AlfalfaGEDB | MsaG006861

M. sativa ssp. caerulea / MsaG006861

KEGG: K11654
GO: GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006323 GO:0006325 GO:0006333 GO:0006996 GO:0007275 GO:0008150 GO:0009553 GO:0009561 GO:0009987 GO:0016043 GO:0016584 GO:0022607 GO:0031497 GO:0032501 GO:0032502 GO:0034728 GO:0040034 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044464 GO:0048229 GO:0048506 GO:0048509 GO:0048510 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051276 GO:0065007 GO:0071103 GO:0071824 GO:0071840 GO:0080134 GO:0080135 GO:1900034 GO:1900036
PFAM: PF13892.9

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG006861	XP_039686239.1	95.149	1072	14	3	1	1041	1	1065	0.0	2086

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG006861	sp\|Q8RWY3\|ISW2_ARATH	87.611	1009	98	6	40	1027	50	1052	0.0	1766

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG006861	tr\|G7ISH3\|G7ISH3_MEDTR	95.061	1073	14	4	1	1041	1	1066	0.0	2081

TFs/TRs:

Gene ID	Type	Classification
MsaG006861	TR	SNF2

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000802	MsaG006861	0.837232	1.075963e-56	3.854263e-54
MsaG001479	MsaG006861	0.840188	1.868328e-57	7.336506e-55
MsaG003749	MsaG006861	0.809820	2.676302e-50	4.550600e-48
MsaG004217	MsaG006861	0.800160	2.744160e-48	3.723580e-46
MsaG004507	MsaG006861	0.826730	4.117875e-54	1.086747e-51
MsaG004822	MsaG006861	0.818687	3.004743e-52	6.383979e-50
MsaG005020	MsaG006861	0.820034	1.486340e-52	3.272045e-50
MsaG005477	MsaG006861	0.814059	3.225037e-51	6.088291e-49
MsaG005577	MsaG006861	0.811776	1.014800e-50	1.809873e-48
MsaG005958	MsaG006861	0.811035	1.467258e-50	2.569739e-48
MsaG005960	MsaG006861	0.830842	4.212435e-55	1.248817e-52
MsaG006255	MsaG006861	0.811543	1.139470e-50	2.020664e-48
MsaG006283	MsaG006861	0.829432	9.270373e-55	2.639574e-52
MsaG006861	MsaG006868	0.813905	3.484820e-51	6.553703e-49
MsaG006861	MsaG006933	0.814926	2.077628e-51	4.008728e-49
MsaG006861	MsaG010871	0.827684	2.439181e-54	6.611309e-52
MsaG006861	MsaG011356	0.826244	5.368253e-54	1.397699e-51
MsaG006861	MsaG011366	0.836910	1.299213e-56	4.608797e-54
MsaG006861	MsaG011889	0.819299	2.184398e-52	4.716378e-50
MsaG006861	MsaG012643	0.855359	1.287155e-61	8.423907e-59
MsaG006861	MsaG017128	0.805972	1.745918e-49	2.707604e-47
MsaG006861	MsaG017298	0.848316	1.253806e-59	6.416587e-57
MsaG006861	MsaG018044	0.816285	1.038226e-51	2.073502e-49
MsaG006861	MsaG018481	0.804322	3.853251e-49	5.750670e-47
MsaG006861	MsaG018496	0.848167	1.378267e-59	7.018892e-57
MsaG006861	MsaG020527	0.812027	8.950168e-51	1.606143e-48
MsaG006861	MsaG021389	0.814743	2.279657e-51	4.378274e-49
MsaG006861	MsaG021576	0.853631	4.048607e-61	2.490665e-58
MsaG006861	MsaG021904	0.817841	4.659388e-52	9.685457e-50
MsaG006861	MsaG022065	0.845666	6.617442e-59	3.099594e-56
MsaG006861	MsaG022407	0.813505	4.263766e-51	7.938407e-49
MsaG006861	MsaG024222	0.801625	1.382187e-48	1.938701e-46
MsaG006861	MsaG025369	0.805850	1.852180e-49	2.864156e-47
MsaG006861	MsaG027249	0.804879	2.952396e-49	4.463456e-47
MsaG006861	MsaG028001	0.808563	4.961944e-50	8.184938e-48
MsaG006861	MsaG028031	0.806032	1.696113e-49	2.634100e-47
MsaG006861	MsaG029217	0.817472	5.638868e-52	1.161059e-49
MsaG006861	MsaG029548	0.832601	1.558818e-55	4.863606e-53
MsaG006861	MsaG029619	0.839937	2.169971e-57	8.454560e-55
MsaG006861	MsaG032487	0.814073	3.202204e-51	6.047366e-49
MsaG006861	MsaG034046	0.848141	1.400732e-59	7.127295e-57
MsaG006861	MsaG035059	0.804180	4.122983e-49	6.132956e-47
MsaG006861	MsaG041211	0.815023	1.977563e-51	3.825000e-49
MsaG006861	MsaG041663	0.811348	1.255895e-50	2.216485e-48
MsaG006861	MsaG041794	0.818664	3.040891e-52	6.457042e-50
MsaG006861	MsaG042769	0.807086	1.018849e-49	1.622185e-47
MsaG006861	MsaG043897	0.848979	8.229364e-60	4.307449e-57
MsaG006861	MsaG045184	0.831626	2.707946e-55	8.213267e-53
MsaG006861	MsaG045477	0.830469	5.193332e-55	1.523177e-52
MsaG006861	MsaG045706	0.826299	5.209784e-54	1.358512e-51
MsaG006861	MsaG046055	0.839644	2.585345e-57	9.980148e-55
MsaG006861	MsaG046556	0.805441	2.254664e-49	3.453348e-47
MsaG006861	MsaG000676	0.804895	2.929008e-49	4.429774e-47
MsaG006861	MsaG010140	0.812328	7.702868e-51	1.392597e-48
MsaG006861	MsaG009686	0.806971	1.077266e-49	1.710530e-47
MsaG006861	MsaG020999	0.820425	1.210528e-52	2.692619e-50
MsaG006861	MsaG030776	0.814914	2.089804e-51	4.031028e-49
MsaG006861	MsaG031767	0.837250	1.064739e-56	3.816106e-54
MsaG006861	MsaG040848	0.801283	1.623236e-48	2.259157e-46
MsaG006861	MsaG036760	0.860742	3.289309e-63	2.631190e-60
MsaG006861	MsaG037249	0.808396	5.385134e-50	8.847109e-48
MsaG006861	MsaG035247	0.818517	3.282192e-52	6.942787e-50

