AlfalfaGEDB | MsaG007030

M. sativa ssp. caerulea / MsaG007030

KEGG: K07198 K16312 K19852
GO: -
PFAM: PF03101.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007030	XP_024636348.1	67.788	208	14	1	148	302	436	643	1.57e-76	259
MsaG007030	XP_024636348.1	97.260	146	4	0	1	146	1	146	3.44e-93	303

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007030	sp\|Q9SZL8\|FRS5_ARATH	42.529	87	46	2	62	144	117	203	4.70e-13	73.2

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007030	tr\|A0A396GJD5\|A0A396GJD5_MEDTR	70.526	95	28	0	148	242	436	530	1.70e-34	143
MsaG007030	tr\|A0A396GJD5\|A0A396GJD5_MEDTR	76.712	146	34	0	1	146	1	146	1.73e-71	243

TFs/TRs:

Gene ID	Type	Classification
MsaG007030	TF	FAR1

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000181	MsaG007030	0.810149	2.275510e-50	3.899973e-48
MsaG000187	MsaG007030	0.807783	7.260172e-50	1.175370e-47
MsaG000344	MsaG007030	0.828560	1.503626e-54	4.177094e-52
MsaG000408	MsaG007030	0.810795	1.652657e-50	2.877527e-48
MsaG000648	MsaG007030	0.831524	2.869414e-55	8.676604e-53
MsaG000706	MsaG007030	0.858746	1.303849e-62	9.667361e-60
MsaG000796	MsaG007030	0.831494	2.918557e-55	8.817420e-53
MsaG000968	MsaG007030	0.871168	1.712964e-66	2.085677e-63
MsaG001037	MsaG007030	0.851982	1.191016e-60	6.915191e-58
MsaG001038	MsaG007030	0.802033	1.140955e-48	1.615231e-46
MsaG001055	MsaG007030	0.814646	2.395061e-51	4.588581e-49
MsaG001713	MsaG007030	0.821262	7.789286e-53	1.771353e-50
MsaG001909	MsaG007030	0.830170	6.139058e-55	1.785358e-52
MsaG002062	MsaG007030	0.827712	2.402259e-54	6.516390e-52
MsaG002146	MsaG007030	0.806081	1.657018e-49	2.576372e-47
MsaG002473	MsaG007030	0.835089	3.744787e-56	1.257723e-53
MsaG002496	MsaG007030	0.824609	1.303630e-53	3.244350e-51
MsaG002646	MsaG007030	0.801800	1.272744e-48	1.792362e-46
MsaG002885	MsaG007030	0.800253	2.626777e-48	3.571897e-46
MsaG003373	MsaG007030	0.805929	1.782964e-49	2.762259e-47
MsaG003662	MsaG007030	0.801889	1.220481e-48	1.722281e-46
MsaG003688	MsaG007030	0.840318	1.728201e-57	6.814298e-55
MsaG003730	MsaG007030	0.818680	3.015758e-52	6.406232e-50
MsaG004003	MsaG007030	0.800328	2.536623e-48	3.455170e-46
MsaG003891	MsaG007030	0.802220	1.044300e-48	1.484755e-46
MsaG003908	MsaG007030	0.803650	5.305877e-49	7.796151e-47
MsaG003914	MsaG007030	0.826571	4.490913e-54	1.179954e-51
MsaG004029	MsaG007030	0.819291	2.193049e-52	4.734164e-50
MsaG004476	MsaG007030	0.840693	1.380246e-57	5.506640e-55
MsaG004652	MsaG007030	0.802062	1.125345e-48	1.594206e-46
MsaG004654	MsaG007030	0.838135	6.326127e-57	2.329813e-54
MsaG004718	MsaG007030	0.806248	1.528138e-49	2.385553e-47
MsaG004794	MsaG007030	0.801531	1.444742e-48	2.022106e-46
MsaG004887	MsaG007030	0.816093	1.145745e-51	2.276994e-49
MsaG004987	MsaG007030	0.804597	3.377555e-49	5.072843e-47
MsaG005078	MsaG007030	0.823304	2.628839e-53	6.314666e-51
MsaG005420	MsaG007030	0.832601	1.559178e-55	4.864708e-53
MsaG005728	MsaG007030	0.820077	1.453241e-52	3.202850e-50
MsaG005843	MsaG007030	0.813439	4.408916e-51	8.195131e-49
