AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG006571

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG006571 MtrunA17_Chr2g0282771 97.051 1797 42 3 1 1788 1 1795 0.0 3595
MsaG006571 MtrunA17_Chr4g0046591 67.998 1753 484 22 29 1773 20 1703 0.0 2083
MsaG006571 MtrunA17_Chr4g0040511 47.145 1646 759 34 37 1621 16 1611 0.0 1289
MsaG006571 MtrunA17_Chr8g0389091 26.812 552 305 17 956 1497 635 1097 1.40e-41 167
MsaG006571 MtrunA17_Chr8g0389091 32.948 346 190 6 487 831 277 581 3.55e-41 166
MsaG006571 MtrunA17_Chr5g0441991 51.724 58 28 0 42 99 20 77 3.38e-12 71.2
MsaG006571 MtrunA17_Chr3g0094681 50.909 55 27 0 43 97 21 75 3.08e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG006571 AT1G28420.1 48.560 1736 712 38 34 1710 33 1646 0.0 1308
MsaG006571 AT5G44180.3 49.138 1508 645 30 38 1519 15 1426 0.0 1266
MsaG006571 AT5G44180.1 49.138 1508 645 30 38 1519 15 1426 0.0 1266
MsaG006571 AT5G44180.2 51.368 1170 487 23 38 1190 15 1119 0.0 1032
MsaG006571 AT5G44180.2 46.565 131 66 1 1389 1519 1113 1239 6.56e-26 117
MsaG006571 AT4G12750.1 30.518 367 195 6 472 820 236 560 1.97e-34 145
MsaG006571 AT4G12750.1 27.224 371 233 12 1136 1497 747 1089 5.65e-28 124
MsaG006571 AT4G03250.1 47.368 57 30 0 43 99 22 78 6.50e-11 67.4

Find 443 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGGGAAGATGGACCTATTT+TGG 0.114913 2:-7016976 MsaT006571.1:CDS
CTGAAGCATTTGGAACAATT+TGG 0.130085 2:-7011080 MsaT006571.1:CDS
GGTAAATGTAAAAGAAAATT+TGG 0.144383 2:-7013047 MsaT006571.1:CDS
TGCAAAACCTTGAATCATTT+AGG 0.150535 2:-7015005 MsaT006571.1:CDS
TATCGTATTGTACTGAATTT+TGG 0.166943 2:+7013086 None:intergenic
CCTCCATTGGATCGTATAAA+TGG 0.204294 2:+7016152 None:intergenic
AAAATCCAGATATTTGAAAA+TGG 0.211386 2:-7013220 MsaT006571.1:CDS
TGGAATATGATCATGGAAAT+TGG 0.222823 2:-7009936 MsaT006571.1:CDS
CATATTATCATCAAGATTTC+CGG 0.228504 2:+7012892 None:intergenic
GCTAACTGTCGCAAAATTTC+AGG 0.237197 2:+7013990 None:intergenic
TAATTTATCCAAAGATATTA+TGG 0.253062 2:-7011304 MsaT006571.1:CDS
CAATGGTTCTCTTCCATCCT+TGG 0.257696 2:+7010107 None:intergenic
TCAAACTCAATTCCCAAAAT+AGG 0.262702 2:+7016963 None:intergenic
GCAGGCCTTTGATATTCTTT+TGG 0.263756 2:-7011844 MsaT006571.1:intron
CGGAAATCTTGATGATAATA+TGG 0.268511 2:-7012891 MsaT006571.1:CDS
GCAAAACCTTGAATCATTTA+GGG 0.269120 2:-7015004 MsaT006571.1:CDS
TTCAGTACAATACGATAATA+TGG 0.270327 2:-7013080 MsaT006571.1:CDS
GTGCAGAAGGAGTTCCTCTT+TGG 0.283082 2:+7012408 None:intergenic
CCCGCAAGACCGTGTCATTA+TGG 0.284189 2:+7015813 None:intergenic
CTTTGAGTTCCATGAATTCT+AGG 0.284781 2:+7016085 None:intergenic
GCGAAAGGCGCCACCTTTGC+TGG 0.285441 2:-7017204 MsaT006571.1:CDS
ACAAATTCATCAAGAGTAAA+AGG 0.289180 2:+7014451 None:intergenic
TTTCTTCATCCTTATTTCAT+AGG 0.291487 2:+7015624 None:intergenic
AAAGGGAGGAGGGGAAGTAT+AGG 0.295610 2:+7016012 None:intergenic
CTATGACTCCTGTTCACATT+GGG 0.295937 2:-7010044 MsaT006571.1:CDS
CATTGCCACCTGATGCATTT+GGG 0.298482 2:-7016938 MsaT006571.1:CDS
GCTGCAAATTTAACTGTTCC+TGG 0.298642 2:+7013563 None:intergenic
CGATAATATGGATATTAGTT+TGG 0.298752 2:-7013068 MsaT006571.1:CDS
CTGGAGCCTTGTAATGAATA+TGG 0.303206 2:-7017146 MsaT006571.1:CDS
TTCGGAACAAACGGATATTC+AGG 0.304623 2:+7016220 None:intergenic
CCAGTGCCCGAGTGCCATTC+AGG 0.304676 2:-7011663 MsaT006571.1:CDS
CTCAAGCTTTACGTAGTTGA+TGG 0.310459 2:+7010648 None:intergenic
GTTGCTTCTTTCTCCTCAAC+AGG 0.312467 2:+7010616 None:intergenic
ATCCGTGGAGGAACTGTTAC+AGG 0.312777 2:-7011010 MsaT006571.1:intron
GGGGCTTTGACATACGAAAT+TGG 0.313114 2:-7014040 MsaT006571.1:CDS
CTCTAGTACATTCAAACCTT+TGG 0.314270 2:+7013514 None:intergenic
CCATTGCCACCTGATGCATT+TGG 0.314663 2:-7016939 MsaT006571.1:CDS
GGAAGTAGAGCAACTGATTC+AGG 0.317857 2:+7010727 None:intergenic
TATGGATCCGGGTCAGGTTC+TGG 0.318902 2:-7017128 MsaT006571.1:CDS
CTTGTTAGAAATCTGGTCTT+CGG 0.321633 2:-7013402 MsaT006571.1:intron
GCCTAATCCTAAGTTGATTC+TGG 0.321806 2:-7017165 MsaT006571.1:CDS
CCATAATGACACGGTCTTGC+GGG 0.321838 2:-7015813 MsaT006571.1:CDS
CAATTTGGTGATCAGTGAAT+TGG 0.322334 2:+7015879 None:intergenic
ATGCCAGTATTGGCTACGTT+TGG 0.327923 2:+7015908 None:intergenic
TTAGCACTATCTGCAGGATT+TGG 0.331449 2:-7013972 MsaT006571.1:CDS
CACTGGATTCACGCGGGATC+AGG 0.331686 2:-7011818 MsaT006571.1:CDS
TCTAGTACATTCAAACCTTT+GGG 0.336654 2:+7013515 None:intergenic
CAATTCACTGATCACCAAAT+TGG 0.337621 2:-7015878 MsaT006571.1:CDS
CTTTCTTGCTTCTGAAAGAA+TGG 0.337761 2:+7013243 None:intergenic
TGATGCTTCAGGTGTCTTGC+TGG 0.339404 2:+7013369 None:intergenic
GAGTTGTCCGGACCTGTGCC+TGG 0.340287 2:+7012341 None:intergenic
AAGGGAGGAGGGGAAGTATA+GGG 0.340484 2:+7016013 None:intergenic
AGAATGCTCCATAATATCTT+TGG 0.340896 2:+7011296 None:intergenic
AAATCCCTATCCCATCTGTT+AGG 0.342001 2:+7009889 None:intergenic
GTTTGGGTGAGGTTCCCTTT+TGG 0.343559 2:+7015925 None:intergenic
TGGGAGTCTTCCATAAAATA+AGG 0.346133 2:+7011402 None:intergenic
CTTGTCCTGCTGAGACAAAA+AGG 0.347365 2:+7015994 None:intergenic
GGATGAACAGTTAGAATTGA+TGG 0.347580 2:-7015085 MsaT006571.1:CDS