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG006861	MtrunA17_Chr2g0286291	95.061	1073	14	4	1	1041	1	1066	0.0	2081
MsaG006861	MtrunA17_Chr4g0066741	90.040	994	91	4	50	1041	76	1063	0.0	1821
MsaG006861	MtrunA17_Chr1g0205891	46.869	527	259	9	149	660	363	883	2.51e-160	502
MsaG006861	MtrunA17_Chr5g0394201	47.059	527	257	9	149	660	350	869	6.29e-159	498
MsaG006861	MtrunA17_Chr5g0403921	45.741	540	253	10	154	659	177	710	4.07e-152	470
MsaG006861	MtrunA17_Chr3g0095091	45.338	547	263	10	149	661	558	1102	1.49e-147	481
MsaG006861	MtrunA17_Chr5g0442141	47.399	519	243	8	149	639	604	1120	7.39e-145	474
MsaG006861	MtrunA17_Chr4g0066651	48.971	486	225	8	150	614	977	1460	7.89e-139	462
MsaG006861	MtrunA17_Chr7g0232121	38.776	588	311	15	157	700	35	617	5.88e-118	384
MsaG006861	MtrunA17_Chr4g0052341	40.585	547	288	12	150	673	733	1265	2.93e-111	381
MsaG006861	MtrunA17_Chr7g0248031	42.949	468	234	5	147	584	979	1443	9.84e-110	376
MsaG006861	MtrunA17_Chr8g0348721	42.463	471	231	8	147	584	972	1435	8.47e-106	365
MsaG006861	MtrunA17_Chr7g0231521	35.777	573	270	13	157	700	35	538	3.69e-101	336
MsaG006861	MtrunA17_Chr1g0163011	36.396	555	260	16	146	612	170	719	2.97e-88	300
MsaG006861	MtrunA17_Chr1g0175191	44.156	308	163	4	146	444	505	812	9.26e-80	286
MsaG006861	MtrunA17_Chr1g0175191	42.222	225	115	3	461	674	1061	1281	2.29e-42	169
MsaG006861	MtrunA17_Chr1g0183681	34.165	521	283	13	130	599	360	871	3.12e-77	276
MsaG006861	MtrunA17_Chr7g0257101	33.936	498	233	12	61	462	417	914	1.07e-74	270
MsaG006861	MtrunA17_Chr7g0257101	51.462	171	80	2	449	617	1177	1346	2.19e-45	179
MsaG006861	MtrunA17_Chr4g0017211	29.748	595	336	17	128	648	1418	2004	1.34e-65	243
MsaG006861	MtrunA17_Chr8g0384531	31.657	537	296	14	164	637	387	915	3.78e-65	239
MsaG006861	MtrunA17_Chr5g0393461	32.860	493	256	17	180	610	208	687	7.25e-62	228
MsaG006861	MtrunA17_Chr4g0040301	45.033	151	82	1	461	611	379	528	3.53e-32	134
MsaG006861	MtrunA17_Chr4g0040301	30.488	246	143	5	189	410	18	259	2.48e-21	100
MsaG006861	MtrunA17_Chr4g0069451	23.718	468	317	11	154	604	167	611	4.92e-32	134
MsaG006861	MtrunA17_Chr1g0190381	30.029	343	165	8	365	634	31	371	2.27e-30	127
MsaG006861	MtrunA17_Chr7g0264371	26.852	540	312	20	140	643	259	751	4.95e-28	122
MsaG006861	MtrunA17_Chr1g0168031	29.545	308	163	9	182	441	535	836	6.21e-28	122
MsaG006861	MtrunA17_Chr1g0168031	39.597	149	89	1	455	603	980	1127	1.56e-20	98.2
MsaG006861	MtrunA17_Chr7g0232971	27.717	368	205	7	286	611	904	1252	9.03e-27	118
MsaG006861	MtrunA17_Chr7g0233021	24.847	491	276	14	183	593	691	1168	1.17e-23	108
MsaG006861	MtrunA17_Chr2g0320751	25.076	327	178	7	182	441	399	725	4.80e-23	106
MsaG006861	MtrunA17_Chr2g0320751	34.228	149	95	2	471	617	859	1006	8.34e-17	85.9
MsaG006861	MtrunA17_Chr7g0233001	26.648	364	225	9	286	617	128	481	9.31e-22	100
MsaG006861	MtrunA17_Chr7g0225791	24.030	541	297	17	183	650	752	1251	1.35e-21	101
MsaG006861	MtrunA17_Chr4g0047081	23.791	517	290	14	183	617	702	1196	4.61e-21	100
MsaG006861	MtrunA17_Chr7g0255821	27.208	283	173	7	182	436	251	528	9.54e-21	98.6
MsaG006861	MtrunA17_Chr7g0255821	36.913	149	91	2	458	603	644	792	2.38e-19	94.0
MsaG006861	MtrunA17_Chr4g0024921	40.152	132	76	2	474	603	776	906	3.87e-20	96.7
MsaG006861	MtrunA17_Chr7g0233031	25.352	355	220	8	286	611	861	1199	3.64e-19	94.0
MsaG006861	MtrunA17_Chr1g0212331	41.525	118	68	1	480	597	887	1003	6.74e-19	92.8
MsaG006861	MtrunA17_Chr1g0212331	26.816	179	119	3	277	443	521	699	2.49e-14	77.8
MsaG006861	MtrunA17_Chr2g0281601	35.570	149	94	2	480	627	1150	1297	2.64e-18	90.9
MsaG006861	MtrunA17_Chr2g0281601	27.528	178	117	3	278	443	778	955	1.52e-14	79.0
MsaG006861	MtrunA17_Chr4g0039561	41.284	109	57	2	417	521	40	145	7.69e-17	80.1
MsaG006861	MtrunA17_Chr7g0214291	33.129	163	97	4	180	340	1	153	3.72e-16	77.8
MsaG006861	MtrunA17_Chr1g0190391	25.664	226	136	6	151	346	572	795	1.61e-14	78.6
MsaG006861	MtrunA17_Chr2g0326991	31.298	131	86	2	488	614	39	169	1.21e-13	75.9
MsaG006861	MtrunA17_Chr2g0320781	35.833	120	72	1	480	594	111	230	2.12e-13	71.2
MsaG006861	MtrunA17_Chr1g0149871	44.048	84	45	1	159	242	242	323	2.70e-13	72.4
MsaG006861	MtrunA17_Chr3g0086111	31.092	119	81	1	476	594	548	665	3.87e-13	74.3
MsaG006861	MtrunA17_Chr3g0086111	24.354	271	156	10	154	395	180	430	1.17e-12	72.8
MsaG006861	MtrunA17_Chr7g0232991	34.711	121	75	1	478	594	477	597	3.07e-12	70.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG006861	AT3G06400.2	87.611	1009	98	6	40	1027	50	1052	0.0	1766
MsaG006861	AT5G18620.2	83.996	1081	124	9	1	1041	1	1072	0.0	1765
MsaG006861	AT3G06400.1	87.512	1009	98	7	40	1027	50	1051	0.0	1760
MsaG006861	AT5G18620.1	83.904	1081	122	10	1	1041	1	1069	0.0	1757
MsaG006861	AT3G06400.3	87.339	1011	98	8	40	1027	50	1053	0.0	1756
MsaG006861	AT5G19310.2	48.000	525	255	9	149	660	109	628	4.44e-162	498
MsaG006861	AT3G06010.1	48.197	527	252	10	149	660	390	910	1.61e-159	501
MsaG006861	AT5G19310.1	48.000	525	255	9	149	660	373	892	6.77e-159	498
MsaG006861	AT2G13370.1	45.672	543	264	8	149	661	612	1153	7.89e-147	480
MsaG006861	AT2G13370.2	45.672	543	264	8	149	661	612	1153	7.89e-147	480
MsaG006861	AT2G13370.3	45.672	543	264	8	149	661	612	1153	7.89e-147	480
MsaG006861	AT5G66750.1	38.678	711	355	15	30	664	34	739	7.73e-146	454
MsaG006861	AT2G28290.6	49.177	486	218	8	153	614	746	1226	3.76e-138	461
MsaG006861	AT2G28290.1	49.177	486	218	8	153	614	745	1225	3.99e-138	461
MsaG006861	AT2G28290.2	49.177	486	218	8	153	614	745	1225	4.01e-138	461
MsaG006861	AT2G28290.3	49.177	486	218	8	153	614	745	1225	4.09e-138	461
MsaG006861	AT2G28290.4	49.177	486	218	8	153	614	745	1225	4.09e-138	461
MsaG006861	AT2G28290.5	49.177	486	218	8	153	614	746	1226	4.26e-138	461
MsaG006861	AT2G25170.2	45.155	516	249	7	154	643	283	790	4.01e-133	437
MsaG006861	AT2G25170.1	45.155	516	249	7	154	643	266	773	4.04e-133	437
MsaG006861	AT2G25170.4	45.155	516	249	7	154	643	266	773	4.04e-133	437
MsaG006861	AT2G25170.3	45.155	516	249	7	154	643	292	799	7.99e-133	436
MsaG006861	AT2G44980.1	41.700	506	270	11	152	636	38	539	5.91e-122	394
MsaG006861	AT2G44980.3	40.458	524	269	11	152	636	38	557	1.52e-119	388
MsaG006861	AT4G31900.2	42.315	501	259	8	154	643	177	658	5.54e-118	391
MsaG006861	AT4G31900.1	42.315	501	259	8	154	643	218	699	6.03e-118	392
MsaG006861	AT4G31900.3	42.315	501	259	8	154	643	218	699	7.91e-118	391
MsaG006861	AT2G44980.2	40.190	525	270	12	152	636	38	558	4.00e-117	382
MsaG006861	AT5G44800.1	39.753	566	300	11	150	685	677	1231	3.95e-112	384
MsaG006861	AT2G46020.2	43.949	471	225	7	147	584	966	1430	1.36e-108	374
MsaG006861	AT2G46020.3	43.949	471	225	7	147	584	966	1430	1.36e-108	374
MsaG006861	AT2G46020.4	43.949	471	225	7	147	584	966	1430	1.36e-108	374
MsaG006861	AT2G46020.5	43.737	471	225	8	147	584	966	1429	1.31e-106	367
MsaG006861	AT2G46020.1	43.737	471	225	8	147	584	966	1429	1.31e-106	367
MsaG006861	AT2G46020.6	43.737	471	225	8	147	584	966	1429	1.31e-106	367
MsaG006861	AT2G02090.1	37.522	557	255	13	146	614	188	739	1.92e-95	320
MsaG006861	AT3G12810.1	42.857	308	167	4	146	444	520	827	2.10e-77	280