MsaG005739	MsaG007030	0.800985	1.865854e-48	2.579469e-46
MsaG006143	MsaG007030	0.812346	7.633396e-51	1.380699e-48
MsaG006085	MsaG007030	0.813055	5.348327e-51	9.846405e-49
MsaG006240	MsaG007030	0.804191	4.101303e-49	6.102305e-47
MsaG006760	MsaG007030	0.831111	3.621250e-55	1.081900e-52
MsaG006840	MsaG007030	0.809210	3.613007e-50	6.053215e-48
MsaG006959	MsaG007030	0.810245	2.169617e-50	3.727302e-48
MsaG006940	MsaG007030	0.813657	3.950478e-51	7.383071e-49
MsaG007030	MsaG007279	0.834358	5.706978e-56	1.875400e-53
MsaG007030	MsaG007403	0.852168	1.055677e-60	6.168472e-58
MsaG007030	MsaG007584	0.816896	7.587134e-52	1.539212e-49
MsaG007030	MsaG007841	0.810548	1.867504e-50	3.232116e-48
MsaG007030	MsaG007949	0.839555	2.726371e-57	1.049514e-54
MsaG007030	MsaG007966	0.831070	3.706198e-55	1.105962e-52
MsaG007030	MsaG008003	0.814374	2.749011e-51	5.231081e-49
MsaG007030	MsaG008155	0.825506	8.020189e-54	2.045814e-51
MsaG007030	MsaG008412	0.837792	7.740466e-57	2.820840e-54
MsaG007030	MsaG008606	0.839103	3.566656e-57	1.353776e-54
MsaG007030	MsaG009117	0.833441	9.658414e-56	3.088772e-53
MsaG007030	MsaG009738	0.832163	1.998555e-55	6.157153e-53
MsaG007030	MsaG010265	0.814425	2.678631e-51	5.103722e-49
MsaG007030	MsaG010497	0.811469	1.182512e-50	2.093205e-48
MsaG007030	MsaG010637	0.860889	2.969147e-63	2.387989e-60
MsaG007030	MsaG010644	0.843666	2.273871e-58	9.975013e-56
MsaG007030	MsaG010651	0.841299	9.584518e-58	3.897869e-55
MsaG007030	MsaG010831	0.819514	1.952151e-52	4.238604e-50
MsaG007030	MsaG010890	0.823046	3.017252e-53	7.197347e-51
MsaG007030	MsaG010993	0.816479	9.400762e-52	1.886742e-49
MsaG007030	MsaG011035	0.817358	5.979093e-52	1.227531e-49
MsaG007030	MsaG011239	0.803529	5.619330e-49	8.233747e-47
MsaG007030	MsaG011508	0.807668	7.677850e-50	1.239530e-47
MsaG007030	MsaG011481	0.805274	2.442569e-49	3.726669e-47
MsaG007030	MsaG011823	0.803004	7.211052e-49	1.043849e-46
MsaG007030	MsaG011911	0.827627	2.516385e-54	6.809841e-52
MsaG007030	MsaG011972	0.854829	1.832106e-61	1.176358e-58
MsaG007030	MsaG012017	0.803250	6.417546e-49	9.342620e-47
MsaG007030	MsaG012046	0.824332	1.513838e-53	3.739370e-51
MsaG007030	MsaG012081	0.829335	9.781145e-55	2.777218e-52
MsaG007030	MsaG012171	0.803289	6.299044e-49	9.178488e-47
MsaG007030	MsaG012208	0.824566	1.334464e-53	3.317243e-51
MsaG007030	MsaG012237	0.832798	1.393603e-55	4.373292e-53
MsaG007030	MsaG012497	0.813183	5.014586e-51	9.261418e-49
MsaG007030	MsaG012498	0.818345	3.588424e-52	7.556803e-50
MsaG007030	MsaG012529	0.835164	3.586955e-56	1.207387e-53
MsaG007030	MsaG012639	0.835322	3.272553e-56	1.106804e-53
MsaG007030	MsaG012814	0.842812	3.830605e-58	1.634937e-55
MsaG007030	MsaG013974	0.838955	3.894345e-57	1.471387e-54
MsaG007030	MsaG014465	0.844230	1.607583e-58	7.182419e-56
MsaG007030	MsaG015331	0.800199	2.694096e-48	3.658865e-46
MsaG007030	MsaG016329	0.823057	3.000961e-53	7.160542e-51
MsaG007030	MsaG016433	0.825220	9.369921e-54	2.371259e-51
MsaG007030	MsaG016511	0.825638	7.468945e-54	1.912072e-51
