AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG006428


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG006428 MtrunA17_Chr2g0281071 80.297 269 24 6 1 267 1 242 1.27e-125 361
MsaG006428 MtrunA17_Chr4g0048511 83.333 192 29 3 1 191 1 190 5.62e-108 317
MsaG006428 MtrunA17_Chr2g0323411 73.232 198 40 6 1 188 1 195 1.66e-94 281
MsaG006428 MtrunA17_Chr7g0217741 75.373 134 32 1 1 134 1 133 7.40e-76 233
MsaG006428 MtrunA17_Chr3g0115821 74.627 134 33 1 1 134 1 133 7.29e-75 232
MsaG006428 MtrunA17_Chr6g0453471 73.913 138 35 1 1 138 1 137 2.07e-74 231
MsaG006428 MtrunA17_Chr5g0410961 71.523 151 39 2 1 148 1 150 4.31e-74 230
MsaG006428 MtrunA17_Chr4g0042671 76.515 132 30 1 1 132 1 131 7.14e-74 231
MsaG006428 MtrunA17_Chr4g0039971 69.388 147 44 1 1 147 2 147 1.10e-73 229
MsaG006428 MtrunA17_Chr5g0395281 48.627 255 105 6 1 242 1 242 2.03e-69 217
MsaG006428 MtrunA17_Chr8g0349261 72.308 130 35 1 1 129 1 130 7.65e-68 213
MsaG006428 MtrunA17_Chr4g0037141 72.868 129 34 1 1 129 1 128 3.94e-66 207
MsaG006428 MtrunA17_Chr3g0103281 67.164 134 43 1 1 134 1 133 7.84e-64 203
MsaG006428 MtrunA17_Chr4g0057031 68.992 129 39 1 1 129 1 128 8.77e-63 199
MsaG006428 MtrunA17_Chr3g0131121 59.375 160 63 2 1 159 1 159 6.20e-62 197
MsaG006428 MtrunA17_Chr8g0385321 67.442 129 41 1 1 129 1 128 9.72e-62 197
MsaG006428 MtrunA17_Chr5g0434571 69.767 129 38 1 1 129 37 164 4.14e-61 197
MsaG006428 MtrunA17_Chr6g0452271 62.143 140 51 2 1 139 1 139 4.36e-61 196
MsaG006428 MtrunA17_Chr1g0203411 71.795 117 32 1 1 117 1 116 4.51e-61 195
MsaG006428 MtrunA17_Chr5g0435101 67.200 125 40 1 3 127 2 125 4.91e-61 192
MsaG006428 MtrunA17_Chr1g0167691 72.881 118 31 1 1 118 1 117 6.23e-61 193
MsaG006428 MtrunA17_Chr3g0110351 70.866 127 36 1 1 127 1 126 8.18e-61 195
MsaG006428 MtrunA17_Chr1g0187761 72.650 117 31 1 1 117 1 116 1.35e-60 192
MsaG006428 MtrunA17_Chr7g0274581 68.376 117 36 1 1 117 1 116 1.61e-60 191
MsaG006428 MtrunA17_Chr7g0261281 73.504 117 30 1 1 117 1 116 2.31e-60 192
MsaG006428 MtrunA17_Chr1g0167661 72.034 118 32 1 1 118 1 117 5.87e-60 191
MsaG006428 MtrunA17_Chr5g0417821 69.748 119 36 0 12 130 6 124 4.11e-59 190
MsaG006428 MtrunA17_Chr3g0121241 67.200 125 40 1 5 129 35 158 5.52e-59 190
MsaG006428 MtrunA17_Chr4g0068061 48.148 216 86 6 1 206 1 200 4.56e-58 189
MsaG006428 MtrunA17_Chr7g0228891 65.891 129 43 1 1 129 1 128 5.00e-58 186
MsaG006428 MtrunA17_Chr7g0270891 65.891 129 43 1 1 129 1 128 5.55e-58 189
MsaG006428 MtrunA17_Chr1g0193371 65.891 129 43 1 1 129 1 128 8.05e-58 189
MsaG006428 MtrunA17_Chr1g0193801 65.116 129 44 1 1 129 1 128 1.18e-57 189
MsaG006428 MtrunA17_Chr7g0275911 70.085 117 34 1 1 117 1 116 4.00e-57 184
MsaG006428 MtrunA17_Chr8g0346561 69.748 119 35 1 1 119 1 118 4.81e-57 185
MsaG006428 MtrunA17_Chr4g0058631 62.791 129 47 1 1 129 1 128 8.68e-57 186
MsaG006428 MtrunA17_Chr4g0022931 60.150 133 53 0 1 133 1 133 3.09e-56 182
MsaG006428 MtrunA17_Chr2g0323351 69.748 119 35 1 1 119 1 118 5.21e-56 181
MsaG006428 MtrunA17_Chr1g0211161 59.848 132 53 0 1 132 1 132 7.28e-56 179
MsaG006428 MtrunA17_Chr4g0022911 64.407 118 42 0 1 118 1 118 1.54e-55 181
MsaG006428 MtrunA17_Chr4g0022901 65.254 118 41 0 1 118 1 118 2.17e-55 180
MsaG006428 MtrunA17_Chr7g0254411 66.667 126 39 2 1 124 1 125 3.68e-55 181
MsaG006428 MtrunA17_Chr3g0117091 60.606 132 51 1 1 132 1 131 4.49e-55 181
MsaG006428 MtrunA17_Chr2g0311221 72.072 111 30 1 2 112 4 113 5.13e-55 181
MsaG006428 MtrunA17_Chr4g0044421 63.492 126 46 0 3 128 2 127 5.78e-55 176
MsaG006428 MtrunA17_Chr4g0070611 67.521 117 37 1 1 117 1 116 2.19e-54 178
MsaG006428 MtrunA17_Chr7g0271241 65.116 129 44 1 1 129 1 128 3.96e-54 179
MsaG006428 MtrunA17_Chr4g0070641 67.521 117 37 1 1 117 1 116 4.87e-54 173
MsaG006428 MtrunA17_Chr2g0309911 63.115 122 44 1 6 127 5 125 6.63e-54 177
MsaG006428 MtrunA17_Chr4g0060721 65.812 117 39 1 1 117 2 117 1.31e-53 177
MsaG006428 MtrunA17_Chr7g0217221 65.546 119 40 1 1 119 1 118 1.51e-53 175
MsaG006428 MtrunA17_Chr1g0194951 61.069 131 50 1 1 131 1 130 1.79e-53 177
MsaG006428 MtrunA17_Chr3g0092401 65.833 120 40 1 1 120 2 120 3.01e-53 175