MsaG006861	AT3G12810.1	43.056	216	116	3	461	676	1074	1282	2.14e-41	166
MsaG006861	AT3G12810.2	42.857	308	167	4	146	444	516	823	2.17e-77	280
MsaG006861	AT3G12810.2	43.056	216	116	3	461	676	1070	1278	2.21e-41	166
MsaG006861	AT2G18760.4	34.538	498	270	10	154	603	378	867	1.14e-76	275
MsaG006861	AT2G18760.1	34.538	498	270	10	154	603	378	867	1.14e-76	275
MsaG006861	AT2G18760.2	34.538	498	270	10	154	603	378	867	1.14e-76	275
MsaG006861	AT2G18760.7	34.538	498	270	10	154	603	378	867	1.14e-76	275
MsaG006861	AT2G18760.5	34.538	498	270	10	154	603	378	867	1.14e-76	275
MsaG006861	AT2G18760.6	34.538	498	270	10	154	603	378	867	1.14e-76	275
MsaG006861	AT2G18760.3	34.538	498	270	10	154	603	437	926	3.43e-76	274
MsaG006861	AT3G57300.1	33.051	472	229	9	61	446	422	892	3.92e-72	263
MsaG006861	AT3G57300.1	50.588	170	81	2	449	616	1191	1359	9.22e-44	174
MsaG006861	AT3G57300.4	33.051	472	229	9	61	446	422	892	3.92e-72	263
MsaG006861	AT3G57300.4	50.588	170	81	2	449	616	1191	1359	9.22e-44	174
MsaG006861	AT3G57300.3	33.051	472	229	9	61	446	422	892	4.26e-72	262
MsaG006861	AT3G57300.2	30.891	505	229	9	61	446	422	925	1.63e-68	252
MsaG006861	AT3G57300.2	50.588	170	81	2	449	616	1224	1392	1.04e-43	174
MsaG006861	AT3G54280.1	30.263	608	346	15	128	665	1419	2018	5.23e-68	251
MsaG006861	AT3G54280.2	30.263	608	346	15	128	665	1450	2049	5.89e-68	250
MsaG006861	AT5G63950.1	32.101	514	284	12	152	606	368	875	1.06e-67	247
MsaG006861	AT5G63950.2	33.002	503	277	12	152	606	368	858	2.84e-66	243
MsaG006861	AT3G19210.2	30.396	556	311	15	125	610	132	681	8.22e-64	234
MsaG006861	AT3G19210.3	30.645	558	309	17	125	610	132	683	2.60e-63	230
MsaG006861	AT3G19210.1	30.645	558	309	17	125	610	132	683	6.61e-63	231
MsaG006861	AT1G02670.6	27.916	523	270	15	182	603	118	634	2.62e-44	172
MsaG006861	AT1G02670.3	27.916	523	270	15	182	603	145	661	5.22e-44	171
MsaG006861	AT1G08600.4	27.946	594	312	21	151	633	709	1297	2.34e-43	172
MsaG006861	AT1G08600.3	27.946	594	312	21	151	633	709	1297	2.34e-43	172
MsaG006861	AT1G08600.2	27.946	594	312	21	151	633	709	1297	2.34e-43	172
MsaG006861	AT1G08600.1	27.711	581	309	20	151	633	709	1276	9.26e-42	167
MsaG006861	AT1G02670.1	27.921	505	270	14	182	603	156	649	1.92e-41	163
MsaG006861	AT1G02670.7	27.921	505	270	14	182	603	145	638	2.65e-41	162
MsaG006861	AT1G02670.5	26.984	504	261	15	182	584	118	615	3.85e-39	155
MsaG006861	AT1G02670.2	26.984	504	261	15	182	584	145	642	9.75e-39	154
MsaG006861	AT1G03750.1	42.857	154	87	1	458	611	524	676	2.17e-32	136
MsaG006861	AT1G03750.1	29.066	289	179	5	145	410	123	408	6.76e-31	131
MsaG006861	AT1G48310.2	24.788	472	307	12	154	604	170	614	9.29e-31	130
MsaG006861	AT1G48310.1	24.788	472	307	12	154	604	165	609	9.37e-31	130
MsaG006861	AT1G48310.3	24.788	472	307	12	154	604	165	609	1.91e-30	129
MsaG006861	AT5G43530.1	27.523	327	180	10	182	457	683	1003	1.82e-25	114
MsaG006861	AT5G43530.1	37.278	169	98	4	461	622	1108	1275	5.59e-21	100
MsaG006861	AT5G22750.1	26.220	328	172	7	181	441	414	738	6.23e-25	112
MsaG006861	AT5G22750.1	35.849	159	99	2	461	617	862	1019	7.73e-20	96.3
MsaG006861	AT1G05490.1	28.235	340	200	8	286	593	1008	1335	1.69e-24	111
MsaG006861	AT3G24340.1	24.680	547	303	18	165	632	591	1107	1.23e-23	108
MsaG006861	AT1G02670.4	26.332	319	178	9	182	448	145	458	1.13e-22	103
MsaG006861	AT2G21450.3	24.157	534	281	20	161	603	174	674	7.55e-21	99.0
MsaG006861	AT2G21450.2	24.157	534	281	20	161	603	272	772	7.74e-21	99.4
MsaG006861	AT2G21450.1	24.157	534	281	20	161	603	265	765	9.11e-21	99.0
MsaG006861	AT1G11100.5	40.323	124	73	1	480	603	930	1052	3.97e-20	97.4
MsaG006861	AT1G11100.5	24.781	343	186	9	164	439	402	739	4.24e-19	94.0
MsaG006861	AT5G05130.1	34.706	170	109	2	466	633	712	881	3.97e-20	97.1
MsaG006861	AT5G05130.1	27.915	283	170	11	214	476	361	629	1.61e-17	88.6
MsaG006861	AT1G05120.2	40.152	132	76	2	474	603	717	847	4.02e-20	97.1
MsaG006861	AT1G11100.3	40.323	124	73	1	480	603	974	1096	4.31e-20	97.1
MsaG006861	AT1G11100.3	28.736	174	112	3	278	439	610	783	5.30e-13	74.3
MsaG006861	AT1G05120.1	40.152	132	76	2	474	603	674	804	4.36e-20	97.1
MsaG006861	AT1G11100.2	40.323	124	73	1	480	603	1116	1238	5.88e-20	97.1
MsaG006861	AT1G11100.2	28.736	174	112	3	278	439	752	925	3.29e-13	74.7
MsaG006861	AT1G11100.4	40.323	124	73	1	480	603	1117	1239	5.88e-20	97.1
MsaG006861	AT1G11100.4	28.736	174	112	3	278	439	753	926	3.38e-13	74.7
MsaG006861	AT1G11100.1	40.323	124	73	1	480	603	1073	1195	6.24e-20	96.7
MsaG006861	AT1G11100.1	25.000	340	189	8	164	439	545	882	2.86e-19	94.7
MsaG006861	AT5G20420.1	24.092	523	297	20	183	618	714	1223	7.38e-20	96.7
MsaG006861	AT1G61140.3	37.692	130	80	1	474	603	961	1089	3.59e-19	94.4
MsaG006861	AT1G61140.3	27.933	179	117	3	278	444	624	802	7.75e-14	77.0
MsaG006861	AT1G61140.1	37.692	130	80	1	474	603	1119	1247	5.57e-19	93.6
MsaG006861	AT1G61140.1	27.933	179	117	3	278	444	782	960	6.64e-14	77.0
MsaG006861	AT3G20010.3	36.774	155	94	2	480	631	628	781	5.88e-19	93.2
MsaG006861	AT3G20010.3	26.966	178	118	3	278	443	271	448	3.38e-12	71.2
MsaG006861	AT3G20010.2	36.774	155	94	2	480	631	603	756	6.09e-19	93.2
MsaG006861	AT3G20010.2	26.630	184	123	3	278	449	246	429	2.63e-12	71.6
MsaG006861	AT3G20010.1	36.774	155	94	2	480	631	894	1047	7.11e-19	93.2
MsaG006861	AT3G20010.1	26.966	178	118	3	278	443	537	714	3.83e-12	71.2
MsaG006861	AT3G20010.5	36.774	155	94	2	480	631	894	1047	7.11e-19	93.2
MsaG006861	AT3G20010.5	26.966	178	118	3	278	443	537	714	3.83e-12	71.2
MsaG006861	AT3G20010.7	36.774	155	94	2	480	631	894	1047	7.11e-19	93.2
MsaG006861	AT3G20010.7	26.966	178	118	3	278	443	537	714	3.83e-12	71.2
MsaG006861	AT1G50410.2	35.484	155	96	2	480	631	828	981	4.81e-17	87.0
MsaG006861	AT1G50410.2	26.630	184	119	5	274	443	462	643	1.73e-12	72.4
MsaG006861	AT1G50410.1	35.484	155	96	2	480	631	828	981	4.81e-17	87.0
MsaG006861	AT1G50410.1	26.630	184	119	5	274	443	462	643	1.73e-12	72.4
MsaG006861	AT1G50410.3	35.484	155	96	2	480	631	828	981	4.81e-17	87.0
MsaG006861	AT1G50410.3	26.630	184	119	5	274	443	462	643	1.73e-12	72.4
MsaG006861	AT5G07810.1	31.746	126	85	1	479	604	555	679	2.17e-15	82.0
MsaG006861	AT1G48310.4	25.175	286	169	10	154	418	165	426	3.27e-14	77.0
MsaG006861	AT1G61140.2	27.933	179	117	3	278	444	789	967	5.67e-14	77.4
MsaG006861	AT1G50410.4	26.630	184	119	5	274	443	462	643	1.55e-12	72.4
MsaG006861	AT3G20010.4	26.966	178	118	3	278	443	537	714	3.30e-12	71.6
MsaG006861	AT3G20010.6	26.966	178	118	3	278	443	537	714	3.30e-12	71.6
MsaG006861	AT3G20010.8	26.966	178	118	3	278	443	537	714	3.30e-12	71.6
MsaG006861	AT3G16600.1	39.130	92	50	1	506	597	488	573	8.47e-12	69.7
MsaG006861	AT3G42670.2	29.747	158	105	3	461	613	1056	1212	1.83e-11	69.3
MsaG006861	AT3G42670.3	29.747	158	105	3	461	613	1056	1212	1.83e-11	69.3
MsaG006861	AT3G42670.1	29.747	158	105	3	461	613	1056	1212	1.83e-11	69.3
MsaG006861	AT3G42670.4	29.747	158	105	3	461	613	1058	1214	1.83e-11	69.3
MsaG006861	AT1G08060.1	29.121	182	107	5	432	597	523	698	4.19e-11	68.2
MsaG006861	AT1G08060.2	29.121	182	107	5	432	597	523	698	4.19e-11	68.2

