AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG007207

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG007207 MtrunA17_Chr2g0290691 99.338 604 4 0 1 604 1 604 0.0 1239
MsaG007207 MtrunA17_Chr7g0227331 72.327 477 109 5 131 604 162 618 0.0 693
MsaG007207 MtrunA17_Chr6g0449401 63.774 530 132 6 113 604 172 679 0.0 689
MsaG007207 MtrunA17_Chr8g0335351 68.254 504 138 6 115 604 276 771 0.0 679
MsaG007207 MtrunA17_Chr7g0250631 65.764 517 156 8 99 604 255 761 0.0 678
MsaG007207 MtrunA17_Chr1g0179101 64.853 441 148 6 127 567 394 827 0.0 588
MsaG007207 MtrunA17_Chr7g0266031 63.029 449 159 6 118 566 407 848 0.0 576
MsaG007207 MtrunA17_Chr2g0309421 62.306 451 156 8 158 604 131 571 0.0 566
MsaG007207 MtrunA17_Chr8g0356291 62.306 451 158 7 159 604 81 524 0.0 564
MsaG007207 MtrunA17_Chr3g0080101 58.017 474 185 6 132 604 342 802 0.0 558
MsaG007207 MtrunA17_Chr4g0063311 56.219 402 147 7 179 561 66 457 2.21e-151 445
MsaG007207 MtrunA17_Chr2g0321101 53.665 382 154 6 183 554 66 434 3.49e-135 402
MsaG007207 MtrunA17_Chr2g0285711 47.907 430 178 8 148 561 26 425 9.53e-131 390
MsaG007207 MtrunA17_Chr8g0381091 50.882 397 156 9 179 561 52 423 1.48e-130 390
MsaG007207 MtrunA17_Chr2g0312641 42.282 447 209 10 157 595 49 454 2.35e-113 347
MsaG007207 MtrunA17_Chr8g0369091 43.489 407 178 5 179 584 572 927 4.44e-109 349
MsaG007207 MtrunA17_Chr4g0030361 42.932 382 164 3 179 560 282 609 6.00e-102 322
MsaG007207 MtrunA17_Chr2g0327561 43.702 389 176 3 179 567 601 946 1.66e-98 322
MsaG007207 MtrunA17_Chr8g0338741 40.000 390 182 13 197 567 11 367 5.45e-78 253
MsaG007207 MtrunA17_Chr2g0329011 38.187 364 180 7 201 561 12 333 5.19e-75 244
MsaG007207 MtrunA17_Chr4g0032761 38.544 371 207 8 201 561 10 369 5.84e-74 243
MsaG007207 MtrunA17_Chr7g0234641 35.040 371 209 8 200 562 7 353 4.38e-65 219
MsaG007207 MtrunA17_Chr5g0428981 33.705 359 186 7 206 563 763 1070 2.79e-55 202
MsaG007207 MtrunA17_Chr4g0018201 33.426 359 187 7 206 563 759 1066 3.69e-55 202
MsaG007207 MtrunA17_Chr6g0478601 33.046 348 182 6 203 549 108 405 4.16e-55 195
MsaG007207 MtrunA17_Chr3g0135951 31.540 409 228 12 185 578 73 444 6.46e-54 191
MsaG007207 MtrunA17_Chr1g0153321 30.691 391 215 10 192 570 94 440 9.55e-49 177
MsaG007207 MtrunA17_Chr1g0187581 31.959 388 211 12 192 569 103 447 7.07e-47 172
MsaG007207 MtrunA17_Chr1g0183651 29.897 388 218 11 192 569 106 449 2.23e-45 169
MsaG007207 MtrunA17_Chr2g0299781 29.340 409 239 11 185 578 92 465 4.15e-45 167
MsaG007207 MtrunA17_Chr7g0261491 29.949 394 214 12 192 569 106 453 1.24e-44 167
MsaG007207 MtrunA17_Chr1g0167351 29.897 388 220 11 192 569 96 441 2.21e-44 166
MsaG007207 MtrunA17_Chr1g0167311 29.581 382 210 10 192 563 101 433 3.63e-42 159
MsaG007207 MtrunA17_Chr7g0245031 39.216 153 91 1 201 353 143 293 1.93e-26 113
MsaG007207 MtrunA17_Chr7g0245031 44.144 111 59 2 440 549 301 409 4.83e-20 93.6