MsaG006428 MtrunA17_Chr8g0387421 63.025 119 43 1 1 119 1 118 3.76e-51 170
MsaG006428 MtrunA17_Chr8g0342521 60.484 124 48 1 1 124 1 123 9.85e-51 170
MsaG006428 MtrunA17_Chr7g0264641 61.983 121 44 2 1 120 1 120 1.02e-50 167
MsaG006428 MtrunA17_Chr8g0342541 41.129 248 123 7 1 235 1 238 1.87e-50 169
MsaG006428 MtrunA17_Chr2g0330041 56.028 141 55 2 1 141 1 134 2.35e-50 170
MsaG006428 MtrunA17_Chr1g0151941 60.504 119 45 2 1 118 1 118 2.83e-50 166
MsaG006428 MtrunA17_Chr4g0032401 65.789 114 39 0 10 123 14 127 3.62e-50 168
MsaG006428 MtrunA17_Chr4g0028311 59.542 131 50 3 1 130 1 129 7.17e-50 167
MsaG006428 MtrunA17_Chr5g0397231 65.766 111 37 1 1 111 1 110 2.33e-49 166
MsaG006428 MtrunA17_Chr6g0453211 65.179 112 38 1 1 112 1 111 3.44e-49 165
MsaG006428 MtrunA17_Chr3g0135311 50.299 167 75 3 1 166 1 160 4.67e-49 166
MsaG006428 MtrunA17_Chr5g0400821 62.185 119 43 2 1 118 1 118 1.11e-48 164
MsaG006428 MtrunA17_Chr2g0328771 66.667 105 35 0 13 117 20 124 1.89e-48 163
MsaG006428 MtrunA17_Chr1g0152011 62.185 119 43 2 1 118 1 118 1.91e-48 164
MsaG006428 MtrunA17_Chr2g0327351 56.863 153 59 5 1 150 1 149 5.24e-48 162
MsaG006428 MtrunA17_Chr4g0022881 60.870 115 44 1 1 115 1 114 1.09e-47 159
MsaG006428 MtrunA17_Chr4g0022891 63.158 114 41 1 1 114 1 113 1.27e-47 159
MsaG006428 MtrunA17_Chr7g0269831 66.667 117 38 1 1 117 1 116 1.84e-47 162
MsaG006428 MtrunA17_Chr3g0088461 67.619 105 34 0 13 117 22 126 2.56e-47 161
MsaG006428 MtrunA17_Chr1g0203441 60.504 119 47 0 1 119 1 119 4.24e-47 158
MsaG006428 MtrunA17_Chr4g0055981 60.169 118 47 0 13 130 55 172 1.55e-46 155
MsaG006428 MtrunA17_Chr3g0099131 66.346 104 35 0 13 116 41 144 3.02e-46 162
MsaG006428 MtrunA17_Chr4g0054391 63.964 111 38 2 1 110 1 110 1.22e-45 155
MsaG006428 MtrunA17_Chr8g0342481 39.759 249 120 10 1 241 1 227 2.70e-45 157
MsaG006428 MtrunA17_Chr1g0209661 48.765 162 72 2 7 158 21 181 3.16e-44 152
MsaG006428 MtrunA17_Chr3g0080861 60.000 110 43 1 13 122 37 145 4.83e-44 156
MsaG006428 MtrunA17_Chr4g0042611 73.034 89 23 1 1 89 1 88 6.06e-44 144
MsaG006428 MtrunA17_Chr6g0470971 43.750 192 89 5 14 202 15 190 8.44e-44 150
MsaG006428 MtrunA17_Chr7g0247131 73.034 89 24 0 45 133 10 98 9.59e-44 149
MsaG006428 MtrunA17_Chr8g0354661 62.500 104 39 0 13 116 37 140 2.25e-43 155
MsaG006428 MtrunA17_Chr4g0072751 61.607 112 41 2 1 111 1 111 2.69e-43 150
MsaG006428 MtrunA17_Chr7g0228231 57.627 118 49 1 1 117 1 118 2.94e-43 146
MsaG006428 MtrunA17_Chr8g0343831 63.107 103 38 0 15 117 10 112 3.24e-43 148
MsaG006428 MtrunA17_Chr1g0186061 61.165 103 40 0 14 116 21 123 4.74e-43 147
MsaG006428 MtrunA17_Chr1g0154031 60.577 104 41 0 13 116 76 179 7.57e-43 151
MsaG006428 MtrunA17_Chr6g0450101 56.780 118 50 1 1 117 1 118 1.24e-42 145
MsaG006428 MtrunA17_Chr1g0168661 61.165 103 40 0 14 116 22 124 1.50e-42 146
MsaG006428 MtrunA17_Chr1g0194291 56.897 116 50 0 8 123 16 131 1.67e-42 146
MsaG006428 MtrunA17_Chr6g0487491 54.331 127 48 3 1 118 1 126 3.04e-42 145
MsaG006428 MtrunA17_Chr5g0434831 58.559 111 46 0 8 118 2 112 3.57e-42 143
MsaG006428 MtrunA17_Chr5g0434931 55.856 111 49 0 8 118 30 140 5.50e-42 145
MsaG006428 MtrunA17_Chr5g0434911 56.364 110 48 0 9 118 17 126 2.44e-41 144
MsaG006428 MtrunA17_Chr2g0322521 63.810 105 38 0 12 116 28 132 3.47e-41 146
MsaG006428 MtrunA17_Chr1g0180391 60.952 105 41 0 13 117 19 123 9.93e-41 140
MsaG006428 MtrunA17_Chr1g0194301 54.054 111 51 0 13 123 33 143 2.85e-40 141
MsaG006428 MtrunA17_Chr7g0240821 61.386 101 39 0 17 117 5 105 4.03e-40 139
MsaG006428 MtrunA17_Chr7g0220341 57.798 109 44 1 12 118 24 132 7.82e-40 139
MsaG006428 MtrunA17_Chr5g0434841 56.757 111 48 0 8 118 15 125 8.12e-40 140
MsaG006428 MtrunA17_Chr5g0395221 75.949 79 19 0 11 89 10 88 9.45e-40 133
MsaG006428 MtrunA17_Chr7g0228991 55.140 107 48 0 12 118 28 134 1.94e-38 136
MsaG006428 MtrunA17_Chr2g0293911 58.559 111 46 0 13 123 24 134 2.59e-38 137
MsaG006428 MtrunA17_Chr8g0360111 55.660 106 47 0 8 113 20 125 2.92e-38 135
MsaG006428 MtrunA17_Chr2g0323321 64.516 93 31 1 1 93 1 91 3.74e-38 130
MsaG006428 MtrunA17_Chr4g0068921 58.333 108 45 0 8 115 19 126 5.56e-38 132
MsaG006428 MtrunA17_Chr2g0294811 63.441 93 33 1 1 93 1 92 9.19e-38 129