ATCGGTTACGCCTGCGGTCC+TGG 0.348401 2:+7012210 None:intergenic
TAACAGATGGGATAGGGATT+TGG 0.350231 2:-7009887 MsaT006571.1:CDS
CAGGATTAGCAGCTCCATTC+TGG 0.350464 2:+7014201 None:intergenic
TTTACTAAATCATCGTCTTC+AGG 0.352624 2:+7013124 None:intergenic
GCAAAGTATCAAGATCAATA+TGG 0.353463 2:+7015025 None:intergenic
ACATGAAGTTAGAACGAATA+AGG 0.359766 2:-7016410 MsaT006571.1:intron
CTCTAGCCCGTTTGCCCGGA+TGG 0.360683 2:-7017105 MsaT006571.1:CDS
GTAAATGTAAAAGAAAATTT+GGG 0.361916 2:-7013046 MsaT006571.1:CDS
CATCATTTGACGGAAATGTT+TGG 0.362870 2:+7011364 None:intergenic
TCTAGTAATGATCCTGGTTC+TGG 0.366872 2:-7012164 MsaT006571.1:CDS
TCTGTTCTCTCTGAAGCATT+TGG 0.367912 2:-7011090 MsaT006571.1:CDS
CAAGCATTTCAAGTTGAAAA+GGG 0.369118 2:+7017482 None:intergenic
GAACATCTACCTAGAATTCA+TGG 0.369626 2:-7016094 MsaT006571.1:CDS
ACCGCAGGCGTAACCGATAT+TGG 0.370287 2:-7012205 MsaT006571.1:CDS
CAGGTGTCTTGCTGGTTGTC+AGG 0.370707 2:+7013377 None:intergenic
GCTTGTGTGGAGGCACAGTT+AGG 0.371831 2:-7017008 MsaT006571.1:CDS
AGCATTAGATCTGATATGTT+TGG 0.372492 2:-7016190 MsaT006571.1:CDS
TCAAGCATTTCAAGTTGAAA+AGG 0.381169 2:+7017481 None:intergenic
TTGCTGATGCTCTTGAGTTA+TGG 0.383282 2:-7014474 MsaT006571.1:CDS
TCGACGGCCAGTATCTTGTT+TGG 0.388356 2:+7010293 None:intergenic
TTCAACTTCCTTGGCAACTC+TGG 0.388626 2:+7015648 None:intergenic
GACAATGCTGCAGTGGTTAG+AGG 0.390080 2:+7010697 None:intergenic
TACGCCTGCGGTCCTGGCCA+AGG 0.390990 2:+7012216 None:intergenic
AATCAGTTGCTCTACTTCCA+TGG 0.391552 2:-7010723 MsaT006571.1:CDS
GTCTGAGAAGTTGGGGTTGT+CGG 0.391695 2:-7017297 MsaT006571.1:CDS
AAACTCTCTGTTAGGCTTGA+AGG 0.392296 2:+7010455 None:intergenic
GCCTTTCGCACCTTCTTAAC+CGG 0.392579 2:+7017218 None:intergenic
CACCCAAACGTAGCCAATAC+TGG 0.393589 2:-7015911 MsaT006571.1:CDS
AAGTTGAAGCCTATGAAATA+AGG 0.393643 2:-7015633 MsaT006571.1:CDS
AACAGCAAGATTATGAGTTC+AGG 0.394494 2:-7017541 MsaT006571.1:CDS
CAAGCCTAACAGAGAGTTTG+AGG 0.394957 2:-7010451 MsaT006571.1:CDS
TTGTTAGAAATCTGGTCTTC+GGG 0.400044 2:-7013401 MsaT006571.1:intron
CCACTGCAGCATTGTCTCTC+AGG 0.400453 2:-7010690 MsaT006571.1:CDS
TGCCAGTATTGGCTACGTTT+GGG 0.402993 2:+7015909 None:intergenic
TGCATGCACAATATTCAAAA+AGG 0.403309 2:-7012307 MsaT006571.1:CDS
CTCAACTCCATCCGGGCAAA+CGG 0.403462 2:+7017098 None:intergenic
AGAGCTTGCAGAGAAGATTC+AGG 0.403864 2:-7013495 MsaT006571.1:intron
TACCCCTTGGCCAGGACCGC+AGG 0.404528 2:-7012220 MsaT006571.1:CDS
TTCATAGGCTTCAACTTCCT+TGG 0.404823 2:+7015639 None:intergenic
GATAGAGTTGTCTGAGAAGT+TGG 0.405331 2:-7017306 MsaT006571.1:CDS
TCTGAGGACAAGATTGCTTA+AGG 0.408514 2:-7011268 MsaT006571.1:CDS
CACAGTTAGGGGAGCCTTTG+AGG 0.409127 2:-7016995 MsaT006571.1:CDS
GATCATGGAAATTGGGAGAT+AGG 0.409401 2:-7009928 MsaT006571.1:CDS
TACAATTCCAAACAAGATAC+TGG 0.409805 2:-7010300 MsaT006571.1:CDS
GCAACAGAAATTGATGCTTC+AGG 0.411135 2:+7013358 None:intergenic
CTCCATTGGATCGTATAAAT+GGG 0.412703 2:+7016153 None:intergenic
TACTGGCCGTCGAAACGTTA+AGG 0.413102 2:-7010283 MsaT006571.1:CDS
ATAGAGTTGTCTGAGAAGTT+GGG 0.413910 2:-7017305 MsaT006571.1:CDS
AAATCCAGATATTTGAAAAT+GGG 0.416183 2:-7013219 MsaT006571.1:CDS
ATAACAGGATTCAAGATTGT+TGG 0.421418 2:-7014309 MsaT006571.1:intron
CCCGAGTGCCATTCAGGATC+TGG 0.422531 2:-7011657 MsaT006571.1:CDS
CTGAATAGAGTAGTGAATGT+AGG 0.424161 2:-7009724 MsaT006571.1:CDS
CTTACTCCTTCCACAATCTC+TGG 0.424952 2:+7014167 None:intergenic
CCTTCTTGTCTTTCAACCTC+CGG 0.426074 2:+7017246 None:intergenic
ATCTTGTTCTGAGTTGATCC+AGG 0.426673 2:+7014822 None:intergenic
GCCCACCCCTAAATGATTCA+AGG 0.426677 2:+7014998 None:intergenic
TAAGGTCCTGCTGTCATGTA+TGG 0.429429 2:-7011250 MsaT006571.1:CDS
CCTGAATGGCACTCGGGCAC+TGG 0.430744 2:+7011663 None:intergenic
CTCTACAACAGACGAATTGT+TGG 0.431310 2:-7010794 MsaT006571.1:CDS
AGGACACCTTCTACAGGATT+AGG 0.432054 2:-7014230 MsaT006571.1:CDS
TGAGTCACCACAGACTATAA+TGG 0.432221 2:-7017045 MsaT006571.1:CDS
GGAATATGATCATGGAAATT+GGG 0.434917 2:-7009935 MsaT006571.1:CDS
TCTACAACAGACGAATTGTT+GGG 0.435097 2:-7010793 MsaT006571.1:CDS
GATGCATTTGGGGCACCCTT+AGG 0.436957 2:-7016927 MsaT006571.1:intron
CTGGCTCTAGCCCGTTTGCC+CGG 0.438216 2:-7017109 MsaT006571.1:CDS
GAAATCGATGAAAGCAAGTC+TGG 0.440423 2:-7012869 MsaT006571.1:CDS
CTCTCTCTTGAGGGCCCCAA+AGG 0.443347 2:-7013530 MsaT006571.1:CDS
AGTGGGACAATCGGCATCCT+TGG 0.443570 2:+7012955 None:intergenic
AACGATAATGACATTGGTAT+TGG 0.444286 2:-7009811 MsaT006571.1:CDS
GATCTAATGCTAGGCTGGTT+CGG 0.444716 2:+7016202 None:intergenic
AATCCCTATCCCATCTGTTA+GGG 0.444940 2:+7009890 None:intergenic
GTCATTTCTACACTTCGTAA+TGG 0.445805 2:-7013665 MsaT006571.1:CDS
ATGCAACAAACTGCCAATAT+CGG 0.446056 2:+7012192 None:intergenic
GAAATTAAAACAGCAGGGAC+AGG 0.447944 2:-7010241 MsaT006571.1:CDS
AGCTGTTGAAGATTTGTTGC+TGG 0.448006 2:-7010154 MsaT006571.1:CDS
TTGAACATCATGATGGTAGT+TGG 0.449047 2:-7012130 MsaT006571.1:CDS
TAACAGGATTCAAGATTGTT+GGG 0.450234 2:-7014308 MsaT006571.1:intron
AACTGTTTCTCAGGATCGAT+TGG 0.451863 2:-7012651 MsaT006571.1:intron