MsaG007207 MtrunA17_Chr4g0059751 36.420 162 90 3 201 353 84 241 9.80e-25 107
MsaG007207 MtrunA17_Chr4g0059751 39.286 112 65 2 440 550 249 358 9.56e-21 95.1
MsaG007207 MtrunA17_Chr1g0197721 36.552 145 90 1 206 350 51 193 1.45e-23 104
MsaG007207 MtrunA17_Chr1g0197721 34.783 138 84 3 424 560 202 334 1.72e-13 73.2
MsaG007207 MtrunA17_Chr3g0125381 41.071 112 62 1 434 545 100 207 6.64e-21 91.7
MsaG007207 MtrunA17_Chr3g0125381 32.000 100 66 1 256 355 2 99 7.83e-11 62.4
MsaG007207 MtrunA17_Chr2g0286501 35.714 154 89 4 203 355 46 190 5.10e-19 91.7
MsaG007207 MtrunA17_Chr3g0140631 33.553 152 99 1 203 354 34 183 8.90e-19 87.4
MsaG007207 MtrunA17_Chr3g0140631 35.185 108 66 1 437 544 185 288 4.09e-15 76.6
MsaG007207 MtrunA17_Chr8g0351491 31.875 160 105 2 197 355 7 163 9.06e-18 84.0
MsaG007207 MtrunA17_Chr8g0351491 39.806 103 58 1 443 545 170 268 1.29e-15 77.4
MsaG007207 MtrunA17_Chr7g0272841 30.645 186 116 4 206 386 68 245 4.34e-17 85.1
MsaG007207 MtrunA17_Chr2g0284031 29.787 188 118 3 201 388 26 199 2.44e-16 82.4
MsaG007207 MtrunA17_Chr8g0353621 31.013 158 107 1 198 355 2 157 3.91e-16 79.0
MsaG007207 MtrunA17_Chr8g0353621 39.604 101 57 1 443 543 164 260 2.66e-15 76.6
MsaG007207 MtrunA17_Chr4g0025671 29.221 154 103 3 203 353 5 155 6.26e-16 81.6
MsaG007207 MtrunA17_Chr8g0379091 29.255 188 119 3 201 388 21 194 7.81e-16 80.5
MsaG007207 MtrunA17_Chr1g0190831 29.412 153 104 3 203 353 1 151 9.13e-16 80.9
MsaG007207 MtrunA17_Chr2g0321841 29.221 154 103 3 203 353 1 151 1.06e-15 80.9
MsaG007207 MtrunA17_Chr4g0013131 29.936 157 107 1 197 353 3 156 2.93e-15 78.6
MsaG007207 MtrunA17_Chr6g0486661 34.884 129 76 4 437 560 909 1034 3.35e-15 79.3
MsaG007207 MtrunA17_Chr3g0107051 30.108 186 116 4 203 388 18 189 3.43e-15 78.2
MsaG007207 MtrunA17_Chr1g0205421 31.013 158 102 3 197 352 3 155 1.64e-14 76.3
MsaG007207 MtrunA17_Chr5g0432491 32.450 151 100 2 203 353 20 168 1.77e-14 75.9
MsaG007207 MtrunA17_Chr1g0173921 26.316 152 110 2 203 353 1 151 1.93e-14 77.0
MsaG007207 MtrunA17_Chr3g0132591 33.146 178 95 4 212 388 118 272 1.97e-14 75.9
MsaG007207 MtrunA17_Chr7g0260191 27.451 153 107 3 203 353 1 151 2.24e-14 76.3
MsaG007207 MtrunA17_Chr3g0114511 24.409 254 176 5 198 440 24 272 2.58e-14 75.5
MsaG007207 MtrunA17_Chr1g0188031 30.189 159 95 4 203 353 17 167 2.85e-14 75.5
MsaG007207 MtrunA17_Chr2g0302431 30.247 162 111 2 192 353 6 165 3.23e-14 75.5
MsaG007207 MtrunA17_Chr3g0107011 28.495 186 119 4 203 388 11 182 3.72e-14 75.1
MsaG007207 MtrunA17_Chr7g0258051 26.923 156 108 3 203 355 13 165 4.20e-14 75.5
MsaG007207 MtrunA17_Chr8g0346071 25.616 203 131 4 186 388 2 184 1.08e-13 73.6
MsaG007207 MtrunA17_Chr1g0200601 32.335 167 101 5 192 354 22 180 1.27e-13 73.6
MsaG007207 MtrunA17_Chr2g0304111 28.000 150 106 2 204 353 21 168 1.41e-13 73.2
MsaG007207 MtrunA17_Chr4g0074111 26.984 189 124 3 200 388 12 186 1.42e-13 72.8