MsaG007030	MsaG016529	0.803747	5.066382e-49	7.461201e-47
MsaG007030	MsaG016664	0.832767	1.418649e-55	4.447851e-53
MsaG007030	MsaG016816	0.825102	9.988217e-54	2.519567e-51
MsaG007030	MsaG017003	0.809944	2.517086e-50	4.292636e-48
MsaG007030	MsaG017023	0.840077	1.996038e-57	7.810940e-55
MsaG007030	MsaG017119	0.834560	5.081558e-56	1.679888e-53
MsaG007030	MsaG017187	0.836216	1.947346e-56	6.765427e-54
MsaG007030	MsaG017271	0.819610	1.856414e-52	4.040766e-50
MsaG007030	MsaG017290	0.837285	1.042752e-56	3.741425e-54
MsaG007030	MsaG017463	0.810749	1.690999e-50	2.940923e-48
MsaG007030	MsaG017504	0.801358	1.566550e-48	2.184042e-46
MsaG007030	MsaG017517	0.813457	4.369933e-51	8.126225e-49
MsaG007030	MsaG017529	0.826160	5.620997e-54	1.460122e-51
MsaG007030	MsaG017551	0.806891	1.119749e-49	1.774657e-47
MsaG007030	MsaG017837	0.828658	1.424557e-54	3.968198e-52
MsaG007030	MsaG017796	0.818042	4.198773e-52	8.773389e-50
MsaG007030	MsaG017839	0.808083	6.274214e-50	1.023084e-47
MsaG007030	MsaG017846	0.804445	3.632610e-49	5.436763e-47
MsaG007030	MsaG017907	0.810162	2.260073e-50	3.874821e-48
MsaG007030	MsaG018082	0.847981	1.549896e-59	7.844382e-57
MsaG007030	MsaG018396	0.802509	9.112581e-49	1.304230e-46
MsaG007030	MsaG018598	0.801430	1.514595e-48	2.115070e-46
MsaG007030	MsaG018861	0.803422	5.912880e-49	8.642230e-47
MsaG007030	MsaG018897	0.824219	1.608886e-53	3.961682e-51
MsaG007030	MsaG018998	0.801091	1.776033e-48	2.461096e-46
MsaG007030	MsaG019118	0.860842	3.068462e-63	2.463559e-60
MsaG007030	MsaG019122	0.855820	9.456703e-62	6.293252e-59
MsaG007030	MsaG019188	0.853662	3.966327e-61	2.442747e-58
MsaG007030	MsaG019806	0.851326	1.823326e-60	1.034472e-57
MsaG007030	MsaG020149	0.823286	2.654276e-53	6.372901e-51
MsaG007030	MsaG020418	0.821985	5.310957e-53	1.231163e-50
MsaG007030	MsaG020509	0.816312	1.023779e-51	2.046100e-49
MsaG007030	MsaG020732	0.836362	1.788927e-56	6.242530e-54
MsaG007030	MsaG020716	0.830858	4.174450e-55	1.238168e-52
MsaG007030	MsaG020750	0.822253	4.606877e-53	1.075621e-50
MsaG007030	MsaG022007	0.847096	2.707217e-59	1.329934e-56
MsaG007030	MsaG022362	0.815968	1.220996e-51	2.418961e-49
MsaG007030	MsaG022555	0.800825	2.011643e-48	2.770970e-46
MsaG007030	MsaG022868	0.821434	7.110381e-53	1.624276e-50
MsaG007030	MsaG023202	0.830491	5.128364e-55	1.505062e-52
MsaG007030	MsaG023268	0.812668	6.496179e-51	1.184413e-48
MsaG007030	MsaG023567	0.806899	1.115363e-49	1.768039e-47
MsaG007030	MsaG023502	0.806962	1.082054e-49	1.717769e-47
MsaG007030	MsaG023606	0.809979	2.473833e-50	4.222423e-48
MsaG007030	MsaG023663	0.801138	1.737387e-48	2.410138e-46
MsaG007030	MsaG023641	0.835595	2.794677e-56	9.529325e-54
MsaG007030	MsaG023689	0.802252	1.028997e-48	1.464040e-46
MsaG007030	MsaG023692	0.812414	7.375374e-51	1.336284e-48
MsaG007030	MsaG023893	0.855975	8.526663e-62	5.706313e-59
MsaG007030	MsaG023950	0.862919	7.144228e-64	6.215651e-61
MsaG007030	MsaG024120	0.824146	1.672626e-53	4.110566e-51
MsaG007030	MsaG024139	0.807004	1.060219e-49	1.684792e-47
MsaG007030	MsaG024329	0.803329	6.181763e-49	9.015764e-47