TGAGAAACTTGGATGAAGAA+TGG 0.452058 2:-7010086 MsaT006571.1:CDS
TTTCACGTTCTCTCTCTTGA+GGG 0.452612 2:-7013539 MsaT006571.1:CDS
TCCAGAATCAACTTAGGATT+AGG 0.453084 2:+7017164 None:intergenic
ACAGGGAACACAAGGACAAG+GGG 0.454229 2:-7010223 MsaT006571.1:CDS
AACGCTCTTGTTGCATTGGT+TGG 0.455023 2:-7012782 MsaT006571.1:CDS
TGACGGAAATGTTTGGTGGC+AGG 0.456417 2:+7011371 None:intergenic
CTTTGATTTCCCTCCACAGC+AGG 0.456515 2:+7012494 None:intergenic
TCTGGAGAACCATGGGTTCA+AGG 0.457333 2:-7012851 MsaT006571.1:CDS
ACCATGGGTTCAAGGACTTA+CGG 0.459012 2:-7012843 MsaT006571.1:CDS
TGCTCGCCTATCGTCTCAAC+AGG 0.460161 2:-7016050 MsaT006571.1:CDS
GAAAGACAAGAAGGAGTTAC+CGG 0.460260 2:-7017237 MsaT006571.1:CDS
TTCACTCCTAATCCTGTAGA+AGG 0.460448 2:+7014224 None:intergenic
CCAATGTGAACAGGAGTCAT+AGG 0.460889 2:+7010045 None:intergenic
CCTTGTAATGAATATGGATC+CGG 0.461257 2:-7017140 MsaT006571.1:CDS
CTCTTCTTTATCATTTGCAC+AGG 0.461315 2:+7013917 None:intergenic
CCACATTCCTCAACTCCATC+CGG 0.462105 2:+7017090 None:intergenic
TGTTCATTTCCAATCGGAAA+AGG 0.464769 2:+7016112 None:intergenic
ATTAGCAGAAGGTTTAACTT+TGG 0.465048 2:+7010401 None:intergenic
AATTCCCAGAAGGGTGATGA+TGG 0.465278 2:-7017604 MsaT006571.1:CDS
GGGCGAGGAGCTAGTGATCT+TGG 0.465938 2:-7010351 MsaT006571.1:CDS
ATCTTCACTCATAACATCTT+CGG 0.466707 2:+7009696 None:intergenic
AGAGCGAATGAGGAAAGAAA+TGG 0.466756 2:-7015464 MsaT006571.1:CDS
TCAGCAACCCCAATGTGAAC+AGG 0.466771 2:+7010036 None:intergenic
TCTTCATCCAAGTTTCTCAA+TGG 0.468649 2:+7010090 None:intergenic
GTAGCTCATGATTTCTGCCC+AGG 0.468923 2:-7012359 MsaT006571.1:CDS
TAATATTGATGTCGAGCAAT+GGG 0.469453 2:+7012471 None:intergenic
GGGGAGCCTTTGAGGGAAGA+TGG 0.471128 2:-7016987 MsaT006571.1:CDS
ATTTCACGTTCTCTCTCTTG+AGG 0.472406 2:-7013540 MsaT006571.1:CDS
ATAATGATGTTGTCCCCAAA+AGG 0.473532 2:-7015940 MsaT006571.1:CDS
TTTGAAAATGGGTTTCTAGC+TGG 0.474564 2:-7013208 MsaT006571.1:CDS
AAACACACATTTCAATGTGT+TGG 0.475783 2:-7011327 MsaT006571.1:CDS
TTGGGAGTTAATGCCAGTAT+TGG 0.475841 2:+7015898 None:intergenic
TTCAGTGGAGACATATCCTT+CGG 0.476034 2:-7017339 MsaT006571.1:intron
AATTTGGTGATCAGTGAATT+GGG 0.476491 2:+7015880 None:intergenic
GGAGTTGGCTGCAGCAAGCA+AGG 0.477151 2:-7015064 MsaT006571.1:CDS
CAAGGCTCCAGAATCAACTT+AGG 0.477610 2:+7017158 None:intergenic
AAGAGAACCATTGAGAAACT+TGG 0.479146 2:-7010097 MsaT006571.1:CDS
ATCAGTTGCTCTACTTCCAT+GGG 0.481010 2:-7010722 MsaT006571.1:CDS
TCATCCTTCAAAATTGAGCT+TGG 0.481622 2:-7011582 MsaT006571.1:CDS
ATCCAGGGCTGGATAGCAAA+TGG 0.482139 2:+7014838 None:intergenic
ATCTCGAGGAGGAGATGGAT+AGG 0.483354 2:+7015961 None:intergenic
TGCTTCTGAAAGAATGGACT+CGG 0.484032 2:+7013249 None:intergenic
ACGCCTGCGGTCCTGGCCAA+GGG 0.484182 2:+7012217 None:intergenic
ACAGTTAGGGGAGCCTTTGA+GGG 0.484591 2:-7016994 MsaT006571.1:CDS
TCCATCCTTGGAACTATGAC+TGG 0.486245 2:+7010119 None:intergenic
ACAAGATATCTTAAGAAGAA+AGG 0.487110 2:-7015590 MsaT006571.1:intron
TCTAAACGCTCTTGTTGCAT+TGG 0.487462 2:-7012786 MsaT006571.1:CDS
TGAATAGAGTAGTGAATGTA+GGG 0.488159 2:-7009723 MsaT006571.1:CDS
TCAACTCCATCCGGGCAAAC+GGG 0.488294 2:+7017099 None:intergenic
TCTGTTGCTTTGACAAGAGA+TGG 0.488492 2:-7013343 MsaT006571.1:CDS
AATGAATATGGATCCGGGTC+AGG 0.490132 2:-7017134 MsaT006571.1:CDS
GCATCCTTGGAACCATTCTC+AGG 0.491609 2:+7012968 None:intergenic
GTTCGTACACGATATGTTGA+TGG 0.491663 2:+7013298 None:intergenic
CCTATGACTCCTGTTCACAT+TGG 0.492058 2:-7010045 MsaT006571.1:CDS
AGAATGGACTCGGCATCTGC+AGG 0.492692 2:+7013259 None:intergenic
GAGAAACTTGGATGAAGAAT+GGG 0.494611 2:-7010085 MsaT006571.1:CDS
ATCTCTGGATGGCCACCGGC+AGG 0.495742 2:+7014182 None:intergenic
TATCAGATCTAATGCTAGGC+TGG 0.497086 2:+7016197 None:intergenic
CAGAGGAGATGTATGTCTAC+AGG 0.497524 2:-7012247 MsaT006571.1:CDS
AAGTCAGAAATTAAAACAGC+AGG 0.497648 2:-7010247 MsaT006571.1:CDS
AGAGAAGGAAGGAAGAAGAA+AGG 0.499621 2:-7015426 MsaT006571.1:CDS
TCCATAATGACACGGTCTTG+CGG 0.499702 2:-7015814 MsaT006571.1:CDS
AAGATCAATATGGATGATAG+AGG 0.501592 2:+7015035 None:intergenic
AAGGGTGCCCCAAATGCATC+AGG 0.501705 2:+7016930 None:intergenic
AGAGATTCGCAAAGAGAAAG+AGG 0.502023 2:-7015181 MsaT006571.1:CDS
TTCAATCCGCATTATTCTTG+AGG 0.502637 2:-7012741 MsaT006571.1:intron
AAGGAAAGCTGCCCTTGAAA+AGG 0.504701 2:-7015151 MsaT006571.1:CDS
GCTAATAAAATTGCACGAAG+TGG 0.504989 2:-7010384 MsaT006571.1:CDS
AAATTAAATTCATCATTTGA+CGG 0.505138 2:+7011354 None:intergenic
CGACAGTTAGCACTATCTGC+AGG 0.505764 2:-7013978 MsaT006571.1:CDS
GCCAGATCCTGAATGGCACT+CGG 0.510123 2:+7011656 None:intergenic
GATGACAGAAGTGGGACAAT+CGG 0.510133 2:+7012946 None:intergenic
CATGATTTCTGCCCAGGCAC+AGG 0.510338 2:-7012353 MsaT006571.1:CDS
CAGCAGGGACAGGGAACACA+AGG 0.510675 2:-7010231 MsaT006571.1:CDS
ATAGGCGAGCACGGGAAGAA+TGG 0.511735 2:+7016062 None:intergenic
TTCTTCTCTTTCAACATCAA+CGG 0.512077 2:+7013177 None:intergenic
AACTATGACTGGCTGCTGCA+TGG 0.513290 2:+7010130 None:intergenic
AGATGGGATAGGGATTTGGT+TGG 0.513510 2:-7009883 MsaT006571.1:CDS