Find 229 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CACCGTCTTCTTCTCCTTTC+AGG	0.140723	2:+10852265	None:intergenic
TTCTCATGTTTGCTTATTTC+AGG	0.173405	2:+10853804	None:intergenic
ATTGCAAACTATATCTTTAA+TGG	0.191793	2:-10851552	MsaT006861.1:CDS
CAATTTCCAAGAGTTGATTT+TGG	0.201468	2:+10851479	None:intergenic
CTCATTCGATTGTATGAAAA+TGG	0.219427	2:-10851785	MsaT006861.1:CDS
TTGTATGAAAATGGAATAAA+TGG	0.226548	2:-10851776	MsaT006861.1:CDS
ATTGGTCACCTTTCGCAAAA+TGG	0.227711	2:+10853543	None:intergenic
TGCAGGTAAAATGGTTCTTT+TGG	0.231699	2:-10849727	MsaT006861.1:intron
CAAAATCAACTCTTGGAAAT+TGG	0.232383	2:-10851478	MsaT006861.1:CDS
TCTCCCTCTCATCGTATTCT+TGG	0.237143	2:+10846794	None:intergenic
AATTTCATCTGCAGGTAAAA+TGG	0.254979	2:-10849736	MsaT006861.1:intron
GAAAGCTATCGGAAAGAAAT+TGG	0.264807	2:-10847152	MsaT006861.1:CDS
CATGAGTTCAGAGGAATTAA+AGG	0.265913	2:-10851521	MsaT006861.1:CDS
CGCTTCCGCTCCCTTCTTGT+TGG	0.266574	2:+10848357	None:intergenic
AATTAAAAGAGCGTGATTCT+AGG	0.282453	2:-10849689	MsaT006861.1:CDS
TGCAGTTGCCTCTTCTCCTT+TGG	0.299411	2:+10848766	None:intergenic
GCAGGTCATACCCTTTCTTC+AGG	0.300949	2:+10851398	None:intergenic
TTACTTCAAATGGTTAGATT+TGG	0.306067	2:-10848854	MsaT006861.1:CDS
CTAGGAATGCGGGGCTCCTT+TGG	0.306334	2:+10848191	None:intergenic
ACAAACTTGGCTATGGGAAC+TGG	0.316885	2:-10846942	MsaT006861.1:CDS
TTCTGTAAATTTCTTCATCT+TGG	0.320780	2:+10848733	None:intergenic
GAAAGATACAAGGAATTAAA+TGG	0.323297	2:-10847497	MsaT006861.1:intron
TTGCAAACTATATCTTTAAT+GGG	0.326223	2:-10851551	MsaT006861.1:CDS
CGGGGCTCCTTTGGTTTAGA+AGG	0.330172	2:+10848200	None:intergenic
AAATGGAATAAATGGAATTC+TGG	0.335855	2:-10851768	MsaT006861.1:CDS
AAGACAAATTTCTCACTTCC+CGG	0.336877	2:+10849422	None:intergenic
CTTGCCAAAGCCCGCTTTGT+CGG	0.344701	2:+10846643	None:intergenic
AACACACCTGTGAAAATATA+AGG	0.350522	2:+10849664	None:intergenic
TGATGCTTTGGTGATTCAAC+AGG	0.362638	2:-10849008	MsaT006861.1:CDS
AGATGATCTCCTGTTGTATA+AGG	0.362816	2:+10849850	None:intergenic
AGAGAGGACTTATTAGTTGC+TGG	0.363725	2:-10851281	MsaT006861.1:CDS
CCTTTACCTGATTCTTCTGA+TGG	0.365156	2:+10847912	None:intergenic
CTTTCTTCTGACCTATCCTA+TGG	0.366267	2:+10849191	None:intergenic
GAACCCACAAGTTGACTTGC+AGG	0.372363	2:-10849227	MsaT006861.1:CDS
TATCAATATTGTCGCATAGA+TGG	0.373339	2:-10849494	MsaT006861.1:CDS
GGTTAGATTTGGAGCTGAAA+TGG	0.375502	2:-10848843	MsaT006861.1:CDS
TATCACTGGTACACCGCTTC+AGG	0.378704	2:-10851090	MsaT006861.1:intron
ATTCAGAATAACAGAGGAAA+GGG	0.380450	2:-10853605	MsaT006861.1:intron
CACCCTTGTTTAGATTTGAT+TGG	0.381813	2:-10846891	MsaT006861.1:CDS
CGGTTTGTTGAAAGCATCAA+TGG	0.382460	2:+10849442	None:intergenic
AAAGCTTGCACTTGATGCTT+TGG	0.383951	2:-10849020	MsaT006861.1:CDS
AAATGTGATTTGCAGGGGCT+TGG	0.393528	2:-10851581	MsaT006861.1:intron
TTTGGGGCAACCACCATATG+AGG	0.393674	2:+10851497	None:intergenic
TAAAGATGAGTTACTTCAAA+TGG	0.398547	2:-10848864	MsaT006861.1:CDS
CGCTGAAGAGATGGAAGAAA+AGG	0.403156	2:-10847758	MsaT006861.1:CDS
GCAGTTGCATAGCTATATTC+AGG	0.403936	2:+10849923	None:intergenic
CTACTTTACGTCGATTTAGT+TGG	0.404886	2:-10851208	MsaT006861.1:CDS
TAGGGGAAGAGGAGAAAATA+AGG	0.407839	2:-10846459	None:intergenic
GACTCCGACAAAGCGGGCTT+TGG	0.410665	2:-10846647	MsaT006861.1:CDS
ACCTTCTTCCGACGAAGAAC+CGG	0.411184	2:-10854427	MsaT006861.1:CDS
CTAGAGTTGAAGGTACAGTA+TGG	0.414233	2:-10847109	MsaT006861.1:CDS
TTGAAGTCAGATGTTGAGAA+AGG	0.420649	2:-10850069	MsaT006861.1:CDS
CTCAGGGCCTGTGAGAAATA+TGG	0.422800	2:-10847602	MsaT006861.1:CDS
ATCAGTAATTGTACTATCCT+TGG	0.423897	2:+10848811	None:intergenic
CATTGATGCTTTCAACAAAC+CGG	0.425535	2:-10849441	MsaT006861.1:CDS
TCCTTGGCAACCCTGAAGAA+AGG	0.427180	2:-10851409	MsaT006861.1:CDS
CTCTGGTGAAAATGACCAAC+AGG	0.427212	2:-10850226	MsaT006861.1:CDS
ACTTACAACTGTGGCATCCT+AGG	0.427830	2:+10848173	None:intergenic
TCAGCACCTTGGAAAAGATA+TGG	0.429168	2:+10849883	None:intergenic
AGAATAATCTTCATGAACTT+TGG	0.429841	2:-10850317	MsaT006861.1:CDS
TTGGTCACCTTTCGCAAAAT+GGG	0.431230	2:+10853544	None:intergenic
CCTCATTCGGTTGGTAGAAA+AGG	0.433751	2:-10846821	MsaT006861.1:CDS
TGAAGAATGTGACCGATTCA+TGG	0.436345	2:-10847062	MsaT006861.1:intron
TTCTTCATCACAGGTATTCA+AGG	0.437398	2:-10851845	MsaT006861.1:intron
TTCAACCTTCGAAGAAGAAA+TGG	0.438151	2:+10850087	None:intergenic
TGGGAACTGGGATGAGTTGA+AGG	0.438529	2:-10846929	MsaT006861.1:CDS
TGTCGCATAGATGGCAATAC+TGG	0.439047	2:-10849485	MsaT006861.1:CDS
ACCGGTTCTTCGTCGGAAGA+AGG	0.441524	2:+10854426	None:intergenic
CTGCGTGCTGTAAAATTCCT+TGG	0.444257	2:-10851425	MsaT006861.1:CDS
GCAAACCCATCAGAAGAATC+AGG	0.444921	2:-10847918	MsaT006861.1:CDS
ACCAATTGGCTGGACTGAAC+TGG	0.445172	2:-10851808	MsaT006861.1:CDS
TCAACTCGAGCTGGAGGTCT+TGG	0.446039	2:-10849392	MsaT006861.1:CDS
TCCGGCCATTTCTTCTTCGA+AGG	0.446301	2:-10850092	MsaT006861.1:CDS