MsaG007030	MsaG024615	0.801918	1.204440e-48	1.700696e-46
MsaG007030	MsaG025882	0.805962	1.754844e-49	2.720778e-47
MsaG007030	MsaG027248	0.829756	7.736367e-55	2.223354e-52
MsaG007030	MsaG027546	0.834059	6.776342e-56	2.206811e-53
MsaG007030	MsaG027557	0.821997	5.276748e-53	1.223620e-50
MsaG007030	MsaG027567	0.818474	3.356711e-52	7.092388e-50
MsaG007030	MsaG027725	0.823377	2.527594e-53	6.083712e-51
MsaG007030	MsaG027845	0.811266	1.307679e-50	2.303316e-48
MsaG007030	MsaG028107	0.828153	1.883128e-54	5.171897e-52
MsaG007030	MsaG028192	0.826871	3.810433e-54	1.009586e-51
MsaG007030	MsaG028515	0.810231	2.184737e-50	3.751957e-48
MsaG007030	MsaG028620	0.861511	1.924270e-63	1.584688e-60
MsaG007030	MsaG028649	0.815126	1.876760e-51	3.639314e-49
MsaG007030	MsaG028754	0.837870	7.393376e-57	2.700709e-54
MsaG007030	MsaG028802	0.878251	6.848139e-69	1.140264e-65
MsaG007030	MsaG029063	0.814065	3.214616e-51	6.069677e-49
MsaG007030	MsaG029147	0.824853	1.142693e-53	2.862920e-51
MsaG007030	MsaG029357	0.833543	9.108022e-56	2.921457e-53
MsaG007030	MsaG029495	0.808513	5.084980e-50	8.377811e-48
MsaG007030	MsaG029580	0.866614	5.035816e-65	5.077220e-62
MsaG007030	MsaG030196	0.855725	1.007633e-61	6.682285e-59
MsaG007030	MsaG030595	0.809671	2.880205e-50	4.879624e-48
MsaG007030	MsaG031007	0.804121	4.240373e-49	6.299043e-47
MsaG007030	MsaG031494	0.810207	2.210347e-50	3.793708e-48
MsaG007030	MsaG031781	0.855456	1.206163e-61	7.922233e-59
MsaG007030	MsaG034023	0.823193	2.789524e-53	6.680548e-51
MsaG007030	MsaG034690	0.822410	4.235959e-53	9.932384e-51
MsaG007030	MsaG034778	0.805116	2.634350e-49	4.004655e-47
MsaG007030	MsaG034793	0.839124	3.523406e-57	1.338203e-54
MsaG007030	MsaG034954	0.802359	9.782965e-49	1.395385e-46
MsaG007030	MsaG035835	0.827556	2.617722e-54	7.069976e-52
MsaG007030	MsaG036061	0.806131	1.616814e-49	2.516919e-47
MsaG007030	MsaG036173	0.819879	1.612628e-52	3.535274e-50
MsaG007030	MsaG036468	0.805728	1.963970e-49	3.028377e-47
MsaG007030	MsaG036935	0.829722	7.883859e-55	2.263580e-52
MsaG007030	MsaG038682	0.814343	2.792941e-51	5.310505e-49
MsaG007030	MsaG038911	0.801466	1.489551e-48	2.081756e-46
MsaG007030	MsaG039682	0.801568	1.419986e-48	1.989120e-46
MsaG007030	MsaG039901	0.803085	6.940218e-49	1.006522e-46
MsaG007030	MsaG040027	0.831203	3.437280e-55	1.029636e-52
MsaG007030	MsaG040028	0.810142	2.283421e-50	3.912841e-48
MsaG007030	MsaG040380	0.804664	3.272426e-49	4.922499e-47
MsaG007030	MsaG040573	0.801576	1.414451e-48	1.981728e-46
MsaG007030	MsaG041072	0.820079	1.451665e-52	3.199560e-50
MsaG007030	MsaG041183	0.808287	5.678518e-50	9.305086e-48
MsaG007030	MsaG041299	0.829248	1.026902e-54	2.908317e-52
MsaG007030	MsaG041453	0.804584	3.399549e-49	5.104328e-47
MsaG007030	MsaG041985	0.835815	2.458982e-56	8.440164e-54
MsaG007030	MsaG042070	0.821218	7.969871e-53	1.810322e-50
MsaG007030	MsaG043695	0.867082	3.578778e-65	3.677525e-62
MsaG007030	MsaG044049	0.801624	1.382553e-48	1.939197e-46
MsaG007030	MsaG044499	0.804559	3.440515e-49	5.162935e-47