GCGTGTGAAAATCTAAATAC+CGG 0.513699 2:-7012911 MsaT006571.1:CDS
TAGAGTTGTCTGAGAAGTTG+GGG 0.513858 2:-7017304 MsaT006571.1:CDS
CCGGATCCATATTCATTACA+AGG 0.514192 2:+7017140 None:intergenic
ATTGCCACCTGATGCATTTG+GGG 0.514938 2:-7016937 MsaT006571.1:CDS
CGTAGAATGAAGAGCGAATG+AGG 0.516219 2:-7015474 MsaT006571.1:intron
CTAGGCTGGTTCGGAACAAA+CGG 0.517085 2:+7016211 None:intergenic
TATTAATAAAGGCTGAGAAA+AGG 0.518452 2:-7015215 MsaT006571.1:intron
ATCTGACTCTGAGAGTTGTC+CGG 0.518778 2:+7012329 None:intergenic
ACAAAGATCCTGCCAGAACC+AGG 0.519239 2:+7012152 None:intergenic
GGGGAAGTATAGGGAGTCAC+AGG 0.521596 2:+7016022 None:intergenic
AACTCTCTGTTAGGCTTGAA+GGG 0.521883 2:+7010456 None:intergenic
GTTCTGAGTTGATCCAGGGC+TGG 0.522243 2:+7014827 None:intergenic
TTTATCATTTGCACAGGACC+AGG 0.522278 2:+7013923 None:intergenic
TCCGTAAGTCCTTGAACCCA+TGG 0.523687 2:+7012842 None:intergenic
TGTCCACCAGGTAAAGCTAA+AGG 0.524247 2:+7015842 None:intergenic
AATCGGAAAAGGAGAAGTTC+TGG 0.525636 2:+7016123 None:intergenic
TCATTATCTCGAGGAGGAGA+TGG 0.525718 2:+7015956 None:intergenic
CTTGTGTGGAGGCACAGTTA+GGG 0.526600 2:-7017007 MsaT006571.1:CDS
AGGAGCTAGTGATCTTGGAC+GGG 0.526845 2:-7010346 MsaT006571.1:CDS
GTCTACAGGTCTCTACCCCT+TGG 0.527484 2:-7012233 MsaT006571.1:CDS
TTGAAGGGAGTATATCTTGA+TGG 0.527833 2:+7010471 None:intergenic
GCTGCCTCAAACTCTCTGTT+AGG 0.527899 2:+7010447 None:intergenic
TTTCTGCCCAGGCACAGGTC+CGG 0.528079 2:-7012348 MsaT006571.1:CDS
CATTTGACGGAAATGTTTGG+TGG 0.528443 2:+7011367 None:intergenic
TCTCCCCTAACAGATGGGAT+AGG 0.529720 2:-7009894 MsaT006571.1:CDS
GTTCTGGCAGGACCCTCCAT+TGG 0.529811 2:+7016139 None:intergenic
GAAAATCCTTTAGCTTTACC+TGG 0.531273 2:-7015848 MsaT006571.1:CDS
TAGAATAGCTAAAGAGTCTA+CGG 0.531468 2:-7015118 MsaT006571.1:CDS
GTTGCAAGGACACCTTCTAC+AGG 0.531536 2:-7014236 MsaT006571.1:CDS
AACCAGAGTTCAACTCATGA+AGG 0.532603 2:+7011619 None:intergenic
AACCATTTGCTATCCAGCCC+TGG 0.532632 2:-7014840 MsaT006571.1:CDS
CTCCCCTAACAGATGGGATA+GGG 0.534441 2:-7009893 MsaT006571.1:CDS
ACCCTTCATGAGTTGAACTC+TGG 0.536420 2:-7011621 MsaT006571.1:CDS
CTCCATTGCAGGCAATGGCA+AGG 0.537404 2:-7016249 MsaT006571.1:intron
TCTACTTATTGAAAAGCCAT+TGG 0.537504 2:-7012381 MsaT006571.1:CDS
GGTAGATGTTCATTTCCAAT+CGG 0.538274 2:+7016106 None:intergenic
CATACATCTCCTCTGCTATG+TGG 0.538744 2:+7012255 None:intergenic
GCTGTTGAAGATTTGTTGCT+GGG 0.539538 2:-7010153 MsaT006571.1:CDS
CCAAATGCATCAGGTGGCAA+TGG 0.540389 2:+7016939 None:intergenic
GAAGGAGTTACCGGTTAAGA+AGG 0.540575 2:-7017228 MsaT006571.1:CDS
AATTTATTTCCAGCAAGTGA+TGG 0.541225 2:+7012536 None:intergenic
GTAATGATCCTGGTTCTGGC+AGG 0.541880 2:-7012160 MsaT006571.1:CDS
AAGAGAAAGAGGCAGAGAGA+AGG 0.542103 2:-7015170 MsaT006571.1:CDS
GGACAGGGAACACAAGGACA+AGG 0.543077 2:-7010225 MsaT006571.1:CDS
GCCAATATCGGTTACGCCTG+CGG 0.543579 2:+7012204 None:intergenic
TTCACTGATCACCAAATTGG+TGG 0.543758 2:-7015875 MsaT006571.1:CDS
CGTTTGCCCGGATGGAGTTG+AGG 0.544889 2:-7017097 MsaT006571.1:CDS
GTATTGGCTACGTTTGGGTG+AGG 0.545600 2:+7015914 None:intergenic
GTTATGAGTGAAGGATCAGA+TGG 0.545974 2:-7009751 MsaT006571.1:CDS
CACTGCTTGAGCATCATCAT+CGG 0.546864 2:+7009957 None:intergenic
CACTGCTTGAGCATCATCAT+CGG 0.546864 2:+7009984 None:intergenic
AAGAAAGGATGATGCGTGAG+AGG 0.547193 2:-7015411 MsaT006571.1:CDS
TCTGCTTCTAGTAATGATCC+TGG 0.547326 2:-7012170 MsaT006571.1:CDS
GGTGACTCATAATAACTCCT+TGG 0.549115 2:+7017059 None:intergenic
GCCAGTCATAGTTCCAAGGA+TGG 0.550081 2:-7010120 MsaT006571.1:CDS
CAGGTCTCTACCCCTTGGCC+AGG 0.550807 2:-7012228 MsaT006571.1:CDS
ACTGGATTCACGCGGGATCA+GGG 0.551277 2:-7011817 MsaT006571.1:CDS
GGATTAGGAGTGAACCAGAA+TGG 0.551830 2:-7014215 MsaT006571.1:CDS
TTACTGTCGTAGGCAAGACT+AGG 0.551843 2:+7016445 None:intergenic
ATTCCCAGAAGGGTGATGAT+GGG 0.552822 2:-7017603 MsaT006571.1:CDS
GAGTTGGCTGCAGCAAGCAA+GGG 0.553572 2:-7015063 MsaT006571.1:CDS
TATGACTCCTGTTCACATTG+GGG 0.553796 2:-7010043 MsaT006571.1:CDS
GACTCATAATAACTCCTTGG+AGG 0.553883 2:+7017062 None:intergenic
AACCTATGTCTCGATCTTCG+AGG 0.553945 2:+7013590 None:intergenic
ATAAGTAGACTCTGTGCAGA+AGG 0.555078 2:+7012395 None:intergenic
TAATGATGTTGTCCCCAAAA+GGG 0.555094 2:-7015939 MsaT006571.1:CDS
AAAAGAAAGCTGCCTTGAGA+AGG 0.555107 2:-7011545 MsaT006571.1:CDS
TCGGAACAAACGGATATTCA+GGG 0.555690 2:+7016221 None:intergenic
CAAGCAGTGGAATATGATCA+TGG 0.556622 2:-7009943 MsaT006571.1:CDS
GAATAGTAACAGTGCTGAAG+AGG 0.557689 2:-7010013 MsaT006571.1:CDS
TTAATATTGATGTCGAGCAA+TGG 0.557741 2:+7012470 None:intergenic
GAGGAGCTAGTGATCTTGGA+CGG 0.557903 2:-7010347 MsaT006571.1:CDS
TCTATCCTTGTTGTCTCCGA+AGG 0.558466 2:+7017323 None:intergenic
TGAGAAACTTGAGCCTGTTG+AGG 0.558499 2:-7010629 MsaT006571.1:CDS
ATACATCTCCTCTGCTATGT+GGG 0.559503 2:+7012256 None:intergenic
GATTGAAGCGTGAGCAAAGG+CGG 0.560756 2:-7015372 MsaT006571.1:CDS
TGTTGAAAGAGAAGAAGAGT+CGG 0.560811 2:-7013170 MsaT006571.1:CDS
CTGTTGCAGAACAGCAGAAG+CGG 0.560950 2:-7016468 MsaT006571.1:CDS
CACAATCTCTGGATGGCCAC+CGG 0.561415 2:+7014178 None:intergenic