GATGAGTGGTTTCAAATCTC+TGG	0.446968	2:-10850243	MsaT006861.1:CDS
ACTCACCATGTCAGCTTCAA+TGG	0.448822	2:+10853710	None:intergenic
GAATCCTTGGCTAGAGTTGA+AGG	0.451268	2:-10847119	MsaT006861.1:CDS
CAAAGGAGCCCCGCATTCCT+AGG	0.452855	2:-10848190	MsaT006861.1:CDS
ATTGAGTGAGTTGTATGAAA+AGG	0.453109	2:-10848049	MsaT006861.1:CDS
ATATGCATGGTTCACAAACT+TGG	0.454812	2:-10846955	MsaT006861.1:CDS
GAGCCTGCAAGTCAACTTGT+GGG	0.454984	2:+10849224	None:intergenic
CCCTTTCTTCAGGGTTGCCA+AGG	0.460762	2:+10851408	None:intergenic
CTGTGGCATCCTAGGAATGC+GGG	0.461445	2:+10848181	None:intergenic
CAGGTCATACCCTTTCTTCA+GGG	0.465157	2:+10851399	None:intergenic
AGAAGAAGATCAAGAGGAGT+TGG	0.466856	2:-10854355	MsaT006861.1:CDS
ATCAAATTCCTACCATGAAT+CGG	0.468830	2:+10847050	None:intergenic
AGGAATTAAAGGCCCTCATA+TGG	0.468875	2:-10851510	MsaT006861.1:CDS
AATGAAGAAACAGAAAGTTC+AGG	0.471703	2:-10853757	MsaT006861.1:CDS
TGCTATTGTTGTAGGGGAAG+AGG	0.473051	2:-10846470	MsaT006861.1:intron
CCTGGTCCTCCTTATACAAC+AGG	0.473402	2:-10849859	MsaT006861.1:CDS
AAAAGAAACCATTCTTAAAG+TGG	0.474223	2:-10850034	MsaT006861.1:CDS
TGACATGCCCACTTTAAGAA+TGG	0.474633	2:+10850026	None:intergenic
GTCGGAAGAAGGTTGTTGCT+TGG	0.480197	2:+10854437	None:intergenic
TTTCTTCTGACCTATCCTAT+GGG	0.482269	2:+10849192	None:intergenic
GTTGCCCCAAAATCAACTCT+TGG	0.485660	2:-10851485	MsaT006861.1:CDS
CTTTACCTGATTCTTCTGAT+GGG	0.490682	2:+10847913	None:intergenic
GGTGATTCAACAGGGGCGAT+TGG	0.490770	2:-10848999	MsaT006861.1:CDS
GATCATCTCATTACCAGTGC+TGG	0.494768	2:-10849835	MsaT006861.1:intron
GCCAGTTCAGTCCAGCCAAT+TGG	0.495284	2:+10851807	None:intergenic
ATGGTTCACAAACTTGGCTA+TGG	0.495652	2:-10846949	MsaT006861.1:CDS
TGGACCGCTACAAGAATCCT+TGG	0.496208	2:-10847132	MsaT006861.1:CDS
GTTATGTGGCTTCAGGGAGA+AGG	0.498830	2:-10853831	MsaT006861.1:intron
TTCCGCTTCTTAGCAGAAGA+TGG	0.498955	2:+10846607	None:intergenic
TCATCTCAAAAGAAGTCAAA+AGG	0.500696	2:-10853521	MsaT006861.1:CDS
CAAACTTGGCTATGGGAACT+GGG	0.502338	2:-10846941	MsaT006861.1:CDS
CAACGAAGAAGAAGATCAAG+AGG	0.505297	2:-10854361	MsaT006861.1:CDS
TCAATTGACCGCTGAAGAGA+TGG	0.505378	2:-10847767	MsaT006861.1:CDS
TGAAGTCAGATGTTGAGAAA+GGG	0.506216	2:-10850068	MsaT006861.1:CDS
TACAGTATGGGCAAAACAAA+GGG	0.506250	2:-10847096	MsaT006861.1:CDS
GGAGGTGCGACACCCTCATT+CGG	0.507133	2:-10846834	MsaT006861.1:CDS
CGGTGTTTCAAACACTCGTC+TGG	0.508343	2:-10852247	MsaT006861.1:CDS
CTGCTGAAACCTTCGATGAG+TGG	0.509650	2:-10850257	MsaT006861.1:CDS
TTCTTGTTATCAACTCGAGC+TGG	0.511860	2:-10849401	MsaT006861.1:CDS
ATTAAAAGAGCGTGATTCTA+GGG	0.511880	2:-10849688	MsaT006861.1:CDS
CTTTGTATATCAAGGTCCTC+CGG	0.515296	2:-10850110	MsaT006861.1:intron
AGATGCAATCAAATTTAAGA+TGG	0.515699	2:-10848711	MsaT006861.1:CDS
AATTCTTCACCTCTTCTAGC+AGG	0.516580	2:+10847731	None:intergenic
ATGAGGGATTACCAATTGGC+TGG	0.518662	2:-10851818	MsaT006861.1:CDS
GAAGATGAGGGATTACCAAT+TGG	0.519640	2:-10851822	MsaT006861.1:CDS
TGAGCCTGCAAGTCAACTTG+TGG	0.520379	2:+10849223	None:intergenic
TGGAATTCTGGCCGATGAGA+TGG	0.520937	2:-10851756	MsaT006861.1:intron
GATCTTGAGGTTGTCAATGC+TGG	0.521672	2:-10849964	MsaT006861.1:CDS
CCTTGGCAACCCTGAAGAAA+GGG	0.525845	2:-10851408	MsaT006861.1:intron
TTGCTTGGACAGTTTCGCCA+TGG	0.530196	2:+10854452	None:intergenic
TATAAATTTGCAGATATGCA+TGG	0.530856	2:-10846968	MsaT006861.1:intron
GAAGCGGTGTACCAGTGATA+AGG	0.531507	2:+10851093	None:intergenic
CGCATAGATGGCAATACTGG+TGG	0.537769	2:-10849482	MsaT006861.1:CDS
GCATAGATGGCAATACTGGT+GGG	0.541957	2:-10849481	MsaT006861.1:CDS
ACAAAGTATTGCCTCTGAGA+TGG	0.542123	2:-10847567	MsaT006861.1:CDS
GATGAGATCATGAAAGCTAT+CGG	0.542975	2:-10847163	MsaT006861.1:CDS
AACTATCGCCTCCTTATCAC+TGG	0.544314	2:-10851104	MsaT006861.1:CDS
GAAGATTATTTGATGTTCCG+TGG	0.544585	2:-10849518	MsaT006861.1:CDS
TGAAATAAGCAAACATGAGA+AGG	0.544963	2:-10853802	MsaT006861.1:CDS
CCATCAGAAGAATCAGGTAA+AGG	0.546617	2:-10847912	MsaT006861.1:CDS
TCATACAACTCACTCAATCT+CGG	0.548650	2:+10848054	None:intergenic
TCATTCTGTATGATAGTGAC+TGG	0.551238	2:-10849343	MsaT006861.1:intron
TGAGCAGAACTTACCAGCAC+TGG	0.553084	2:+10849822	None:intergenic
AGAGTTCACCGGTTCTTCGT+CGG	0.554826	2:+10854419	None:intergenic
TGGTTCACAAACTTGGCTAT+GGG	0.556034	2:-10846948	MsaT006861.1:CDS
CAGGTATTCAAGGGAAGATG+AGG	0.556223	2:-10851835	MsaT006861.1:CDS
CCTGTTGTATAAGGAGGACC+AGG	0.557129	2:+10849859	None:intergenic
ACAATAAACCATACCTGAAG+CGG	0.557476	2:+10851077	None:intergenic
ATTTCGACCATATTTCTCAC+AGG	0.558574	2:+10847595	None:intergenic
CAAGATCGTGCCCATAGGAT+AGG	0.560836	2:-10849202	MsaT006861.1:CDS
TTATAAAGCATTACTGCAGA+AGG	0.565526	2:-10849986	MsaT006861.1:CDS
AAAGAAACCATTCTTAAAGT+GGG	0.566006	2:-10850033	MsaT006861.1:CDS
TTGTCAATGCTGGTGGAGAA+CGG	0.568224	2:-10849954	MsaT006861.1:CDS
AATTCAGAATAACAGAGGAA+AGG	0.573850	2:-10853606	MsaT006861.1:intron