MsaG007030	MsaG044576	0.805520	2.170859e-49	3.331032e-47
MsaG007030	MsaG044796	0.821332	7.504184e-53	1.709657e-50
MsaG007030	MsaG044940	0.807330	9.048961e-50	1.449135e-47
MsaG007030	MsaG045535	0.800657	2.175404e-48	2.985361e-46
MsaG007030	MsaG045505	0.818393	3.499975e-52	7.379858e-50
MsaG007030	MsaG045510	0.857049	4.136784e-62	2.879377e-59
MsaG007030	MsaG045518	0.812993	5.518444e-51	1.014354e-48
MsaG007030	MsaG045630	0.809365	3.348646e-50	5.631300e-48
MsaG007030	MsaG045632	0.817403	5.842740e-52	1.200927e-49
MsaG007030	MsaG045811	0.812177	8.303716e-51	1.495645e-48
MsaG007030	MsaG045822	0.825008	1.051007e-53	2.644349e-51
MsaG007030	MsaG046018	0.828808	1.310710e-54	3.666506e-52
MsaG007030	MsaG046261	0.801635	1.375927e-48	1.930360e-46
MsaG007030	MsaG046352	0.831137	3.567914e-55	1.066785e-52
MsaG007030	MsaG046771	0.860265	4.579975e-63	3.597785e-60
MsaG007030	MsaG046782	0.809769	2.744813e-50	4.661270e-48
MsaG007030	MsaG046865	0.808391	5.397574e-50	8.866616e-48
MsaG007030	MsaG046872	0.812934	5.683654e-51	1.043187e-48
MsaG007030	MsaG046981	0.802408	9.557422e-49	1.364756e-46
MsaG007030	MsaG047139	0.820639	1.081834e-52	2.419864e-50
MsaG007030	MsaG002430	0.856926	4.494280e-62	3.114300e-59
MsaG007030	MsaG002578	0.820674	1.062007e-52	2.377642e-50
MsaG007030	MsaG009468	0.841889	6.709497e-58	2.780514e-55
MsaG007030	MsaG008963	0.813084	5.269922e-51	9.709020e-49
MsaG007030	MsaG008811	0.832466	1.683265e-55	5.231441e-53
MsaG007030	MsaG007367	0.812401	7.425009e-51	1.344860e-48
MsaG007030	MsaG008743	0.805152	2.590335e-49	3.940992e-47
MsaG007030	MsaG009124	0.833192	1.113251e-55	3.534349e-53
MsaG007030	MsaG007870	0.805110	2.642805e-49	4.016841e-47
MsaG007030	MsaG014406	0.817493	5.579184e-52	1.149400e-49
MsaG007030	MsaG011821	0.841477	8.610860e-58	3.521647e-55
MsaG007030	MsaG018216	0.845374	7.930844e-59	3.679229e-56
MsaG007030	MsaG019322	0.802414	9.530405e-49	1.361076e-46
MsaG007030	MsaG019915	0.813333	4.649943e-51	8.620051e-49
MsaG007030	MsaG029905	0.802321	9.957454e-49	1.419065e-46
MsaG007030	MsaG027436	0.802050	1.131843e-48	1.602959e-46
MsaG007030	MsaG027840	0.870963	2.001053e-66	2.415517e-63
MsaG007030	MsaG033973	0.812256	7.983240e-51	1.440713e-48
MsaG007030	MsaG031223	0.811657	1.076774e-50	1.914802e-48
MsaG007030	MsaG032757	0.807679	7.638931e-50	1.233546e-47
MsaG007030	MsaG032991	0.861929	1.435911e-63	1.201811e-60
MsaG007030	MsaG032354	0.818189	3.890257e-52	8.159696e-50
MsaG007030	MsaG029996	0.801303	1.608128e-48	2.239161e-46
MsaG007030	MsaG032445	0.832714	1.462093e-55	4.577042e-53
MsaG007030	MsaG033167	0.803978	4.538976e-49	6.720261e-47
MsaG007030	MsaG031607	0.800090	2.834646e-48	3.840374e-46
MsaG007030	MsaG037527	0.806632	1.269773e-49	2.000248e-47
MsaG007030	MsaG038283	0.820607	1.100174e-52	2.458806e-50
MsaG007030	MsaG036408	0.860649	3.509053e-63	2.797098e-60
MsaG007030	MsaG042683	0.815579	1.490094e-51	2.922955e-49
MsaG007030	MsaG040992	0.806036	1.693275e-49	2.629951e-47
MsaG007030	MsaG043306	0.873864	2.178232e-67	2.980513e-64