MsaG007207 MtrunA17_Chr1g0170551 32.075 106 66 2 443 548 162 261 1.61e-13 74.3
MsaG007207 MtrunA17_Chr1g0170551 30.178 169 110 4 206 373 7 168 1.85e-12 70.9
MsaG007207 MtrunA17_Chr1g0185221 29.032 155 102 4 203 353 1 151 2.30e-13 73.2
MsaG007207 MtrunA17_Chr5g0419441 27.545 167 116 3 206 372 239 400 2.57e-13 73.2
MsaG007207 MtrunA17_Chr1g0205931 27.174 184 117 4 194 372 53 224 4.30e-13 72.4
MsaG007207 MtrunA17_Chr1g0202831 31.788 151 89 5 210 353 415 558 4.82e-13 72.4
MsaG007207 MtrunA17_Chr1g0203881 32.895 152 96 3 206 353 41 190 7.64e-13 71.2
MsaG007207 MtrunA17_Chr7g0274941 31.293 147 96 3 206 350 16 159 8.09e-13 69.7
MsaG007207 MtrunA17_Chr8g0385341 30.719 153 100 3 206 354 30 180 8.09e-13 71.2
MsaG007207 MtrunA17_Chr4g0074811 33.516 182 109 8 206 378 91 269 8.11e-13 71.2
MsaG007207 MtrunA17_Chr1g0166101 30.263 152 103 2 203 353 21 170 8.52e-13 70.5
MsaG007207 MtrunA17_Chr5g0432471 27.815 151 106 2 203 353 9 156 9.32e-13 70.9
MsaG007207 MtrunA17_Chr4g0047191 34.653 101 66 0 253 353 94 194 1.09e-12 69.7
MsaG007207 MtrunA17_Chr7g0244521 28.421 190 122 5 199 388 5 180 1.18e-12 70.5
MsaG007207 MtrunA17_Chr4g0047211 34.653 101 66 0 253 353 89 189 1.36e-12 69.3
MsaG007207 MtrunA17_Chr5g0428031 26.490 151 109 2 203 353 6 154 1.51e-12 70.1
MsaG007207 MtrunA17_Chr1g0176421 30.939 181 115 5 206 378 161 339 1.90e-12 70.1
MsaG007207 MtrunA17_Chr7g0256001 31.902 163 101 5 205 360 140 299 2.09e-12 70.1
MsaG007207 MtrunA17_Chr8g0346081 25.000 172 122 2 195 366 11 175 2.39e-12 69.3
MsaG007207 MtrunA17_Chr4g0008561 34.615 104 62 3 443 544 177 276 4.07e-12 69.3
MsaG007207 MtrunA17_Chr5g0448721 29.940 167 113 4 206 370 96 260 5.63e-12 68.6
MsaG007207 MtrunA17_Chr3g0130151 29.605 152 103 2 204 353 242 391 5.97e-12 68.6
MsaG007207 MtrunA17_Chr2g0284011 29.167 192 118 7 199 388 5 180 7.42e-12 67.8
MsaG007207 MtrunA17_Chr2g0276831 32.727 165 96 6 210 367 14 170 7.62e-12 67.4
MsaG007207 MtrunA17_Chr8g0386981 29.861 144 97 2 212 353 414 555 8.65e-12 68.6
MsaG007207 MtrunA17_Chr1g0190131 28.082 146 101 2 206 350 9 151 9.02e-12 66.2
MsaG007207 MtrunA17_Chr1g0173541 33.577 137 88 3 203 338 49 183 1.48e-11 67.0
MsaG007207 MtrunA17_Chr1g0188991 26.316 190 125 4 206 394 15 190 1.62e-11 67.4
MsaG007207 MtrunA17_Chr3g0091311 28.846 156 108 2 198 353 4 156 1.71e-11 65.1
MsaG007207 MtrunA17_Chr4g0063881 27.152 151 108 1 203 353 8 156 1.89e-11 66.6
MsaG007207 MtrunA17_Chr2g0317001 27.703 148 103 2 206 353 15 158 2.09e-11 67.0
MsaG007207 MtrunA17_Chr5g0441691 30.065 153 101 4 206 354 68 218 2.22e-11 66.6
MsaG007207 MtrunA17_Chr1g0170281 30.719 153 100 4 206 354 118 268 2.24e-11 66.6
MsaG007207 MtrunA17_Chr5g0441011 29.412 153 102 3 203 353 10 158 3.22e-11 65.9
MsaG007207 MtrunA17_Chr8g0384301 29.412 153 104 2 203 353 296 446 3.40e-11 66.2
MsaG007207 MtrunA17_Chr4g0038501 24.020 204 146 3 206 409 20 214 4.78e-11 66.2