MsaG006428 MtrunA17_Chr5g0440781 53.097 113 51 2 14 125 13 124 1.25e-37 131
MsaG006428 MtrunA17_Chr5g0440761 53.571 112 50 2 14 124 13 123 4.40e-37 132
MsaG006428 MtrunA17_Chr5g0441141 53.097 113 51 2 14 125 13 124 4.52e-37 132
MsaG006428 MtrunA17_Chr2g0327821 54.808 104 47 0 13 116 6 109 7.25e-37 130
MsaG006428 MtrunA17_Chr1g0192411 35.484 217 108 4 13 198 12 227 1.31e-36 134
MsaG006428 MtrunA17_Chr4g0030881 53.636 110 44 1 14 116 8 117 6.45e-36 129
MsaG006428 MtrunA17_Chr5g0441131 50.833 120 57 2 14 132 10 128 3.24e-35 125
MsaG006428 MtrunA17_Chr3g0099141 62.651 83 31 0 13 95 40 122 5.88e-35 123
MsaG006428 MtrunA17_Chr8g0342511 62.500 88 32 1 1 88 1 87 1.38e-34 120
MsaG006428 MtrunA17_Chr8g0334881 51.376 109 51 2 13 120 10 117 3.31e-34 126
MsaG006428 MtrunA17_Chr8g0342461 59.341 91 35 2 1 90 1 90 4.37e-32 115
MsaG006428 MtrunA17_Chr8g0342531 57.778 90 37 1 1 90 1 89 5.50e-32 116
MsaG006428 MtrunA17_Chr4g0013361 50.000 108 52 2 13 119 10 116 7.97e-32 119
MsaG006428 MtrunA17_Chr8g0342471 59.341 91 35 2 1 90 1 90 9.32e-32 114
MsaG006428 MtrunA17_Chr6g0454921 48.276 116 59 1 15 130 15 129 6.49e-31 114
MsaG006428 MtrunA17_Chr5g0401731 48.624 109 55 1 15 123 15 122 2.13e-30 116
MsaG006428 MtrunA17_Chr4g0008551 48.673 113 53 2 15 127 38 145 3.21e-29 113
MsaG006428 MtrunA17_Chr3g0093811 49.000 100 48 1 38 134 4 103 4.44e-29 111
MsaG006428 MtrunA17_Chr5g0429661 43.966 116 64 1 1 116 108 222 1.19e-28 112
MsaG006428 MtrunA17_Chr7g0238631 49.074 108 54 1 10 117 108 214 1.61e-28 114
MsaG006428 MtrunA17_Chr3g0133601 49.020 102 51 1 15 116 37 137 1.89e-28 108
MsaG006428 MtrunA17_Chr6g0453751 52.128 94 36 2 10 94 17 110 2.40e-27 103
MsaG006428 MtrunA17_Chr4g0053431 49.020 102 51 1 15 116 5 105 2.93e-27 106
MsaG006428 MtrunA17_Chr7g0229101 64.286 70 25 0 45 114 4 73 9.17e-27 103
MsaG006428 MtrunA17_Chr3g0117511 48.039 102 52 1 15 116 183 283 1.50e-26 107
MsaG006428 MtrunA17_Chr7g0229131 58.904 73 30 0 46 118 5 77 2.71e-26 101
MsaG006428 MtrunA17_Chr4g0058991 45.217 115 60 2 3 116 197 309 3.39e-26 107
MsaG006428 MtrunA17_Chr5g0397841 39.103 156 87 2 10 165 105 252 7.64e-26 105
MsaG006428 MtrunA17_Chr3g0139671 43.519 108 60 1 10 117 80 186 2.11e-25 105
MsaG006428 MtrunA17_Chr3g0139671 37.000 100 61 2 15 113 33 131 3.31e-13 69.7
MsaG006428 MtrunA17_Chr1g0157731 45.714 105 56 1 13 117 89 192 2.64e-25 105
MsaG006428 MtrunA17_Chr5g0425591 53.659 82 37 1 14 94 10 91 4.30e-25 95.9
MsaG006428 MtrunA17_Chr5g0434901 61.765 68 26 0 47 114 7 74 6.02e-25 96.3
MsaG006428 MtrunA17_Chr7g0228531 46.296 108 56 2 9 116 214 319 9.98e-25 102
MsaG006428 MtrunA17_Chr6g0480581 42.735 117 62 2 15 127 4 119 3.59e-24 97.8
MsaG006428 MtrunA17_Chr5g0437321 43.396 106 59 1 8 113 12 116 5.88e-24 98.2
MsaG006428 MtrunA17_Chr6g0460661 41.935 124 68 3 9 131 10 130 5.96e-24 95.1
MsaG006428 MtrunA17_Chr4g0042501 46.078 102 54 1 15 116 105 205 7.77e-23 97.1
MsaG006428 MtrunA17_Chr5g0417621 36.842 152 79 3 8 143 123 273 1.46e-22 96.7
MsaG006428 MtrunA17_Chr7g0228401 49.438 89 44 1 26 114 290 377 5.23e-22 95.1
MsaG006428 MtrunA17_Chr7g0228481 35.714 154 94 4 9 162 214 362 1.10e-21 94.0
MsaG006428 MtrunA17_Chr1g0177901 47.191 89 46 1 26 114 5 92 8.63e-21 87.8
MsaG006428 MtrunA17_Chr6g0460671 41.026 117 67 2 15 131 99 213 1.20e-20 90.1
MsaG006428 MtrunA17_Chr3g0125801 42.105 114 63 2 4 116 5 116 2.87e-20 88.2
MsaG006428 MtrunA17_Chr5g0395231 56.452 62 27 0 79 140 5 66 2.57e-19 84.7
MsaG006428 MtrunA17_Chr7g0254261 44.118 102 56 1 15 116 89 189 2.82e-19 86.3
MsaG006428 MtrunA17_Chr7g0233061 39.130 115 49 2 15 120 180 282 2.57e-18 83.6
MsaG006428 MtrunA17_Chr7g0238651 34.127 126 75 2 18 135 10 135 2.72e-18 83.6
MsaG006428 MtrunA17_Chr1g0193901 55.738 61 26 1 10 69 8 68 5.62e-18 77.8
MsaG006428 MtrunA17_Chr1g0193891 55.738 61 26 1 10 69 8 68 5.62e-18 77.8
MsaG006428 MtrunA17_Chr1g0193871 55.738 61 26 1 10 69 8 68 5.62e-18 77.8
MsaG006428 MtrunA17_Chr1g0193881 55.738 61 26 1 10 69 8 68 5.62e-18 77.8
MsaG006428 MtrunA17_Chr5g0416341 39.394 99 59 1 18 116 29 126 1.90e-16 79.0
MsaG006428 MtrunA17_Chr4g0042621 72.727 44 12 0 89 132 14 57 2.79e-16 77.8