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007030	MtrunA17_Chr8g0363841	76.712	146	34	0	1	146	1	146	3.34e-75	243
MsaG007030	MtrunA17_Chr8g0363841	43.750	208	64	3	148	302	436	643	1.68e-43	158
MsaG007030	MtrunA17_Chr2g0329361	28.025	157	89	6	18	154	62	214	2.44e-12	65.9
MsaG007030	MtrunA17_Chr7g0258861	34.677	124	71	4	19	137	12	130	1.47e-11	64.3
MsaG007030	MtrunA17_Chr5g0448761	39.773	88	48	3	62	144	104	191	2.65e-11	64.3
MsaG007030	MtrunA17_Chr4g0033611	27.815	151	105	3	14	162	73	221	3.84e-11	62.4
MsaG007030	MtrunA17_Chr5g0440451	29.365	126	76	2	18	143	44	156	5.07e-11	63.5
MsaG007030	MtrunA17_Chr2g0329421	28.972	107	75	1	18	124	28	133	6.49e-11	61.2
MsaG007030	MtrunA17_Chr2g0287061	33.036	112	62	2	7	118	173	271	7.98e-11	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007030	AT4G38180.1	42.529	87	46	2	62	144	117	203	4.78e-14	73.2
MsaG007030	AT3G59470.3	32.039	103	69	1	18	120	71	172	4.05e-11	62.8
MsaG007030	AT3G59470.1	32.039	103	69	1	18	120	71	172	4.05e-11	62.8
MsaG007030	AT3G59470.2	32.039	103	69	1	18	120	83	184	4.52e-11	62.8