MsaG007207 MtrunA17_Chr4g0000431 29.870 154 104 3 201 353 19 169 4.82e-11 65.9
MsaG007207 MtrunA17_Chr8g0374701 31.013 158 97 6 201 353 131 281 6.75e-11 65.1
MsaG007207 MtrunA17_Chr0c02g0489761 30.065 153 101 4 206 354 78 228 7.23e-11 65.1
MsaG007207 MtrunA17_Chr4g0045261 30.935 139 86 4 201 338 143 272 7.94e-11 65.1
MsaG007207 MtrunA17_Chr2g0299991 28.395 162 109 4 194 353 58 214 8.83e-11 63.9
MsaG007207 MtrunA17_Chr6g0453681 28.477 151 106 2 203 353 16 164 9.77e-11 64.3
MsaG007207 MtrunA17_Chr8g0388891 23.188 276 184 10 83 353 29 281 9.91e-11 63.9
MsaG007207 MtrunA17_Chr4g0001331 29.054 148 102 2 206 353 20 164 9.93e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG007207 AT5G47750.1 77.544 570 103 9 42 604 35 586 0.0 860
MsaG007207 AT4G26610.1 72.316 531 116 7 80 604 1 506 0.0 761
MsaG007207 AT5G55910.2 74.706 510 99 8 109 604 5 498 0.0 742
MsaG007207 AT5G55910.1 74.706 510 99 8 109 604 5 498 0.0 742
MsaG007207 AT2G44830.2 63.960 505 159 9 115 604 269 765 0.0 647
MsaG007207 AT2G44830.3 63.960 505 159 9 115 604 269 765 0.0 647
MsaG007207 AT2G44830.1 63.960 505 159 9 115 604 269 765 0.0 647
MsaG007207 AT3G27580.2 64.272 515 162 10 103 604 73 578 0.0 622
MsaG007207 AT3G27580.1 64.272 515 162 10 103 604 73 578 0.0 622
MsaG007207 AT5G40030.1 59.921 504 181 10 106 604 12 499 0.0 588
MsaG007207 AT1G79250.1 64.588 449 138 7 172 604 112 555 0.0 574
MsaG007207 AT1G79250.3 64.588 449 138 7 172 604 112 555 0.0 574
MsaG007207 AT1G79250.2 64.588 449 138 7 172 604 112 555 0.0 574
MsaG007207 AT1G79250.4 64.588 449 138 7 172 604 112 555 0.0 574
MsaG007207 AT3G52890.2 56.333 529 192 10 89 604 432 934 0.0 571
MsaG007207 AT3G52890.4 56.333 529 192 10 89 604 432 934 0.0 571
MsaG007207 AT3G52890.1 56.333 529 192 10 89 604 432 934 0.0 571
MsaG007207 AT3G52890.3 56.333 529 192 10 89 604 432 934 0.0 571
MsaG007207 AT5G03640.2 52.996 534 186 9 100 604 429 926 0.0 557
MsaG007207 AT5G03640.1 52.996 534 186 9 100 604 429 926 0.0 557
MsaG007207 AT3G12690.1 67.250 400 113 4 179 578 158 539 0.0 553
MsaG007207 AT3G12690.3 67.250 400 113 4 179 578 158 539 0.0 553
MsaG007207 AT3G12690.2 67.250 400 113 4 179 578 158 539 0.0 553
MsaG007207 AT2G36350.1 57.816 467 180 6 142 604 496 949 0.0 548
MsaG007207 AT1G16440.1 62.929 437 128 9 179 604 86 499 0.0 541
MsaG007207 AT2G26700.1 47.699 478 187 9 161 585 32 499 7.33e-141 419
MsaG007207 AT3G44610.1 56.044 364 134 7 206 554 71 423 2.85e-135 402
MsaG007207 AT2G34650.1 46.993 449 176 12 158 578 12 426 3.43e-129 387
MsaG007207 AT3G14370.1 44.307 404 179 6 181 575 61 427 5.79e-111 341
MsaG007207 AT5G58140.6 45.144 381 158 5 180 560 551 880 1.07e-106 342
MsaG007207 AT5G58140.7 45.144 381 158 5 180 560 551 880 1.07e-106 342
MsaG007207 AT5G58140.5 45.144 381 158 5 180 560 551 880 1.07e-106 342
MsaG007207 AT5G58140.2 45.144 381 158 5 180 560 551 880 1.07e-106 342
MsaG007207 AT5G58140.1 45.144 381 158 5 180 560 551 880 1.07e-106 342