TTGAGACGATAGGCGAGCAC+GGG 0.564587 2:+7016054 None:intergenic
TAGTAACAGTGCTGAAGAGG+TGG 0.566184 2:-7010010 MsaT006571.1:CDS
TTTATGTTAGGCATATACAT+GGG 0.567216 2:-7014060 MsaT006571.1:intron
ATCTTTGTTGAACATCATGA+TGG 0.567442 2:-7012137 MsaT006571.1:CDS
CGGTGTCTCCCCTAACAGAT+GGG 0.568914 2:-7009899 MsaT006571.1:CDS
GATTTAGTAAATCCTTCAAG+TGG 0.569152 2:-7013112 MsaT006571.1:CDS
AACATCATGATGGTAGTTGG+AGG 0.569582 2:-7012127 MsaT006571.1:CDS
GCAGCAGCTCTTGATCATGA+TGG 0.570686 2:-7010429 MsaT006571.1:CDS
TGGCATTGAAGAGAATGAAG+AGG 0.570946 2:-7009791 MsaT006571.1:CDS
TAGGACTGCCAGATCCTGAA+TGG 0.571093 2:+7011649 None:intergenic
CAGTGACCTTAACGTTTCGA+CGG 0.571102 2:+7010277 None:intergenic
TTCACTCATAACATCTTCCT+CGG 0.571733 2:+7009762 None:intergenic
TGTACGAACTGCATTTAGAC+AGG 0.572915 2:-7013284 MsaT006571.1:CDS
AGTTGTCCGGACCTGTGCCT+GGG 0.572957 2:+7012342 None:intergenic
TCTCGAGGAGGAGATGGATA+GGG 0.573399 2:+7015962 None:intergenic
ACGGTGTCTCCCCTAACAGA+TGG 0.573565 2:-7009900 MsaT006571.1:CDS
ATTGAAGCGTGAGCAAAGGC+GGG 0.573861 2:-7015371 MsaT006571.1:CDS
TTGTAACTGCAGGGAAGAAG+TGG 0.574009 2:-7013695 MsaT006571.1:intron
CAGGGAACACAAGGACAAGG+GGG 0.575472 2:-7010222 MsaT006571.1:CDS
AAAGGCTAGATCGTGAGAGA+AGG 0.577153 2:-7015441 MsaT006571.1:CDS
TCGAGACATAGGTTAACTCC+AGG 0.579279 2:-7013581 MsaT006571.1:CDS
ACAGTTAGAATTGATGGAGT+TGG 0.580281 2:-7015079 MsaT006571.1:CDS
GTTGAGACGATAGGCGAGCA+CGG 0.580372 2:+7016053 None:intergenic
TTTATGTGCAATAAAATTTG+GGG 0.580757 2:-7011472 MsaT006571.1:CDS
CCAGATCCTGAATGGCACTC+GGG 0.581063 2:+7011657 None:intergenic
GACAGGGAACACAAGGACAA+GGG 0.581330 2:-7010224 MsaT006571.1:CDS
CGGTGGCCATCCAGAGATTG+TGG 0.581934 2:-7014177 MsaT006571.1:CDS
TTCCCAGAAGGGTGATGATG+GGG 0.582040 2:-7017602 MsaT006571.1:CDS
AACATATCAGATCTAATGCT+AGG 0.582335 2:+7016193 None:intergenic
TTGTGTGGAGGCACAGTTAG+GGG 0.582443 2:-7017006 MsaT006571.1:CDS
CACATTCCTCAACTCCATCC+GGG 0.583117 2:+7017091 None:intergenic
GCTTAGAGCAATTGCTTGTG+TGG 0.583221 2:-7017021 MsaT006571.1:CDS
GAGGCTTATTGATTCTGAAG+AGG 0.583561 2:-7012108 MsaT006571.1:intron
AAAGAGATGCAAACCTCAGG+TGG 0.585260 2:-7011448 MsaT006571.1:CDS
CTCCTTCCACAATCTCTGGA+TGG 0.585762 2:+7014171 None:intergenic
ACCCCATTTATACGATCCAA+TGG 0.586523 2:-7016155 MsaT006571.1:CDS
CTCCTCGAAGATCGAGACAT+AGG 0.586525 2:-7013592 MsaT006571.1:CDS
ATAGGTCCATCTTCCCTCAA+AGG 0.587067 2:+7016981 None:intergenic
CAAAACCTTGAATCATTTAG+GGG 0.587289 2:-7015003 MsaT006571.1:intron
AAGCATTTCAAGTTGAAAAG+GGG 0.587938 2:+7017483 None:intergenic
AATGGAGCTGCTAATCCTGC+CGG 0.588544 2:-7014197 MsaT006571.1:CDS
TCACCTCCATACATGACAGC+AGG 0.588857 2:+7011244 None:intergenic
AACTCATGAAGGGTACTGCT+AGG 0.590927 2:+7011630 None:intergenic
AGTGGAAACAAACGTGGGCG+AGG 0.591012 2:-7010366 MsaT006571.1:CDS
CCATTTATACGATCCAATGG+AGG 0.591874 2:-7016152 MsaT006571.1:CDS
TCTTGTTCTGAGTTGATCCA+GGG 0.591926 2:+7014823 None:intergenic
ATCAACTCAGAACAAGATGT+TGG 0.592070 2:-7014817 MsaT006571.1:CDS
AGATGTTGGCAATCTTCTCA+TGG 0.595503 2:-7014803 MsaT006571.1:intron
TGACGATGCCAGAGTTGCCA+AGG 0.595709 2:-7015656 MsaT006571.1:CDS
TTTGAAGATGAAGAAGACAA+TGG 0.596358 2:-7009835 MsaT006571.1:CDS
GCAGAGAATAATTCCCAGAA+GGG 0.596544 2:-7017613 MsaT006571.1:CDS
CGGATCGACAGTTACAGATG+TGG 0.596696 2:-7017277 MsaT006571.1:CDS
CTTGTAATGAATATGGATCC+GGG 0.597441 2:-7017139 MsaT006571.1:CDS
TCTTGTTGCATTGGTTGGTG+TGG 0.597711 2:-7012777 MsaT006571.1:CDS
GCTTGTCCTGTTGAGACGAT+AGG 0.597986 2:+7016044 None:intergenic
TTGGTTGGTGTGGCAAATGA+AGG 0.598262 2:-7012767 MsaT006571.1:CDS
CTAAGCTCCATTATAGTCTG+TGG 0.598730 2:+7017038 None:intergenic
AGTTGGCTGCAGCAAGCAAG+GGG 0.599292 2:-7015062 MsaT006571.1:CDS
TTATGGAAAACTTGTCCACC+AGG 0.599861 2:+7015830 None:intergenic
AAGCAAGTCTGGAGAACCAT+GGG 0.599961 2:-7012858 MsaT006571.1:CDS
GAACCATTCTCAGGAAAACA+AGG 0.600045 2:+7012977 None:intergenic
AAAATCTTGATACCTTCTCA+AGG 0.600897 2:+7011533 None:intergenic
TTATGTTAGGCATATACATG+GGG 0.601490 2:-7014059 MsaT006571.1:intron
GGTAAAGAGATGCAAACCTC+AGG 0.602721 2:-7011451 MsaT006571.1:CDS
ACCGGTTAAGAAGGTGCGAA+AGG 0.603062 2:-7017219 MsaT006571.1:CDS
GGAATGTGGTGCCTCCTCCA+AGG 0.603095 2:-7017076 MsaT006571.1:CDS
AGTCAGAAATTAAAACAGCA+GGG 0.604689 2:-7010246 MsaT006571.1:CDS
TTGGTGGCAGGAATTGCAAT+GGG 0.605005 2:+7011383 None:intergenic
GCGTGAGAGGCAGAGAGAAG+AGG 0.605131 2:-7015398 MsaT006571.1:CDS
GCTAGAGCCAGAACCTGACC+CGG 0.605133 2:+7017121 None:intergenic
TAGAGCAATTGCTTGTGTGG+AGG 0.605595 2:-7017018 MsaT006571.1:CDS
GAGGAAGATGTTATGAGTGA+AGG 0.605686 2:-7009760 MsaT006571.1:CDS
TGATGCCAAAAGAATATCAA+AGG 0.605957 2:+7011839 None:intergenic
AGCAACTGATTCAGGATCAG+AGG 0.606930 2:+7010735 None:intergenic
CCTGAGAGACAATGCTGCAG+TGG 0.609264 2:+7010690 None:intergenic
GGAAAAGGAGAAGTTCTGGC+AGG 0.609307 2:+7016127 None:intergenic
GGCCATCCAGAGATTGTGGA+AGG 0.611302 2:-7014173 MsaT006571.1:CDS
CGCCTGCGGTCCTGGCCAAG+GGG 0.612330 2:+7012218 None:intergenic