Find 52 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGCAGGAATCTTGTAATTT+TGG	0.216335	2:+12893447	MsaT007030.1:intron
ATTATTCTTAAACCCTTCTT+TGG	0.257903	2:-12891058	None:intergenic
TTTGGACTCATCCACTTCTA+TGG	0.267599	2:+12892435	MsaT007030.1:CDS
GTCTTTATACAATTTAGTTT+TGG	0.305862	2:+12892696	MsaT007030.1:CDS
ATGTTAGCAAGGAAGGAGTT+TGG	0.356508	2:+12891151	MsaT007030.1:CDS
GGGTTTAAGAATAATGAATA+TGG	0.371754	2:+12891066	MsaT007030.1:CDS
ACGGGACCTCATAAAGTCTA+TGG	0.389034	2:+12891269	MsaT007030.1:CDS
AACAGTAAAACTCTTTAAAA+CGG	0.389800	2:-12891035	None:intergenic
ATCACCATCAGTCATTGAAT+TGG	0.389903	2:-12892638	None:intergenic
GAAAAGGTGGCGACAATTAG+AGG	0.395021	2:+12892183	MsaT007030.1:CDS
ATGACTGATGGTGATGATTC+CGG	0.408403	2:+12892646	MsaT007030.1:CDS
TTTAGTGGCATTTGAGAAGA+TGG	0.409481	2:+12892159	MsaT007030.1:intron
CAAGATTTAGTGTAAGAAAA+GGG	0.432600	2:+12890977	MsaT007030.1:CDS
TGTCAATCAGTTGAAATTGA+TGG	0.438803	2:+12890874	MsaT007030.1:CDS
ACAAGATTTAGTGTAAGAAA+AGG	0.440176	2:+12890976	MsaT007030.1:CDS
AATTCACCATAGACTTTATG+AGG	0.446268	2:-12891275	None:intergenic
ACAGTAAAACTCTTTAAAAC+GGG	0.452807	2:-12891034	None:intergenic
GACATTTGACATATTTCTCA+TGG	0.454279	2:-12891244	None:intergenic
CTACGTTGATAATTGCTACT+TGG	0.456826	2:-12893480	None:intergenic
AAATATGTCAAATGTCAAAC+GGG	0.464386	2:+12891251	MsaT007030.1:CDS
CGCAACAAATGTCTTTGCTC+AGG	0.472523	2:-12891219	None:intergenic
CTTATGAAAGAGCTGATTCA+AGG	0.480001	2:+12891100	MsaT007030.1:CDS
GGAAGCACTTCCGTGGAGAT+TGG	0.486127	2:+12892343	MsaT007030.1:CDS
GAAATATGTCAAATGTCAAA+CGG	0.486335	2:+12891250	MsaT007030.1:CDS
AATGAGTATCTTAATGGGGC+AGG	0.495180	2:+12892319	MsaT007030.1:CDS
ACCATCAGTCATTGAATTGG+AGG	0.504486	2:-12892635	None:intergenic
CGTTGATAATTGCTACTTGG+TGG	0.516800	2:-12893477	None:intergenic
AGGTTTAATGTTAGCAAGGA+AGG	0.523844	2:+12891144	MsaT007030.1:CDS
AAGGACAAATTGCAAAGCTA+TGG	0.542290	2:+12891119	MsaT007030.1:CDS
ATTATGATCTAATACAAACT+TGG	0.563904	2:-12891181	None:intergenic
AGCGTTGCGGTAAAGAAGAC+CGG	0.568368	2:-12892665	None:intergenic
ATTTAGTGTAAGAAAAGGGA+GGG	0.568911	2:+12890981	MsaT007030.1:CDS
GGCGAGGTTTAATGTTAGCA+AGG	0.569412	2:+12891140	MsaT007030.1:CDS
TAATGAATATGGAGGTGAAG+TGG	0.572461	2:+12891077	MsaT007030.1:CDS
GAGTATCTTAATGGGGCAGG+TGG	0.572748	2:+12892322	MsaT007030.1:CDS
ACCTCCAATTCAATGACTGA+TGG	0.575513	2:+12892634	MsaT007030.1:CDS
GATTTAGTGTAAGAAAAGGG+AGG	0.580368	2:+12890980	MsaT007030.1:CDS
CTGAGCAAAGACATTTGTTG+CGG	0.581932	2:+12891220	MsaT007030.1:CDS
ACTGCAGCTAACCATAGAAG+TGG	0.582272	2:-12892446	None:intergenic
GGCAGGTGGAAGCACTTCCG+TGG	0.590405	2:+12892336	MsaT007030.1:CDS
ATAAAGTCTATGGTGAATTG+TGG	0.590947	2:+12891279	MsaT007030.1:CDS
CATTTGAGAAGATGGTGAAA+AGG	0.603784	2:+12892167	MsaT007030.1:CDS
TTTAAGAATAATGAATATGG+AGG	0.604513	2:+12891069	MsaT007030.1:CDS
TTGAGAAGATGGTGAAAAGG+TGG	0.621585	2:+12892170	MsaT007030.1:CDS
CAAATTGCAAAGCTATGGCG+AGG	0.632194	2:+12891124	MsaT007030.1:CDS
TTTAAATGAGTATCTTAATG+GGG	0.632939	2:+12892315	MsaT007030.1:CDS
TCACTACTGTTTATAACACG+AGG	0.639447	2:-12892241	None:intergenic
AACTCTACGACATGAATCTG+TGG	0.642020	2:+12892264	MsaT007030.1:CDS
AACAAATGTCTTTGCTCAGG+CGG	0.646674	2:-12891216	None:intergenic
ATCACATCGACCAATCTCCA+CGG	0.672242	2:-12892353	None:intergenic
CTACTGTTTATAACACGAGG+AGG	0.687262	2:-12892238	None:intergenic
AAGACTTCAGAATAGCGTTG+CGG	0.703840	2:-12892678	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	12890859	12893522	12890859	ID=MsaG007030
Chr2	mRNA	12890859	12893522	12890859	ID=MsaT007030.1;Parent=MsaG007030
Chr2	exon	12890859	12891300	12890859	ID=MsaT007030.1.exon1;Parent=MsaT007030.1
Chr2	CDS	12890859	12891300	12890859	ID=cds.MsaT007030.1;Parent=MsaT007030.1
Chr2	exon	12892164	12892456	12892164	ID=MsaT007030.1.exon2;Parent=MsaT007030.1
Chr2	CDS	12892164	12892456	12892164	ID=cds.MsaT007030.1;Parent=MsaT007030.1
Chr2	exon	12892616	12892752	12892616	ID=MsaT007030.1.exon3;Parent=MsaT007030.1
Chr2	CDS	12892616	12892752	12892616	ID=cds.MsaT007030.1;Parent=MsaT007030.1
Chr2	exon	12893453	12893522	12893453	ID=MsaT007030.1.exon4;Parent=MsaT007030.1
Chr2	CDS	12893453	12893522	12893453	ID=cds.MsaT007030.1;Parent=MsaT007030.1

