297228 MsaT006426.1:CDS
GGCCATCCTGTAGTAGTCCG+AGG 0.673561 2:+5296614 MsaT006426.1:intron
TGTAGAGACAGGAACATCTG+TGG 0.673825 2:-5298027 None:intergenic
ACATCGGCAGAAGAAAGTGA+AGG 0.675093 2:+5294180 MsaT006426.1:CDS
AAATTCAGAAGACCGAACCT+CGG 0.675191 2:-5297208 None:intergenic
TTCTTGGACCTGAAGTAAGG+TGG 0.676401 2:-5294571 None:intergenic
AAGGCGTGTCCAGTTTGTCG+AGG 0.678559 2:+5295485 MsaT006426.1:CDS
ACAGAACTCTGTGTCAAAGG+GGG 0.691218 2:+5298087 MsaT006426.1:CDS
TCACAAAATGAGACTGAAGG+AGG 0.693419 2:+5298593 MsaT006426.1:CDS
CTGCACCGGAGATGGTCCGG+TGG 0.701773 2:-5294073 None:intergenic
TAAGCACAGAACAAGACCAG+AGG 0.721315 2:-5296668 None:intergenic
GAGGAAAGAATTGCCCAATG+GGG 0.722744 2:+5294459 MsaT006426.1:CDS
TAGCTGCAAATATGACAGAG+GGG 0.735019 2:+5297230 MsaT006426.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr2 gene 5294069 5299331 5294069 ID=MsaG006426
Chr2 mRNA 5294069 5299331 5294069 ID=MsaT006426.1;Parent=MsaG006426
Chr2 exon 5294069 5294201 5294069 ID=MsaT006426.1.exon1;Parent=MsaT006426.1
Chr2 CDS 5294069 5294201 5294069 ID=cds.MsaT006426.1;Parent=MsaT006426.1
Chr2 exon 5294452 5294627 5294452 ID=MsaT006426.1.exon2;Parent=MsaT006426.1
Chr2 CDS 5294452 5294627 5294452 ID=cds.MsaT006426.1;Parent=MsaT006426.1
Chr2 exon 5294744 5294862 5294744 ID=MsaT006426.1.exon3;Parent=MsaT006426.1
Chr2 CDS 5294744 5294862 5294744 ID=cds.MsaT006426.1;Parent=MsaT006426.1
Chr2 exon 5295457 5295562 5295457 ID=MsaT006426.1.exon4;Parent=MsaT006426.1
Chr2 CDS 5295457 5295562 5295457 ID=cds.MsaT006426.1;Parent=MsaT006426.1
Chr2 exon 5295657 5295789 5295657 ID=MsaT006426.1.exon5;Parent=MsaT006426.1
Chr2 CDS 5295657 5295789 5295657 ID=cds.MsaT006426.1;Parent=MsaT006426.1
Chr2 exon 5295879 5295942 5295879 ID=MsaT006426.1.exon6;Parent=MsaT006426.1
Chr2 CDS 5295879 5295942 5295879 ID=cds.MsaT006426.1;Parent=MsaT006426.1
Chr2 exon 5296035 5296576 5296035 ID=MsaT006426.1.exon7;Parent=MsaT006426.1
Chr2 CDS 5296035 5296576 5296035 ID=cds.MsaT006426.1;Parent=MsaT006426.1
Chr2 exon 5296615 5296760 5296615 ID=MsaT006426.1.exon8;Parent=MsaT006426.1
Chr2 CDS 5296615 5296760 5296615 ID=cds.MsaT006426.1;Parent=MsaT006426.1
Chr2 exon 5297031 5297357 5297031 ID=MsaT006426.1.exon9;Parent=MsaT006426.1
Chr2 CDS 5297031 5297357 5297031 ID=cds.MsaT006426.1;Parent=MsaT006426.1
Chr2 exon 5298008 5298463 5298008 ID=MsaT006426.1.exon10;Parent=MsaT006426.1
Chr2 CDS 5298008 5298463 5298008 ID=cds.MsaT006426.1;Parent=MsaT006426.1
Chr2 exon 5298549 5298621 5298549 ID=MsaT006426.1.exon11;Parent=MsaT006426.1
Chr2 CDS 5298549 5298621 5298549 ID=cds.MsaT006426.1;Parent=MsaT006426.1
Chr2 exon 5298707 5298792 5298707 ID=MsaT006426.1.exon12;Parent=MsaT006426.1
Chr2 CDS 5298707 5298792 5298707 ID=cds.MsaT006426.1;Parent=MsaT006426.1
Chr2 exon 5299018 5299137 5299018 ID=MsaT006426.1.exon13;Parent=MsaT006426.1
Chr2 CDS 5299018 5299137 5299018 ID=cds.MsaT006426.1;Parent=MsaT006426.1
Chr2 exon 5299251 5299331 5299251 ID=MsaT006426.1.exon14;Parent=MsaT006426.1
Chr2 CDS 5299251 5299331 5299251 ID=cds.MsaT006426.1;Parent=MsaT006426.1
Gene Sequence