MsaG006428 MtrunA17_Chr7g0247141 64.583 48 15 2 1 47 1 47 7.73e-16 70.5
MsaG006428 MtrunA17_Chr3g0145551 78.378 37 8 0 93 129 2 38 8.39e-15 68.2
MsaG006428 MtrunA17_Chr8g0362231 37.374 99 61 1 18 116 25 122 9.84e-15 73.9
MsaG006428 MtrunA17_Chr5g0434871 56.818 44 19 0 75 118 2 45 2.80e-14 66.6
MsaG006428 MtrunA17_Chr3g0104491 37.313 67 38 1 54 116 1 67 9.94e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG006428 AT4G21440.1 76.119 201 42 2 1 196 1 200 3.43e-108 317
MsaG006428 AT4G05100.1 64.341 258 65 5 1 231 1 258 7.39e-100 295
MsaG006428 AT4G28110.1 86.923 130 16 1 1 130 1 129 3.01e-83 251
MsaG006428 AT5G54230.1 67.742 186 53 4 13 195 12 193 2.46e-79 243
MsaG006428 AT5G16770.4 63.536 181 65 1 1 181 1 180 5.48e-79 242
MsaG006428 AT5G16770.3 63.536 181 65 1 1 181 1 180 5.48e-79 242
MsaG006428 AT5G16770.1 63.536 181 65 1 1 181 1 180 1.46e-78 241
MsaG006428 AT5G16770.2 63.536 181 65 1 1 181 1 180 1.46e-78 241
MsaG006428 AT3G02940.2 77.206 136 30 1 1 136 1 135 1.76e-76 235
MsaG006428 AT3G02940.1 77.206 136 30 1 1 136 1 135 4.70e-76 234
MsaG006428 AT3G02940.3 77.206 136 30 1 1 136 1 135 4.70e-76 234
MsaG006428 AT1G34670.1 76.866 134 30 1 1 134 1 133 6.18e-75 233
MsaG006428 AT3G01140.2 58.128 203 68 5 1 201 1 188 4.12e-74 230
MsaG006428 AT5G15310.1 51.528 229 101 4 1 222 1 226 7.83e-74 229
MsaG006428 AT5G15310.4 74.615 130 32 1 1 130 1 129 1.27e-73 226
MsaG006428 AT5G15310.2 51.802 222 100 3 1 222 1 215 1.61e-73 228
MsaG006428 AT4G17785.2 67.568 148 44 1 1 144 1 148 2.48e-73 228
MsaG006428 AT4G17785.1 67.568 148 44 1 1 144 1 148 4.05e-73 228
MsaG006428 AT5G10280.1 69.014 142 43 1 1 142 1 141 1.54e-71 223
MsaG006428 AT3G01140.1 57.500 200 68 5 4 201 47 231 7.91e-71 223
MsaG006428 AT5G65230.1 71.970 132 36 1 1 132 1 131 5.91e-69 216
MsaG006428 AT3G61250.1 72.868 129 34 1 1 129 1 128 1.82e-68 214
MsaG006428 AT4G34990.1 72.093 129 35 1 1 129 1 128 1.86e-67 211
MsaG006428 AT1G18570.1 72.441 127 35 0 1 127 1 127 2.44e-66 211
MsaG006428 AT1G74080.1 68.841 138 42 1 1 138 1 137 1.70e-65 208
MsaG006428 AT1G22640.1 54.872 195 74 4 1 193 1 183 2.03e-65 205
MsaG006428 AT4G38620.1 70.543 129 37 1 1 129 1 128 3.41e-65 206
MsaG006428 AT4G22680.1 72.093 129 35 1 1 129 1 128 7.02e-65 204
MsaG006428 AT2G16720.1 70.079 127 37 1 1 127 1 126 7.20e-65 204
MsaG006428 AT5G61420.2 70.543 129 37 1 1 129 1 128 9.19e-65 207
MsaG006428 AT5G60890.1 69.767 129 38 1 1 129 1 128 1.39e-64 204
MsaG006428 AT4G09460.1 70.866 127 36 1 1 127 1 126 6.62e-64 201
MsaG006428 AT5G07690.1 68.992 129 39 1 1 129 1 128 8.23e-64 204
MsaG006428 AT5G56110.1 68.992 129 39 1 1 129 1 128 3.04e-63 202
MsaG006428 AT5G07700.1 68.992 129 39 1 1 129 1 128 5.10e-63 202
MsaG006428 AT5G07700.2 68.992 129 39 1 1 129 1 128 5.10e-63 202
MsaG006428 AT1G35515.1 68.750 128 39 1 1 128 1 127 5.54e-63 197
MsaG006428 AT4G12350.1 68.992 129 39 1 1 129 1 128 8.69e-62 197
MsaG006428 AT1G66230.1 69.767 129 38 1 1 129 1 128 4.55e-61 195
MsaG006428 AT3G13540.1 67.460 126 40 1 4 129 15 139 4.65e-61 194
MsaG006428 AT5G16600.1 68.992 129 39 1 1 129 1 128 1.49e-60 195
MsaG006428 AT3G23250.1 71.795 117 32 1 1 117 1 116 9.27e-60 192
MsaG006428 AT5G26660.1 52.809 178 62 2 1 178 1 156 1.80e-59 193
MsaG006428 AT1G57560.1 64.341 129 45 1 1 129 1 128 2.51e-59 191
MsaG006428 AT1G57560.2 64.341 129 45 1 1 129 1 128 2.92e-59 190
MsaG006428 AT1G06180.1 72.650 117 31 1 1 117 1 116 3.31e-58 186
MsaG006428 AT2G31180.1 71.795 117 32 1 1 117 1 116 4.74e-58 186
MsaG006428 AT1G16490.1 50.521 192 75 5 2 174 4 194 1.47e-57 186
MsaG006428 AT1G09540.1 62.774 137 50 1 1 137 1 136 3.49e-57 187
MsaG006428 AT4G01680.3 65.354 127 43 1 1 127 1 126 1.64e-56 182
MsaG006428 AT3G28470.1 62.687 134 49 1 1 134 1 133 3.62e-56 183
MsaG006428 AT1G74430.1 62.016 129 48 1 1 129 1 128 4.23e-56 182
MsaG006428 AT5G14340.1 61.654 133 50 1 1 133 13 144 4.69e-56 182
MsaG006428 AT1G18710.1 62.016 129 48 1 1 129 1 128 5.10e-56 181
MsaG006428 AT1G79180.1 70.690 116 33 1 2 117 4 118 6.34e-56 182
MsaG006428 AT4G01680.1 65.354 127 43 1 1 127 1 126 8.30e-56 183