GGGTGGACGAGGTCGCCGAA+CGG 0.612585 2:-7010202 MsaT006571.1:CDS
GACACATATCCTGCTGTGGA+GGG 0.615224 2:-7012503 MsaT006571.1:CDS
AAATTAAAACAGCAGGGACA+GGG 0.615318 2:-7010240 MsaT006571.1:CDS
AGCAGAGAATAATTCCCAGA+AGG 0.615412 2:-7017614 MsaT006571.1:CDS
AAAGATTGAAGCGTGAGCAA+AGG 0.615457 2:-7015375 MsaT006571.1:CDS
CGATGATGATGCTCAAGCAG+TGG 0.616148 2:-7009956 MsaT006571.1:CDS
CGATGATGATGCTCAAGCAG+TGG 0.616148 2:-7009983 MsaT006571.1:CDS
TCATAATAACTCCTTGGAGG+AGG 0.617069 2:+7017065 None:intergenic
GCAGTGGTTAGAGGAACCCA+TGG 0.617087 2:+7010706 None:intergenic
TAATGACACGGTCTTGCGGG+TGG 0.618633 2:-7015810 MsaT006571.1:CDS
GGAGCTGCTAATCCTGCCGG+TGG 0.618742 2:-7014194 MsaT006571.1:CDS
CTGTGCAAATGATAAAGAAG+AGG 0.619387 2:-7013916 MsaT006571.1:intron
GAATGAAGAGGAAGATTCCG+AGG 0.619902 2:-7009779 MsaT006571.1:CDS
AAAATTGGAAGCAAAGGGGA+AGG 0.621545 2:-7011717 MsaT006571.1:CDS
CATATCCTTCGGAGACAACA+AGG 0.621717 2:-7017328 MsaT006571.1:CDS
AGACACATATCCTGCTGTGG+AGG 0.621953 2:-7012504 MsaT006571.1:CDS
AATCCTTTAGCTTTACCTGG+TGG 0.623781 2:-7015845 MsaT006571.1:CDS
AATTCACCTCAAGAATAATG+CGG 0.623958 2:+7012735 None:intergenic
AATGGCAACGATAATGACAT+TGG 0.629326 2:-7009817 MsaT006571.1:CDS
GTTGAGTAAATCATCATCCG+TGG 0.630562 2:-7011025 MsaT006571.1:CDS
GGAAAGCGATGAAGTTGATG+AGG 0.630670 2:-7013149 MsaT006571.1:CDS
TTCAGCAGCCGTAAGTGCAG+TGG 0.630745 2:-7013642 MsaT006571.1:CDS
CATTTATACGATCCAATGGA+GGG 0.631045 2:-7016151 MsaT006571.1:CDS
AGCAGCCAGTCATAGTTCCA+AGG 0.631087 2:-7010124 MsaT006571.1:CDS
AAGACATTGAAGATGTTGCA+AGG 0.631865 2:-7014250 MsaT006571.1:CDS
CAGAAATCATGAGCTACCAA+TGG 0.632982 2:+7012365 None:intergenic
GAATGAGGAAAGAAATGGAA+AGG 0.633242 2:-7015459 MsaT006571.1:CDS
AACCTGTAACAGTTCCTCCA+CGG 0.633854 2:+7011008 None:intergenic
AAGGCGGGAGATAGAACGAA+GGG 0.634531 2:-7015356 MsaT006571.1:CDS
GTAGGAGAATCCAGCAAAGG+TGG 0.635408 2:+7017194 None:intergenic
TGGAATGAGTGATGAAGATG+TGG 0.636934 2:-7009863 MsaT006571.1:CDS
GCTAGATCGTGAGAGAAGGA+AGG 0.638032 2:-7015437 MsaT006571.1:CDS
TTAGGATTAGGCTCATGAGT+AGG 0.638513 2:+7017176 None:intergenic
AGCACTGCAGAAAACCAAAG+AGG 0.638839 2:-7012422 MsaT006571.1:CDS
TTATATTTCCCACATAGCAG+AGG 0.640331 2:-7012264 MsaT006571.1:CDS
AAGATTATGAGTTCAGGTGA+AGG 0.645099 2:-7017535 MsaT006571.1:CDS
GCACGAAGTGGAAACAAACG+TGG 0.646195 2:-7010372 MsaT006571.1:CDS
CCGGAGGTTGAAAGACAAGA+AGG 0.646614 2:-7017246 MsaT006571.1:CDS
ATCCCTATCCCATCTGTTAG+GGG 0.647687 2:+7009891 None:intergenic
CCGGATGGAGTTGAGGAATG+TGG 0.648928 2:-7017090 MsaT006571.1:CDS
TAACTCAAGAGCATCAGCAA+AGG 0.649265 2:+7014477 None:intergenic
TCCCAGAAGGGTGATGATGG+GGG 0.649850 2:-7017601 MsaT006571.1:CDS
AAAGCAAGTCTGGAGAACCA+TGG 0.650686 2:-7012859 MsaT006571.1:CDS
ACCAGAGTTCAACTCATGAA+GGG 0.657800 2:+7011620 None:intergenic
GGGACAACATCATTATCTCG+AGG 0.657915 2:+7015947 None:intergenic
TCCATTGGATCGTATAAATG+GGG 0.658194 2:+7016154 None:intergenic
AAAGGCGGGAGATAGAACGA+AGG 0.661832 2:-7015357 MsaT006571.1:CDS
TGGAGCATTCTCTTCCTCTG+AGG 0.662209 2:-7011284 MsaT006571.1:CDS
TTTGGTGGCAGGAATTGCAA+TGG 0.662398 2:+7011382 None:intergenic
GGAGCTAGTGATCTTGGACG+GGG 0.663804 2:-7010345 MsaT006571.1:CDS
ATTTCACAAATATCCACCTG+AGG 0.663951 2:+7011435 None:intergenic
TTGGCATCACTGGATTCACG+CGG 0.664248 2:-7011825 MsaT006571.1:CDS
GGTTGTTTGATGACAGAAGT+GGG 0.664310 2:+7012938 None:intergenic
ACAAGACACATATCCTGCTG+TGG 0.665387 2:-7012507 MsaT006571.1:CDS
TGGGTTCAAGGACTTACGGA+AGG 0.666684 2:-7012839 MsaT006571.1:CDS
TGAGTAGGAGAATCCAGCAA+AGG 0.670491 2:+7017191 None:intergenic
TGGCATCACTGGATTCACGC+GGG 0.670717 2:-7011824 MsaT006571.1:CDS
AGAACTTAAATCAATTGACA+TGG 0.674041 2:-7014013 MsaT006571.1:CDS
TTAAGCAATCTTGTCCTCAG+AGG 0.675185 2:+7011270 None:intergenic
AGAGTCTACGGAGCTCATTG+AGG 0.677792 2:-7015106 MsaT006571.1:CDS
GGTGCCCCAAATGCATCAGG+TGG 0.681774 2:+7016933 None:intergenic
CTAGTACATTCAAACCTTTG+GGG 0.684269 2:+7013516 None:intergenic
GGTCCTGCTGTCATGTATGG+AGG 0.686922 2:-7011247 MsaT006571.1:intron
GAGTAAATCATCATCCGTGG+AGG 0.687342 2:-7011022 MsaT006571.1:CDS
TTTGGGCGGGAAAACACACA+AGG 0.689842 2:+7014879 None:intergenic
AATAGAGTAGTGAATGTAGG+GGG 0.694338 2:-7009721 MsaT006571.1:CDS
GCGGGTGGAGAAGAAACGAA+AGG 0.699282 2:-7015795 MsaT006571.1:intron
TGGTTGTTTGATGACAGAAG+TGG 0.699422 2:+7012937 None:intergenic
ACAACATCATTATCTCGAGG+AGG 0.702218 2:+7015950 None:intergenic
GAATAGAGTAGTGAATGTAG+GGG 0.704575 2:-7009722 MsaT006571.1:CDS
CACGAAGTGGAAACAAACGT+GGG 0.731398 2:-7010371 MsaT006571.1:CDS
AATTGGGAGATAGGTTACAA+CGG 0.732052 2:-7009919 MsaT006571.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr2 gene 7009684 7017647 7009684 ID=MsaG006571
Chr2 mRNA 7009684 7017647 7009684 ID=MsaT006571.1;Parent=MsaG006571
Chr2 exon 7009684 7010499 7009684 ID=MsaT006571.1.exon18;Parent=MsaT006571.1
Chr2 CDS 7009684 7010499 7009684 ID=cds.MsaT006571.1;Parent=MsaT006571.1
Chr2 exon 7010606 7010869 7010606 ID=MsaT006571.1.exon17;Parent=MsaT006571.1