>MsaT006426.1

ATGTCCACCGGACCATCTCCGGTGCAGCCGTACCGACGGCCGACAATGGCGGTGCAAACGTCGAGCGATGGAAAACGTGAAGTTATGCGAAGTTCATCATCTTCAACTTCAACATCGGCAGAAGAAAGTGAAGGTGAATTGAGGAAAGAATTGCCCAATGGGGTTATGGAAATTGCTCCTGTTTCGACTTCACGTCGTGATGATGATGATGATGTTGTTGATTTTCACTGTAATGGTAAAGCTGTTGTTACACCACCTTACTTCAGGTCCAAGAATGTTGATAGAAGGGTCCCTTATGATAATTTTCAAGTTTTGAAGAAGTGTAGGAGGAAGAAGTGTCATTGGTGTCAGAGTAGTGATTCTTTGAATTTGATCAAGTGTAACAACTGCCAGAAAGAGTTTTTCTGCATGGATTGCATTAAACAACGGTATTTCGACACTCAAAATGAGGTTAAGAAGGCGTGTCCAGTTTGTCGAGGAACTTGTTCATGTAAAGATTGCCGAGCAAGTCAGTGTAAAGACCGTGAAAGTAAGGATTGTTTGGCTGGTACAAGCAGAGTTGATAGGATATTGCATTTTCATTATTTGGTCTGTATGCTCCTTCCGGTAATAAAACAAATAAGCGAAGACCAGCATGCAGAGCTAGAAACAGAAGCGAAAAATAAAGGGGAAAGTATTTCTGATATTCTCATCAAGCAAATCGAATTTGACTGCAATGAGAAAATTGACTGCAACTACTGCAAAACACCTATTCTGAATCTTCACAGAAGCTGCCTTAACTGTTCCTACAGTCTATGCTTAAGATGTTGTCAGACATTAAGTCAAGGAAGCCCCTTTGAGCATATAAATTCTCCATTGACTGAGTTACCTGACAAAATGGACACTTGCATTGCTGATGAAAGTTGCCTTTTAGAAGACAAGAGCATTTCTAGCGACAATGAAACTGATACGTCAATGTTGCTGGATTCGACTGGTTTTAACGGTACAACTGACAGTATATCATGCCCTCCTTCAGAGCTAGGTGGTTGTGGTAATGACAACCTTGATTTGAGATGTGTTTTTCCGATAAGCTGGATCGAAGAAATGGAAGCTAAGGCAGAAGAGATAGTTTGCAGCTATGAAGTTCCTGAAATTTTGGATAAAAACTCAAGTTGCTCACTTTGTATTGACAAAGATCATAAAACTAAGAGACATAAGCAATTTGAAGATGCTGCTCGAAGAGAAGATTCTAATGATAATTGCTTATTTTATCCTACAGTTTTCGACATCAATTGCCATCCTGTAGTAGTCCGAGGCGTGCTCAATGCGAAAAAACTAAGTTGGGATCCTCTGGTCTTGTTCTGTGCTTATCTTGAAAGGAGCATTGCAAGATATGAGAATAATAAAGACTTACTTGAAGCTTGTTTGGATTGGTGGGAGGTTGAAATTAACATTAGACAGCATTTTACTGGCTCTCTTAAATATCAACCTCGGAAAAATGATTGGCATGAGACGCTGAAACTAAATGGATGGTTATCTTCCCAACTATTCAAAGAACAGTTTCCAGCTCATTTTGCTGAAGTAATTGGTGCTCTTCCACTTCAAGAATACATGAATCCGAGGTTCGGTCTTCTGAATTTAGCTGCAAATATGACAGAGGGGAGAGCAGCAATACATGATAAAGGCCCATATGTATACATTTCTTATGGCTGTGCTGACAACAAAGCTTATTCTGTGCTAAATCTCTCTTATGACTCGTATGATGTGGTTAATATTATGGTTTATACCACAGATGTTCCTGTCTCTACAGAACATCTTACTAAAATAACTAAGTTATTGAAGAAGCACAGAACTCTGTGTCAAAGGGGGTCACCGACTGAAAATGCAGAAGACGCGGAACAAAAGGAACCAGAGAGTATTGTAAGCGAAGGAACCGACTTTTACAGGAGAGTCAATAGAACATCTTACATCTCTACTGAAGTGAAAGCAATAGCTAGTCAAAGTTTAGAGAACAATACTTCCAGCAATGGAGAATGTGGTTCTGGTTCTGATGCTGAAAAAACAGAAAGCTCTTTACCTTTCCACAAGACAGATCAAAGCACTGAAATGTATTCTGTTGCTCAGTGGGATGTCTTCCGGAGACAGGATGTACCGAAGCTTTTAGAATACCTCAAAAGACACAGGGATGAATTTTCTTTTACCAACGAGTATGACAGCAATAAGATAGTTCACCCAATTCTAGATCAGAGCATCTTTCTGGACAATACTCACAAAATGAGACTGAAGGAGGAGTTTGAAATCGAACCATGGACGTTTGAGCAACATGTTGGAGAAGCTATCATCATTCCTGCTGGATGTCCATACCAGATTAGGAATTCTAAGTATTGTGTTCAAGTGGTATTGGAATTTATGTCTTCCGAGAGTGTTGCTGAGTGTATCCAATTGACCGATGAGATCCATCTGCTTCCAGAGAACCACAAAGCAAAAGTAGACAAGATTGAGGTGAAGAAAATGGCTCTTCATAGCATGGATATGGCGATAAAAGAAATCTGCGAGCTCACTTCCAATCCAAAACATGATTGA