MsaG006428 AT5G62320.1 62.406 133 42 2 2 127 3 134 1.37e-55 180
MsaG006428 AT1G56160.1 70.690 116 33 1 2 117 4 118 1.66e-55 181
MsaG006428 AT3G62610.1 70.085 117 34 1 1 117 1 116 2.02e-55 182
MsaG006428 AT5G62470.2 65.833 120 40 1 1 120 1 119 1.02e-54 181
MsaG006428 AT1G08810.1 57.419 155 62 2 1 152 1 154 2.56e-54 177
MsaG006428 AT2G47460.1 68.376 117 36 1 1 117 1 116 4.61e-54 179
MsaG006428 AT1G74650.1 66.667 120 39 1 1 120 1 119 5.24e-54 178
MsaG006428 AT3G47600.1 65.000 120 41 1 1 120 1 119 5.79e-54 178
MsaG006428 AT5G49330.1 66.667 117 38 1 1 117 1 116 1.72e-53 177
MsaG006428 AT5G62470.1 65.833 120 39 2 1 120 1 118 7.55e-53 176
MsaG006428 AT3G12720.1 62.295 122 45 1 6 127 16 136 8.82e-53 174
MsaG006428 AT4G01680.2 59.712 139 43 2 1 127 1 138 2.61e-52 174
MsaG006428 AT3G28910.1 63.415 123 44 1 1 123 1 122 5.79e-52 173
MsaG006428 AT3G12820.1 64.957 117 40 1 3 119 5 120 1.88e-51 169
MsaG006428 AT1G63910.1 57.246 138 58 1 1 138 1 137 1.89e-51 173
MsaG006428 AT3G13890.2 62.712 118 43 1 1 118 1 117 1.02e-50 171
MsaG006428 AT1G79180.2 55.705 149 32 2 2 117 4 151 8.27e-50 167
MsaG006428 AT5G57620.1 40.377 265 128 8 1 251 1 249 7.88e-49 165
MsaG006428 AT4G37780.1 61.345 119 44 2 1 118 1 118 1.27e-48 164
MsaG006428 AT5G12870.1 67.593 108 35 0 13 120 18 125 1.91e-48 162
MsaG006428 AT3G49690.1 62.185 119 43 2 1 118 1 118 4.78e-48 162
MsaG006428 AT5G23000.1 62.185 119 43 2 1 118 1 118 5.48e-48 162
MsaG006428 AT3G13890.1 58.268 127 43 2 1 118 1 126 1.23e-47 163
MsaG006428 AT5G14750.1 60.909 110 43 0 8 117 11 120 1.24e-47 158
MsaG006428 AT5G65790.1 62.185 119 43 2 1 118 1 118 2.19e-47 162
MsaG006428 AT2G36890.1 57.031 128 53 2 1 127 1 127 1.86e-46 158
MsaG006428 AT5G35550.1 67.619 105 34 0 13 117 14 118 2.42e-46 156
MsaG006428 AT2G32460.2 65.714 105 36 0 12 116 5 109 2.68e-46 162
MsaG006428 AT2G32460.1 65.714 105 36 0 12 116 17 121 2.82e-46 162
MsaG006428 AT2G36890.2 57.031 128 53 2 1 127 42 168 4.00e-46 158
MsaG006428 AT5G55020.1 63.636 110 39 1 13 122 26 134 9.47e-46 161
MsaG006428 AT3G08500.1 62.609 115 40 1 6 117 20 134 2.10e-45 156
MsaG006428 AT5G40330.1 58.716 109 45 0 9 117 8 116 2.47e-45 152
MsaG006428 AT5G40350.1 47.059 153 72 1 13 165 17 160 2.83e-45 152
MsaG006428 AT3G11440.2 61.111 108 42 0 9 116 37 144 8.79e-45 157
MsaG006428 AT2G26960.1 60.909 110 42 1 13 122 20 128 9.32e-45 157
MsaG006428 AT3G11440.3 61.111 108 42 0 9 116 37 144 4.03e-44 157
MsaG006428 AT3G11440.4 61.111 108 42 0 9 116 37 144 4.03e-44 157
MsaG006428 AT3G11440.1 61.111 108 42 0 9 116 37 144 4.03e-44 157
MsaG006428 AT4G26930.1 60.909 110 42 1 13 122 19 127 7.40e-44 153
MsaG006428 AT5G06100.1 60.377 106 42 0 11 116 30 135 8.24e-44 154
MsaG006428 AT3G27920.1 55.856 111 49 0 8 118 9 119 8.72e-44 149
MsaG006428 AT3G24310.1 62.857 105 39 0 12 116 17 121 1.41e-43 149
MsaG006428 AT3G30210.1 64.423 104 37 0 12 115 26 129 3.50e-43 149
MsaG006428 AT5G06100.5 60.377 106 42 0 11 116 30 135 3.62e-43 154
MsaG006428 AT5G06100.2 60.377 106 42 0 11 116 30 135 3.62e-43 154
MsaG006428 AT5G06100.3 60.377 106 42 0 11 116 30 135 3.62e-43 154
MsaG006428 AT5G06100.4 60.377 106 42 0 11 116 30 135 3.62e-43 154
MsaG006428 AT1G48000.1 55.039 129 48 3 13 131 32 160 7.75e-43 147
MsaG006428 AT4G13480.1 63.107 103 38 0 14 116 7 109 1.64e-42 146
MsaG006428 AT5G52600.1 56.637 113 46 1 7 116 3 115 2.02e-42 144
MsaG006428 AT4G25560.1 57.983 119 47 1 1 119 1 116 2.62e-42 147
MsaG006428 AT3G27810.1 60.952 105 41 0 13 117 20 124 3.64e-42 144
MsaG006428 AT3G01530.1 57.018 114 49 0 4 117 16 129 4.53e-42 144
MsaG006428 AT2G47190.1 38.919 185 111 2 4 186 11 195 4.83e-42 145
MsaG006428 AT5G26660.2 52.632 133 42 1 46 178 14 125 7.17e-41 144
MsaG006428 AT5G52260.1 66.038 106 36 0 14 119 13 118 1.08e-40 142
MsaG006428 AT1G66370.1 55.172 116 47 1 1 116 1 111 3.93e-40 140
MsaG006428 AT1G25340.1 55.263 114 51 0 14 127 19 132 4.13e-40 141
MsaG006428 AT3G48920.1 58.824 102 42 0 14 115 19 120 3.16e-39 138
MsaG006428 AT3G53200.1 59.259 108 44 0 9 116 5 112 8.71e-39 136
MsaG006428 AT1G68320.1 55.856 111 49 0 13 123 19 129 1.86e-38 137
MsaG006428 AT3G06490.1 59.459 111 45 0 13 123 19 129 1.12e-37 135