GTCCATCTTCTGCTAAGAAG+CGG	0.577132	2:-10846609	MsaT006861.1:CDS
CCTTGCTCTCTAAAACAATG+AGG	0.577929	2:-10851139	MsaT006861.1:CDS
AATTATTGCCAAAGGAGAAG+AGG	0.577947	2:-10848774	MsaT006861.1:CDS
ACTGGGTTGAACCAACAAGA+AGG	0.579274	2:-10848368	MsaT006861.1:CDS
TTTCTCACAGGCCCTGAGGA+AGG	0.580770	2:+10847607	None:intergenic
GAACATGACTCCGACAAAGC+GGG	0.583769	2:-10846653	MsaT006861.1:CDS
TCCTCCGACGAAGAGTTCAC+CGG	0.584220	2:+10854408	None:intergenic
TGCGACAATATTGATATCCA+CGG	0.586376	2:+10849501	None:intergenic
TTGTTATCAACTCGAGCTGG+AGG	0.587419	2:-10849398	MsaT006861.1:CDS
CACAGATGATTATGCTAGCA+CGG	0.588441	2:-10846575	MsaT006861.1:intron
GGAAGTTGAAAGATATGCAA+AGG	0.589525	2:-10847528	MsaT006861.1:CDS
ATTGATAGAATTATTGCCAA+AGG	0.589651	2:-10848782	MsaT006861.1:CDS
TATGGTACAGTATACGATTG+AGG	0.589998	2:-10849068	MsaT006861.1:intron
GAAGATGAAGAGTACCTGAA+AGG	0.591611	2:-10852279	MsaT006861.1:CDS
TCTTCATCACAGGTATTCAA+GGG	0.594258	2:-10851844	MsaT006861.1:intron
TAGAGTTGAAGGTACAGTAT+GGG	0.594388	2:-10847108	MsaT006861.1:CDS
AAAGGAAGTACGCTATCTCA+TGG	0.596145	2:-10848031	MsaT006861.1:intron
AAAACCAAGAATACGATGAG+AGG	0.596156	2:-10846798	MsaT006861.1:CDS
AGGTGGTCCTTCTAAACCAA+AGG	0.599772	2:-10848207	MsaT006861.1:CDS
GATTTGAAACCACTCATCGA+AGG	0.601191	2:+10850248	None:intergenic
ATTACTGCAGAAGGATCTTG+AGG	0.601483	2:-10849977	MsaT006861.1:CDS
GTCAAAAGTGACTGAAGAAG+AGG	0.601809	2:-10852301	MsaT006861.1:CDS
GCACAACACAAGAACTTGCA+AGG	0.601843	2:-10846855	MsaT006861.1:CDS
AGAAGGACCACCTTGCCGCA+TGG	0.601932	2:+10848217	None:intergenic
CTCAAAAGAAGTCAAAAGGA+AGG	0.601978	2:-10853517	MsaT006861.1:intron
ACCTTCGAAGAAGAAATGGC+CGG	0.602746	2:+10850091	None:intergenic
AGTATTGCCTCTGAGATGGA+AGG	0.603669	2:-10847563	MsaT006861.1:CDS
CTTGAGGTTGTCAATGCTGG+TGG	0.606732	2:-10849961	MsaT006861.1:CDS
GAGGACCAGGTTCAGCACCT+TGG	0.606760	2:+10849872	None:intergenic
AGGCTCAAGATCGTGCCCAT+AGG	0.609115	2:-10849207	MsaT006861.1:CDS
ATTGATGCTTTCAACAAACC+GGG	0.609475	2:-10849440	MsaT006861.1:CDS
GTACAGTATGGGCAAAACAA+AGG	0.610911	2:-10847097	MsaT006861.1:CDS
TGATCTCCTGTTGTATAAGG+AGG	0.612764	2:+10849853	None:intergenic
AAACCAAGAATACGATGAGA+GGG	0.613365	2:-10846797	MsaT006861.1:CDS
AAAGGAGCGCCTGCTAGAAG+AGG	0.614957	2:-10847740	MsaT006861.1:intron
TTCAAGCAAACCATGCGGCA+AGG	0.616039	2:-10848227	MsaT006861.1:CDS
GTGCGACACCCTCATTCGGT+TGG	0.616347	2:-10846830	MsaT006861.1:CDS
CATAGATGGCAATACTGGTG+GGG	0.619803	2:-10849480	MsaT006861.1:CDS
GGATAGTACAATTACTGATG+AGG	0.622601	2:-10848807	MsaT006861.1:CDS
GATGCTTTGGTGATTCAACA+GGG	0.622713	2:-10849007	MsaT006861.1:CDS
AAACCAATCAAATCTAAACA+AGG	0.624018	2:+10846888	None:intergenic
ACCGGTGAACTCTTCGTCGG+AGG	0.624249	2:-10854409	MsaT006861.1:CDS
ATAAACAGAGAAACTAACCT+TGG	0.624998	2:+10846746	None:intergenic
TTGGGGCAACCACCATATGA+GGG	0.628718	2:+10851498	None:intergenic
TCAAACACATACCATCTCAT+CGG	0.629753	2:+10851745	None:intergenic
TGCGGCCATTGAAGCTGACA+TGG	0.630337	2:-10853715	MsaT006861.1:intron
GGCTACTTGCATGAGTTCAG+AGG	0.630500	2:-10851530	MsaT006861.1:CDS
TGTACCTTCAACTCTAGCCA+AGG	0.633332	2:+10847115	None:intergenic
CTGGGTTGAACCAACAAGAA+GGG	0.636149	2:-10848367	MsaT006861.1:CDS
GGTCTTCAAAGAAAGATACA+AGG	0.637240	2:-10847507	MsaT006861.1:CDS
TTGAACCAACAAGAAGGGAG+CGG	0.638721	2:-10848362	MsaT006861.1:CDS
CTAGCCAAGGATTCTTGTAG+CGG	0.640982	2:+10847128	None:intergenic
ACTGTGGCATCCTAGGAATG+CGG	0.643821	2:+10848180	None:intergenic
TGTGGCATCCTAGGAATGCG+GGG	0.645266	2:+10848182	None:intergenic
AATATAATTCAGAATAACAG+AGG	0.645673	2:-10853611	MsaT006861.1:intron
AATTAAAGGCCCTCATATGG+TGG	0.647561	2:-10851507	MsaT006861.1:CDS
ATAGATGTTGATGAACCAGA+AGG	0.648695	2:-10847884	MsaT006861.1:intron
GCGGTGTACCAGTGATAAGG+AGG	0.651703	2:+10851096	None:intergenic
ATTGCTGCACAACCTCCTGT+TGG	0.656715	2:+10850211	None:intergenic
CGTGCTAGCATAATCATCTG+TGG	0.659965	2:+10846576	None:intergenic
GGAGGCTAGAATTTCTCGGA+AGG	0.661654	2:-10847185	MsaT006861.1:CDS
AACCAATCAAATCTAAACAA+GGG	0.662144	2:+10846889	None:intergenic
GATATTAGATGCTCAAAATG+CGG	0.664032	2:-10853733	MsaT006861.1:CDS
CAAAGAGAAGAAACTTGCCA+AGG	0.664058	2:-10846763	MsaT006861.1:CDS
TTTGTTGAAAGCATCAATGG+AGG	0.666932	2:+10849445	None:intergenic
GGTTGTGCAGCAATTACACA+AGG	0.669375	2:-10850202	MsaT006861.1:intron
AGGTATTCAAGGGAAGATGA+GGG	0.669516	2:-10851834	MsaT006861.1:CDS
ATGCTTTGGTGATTCAACAG+GGG	0.674935	2:-10849006	MsaT006861.1:CDS
AGAACCGGTGAACTCTTCGT+CGG	0.680310	2:-10854412	MsaT006861.1:CDS
GTTGCATAGCTATATTCAGG+AGG	0.681563	2:+10849926	None:intergenic
TTCAGAATAACAGAGGAAAG+GGG	0.682557	2:-10853604	MsaT006861.1:intron
CATATTTCTCACAGGCCCTG+AGG	0.684289	2:+10847603	None:intergenic
AGAACATGACTCCGACAAAG+CGG	0.687228	2:-10846654	MsaT006861.1:CDS
TTCGAAGAAGAAATGGCCGG+AGG	0.691709	2:+10850094	None:intergenic