Chr2 CDS 7010606 7010869 7010606 ID=cds.MsaT006571.1;Parent=MsaT006571.1
Chr2 exon 7011011 7011115 7011011 ID=MsaT006571.1.exon16;Parent=MsaT006571.1
Chr2 CDS 7011011 7011115 7011011 ID=cds.MsaT006571.1;Parent=MsaT006571.1
Chr2 exon 7011248 7011862 7011248 ID=MsaT006571.1.exon15;Parent=MsaT006571.1
Chr2 CDS 7011248 7011862 7011248 ID=cds.MsaT006571.1;Parent=MsaT006571.1
Chr2 exon 7012109 7012660 7012109 ID=MsaT006571.1.exon14;Parent=MsaT006571.1
Chr2 CDS 7012109 7012660 7012109 ID=cds.MsaT006571.1;Parent=MsaT006571.1
Chr2 exon 7012742 7013416 7012742 ID=MsaT006571.1.exon13;Parent=MsaT006571.1
Chr2 CDS 7012742 7013416 7012742 ID=cds.MsaT006571.1;Parent=MsaT006571.1
Chr2 exon 7013496 7013705 7013496 ID=MsaT006571.1.exon12;Parent=MsaT006571.1
Chr2 CDS 7013496 7013705 7013496 ID=cds.MsaT006571.1;Parent=MsaT006571.1
Chr2 exon 7013917 7014072 7013917 ID=MsaT006571.1.exon11;Parent=MsaT006571.1
Chr2 CDS 7013917 7014072 7013917 ID=cds.MsaT006571.1;Parent=MsaT006571.1
Chr2 exon 7014172 7014324 7014172 ID=MsaT006571.1.exon10;Parent=MsaT006571.1
Chr2 CDS 7014172 7014324 7014172 ID=cds.MsaT006571.1;Parent=MsaT006571.1
Chr2 exon 7014432 7014518 7014432 ID=MsaT006571.1.exon9;Parent=MsaT006571.1
Chr2 CDS 7014432 7014518 7014432 ID=cds.MsaT006571.1;Parent=MsaT006571.1
Chr2 exon 7014804 7014904 7014804 ID=MsaT006571.1.exon8;Parent=MsaT006571.1
Chr2 CDS 7014804 7014904 7014804 ID=cds.MsaT006571.1;Parent=MsaT006571.1
Chr2 exon 7015004 7015226 7015004 ID=MsaT006571.1.exon7;Parent=MsaT006571.1
Chr2 CDS 7015004 7015226 7015004 ID=cds.MsaT006571.1;Parent=MsaT006571.1
Chr2 exon 7015327 7015491 7015327 ID=MsaT006571.1.exon6;Parent=MsaT006571.1
Chr2 CDS 7015327 7015491 7015327 ID=cds.MsaT006571.1;Parent=MsaT006571.1
Chr2 exon 7015591 7015680 7015591 ID=MsaT006571.1.exon5;Parent=MsaT006571.1
Chr2 CDS 7015591 7015680 7015591 ID=cds.MsaT006571.1;Parent=MsaT006571.1
Chr2 exon 7015796 7016260 7015796 ID=MsaT006571.1.exon4;Parent=MsaT006571.1
Chr2 CDS 7015796 7016260 7015796 ID=cds.MsaT006571.1;Parent=MsaT006571.1
Chr2 exon 7016411 7016490 7016411 ID=MsaT006571.1.exon3;Parent=MsaT006571.1
Chr2 CDS 7016411 7016490 7016411 ID=cds.MsaT006571.1;Parent=MsaT006571.1
Chr2 exon 7016928 7017356 7016928 ID=MsaT006571.1.exon2;Parent=MsaT006571.1
Chr2 CDS 7016928 7017356 7016928 ID=cds.MsaT006571.1;Parent=MsaT006571.1
Chr2 exon 7017467 7017647 7017467 ID=MsaT006571.1.exon1;Parent=MsaT006571.1
Chr2 CDS 7017467 7017647 7017467 ID=cds.MsaT006571.1;Parent=MsaT006571.1
Gene Sequence

>MsaT006571.1

ATGGAAGCTGAAGCAGAGAATAATTCCCAGAAGGGTGATGATGGGGGTGAAAATAGTAATGAAAATTTCAACAACAATGTAAGTAACAGCAAGATTATGAGTTCAGGTGAAGGTCAAAGCAAACCTAAGAGACAGATGAAAACCCCTTTTCAACTTGAAATGCTTGAGAAAGCTTATGCTTTGGAGACATATCCTTCGGAGACAACAAGGATAGAGTTGTCTGAGAAGTTGGGGTTGTCGGATCGACAGTTACAGATGTGGTTTTGTCACCGGAGGTTGAAAGACAAGAAGGAGTTACCGGTTAAGAAGGTGCGAAAGGCGCCACCTTTGCTGGATTCTCCTACTCATGAGCCTAATCCTAAGTTGATTCTGGAGCCTTGTAATGAATATGGATCCGGGTCAGGTTCTGGCTCTAGCCCGTTTGCCCGGATGGAGTTGAGGAATGTGGTGCCTCCTCCAAGGAGTTATTATGAGTCACCACAGACTATAATGGAGCTTAGAGCAATTGCTTGTGTGGAGGCACAGTTAGGGGAGCCTTTGAGGGAAGATGGACCTATTTTGGGAATTGAGTTTGATCCATTGCCACCTGATGCATTTGGGGCACCCTTAGCTGTTGCAGAACAGCAGAAGCGGCCTAGTCTTGCCTACGACAGTAAAATATACGAAAGACATGAAGTTAGAACGAATAAGGCAATGGCAAGGACATTCCCTGAATATCCGTTTGTTCCGAACCAGCCTAGCATTAGATCTGATATGTTTGGACAATTGAGTCAACCCCATTTATACGATCCAATGGAGGGTCCTGCCAGAACTTCTCCTTTTCCGATTGGAAATGAACATCTACCTAGAATTCATGGAACTCAAAGCCATTCTTCCCGTGCTCGCCTATCGTCTCAACAGGACAAGCCTGTGACTCCCTATACTTCCCCTCCTCCCTTTTTGTCTCAGCAGGACAAGCAATCAATTCCCTATCCATCTCCTCCTCGAGATAATGATGTTGTCCCCAAAAGGGAACCTCACCCAAACGTAGCCAATACTGGCATTAACTCCCAATTCACTGATCACCAAATTGGTGGACAAGAAAATCCTTTAGCTTTACCTGGTGGACAAGTTTTCCATAATGACACGGTCTTGCGGGTGGAGAAGAAACGAAAGACTGACGATGCCAGAGTTGCCAAGGAAGTTGAAGCCTATGAAATAAGGATGAAGAAAGAACTTGAGAAACAAGATATCTTAAGAAGAAAGAATGAAGAGCGAATGAGGAAAGAAATGGAAAGGCTAGATCGTGAGAGAAGGAAGGAAGAAGAAAGGATGATGCGTGAGAGGCAGAGAGAAGAGGAAAGATTGAAGCGTGAGCAAAGGCGGGAGATAGAACGAAGGGAAAAATATATGATGAAAGAACATTTAAGAGCTGAGAAAAGGAAGCAAAAAGAAGAGATTCGCAAAGAGAAAGAGGCAGAGAGAAGGAAAGCTGCCCTTGAAAAGGCAAATGCTCGTAGAATAGCTAAAGAGTCTACGGAGCTCATTGAGGATGAACAGTTAGAATTGATGGAGTTGGCTGCAGCAAGCAAGGGGCTTTCCTCTATCATCCATATTGATCTTGATACTTTGCAAAACCTTGAATCATTTAGGGATTCCTTGTGTGTTTTCCCGCCCAAAAGTGTAAAGCTAAAAAAACCATTTGCTATCCAGCCCTGGATCAACTCAGAACAAGATGTTGGCAATCTTCTCATGGTTTGGAGATTCTTGATTACCTTTGCTGATGCTCTTGAGTTATGGCCTTTTACTCTTGATGAATTTGTACAAGCATTTCATGATTATGATTCAAGATTGTTGGGTGAGATACATGTTGCTGTTCTTAAAATGATAATAAAAGACATTGAAGATGTTGCAAGGACACCTTCTACAGGATTAGGAGTGAACCAGAATGGAGCTGCTAATCCTGCCGGTGGCCATCCAGAGATTGTGGAAGGAGCATATACATGGGGCTTTGACATACGAAATTGGCAGAAGAACTTAAATCAATTGACATGGCCTGAAATTTTGCGACAGTTAGCACTATCTGCAGGATTTGGACCACAGTTGAAAAAAAGAAGTATTACCTGGTCCTGTGCAAATGATAAAGAAGAGGGAAGAAGTGGTGATGATGTCATTTCTACACTTCGTAATGGTTCAGCAGCCGTAAGTGCAGTGGCAAAAATGCGAGAGAAAGGTTTATTAGCTCCTCGAAGATCGAGACATAGGTTAACTCCAGGAACAGTTAAATTTGCAGCATTTCACGTTCTCTCTCTTGAGGGCCCCAAAGGTTTGAATGTACTAGAGCTTGCAGAGAAGATTCAGAAATCTGGTCTTCGGGACCTGACAACCAGCAAGACACCTGAAGCATCAATTTCTGTTGCTTTGACAAGAGATGGCAAACTTTTCGAAAGAATAGCTCCATCAACATATCGTGTACGAACTGCATTTAGACAGGATCCTGCAGATGCCGAGTCCATTCTTTCAGAAGCAAGAAAGAAAATCCAGATATTTGAAAATGGGTTTCTAGCTGGTGAAGATGCCGTTGATGTTGAAAGAGAAGAAGAGTCGGAAAGCGATGAAGTTGATGAGGATCCTGAAGACGATGATTTAGTAAATCCTTCAAGTGGAAACCAAAATTCAGTACAATACGATAATATGGATATTAGTTTGGTAAATGTAAAAGAAAATTTGGGCAATGATGTAGACGTTATTCAAAATAAGCTTGATGATACTGATCTGCCTTGTTTTCCTGAGAATGGTTCCAAGGATGCCGATTGTCCCACTTCTGTCATCAAACAACCAGTTGCGTGTGAAAATCTAAATACCGGAAATCTTGATGATAATATGGAAATCGATGAAAGCAAGTCTGGAGAACCATGGGTTCAAGGACTTACGGAAGGAGAATACTCTGATCTCAGTGTAGAAGAGCGTCTAAACGCTCTTGTTGCATTGGTTGGTGTGGCAAATGAAGGAAATTCAATCCGCATTATTCTTGAGGATCGATTGGAAGCAGCAAATGCTCTGAAAAAGCAAATGTGGGCTGAAGCACAAATAGATAAAGTTCGTCTGAAAGATGATTATATTAGTAAATTAGATTTTCCATCACTTGCTGGAAATAAATTTGAAACACAAGACACATATCCTGCTGTGGAGGGAAATCAAAGCCCATTGCTCGACATCAATATTAACAACATTAAGAATGAAGCATCACCCAGCACTGCAGAAAACCAAAGAGGAACTCCTTCTGCACAGAGTCTACTTATTGAAAAGCCATTGGTAGCTCATGATTTCTGCCCAGGCACAGGTCCGGACAACTCTCAGAGTCAGATGCATGCACAATATTCAAAAAGGTCACGATCACAGTTAAAATCTTATATTTCCCACATAGCAGAGGAGATGTATGTCTACAGGTCTCTACCCCTTGGCCAGGACCGCAGGCGTAACCGATATTGGCAGTTTGTTGCATCTGCTTCTAGTAATGATCCTGGTTCTGGCAGGATCTTTGTTGAACATCATGATGGTAGTTGGAGGCTTATTGATTCTGAAGAGGCCTTTGATATTCTTTTGGCATCACTGGATTCACGCGGGATCAGGGAGTCTCATTTGCGCTTAATGTTGCAAAAGATTGAGAAATCCTTTAGAGAAAATGTTCGAAAAAATACACAATATACAAAAATTGGAAGCAAAGGGGAAGGTTCTATGAAAACTGAAGCTGATGAAGCATATCCAGTGCCCGAGTGCCATTCAGGATCTGGCAGTCCTAGCAGTACCCTTCATGAGTTGAACTCTGGTTCATCTGAAACTTCATCATCCTTCAAAATTGAGCTTGGCAAAAGTGAGAATGAAAAGAAAGCTGCCTTGAGAAGGTATCAAGATTTTCAGAAGTGGATGTGGAAAGAATGCTATAATTCATCAATTTTATGTGCAATAAAATTTGGGGTAAAGAGATGCAAACCTCAGGTGGATATTTGTGAAATCTGTCTTGATCCTTATTTTATGGAAGACTCCCATTGCAATTCCTGCCACCAAACATTTCCGTCAAATGATGAATTTAATTTTTCTAAACACACATTTCAATGTGTTGGTAATTTATCCAAAGATATTATGGAGCATTCTCTTCCTCTGAGGACAAGATTGCTTAAGGTCCTGCTGTCATGTATGGAGGCATCTGTTCTCTCTGAAGCATTTGGAACAATTTGGACAACTGATTTTAGGAAGCGTTGGGGTGTGAAGTTGAGTAAATCATCATCCGTGGAGGAACTGTTACAGATGTTGACCTTATTTGAAAAAGCGCTACGGCGTGATTTTCTATCATCAAACTTCTCTACAACAGACGAATTGTTGGGATTAAGCAGTGTGTCAAAAAGTGCTGCACACGTGTCCTCTGATCCTGAATCAGTTGCTCTACTTCCATGGGTTCCTCTAACCACTGCAGCATTGTCTCTCAGGCTTTTTGAGTTTGATTCATCCATCAACTACGTAAAGCTTGAGAAACTTGAGCCTGTTGAGGAGAAAGAAGCAACAGAATACATTAGGCTTCCATCAAGATATACTCCCTTCAAGCCTAACAGAGAGTTTGAGGCAGCAGCTCTTGATCATGATGGATTCACCAAAGTTAAACCTTCTGCTAATAAAATTGCACGAAGTGGAAACAAACGTGGGCGAGGAGCTAGTGATCTTGGACGGGGTAAAAAGCTGTCTAAAAGAATGTACAATTCCAAACAAGATACTGGCCGTCGAAACGTTAAGGTCACTGAGAATCTAAGTCAGAAATTAAAACAGCAGGGACAGGGAACACAAGGACAAGGGGGTGGACGAGGTCGCCGAACGGTCAGAAAACGTAGAGTAGAAAAAAGAGCTGTTGAAGATTTGTTGCTGGGCCATGCAGCAGCCAGTCATAGTTCCAAGGATGGAAGAGAACCATTGAGAAACTTGGATGAAGAATGGGATGTAGAAAAATTTAGTCCTATGACTCCTGTTCACATTGGGGTTGCTGAGAATAGTAACAGTGCTGAAGAGGTGGAATCCGATGATGATGCTCAAGCAGTGGAATCCGATGATGATGCTCAAGCAGTGGAATATGATCATGGAAATTGGGAGATAGGTTACAACGGTGTCTCCCCTAACAGATGGGATAGGGATTTGGTTGGAATGAGTGATGAAGATGTGGACAATTTTGAAGATGAAGAAGACAATGGCAACGATAATGACATTGGTATTGGCATTGAAGAGAATGAAGAGGAAGATTCCGAGGAAGATGTTATGAGTGAAGGATCAGATGGAATGCTGAATAGAGTAGTGAATGTAGGGGGCTCCGAAGATGTTATGAGTGAAGATTCTTCTGATTAG
Protein sequence

>MsaT006571.1

MEAEAENNSQKGDDGGENSNENFNNNVSNSKIMSSGEGQSKPKRQMKTPFQLEMLEKAYALETYPSETTRIELSEKLGLSDRQLQMWFCHRRLKDKKELPVKKVRKAPPLLDSPTHEPNPKLILEPCNEYGSGSGSGSSPFARMELRNVVPPPRSYYESPQTIMELRAIACVEAQLGEPLREDGPILGIEFDPLPPDAFGAPLAVAEQQKRPSLAYDSKIYERHEVRTNKAMARTFPEYPFVPNQPSIRSDMFGQLSQPHLYDPMEGPARTSPFPIGNEHLPRIHGTQSHSSRARLSSQQDKPVTPYTSPPPFLSQQDKQSIPYPSPPRDNDVVPKREPHPNVANTGINSQFTDHQIGGQENPLALPGGQVFHNDTVLRVEKKRKTDDARVAKEVEAYEIRMKKELEKQDILRRKNEERMRKEMERLDRERRKEEERMMRERQREEERLKREQRREIERREKYMMKEHLRAEKRKQKEEIRKEKEAERRKAALEKANARRIAKESTELIEDEQLELMELAAASKGLSSIIHIDLDTLQNLESFRDSLCVFPPKSVKLKKPFAIQPWINSEQDVGNLLMVWRFLITFADALELWPFTLDEFVQAFHDYDSRLLGEIHVAVLKMIIKDIEDVARTPSTGLGVNQNGAANPAGGHPEIVEGAYTWGFDIRNWQKNLNQLTWPEILRQLALSAGFGPQLKKRSITWSCANDKEEGRSGDDVISTLRNGSAAVSAVAKMREKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGPKGLNVLELAEKIQKSGLRDLTTSKTPEASISVALTRDGKLFERIAPSTYRVRTAFRQDPADAESILSEARKKIQIFENGFLAGEDAVDVEREEESESDEVDEDPEDDDLVNPSSGNQNSVQYDNMDISLVNVKENLGNDVDVIQNKLDDTDLPCFPENGSKDADCPTSVIKQPVACENLNTGNLDDNMEIDESKSGEPWVQGLTEGEYSDLSVEERLNALVALVGVANEGNSIRIILEDRLEAANALKKQMWAEAQIDKVRLKDDYISKLDFPSLAGNKFETQDTYPAVEGNQSPLLDININNIKNEASPSTAENQRGTPSAQSLLIEKPLVAHDFCPGTGPDNSQSQMHAQYSKRSRSQLKSYISHIAEEMYVYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVEHHDGSWRLIDSEEAFDILLASLDSRGIRESHLRLMLQKIEKSFRENVRKNTQYTKIGSKGEGSMKTEADEAYPVPECHSGSGSPSSTLHELNSGSSETSSSFKIELGKSENEKKAALRRYQDFQKWMWKECYNSSILCAIKFGVKRCKPQVDICEICLDPYFMEDSHCNSCHQTFPSNDEFNFSKHTFQCVGNLSKDIMEHSLPLRTRLLKVLLSCMEASVLSEAFGTIWTTDFRKRWGVKLSKSSSVEELLQMLTLFEKALRRDFLSSNFSTTDELLGLSSVSKSAAHVSSDPESVALLPWVPLTTAALSLRLFEFDSSINYVKLEKLEPVEEKEATEYIRLPSRYTPFKPNREFEAAALDHDGFTKVKPSANKIARSGNKRGRGASDLGRGKKLSKRMYNSKQDTGRRNVKVTENLSQKLKQQGQGTQGQGGGRGRRTVRKRRVEKRAVEDLLLGHAAASHSSKDGREPLRNLDEEWDVEKFSPMTPVHIGVAENSNSAEEVESDDDAQAVESDDDAQAVEYDHGNWEIGYNGVSPNRWDRDLVGMSDEDVDNFEDEEDNGNDNDIGIGIEENEEEDSEEDVMSEGSDGMLNRVVNVGGSEDVMSEDSSD*