MsaG006428 AT1G66380.1 58.879 107 44 0 10 116 5 111 6.02e-37 128
MsaG006428 AT1G56650.1 52.344 128 53 1 12 131 7 134 6.06e-37 132
MsaG006428 AT3G46130.1 54.286 105 48 0 12 116 8 112 1.27e-36 131
MsaG006428 AT5G49620.1 53.846 117 54 0 7 123 20 136 1.61e-36 132
MsaG006428 AT5G59780.3 54.369 103 47 0 14 116 9 111 2.57e-36 130
MsaG006428 AT1G66390.1 60.000 105 42 0 12 116 7 111 3.23e-36 130
MsaG006428 AT3G60460.1 51.327 113 53 2 9 120 7 118 2.75e-35 129
MsaG006428 AT1G25340.2 52.632 114 49 1 14 127 19 127 3.29e-35 128
MsaG006428 AT1G25340.3 52.632 114 49 1 14 127 19 127 6.92e-35 128
MsaG006428 AT5G35550.2 75.000 72 18 0 46 117 50 121 2.19e-33 123
MsaG006428 AT5G49620.2 48.092 131 54 1 7 123 20 150 7.38e-33 123
MsaG006428 AT3G12820.2 73.239 71 19 0 49 119 2 72 3.15e-32 117
MsaG006428 AT2G26950.1 35.841 226 112 7 13 211 16 235 7.42e-32 121
MsaG006428 AT5G14750.3 64.103 78 25 1 40 117 12 86 1.45e-31 115
MsaG006428 AT1G22640.3 48.529 136 57 3 60 193 2 126 3.79e-31 115
MsaG006428 AT3G47600.2 66.667 75 25 0 46 120 39 113 4.57e-31 118
MsaG006428 AT5G40350.2 44.262 122 59 1 44 165 3 115 5.54e-31 114
MsaG006428 AT3G53200.2 71.831 71 20 0 46 116 9 79 1.05e-29 111
MsaG006428 AT1G18960.1 44.262 122 61 3 15 134 10 126 2.19e-28 110
MsaG006428 AT3G46130.3 60.256 78 31 0 39 116 3 80 2.75e-28 108
MsaG006428 AT4G18770.1 40.845 142 83 1 9 150 211 351 3.23e-28 112
MsaG006428 AT4G37260.1 50.926 108 52 1 9 116 7 113 5.20e-28 110
MsaG006428 AT2G23290.1 50.980 102 49 1 15 116 13 113 7.02e-28 109
MsaG006428 AT5G59780.2 63.380 71 26 0 46 116 20 90 1.36e-27 106
MsaG006428 AT3G27810.2 62.500 72 27 0 46 117 4 75 1.62e-27 105
MsaG006428 AT5G02320.1 42.748 131 71 2 10 137 122 251 2.08e-27 111
MsaG006428 AT5G02320.2 42.748 131 71 2 10 137 122 251 2.08e-27 111
MsaG006428 AT3G46130.4 63.380 71 26 0 46 116 20 90 2.46e-27 106
MsaG006428 AT3G09230.1 48.148 108 47 2 15 118 55 157 2.60e-27 109
MsaG006428 AT5G02320.3 46.296 108 57 1 10 117 62 168 2.74e-27 110
MsaG006428 AT3G55730.1 50.980 102 49 1 15 116 56 156 3.28e-27 109
MsaG006428 AT1G71030.1 50.562 89 43 1 39 127 7 94 3.76e-27 104
MsaG006428 AT3G50060.1 48.039 102 52 1 15 116 6 106 4.24e-27 107
MsaG006428 AT5G58850.1 48.077 104 53 1 13 116 103 205 4.85e-27 109
MsaG006428 AT5G67300.1 49.020 102 51 1 15 116 6 106 5.54e-27 107
MsaG006428 AT1G71030.2 53.947 76 35 0 52 127 5 80 8.67e-27 103
MsaG006428 AT5G40360.1 44.444 108 59 1 8 115 151 257 1.20e-26 107
MsaG006428 AT2G39880.1 50.000 102 50 1 15 116 50 150 1.45e-26 107
MsaG006428 AT3G09370.2 45.794 107 57 1 10 116 130 235 3.76e-26 107
MsaG006428 AT3G09370.1 45.794 107 57 1 10 116 125 230 3.81e-26 107
MsaG006428 AT3G09370.3 45.794 107 57 1 10 116 138 243 4.77e-26 107
MsaG006428 AT5G11050.1 46.078 102 54 1 15 116 105 205 5.79e-26 106
MsaG006428 AT4G32730.5 45.370 108 58 1 10 117 82 188 9.96e-26 107
MsaG006428 AT4G32730.4 45.370 108 58 1 10 117 82 188 9.96e-26 107
MsaG006428 AT4G32730.3 45.370 108 58 1 10 117 82 188 9.96e-26 107
MsaG006428 AT4G32730.2 45.370 108 58 1 10 117 82 188 9.96e-26 107
MsaG006428 AT4G32730.1 45.370 108 58 1 10 117 82 188 1.15e-25 106
MsaG006428 AT4G32730.1 36.000 100 62 2 15 113 35 133 1.06e-12 68.6
MsaG006428 AT1G66380.3 63.889 72 26 0 45 116 7 78 2.52e-25 97.4
MsaG006428 AT3G23250.2 72.414 58 16 0 60 117 2 59 4.51e-25 100
MsaG006428 AT3G27785.1 45.536 112 58 2 9 119 183 292 6.71e-25 103
MsaG006428 AT5G11510.3 43.519 108 60 1 10 117 76 182 3.94e-24 102
MsaG006428 AT5G11510.3 35.000 100 63 2 15 113 29 127 4.06e-12 67.0
MsaG006428 AT5G11510.1 43.519 108 60 1 10 117 76 182 3.94e-24 102
MsaG006428 AT5G11510.1 35.000 100 63 2 15 113 29 127 4.06e-12 67.0
MsaG006428 AT5G11510.4 43.519 108 60 1 10 117 76 182 3.94e-24 102
MsaG006428 AT5G11510.4 35.000 100 63 2 15 113 29 127 4.06e-12 67.0
MsaG006428 AT5G11510.2 43.519 108 60 1 10 117 76 182 4.02e-24 102
MsaG006428 AT5G11510.2 35.000 100 63 2 15 113 29 127 3.24e-12 67.0
MsaG006428 AT5G11510.5 43.519 108 60 1 10 117 76 182 4.08e-24 102
MsaG006428 AT5G11510.5 35.000 100 63 2 15 113 29 127 3.07e-12 67.0
MsaG006428 AT1G69560.1 36.986 146 80 4 12 156 104 238 1.54e-23 98.2