CAACACAAGAACTTGCAAGG+AGG	0.694877	2:-10846852	MsaT006861.1:CDS
TGGTGAAAATGACCAACAGG+AGG	0.699490	2:-10850223	MsaT006861.1:CDS
ACTGTAGAGACATATAAGAG+AGG	0.702563	2:-10851297	MsaT006861.1:intron
AAGCAAACCATGCGGCAAGG+TGG	0.705370	2:-10848224	MsaT006861.1:CDS
AGTGCATAAACTTACAACTG+TGG	0.709193	2:+10848164	None:intergenic
AGAATAACAGAGGAAAGGGG+CGG	0.710228	2:-10853601	MsaT006861.1:CDS
TACCTGAAAGGAGAAGAAGA+CGG	0.728348	2:-10852267	MsaT006861.1:CDS
AATACTTCAAGCAAACCATG+CGG	0.766173	2:-10848232	MsaT006861.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	10846461	10854472	10846461	ID=MsaG006861
Chr2	mRNA	10846461	10854472	10846461	ID=MsaT006861.1;Parent=MsaG006861
Chr2	exon	10846461	10846478	10846461	ID=MsaT006861.1.exon25;Parent=MsaT006861.1
Chr2	CDS	10846461	10846478	10846461	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10846576	10846690	10846576	ID=MsaT006861.1.exon24;Parent=MsaT006861.1
Chr2	CDS	10846576	10846690	10846576	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10846760	10846977	10846760	ID=MsaT006861.1.exon23;Parent=MsaT006861.1
Chr2	CDS	10846760	10846977	10846760	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10847063	10847241	10847063	ID=MsaT006861.1.exon22;Parent=MsaT006861.1
Chr2	CDS	10847063	10847241	10847063	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10847498	10847663	10847498	ID=MsaT006861.1.exon21;Parent=MsaT006861.1
Chr2	CDS	10847498	10847663	10847498	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10847741	10847799	10847741	ID=MsaT006861.1.exon20;Parent=MsaT006861.1
Chr2	CDS	10847741	10847799	10847741	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10847885	10847939	10847885	ID=MsaT006861.1.exon19;Parent=MsaT006861.1
Chr2	CDS	10847885	10847939	10847885	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10848032	10848101	10848032	ID=MsaT006861.1.exon18;Parent=MsaT006861.1
Chr2	CDS	10848032	10848101	10848032	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10848179	10848268	10848179	ID=MsaT006861.1.exon17;Parent=MsaT006861.1
Chr2	CDS	10848179	10848268	10848179	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10848354	10848430	10848354	ID=MsaT006861.1.exon16;Parent=MsaT006861.1
Chr2	CDS	10848354	10848430	10848354	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10848551	10848579	10848551	ID=MsaT006861.1.exon15;Parent=MsaT006861.1
Chr2	CDS	10848551	10848579	10848551	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10848705	10848893	10848705	ID=MsaT006861.1.exon14;Parent=MsaT006861.1
Chr2	CDS	10848705	10848893	10848705	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10848987	10849080	10848987	ID=MsaT006861.1.exon13;Parent=MsaT006861.1
Chr2	CDS	10848987	10849080	10848987	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10849162	10849249	10849162	ID=MsaT006861.1.exon12;Parent=MsaT006861.1
Chr2	CDS	10849162	10849249	10849162	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10849344	10849564	10849344	ID=MsaT006861.1.exon11;Parent=MsaT006861.1
Chr2	CDS	10849344	10849564	10849344	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10849671	10849744	10849671	ID=MsaT006861.1.exon10;Parent=MsaT006861.1
Chr2	CDS	10849671	10849744	10849671	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10849836	10850118	10849836	ID=MsaT006861.1.exon9;Parent=MsaT006861.1
Chr2	CDS	10849836	10850118	10849836	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10850203	10850337	10850203	ID=MsaT006861.1.exon8;Parent=MsaT006861.1
Chr2	CDS	10850203	10850337	10850203	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10851091	10851312	10851091	ID=MsaT006861.1.exon7;Parent=MsaT006861.1
Chr2	CDS	10851091	10851312	10851091	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10851409	10851588	10851409	ID=MsaT006861.1.exon6;Parent=MsaT006861.1
Chr2	CDS	10851409	10851588	10851409	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10851757	10851854	10851757	ID=MsaT006861.1.exon5;Parent=MsaT006861.1
Chr2	CDS	10851757	10851854	10851757	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10852232	10852335	10852232	ID=MsaT006861.1.exon4;Parent=MsaT006861.1
Chr2	CDS	10852232	10852335	10852232	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10853518	10853621	10853518	ID=MsaT006861.1.exon3;Parent=MsaT006861.1
Chr2	CDS	10853518	10853621	10853518	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10853716	10853838	10853716	ID=MsaT006861.1.exon2;Parent=MsaT006861.1
Chr2	CDS	10853716	10853838	10853716	ID=cds.MsaT006861.1;Parent=MsaT006861.1
Chr2	exon	10854338	10854472	10854338	ID=MsaT006861.1.exon1;Parent=MsaT006861.1
Chr2	CDS	10854338	10854472	10854338	ID=cds.MsaT006861.1;Parent=MsaT006861.1