Protein sequence

>MsaT006426.1

MSTGPSPVQPYRRPTMAVQTSSDGKREVMRSSSSSTSTSAEESEGELRKELPNGVMEIAPVSTSRRDDDDDVVDFHCNGKAVVTPPYFRSKNVDRRVPYDNFQVLKKCRRKKCHWCQSSDSLNLIKCNNCQKEFFCMDCIKQRYFDTQNEVKKACPVCRGTCSCKDCRASQCKDRESKDCLAGTSRVDRILHFHYLVCMLLPVIKQISEDQHAELETEAKNKGESISDILIKQIEFDCNEKIDCNYCKTPILNLHRSCLNCSYSLCLRCCQTLSQGSPFEHINSPLTELPDKMDTCIADESCLLEDKSISSDNETDTSMLLDSTGFNGTTDSISCPPSELGGCGNDNLDLRCVFPISWIEEMEAKAEEIVCSYEVPEILDKNSSCSLCIDKDHKTKRHKQFEDAARREDSNDNCLFYPTVFDINCHPVVVRGVLNAKKLSWDPLVLFCAYLERSIARYENNKDLLEACLDWWEVEINIRQHFTGSLKYQPRKNDWHETLKLNGWLSSQLFKEQFPAHFAEVIGALPLQEYMNPRFGLLNLAANMTEGRAAIHDKGPYVYISYGCADNKAYSVLNLSYDSYDVVNIMVYTTDVPVSTEHLTKITKLLKKHRTLCQRGSPTENAEDAEQKEPESIVSEGTDFYRRVNRTSYISTEVKAIASQSLENNTSSNGECGSGSDAEKTESSLPFHKTDQSTEMYSVAQWDVFRRQDVPKLLEYLKRHRDEFSFTNEYDSNKIVHPILDQSIFLDNTHKMRLKEEFEIEPWTFEQHVGEAIIIPAGCPYQIRNSKYCVQVVLEFMSSESVAECIQLTDEIHLLPENHKAKVDKIEVKKMALHSMDMAIKEICELTSNPKHD*