MsaG006428 AT1G69560.2 36.986 146 80 4 12 156 120 254 1.91e-23 98.2
MsaG006428 AT1G17950.1 45.098 102 55 1 15 116 5 105 8.96e-23 94.7
MsaG006428 AT1G26780.1 48.000 100 49 2 13 111 96 193 1.59e-22 94.7
MsaG006428 AT1G26780.2 45.714 105 54 2 13 116 96 198 1.63e-22 95.9
MsaG006428 AT5G14750.4 63.793 58 21 0 60 117 2 59 1.74e-22 90.9
MsaG006428 AT5G14750.2 63.793 58 21 0 60 117 2 59 1.74e-22 90.9
MsaG006428 AT1G66380.2 53.571 84 39 0 12 95 7 90 1.52e-21 87.4
MsaG006428 AT2G25230.1 41.176 119 67 2 9 125 20 137 2.80e-21 90.1
MsaG006428 AT3G29020.1 40.777 103 60 1 15 117 65 166 7.98e-21 89.0
MsaG006428 AT4G33450.1 38.596 114 63 2 3 116 13 119 8.75e-21 89.4
MsaG006428 AT3G29020.2 40.777 103 60 1 15 117 67 168 1.61e-20 89.7
MsaG006428 AT1G73410.1 46.602 103 52 2 15 116 6 106 2.23e-20 87.8
MsaG006428 AT1G73410.2 46.602 103 52 2 15 116 6 106 2.73e-20 86.7
MsaG006428 AT4G28110.2 85.714 42 6 0 89 130 4 45 3.67e-20 86.3
MsaG006428 AT5G17800.1 44.118 102 56 1 15 116 93 193 4.00e-20 88.6
MsaG006428 AT5G61420.1 72.917 48 13 0 82 129 2 49 1.90e-18 83.6
MsaG006428 AT4G00540.2 41.667 108 59 2 13 117 101 207 4.20e-18 84.0
MsaG006428 AT4G00540.1 41.667 108 59 2 13 117 99 205 6.48e-18 83.6
MsaG006428 AT5G39700.1 38.393 112 67 2 8 119 49 158 2.67e-17 78.6
MsaG006428 AT2G37630.1 39.000 100 59 1 18 115 7 106 5.79e-17 80.5
MsaG006428 AT5G15310.3 36.879 141 80 3 89 222 9 147 6.15e-17 78.6
MsaG006428 AT5G40430.1 37.383 107 65 2 9 115 48 152 1.16e-16 78.2
MsaG006428 AT4G25560.2 68.750 48 15 0 72 119 3 50 4.14e-16 75.9
MsaG006428 AT1G14350.2 35.833 120 74 2 18 135 28 146 4.61e-16 78.2
MsaG006428 AT1G14350.1 35.833 120 74 2 18 135 28 146 4.61e-16 78.2
MsaG006428 AT2G02820.2 37.374 99 61 1 18 116 33 130 6.14e-15 74.7
MsaG006428 AT2G02820.1 37.374 99 61 1 18 116 33 130 8.15e-15 74.3
MsaG006428 AT2G02820.3 37.374 99 61 1 18 116 33 130 1.45e-14 73.2
MsaG006428 AT1G22640.2 41.905 105 52 3 89 193 16 111 2.88e-14 70.1
MsaG006428 AT5G59780.1 62.791 43 16 0 74 116 4 46 1.08e-13 68.2
MsaG006428 AT3G46130.2 62.791 43 16 0 74 116 4 46 1.93e-13 67.8
MsaG006428 AT1G74650.3 64.286 42 15 0 79 120 2 43 5.50e-13 67.8
MsaG006428 AT5G14340.2 57.778 45 19 0 89 133 10 54 2.40e-12 64.7
MsaG006428 AT3G28910.2 57.778 45 19 0 79 123 2 46 4.88e-12 64.7
MsaG006428 AT1G74430.2 48.077 52 27 0 78 129 8 59 2.60e-11 62.0

Find 62 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGAACTTGGTCTTGAAAT+TGG 0.182407 2:+5326914 None:intergenic
GCAAATATACCTGCATTCTT+TGG 0.201925 2:+5327674 None:intergenic
GTTGCATGCCAAGGAGATTT+TGG 0.243513 2:+5327082 None:intergenic
ATTCAGTTACATAGCATTCT+TGG 0.244592 2:-5327439 MsaT006428.1:CDS
TAGTCCTAGACTTGACTTAT+TGG 0.262917 2:-5327169 MsaT006428.1:CDS
TCAAACAAATGTGATTGATT+TGG 0.313222 2:+5326826 None:intergenic
ATTCTATGTTCATCTCTCTA+TGG 0.320999 2:-5327135 MsaT006428.1:CDS
ATTTCATTGTCCGTCCTTCC+TGG 0.322882 2:+5327258 None:intergenic
CCTTGGCATGCAACAACCTT+TGG 0.333556 2:-5327073 MsaT006428.1:CDS
TATAATCTTGTTGATGTTGT+TGG 0.333703 2:+5326998 None:intergenic
AGAAACATGGTTATGGCAAT+TGG 0.355623 2:-5327706 MsaT006428.1:CDS
CTAAGGTCGGTGAAATTTGA+TGG 0.370501 2:+5326784 None:intergenic
CAAATATACCTGCATTCTTT+GGG 0.380676 2:+5327675 None:intergenic
TACATTCAGAAACATGGTTA+TGG 0.393040 2:-5327713 MsaT006428.1:CDS
CATTAGGTACTTGTTGAACT+TGG 0.404953 2:+5326902 None:intergenic
GATGGATATGTATTCACATT+GGG 0.405959 2:+5326802 None:intergenic
TGGAAGTTGTTCATTATTTG+AGG 0.412921 2:+5327102 None:intergenic
GGAACTTGGTTCTGTATTTG+AGG 0.414212 2:+5326952 None:intergenic
ATTACTATCAAAATATTGAT+TGG 0.414298 2:-5326759 MsaT006428.1:intron
GTACAAGCATTATCAGCATT+AGG 0.421505 2:+5326886 None:intergenic
ACTATTGGAACACACACATT+AGG 0.422347 2:-5327230 MsaT006428.1:CDS
CCTTGTTGTGAGAAGAATAA+TGG 0.449193 2:-5327785 MsaT006428.1:CDS
GCAAAAGTTGTCGTCTCCGC+TGG 0.453551 2:-5327525 MsaT006428.1:CDS
TGATCCTCCTCAGTTGTCCA+TGG 0.458297 2:+5327749 None:intergenic
AAAGACCCACTTCATTTGCC+AGG 0.467857 2:-5321065 MsaT006428.1:CDS
AAGAATAATGGTCTCAAGAA+AGG 0.479998 2:-5327773 MsaT006428.1:CDS
TTGATAGTAATTACTAAGGT+CGG 0.480724 2:+5326771 None:intergenic
TTCTGTATTTGAGGATTACA+AGG 0.484329 2:+5326961 None:intergenic