Gene Sequence

>MsaT006861.1

ATGGCGAAACTGTCCAAGCAACAACCTTCTTCCGACGAAGAACCGGTGAACTCTTCGTCGGAGGAAGAAGAGCAAGTTAATGAGCAGATCAACGAAGAAGAAGATCAAGAGGAGTTGGAAGCTGTTGCTCGTGCTGGAGAAGGTGCTCCTGAAATAAGCAAACATGAGAAGGCGAGATTGCGAGAAATGCAAAAAATGAAGAAACAGAAAGTTCAGGAGATATTAGATGCTCAAAATGCGGCCATTGAAGCTGACATGAATAACAGAGGAAAGGGGCGGTTGAAGTATCTCTTACAGCAGACTGAGCTGTTTGCCCATTTTGCGAAAGGTGACCAATCATCTCAAAAGAAGTCAAAAGGAAGTGGTCGCCATGCGTCAAAAGTGACTGAAGAAGAGGAAGATGAAGAGTACCTGAAAGGAGAAGAAGACGGTGTTTCAAACACTCGTCTGGTGACACAGCCATCATGTATTCAAGGGAAGATGAGGGATTACCAATTGGCTGGACTGAACTGGCTCATTCGATTGTATGAAAATGGAATAAATGGAATTCTGGCCGATGAGATGGGGCTTGGTAAAACATTGCAAACTATATCTTTAATGGGCTACTTGCATGAGTTCAGAGGAATTAAAGGCCCTCATATGGTGGTTGCCCCAAAATCAACTCTTGGAAATTGGATGAATGAGATTCGTCGCTTTTGTCCTATTCTGCGTGCTGTAAAATTCCTTGGCAACCCTGAAGAAAGGAGACATATAAGAGAGGACTTATTAGTTGCTGGAAAGTTTGACGTTTGTGTTACAAGTTTTGAAATGGCTATCAAGGAGAAGTCTACTTTACGTCGATTTAGTTGGCGCTACATAATTATCGATGAAGCTCATAGAATCAAGAACGAGAATTCCTTGCTCTCTAAAACAATGAGGATTTACAATACAAACTATCGCCTCCTTATCACTGGTACACCGCTTCAGAATAATCTTCATGAACTTTGGTCTCTTCTCAACTTTCTTCTGCCTGAAATTTTTAGTTCTGCTGAAACCTTCGATGAGTGGTTTCAAATCTCTGGTGAAAATGACCAACAGGAGGTTGTGCAGCAATTACACAAGGTCCTCCGGCCATTTCTTCTTCGAAGGTTGAAGTCAGATGTTGAGAAAGGGTTGCCACCGAAAAAAGAAACCATTCTTAAAGTGGGCATGTCACAATTGCAGAAACAATATTATAAAGCATTACTGCAGAAGGATCTTGAGGTTGTCAATGCTGGTGGAGAACGGAAGCGCCTCCTGAATATAGCTATGCAACTGCGCAAATGTTGTAATCATCCATATCTTTTCCAAGGTGCTGAACCTGGTCCTCCTTATACAACAGGAGATCATCTCATTACCAGTGCTGGTAAAATGGTTCTTTTGGATAAGTTGCTTCCTAAATTAAAAGAGCGTGATTCTAGGGTCCTTATATTTTCACAGATGACTAGGCTGCTAGACATACTTGAAGATTATTTGATGTTCCGTGGATATCAATATTGTCGCATAGATGGCAATACTGGTGGGGATGATCGTGATGCCTCCATTGATGCTTTCAACAAACCGGGAAGTGAGAAATTTGTCTTCTTGTTATCAACTCGAGCTGGAGGTCTTGGTATTAATCTTGCTACTGCTGACGTCGTCATTCTGTATGATAGTGACTGGAACCCACAAGTTGACTTGCAGGCTCAAGATCGTGCCCATAGGATAGGTCAGAAGAAAGAAGTTCAAGTTTTCCGTTTTTGCACCGAGTATACGATTGAGGAGAAAGTCATTGAAAGAGCTTACAAAAAGCTTGCACTTGATGCTTTGGTGATTCAACAGGGGCGATTGGCTGAGCAGAAGACGGTAAATAAAGATGAGTTACTTCAAATGGTTAGATTTGGAGCTGAAATGGTTTTCAGTTCCAAGGATAGTACAATTACTGATGAGGATATTGATAGAATTATTGCCAAAGGAGAAGAGGCAACTGCAGAGCTTGATGCCAAGATGAAGAAATTTACAGAAGATGCAATCAAATTTAAGATGGATGACACTGCTGAGTTATACGATTTTGATGATAAGGATGAGAACAAGTTTGATTTCAAAAAAATTGTGAGTGAAAACTGGGTTGAACCAACAAGAAGGGAGCGGAAGCGCAATTACTCGGAGTCTGAATACTTCAAGCAAACCATGCGGCAAGGTGGTCCTTCTAAACCAAAGGAGCCCCGCATTCCTAGGATGCCACAGTTGCATGATTTCCAGTTTTTCAACACACCGAGATTGAGTGAGTTGTATGAAAAGGAAGTACGCTATCTCATGCAAACCCATCAGAAGAATCAGGTAAAGGACTCGATAGATGTTGATGAACCAGAAGAGGTAGGAGATCAATTGACCGCTGAAGAGATGGAAGAAAAGGAGCGCCTGCTAGAAGAGGGATTTTCATCATGGAGCCGAAAAGATTTTAACACCTTCCTCAGGGCCTGTGAGAAATATGGTCGAAATGATATACAAAGTATTGCCTCTGAGATGGAAGGAAAAACTGAGGAGGAAGTTGAAAGATATGCAAAGGTCTTCAAAGAAAGATACAAGGAATTAAATGATTATGATAGAATTATCAAAAACATCGAGAGGGGGGAGGCTAGAATTTCTCGGAAGGATGAGATCATGAAAGCTATCGGAAAGAAATTGGACCGCTACAAGAATCCTTGGCTAGAGTTGAAGGTACAGTATGGGCAAAACAAAGGGAAGCTATACAATGAAGAATGTGACCGATTCATGATATGCATGGTTCACAAACTTGGCTATGGGAACTGGGATGAGTTGAAGGCAGCGTTTCGAACATCACCCTTGTTTAGATTTGATTGGTTTGTCAAGTCTCGCACAACACAAGAACTTGCAAGGAGGTGCGACACCCTCATTCGGTTGGTAGAAAAGGAAAACCAAGAATACGATGAGAGGGAGAGACAAGCTCAAAGAGAAGAAACTTGCCAAGGTTATTTTACAATATTTCAGAACATGACTCCGACAAAGCGGGCTTTGGCAAGACAAACTGAGAGTCCATCTTCTGCTAAGAAGCGGAAGCAGTCAACCACAGATGATTATGCTAGCACGGGGAAGAGGAGAAAATAA

Protein sequence

>MsaT006861.1

MAKLSKQQPSSDEEPVNSSSEEEEQVNEQINEEEDQEELEAVARAGEGAPEISKHEKARLREMQKMKKQKVQEILDAQNAAIEADMNNRGKGRLKYLLQQTELFAHFAKGDQSSQKKSKGSGRHASKVTEEEEDEEYLKGEEDGVSNTRLVTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLHEFRGIKGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPEERRHIREDLLVAGKFDVCVTSFEMAIKEKSTLRRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQLQKQYYKALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITSAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYQYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTAELYDFDDKDENKFDFKKIVSENWVEPTRRERKRNYSESEYFKQTMRQGGPSKPKEPRIPRMPQLHDFQFFNTPRLSELYEKEVRYLMQTHQKNQVKDSIDVDEPEEVGDQLTAEEMEEKERLLEEGFSSWSRKDFNTFLRACEKYGRNDIQSIASEMEGKTEEEVERYAKVFKERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKVQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDERERQAQREETCQGYFTIFQNMTPTKRALARQTESPSSAKKRKQSTTDDYASTGKRRK*