Gene Sequence

>MsaT007030.1

ATGGAGATAAATGAATGTCAATCAGTTGAAATTGATGGATGCAAAGATATTTTTCTTGGTCAAGTTGTGAATAACAAAGATGAAGCTTATAATTTATATCAAGCACATGCCTTCAAAACAAGATTTAGTGTAAGAAAAGGGAGGGAGTTATATTATGATAATGAGAGAAAAATCACCCGTTTTAAAGAGTTTTACTGTTCCAAAGAAGGGTTTAAGAATAATGAATATGGAGGTGAAGTGGCTTATGAAAGAGCTGATTCAAGGACAAATTGCAAAGCTATGGCGAGGTTTAATGTTAGCAAGGAAGGAGTTTGGAAAGTTACCAAGTTTGTATTAGATCATAATCATCAACTTGTACCGCCTGAGCAAAGACATTTGTTGCGGTCCATGAGAAATATGTCAAATGTCAAACGGGACCTCATAAAGTCTATGGTGAATTGTGTGGCATTTGAGAAGATGGTGAAAAGGTGGCGACAATTAGAGGTTGAGAACGAATTCAAAAATAGTCAGAGTGCGCCTCCTCGTGTTATAAACAGTAGTGAAACTCTACGACATGAATCTGTGGTATATACTCACAAAATCTTTACACTTTTTTTAAATGAGTATCTTAATGGGGCAGGTGGAAGCACTTCCGTGGAGATTGGTCGATGTGATAATGTGTCATATCATGAAGTTGTGTTGAACATCATCCCCAATAAAAAGTATATCGTGACTTTGGACTCATCCACTTCTATGAGTTTAGAAGAAGATTCTACCTCCAATTCAATGACTGATGGTGATGATTCCGGTCTTCTTTACCGCAACGCTATTCTGAAGTCTTTATACAATTTAGTTTTGGAATCCCAGGAGGACAAAAAAGCACAAAAAATCATGAATCTTGTAATTTTGGTCGGATACCACCAAGTAGCAATTATCAACGTAGACAATGATCAAGTGATCTGA

Protein sequence

>MsaT007030.1

MEINECQSVEIDGCKDIFLGQVVNNKDEAYNLYQAHAFKTRFSVRKGRELYYDNERKITRFKEFYCSKEGFKNNEYGGEVAYERADSRTNCKAMARFNVSKEGVWKVTKFVLDHNHQLVPPEQRHLLRSMRNMSNVKRDLIKSMVNCVAFEKMVKRWRQLEVENEFKNSQSAPPRVINSSETLRHESVVYTHKIFTLFLNEYLNGAGGSTSVEIGRCDNVSYHEVVLNIIPNKKYIVTLDSSTSMSLEEDSTSNSMTDGDDSGLLYRNAILKSLYNLVLESQEDKKAQKIMNLVILVGYHQVAIINVDNDQVI*