GGAACACACACATTAGGAAA+AGG 0.485344 2:-5327224 MsaT006428.1:CDS
GAAGCTAACTTTAGAAGCTC+AGG 0.487104 2:+5327045 None:intergenic
AACAACTTCCAAAATCTCCT+TGG 0.494886 2:-5327090 MsaT006428.1:CDS
TGATGGATATGTATTCACAT+TGG 0.503073 2:+5326801 None:intergenic
GAGGAGGATCAGAAACTCAT+TGG 0.513810 2:-5327737 MsaT006428.1:CDS
CCAAAGGTTGTTGCATGCCA+AGG 0.520611 2:+5327073 None:intergenic
AGTCTAGGACTATGTGTCAC+TGG 0.521633 2:+5327180 None:intergenic
AGGTCCAATAAGTCAAGTCT+AGG 0.528293 2:+5327165 None:intergenic
TAAATAGGTTTGCAAAGATG+TGG 0.544084 2:-5327547 MsaT006428.1:intron
TAACTCCCTGGCAAATGAAG+TGG 0.548691 2:+5321059 None:intergenic
CAAAATGTGAAAGTGGAACT+TGG 0.548815 2:+5326938 None:intergenic
GAAAATGCATTCTAACTCCC+TGG 0.552580 2:+5321047 None:intergenic
ACAATTGCATCTCGATTACC+AGG 0.573205 2:-5327276 MsaT006428.1:CDS
AATTGGACAAAATGTGAAAG+TGG 0.575573 2:+5326931 None:intergenic
CCATTATTCTTCTCACAACA+AGG 0.578512 2:+5327785 None:intergenic
TTGATGTTGTTGGTGTGATG+AGG 0.580363 2:+5327008 None:intergenic
AACATGGTTATGGCAATTGG+AGG 0.580738 2:-5327703 MsaT006428.1:CDS
AAGACCCACTTCATTTGCCA+GGG 0.582610 2:-5321064 MsaT006428.1:CDS
AACTCCCTGGCAAATGAAGT+GGG 0.586692 2:+5321060 None:intergenic
AGAAGCTCAGGATTCACCAA+AGG 0.600325 2:+5327057 None:intergenic
AGGACACTCCCAAAGAATGC+AGG 0.611901 2:-5327683 MsaT006428.1:intron
ATTGGTTACATTCAGAAACA+TGG 0.616475 2:-5327719 MsaT006428.1:CDS
ATCTCGATTACCAGGAAGGA+CGG 0.618625 2:-5327268 MsaT006428.1:CDS
TTGCATCTCGATTACCAGGA+AGG 0.634311 2:-5327272 MsaT006428.1:CDS
TGATGAGGTACTGAAGAGTG+AGG 0.641633 2:+5327023 None:intergenic
AACACAAGGTGTAGTGAATG+TGG 0.648265 2:+5326861 None:intergenic
ATGAACATAGAATAGAAGAG+AGG 0.652399 2:+5327145 None:intergenic
AGGACCATGGACAACTGAGG+AGG 0.657016 2:-5327753 MsaT006428.1:CDS
GTCGGAGATAGTTTGTCCAG+CGG 0.665235 2:+5327509 None:intergenic
ATGGTCTCAAGAAAGGACCA+TGG 0.674045 2:-5327766 MsaT006428.1:CDS
CTCCGACCAGATATAAAACG+TGG 0.676493 2:-5327493 MsaT006428.1:CDS
GAAAGGACCATGGACAACTG+AGG 0.679174 2:-5327756 MsaT006428.1:CDS
GACCAGATATAAAACGTGGT+CGG 0.697361 2:-5327489 MsaT006428.1:CDS
GGCAATGAAGAAGAAACACA+AGG 0.698458 2:+5326847 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr2 gene 5321058 5327819 5321058 ID=MsaG006428
Chr2 mRNA 5321058 5327819 5321058 ID=MsaT006428.1;Parent=MsaG006428
Chr2 exon 5321058 5321088 5321058 ID=MsaT006428.1.exon4;Parent=MsaT006428.1
Chr2 CDS 5321058 5321088 5321058 ID=cds.MsaT006428.1;Parent=MsaT006428.1
Chr2 exon 5326760 5327305 5326760 ID=MsaT006428.1.exon3;Parent=MsaT006428.1
Chr2 CDS 5326760 5327305 5326760 ID=cds.MsaT006428.1;Parent=MsaT006428.1
Chr2 exon 5327433 5327562 5327433 ID=MsaT006428.1.exon2;Parent=MsaT006428.1
Chr2 CDS 5327433 5327562 5327433 ID=cds.MsaT006428.1;Parent=MsaT006428.1
Chr2 exon 5327684 5327819 5327684 ID=MsaT006428.1.exon1;Parent=MsaT006428.1
Chr2 CDS 5327684 5327819 5327684 ID=cds.MsaT006428.1;Parent=MsaT006428.1
Gene Sequence

>MsaT006428.1

ATGGGAAGAACACCTTGTTGTGAGAAGAATAATGGTCTCAAGAAAGGACCATGGACAACTGAGGAGGATCAGAAACTCATTGGTTACATTCAGAAACATGGTTATGGCAATTGGAGGACACTCCCAAAGAATGCAGGTTTGCAAAGATGTGGCAAAAGTTGTCGTCTCCGCTGGACAAACTATCTCCGACCAGATATAAAACGTGGTCGGTTTTCATTTGAAGAGGAAGAGACAATTATTCAGTTACATAGCATTCTTGGCAACAAGTGGTCTACAATTGCATCTCGATTACCAGGAAGGACGGACAATGAAATAAAAAACTATTGGAACACACACATTAGGAAAAGGCTTTTGAGAATGGGAATTGATCCAGTGACACATAGTCCTAGACTTGACTTATTGGACCTCTCTTCTATTCTATGTTCATCTCTCTATGGTAATTCATCACCTCAAATAATGAACAACTTCCAAAATCTCCTTGGCATGCAACAACCTTTGGTGAATCCTGAGCTTCTAAAGTTAGCTTCCTCACTCTTCAGTACCTCATCACACCAACAACATCAACAAGATTATAATAATAATAATCAACCTTGTAATCCTCAAATACAGAACCAAGTTCCACTTTCACATTTTGTCCAATTTCAAGACCAAGTTCAACAAGTACCTAATGCTGATAATGCTTGTACAACCACATTCACTACACCTTGTGTTTCTTCTTCATTGCCAAATCAATCACATTTGTTTGAACCCAATGTGAATACATATCCATCAAATTTCACCGACCTTAGTAATTACTATCAAAATATTGATTGGAAAGACCCACTTCATTTGCCAGGGAGTTAG

Protein sequence

>MsaT006428.1

MGRTPCCEKNNGLKKGPWTTEEDQKLIGYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSTIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSPRLDLLDLSSILCSSLYGNSSPQIMNNFQNLLGMQQPLVNPELLKLASSLFSTSSHQQHQQDYNNNNQPCNPQIQNQVPLSHFVQFQDQVQQVPNADNACTTTFTTPCVSSSLPNQSHLFEPNVNTYPSNFTDLSNYYQNIDWKDPLHLPGS*