MsaG007207 AT5G58140.3 45.455 374 153 5 180 553 551 873 4.69e-105 338
MsaG007207 AT1G53700.1 43.735 407 180 8 181 577 66 433 9.68e-102 317
MsaG007207 AT3G45780.2 40.394 406 192 4 156 560 612 968 5.42e-91 302
MsaG007207 AT3G45780.1 40.394 406 192 4 156 560 612 968 5.42e-91 302
MsaG007207 AT1G51170.1 39.247 372 185 11 201 561 17 358 1.76e-73 241
MsaG007207 AT4G13000.1 36.412 379 184 11 200 567 14 346 6.11e-68 226
MsaG007207 AT3G25250.1 34.656 378 190 9 200 561 11 347 4.18e-67 225
MsaG007207 AT3G20830.1 38.070 373 190 10 201 561 16 359 4.45e-66 222
MsaG007207 AT1G45160.2 33.967 368 184 7 201 564 665 977 2.78e-53 197
MsaG007207 AT1G45160.1 33.967 368 184 7 201 564 665 977 5.72e-53 196
MsaG007207 AT3G17850.1 34.473 351 173 8 203 549 879 1176 4.62e-52 193
MsaG007207 AT5G62310.1 32.464 345 182 6 206 549 754 1048 2.12e-51 191
MsaG007207 AT1G30640.3 30.846 402 222 12 191 577 12 372 7.94e-51 182
MsaG007207 AT1G30640.2 30.846 402 222 12 191 577 105 465 9.87e-51 184
MsaG007207 AT1G30640.1 30.846 402 222 12 191 577 105 465 9.87e-51 184
MsaG007207 AT4G33080.2 29.426 418 241 12 174 573 59 440 8.97e-50 181
MsaG007207 AT4G33080.1 29.426 418 241 12 174 573 59 440 1.02e-49 181
MsaG007207 AT5G09890.1 31.139 395 220 10 192 575 88 441 5.29e-47 173
MsaG007207 AT5G09890.2 31.139 395 220 10 192 575 88 441 5.43e-47 173
MsaG007207 AT2G20470.3 30.691 391 210 11 192 569 110 452 5.57e-46 171
MsaG007207 AT2G20470.2 30.691 391 210 11 192 569 110 452 1.17e-45 170
MsaG007207 AT2G20470.1 30.691 391 210 11 192 569 110 452 1.17e-45 170
MsaG007207 AT3G23310.1 27.193 456 283 10 114 563 28 440 3.50e-45 169
MsaG007207 AT4G14350.2 26.872 454 283 9 115 563 28 437 3.85e-44 166
MsaG007207 AT4G14350.1 26.872 454 283 9 115 563 28 437 3.85e-44 166
MsaG007207 AT4G14350.4 26.872 454 283 9 115 563 28 437 3.85e-44 166
MsaG007207 AT4G14350.3 26.872 454 283 9 115 563 28 437 5.15e-44 165
MsaG007207 AT2G19400.1 30.541 370 218 9 185 549 84 419 6.99e-42 159
MsaG007207 AT1G03920.2 30.053 376 215 9 192 563 10 341 1.36e-41 157
MsaG007207 AT1G03920.1 30.053 376 215 9 192 563 123 454 1.59e-41 159
MsaG007207 AT1G03920.3 30.053 376 215 9 192 563 123 454 1.59e-41 159
MsaG007207 AT5G58140.4 46.565 131 70 0 180 310 551 681 7.78e-32 131
MsaG007207 AT3G08720.1 39.355 155 92 1 199 353 133 285 2.72e-27 115
MsaG007207 AT3G08720.1 37.037 162 97 4 438 597 291 449 1.62e-24 107
MsaG007207 AT3G08720.3 39.355 155 92 1 199 353 133 285 2.72e-27 115
MsaG007207 AT3G08720.3 37.037 162 97 4 438 597 291 449 1.62e-24 107
MsaG007207 AT3G08720.4 39.355 155 92 1 199 353 133 285 2.72e-27 115
MsaG007207 AT3G08720.4 37.037 162 97 4 438 597 291 449 1.62e-24 107
MsaG007207 AT3G08720.2 39.355 155 92 1 199 353 133 285 2.72e-27 115
MsaG007207 AT3G08720.2 37.037 162 97 4 438 597 291 449 1.62e-24 107
MsaG007207 AT3G08730.1 38.710 155 93 1 199 353 127 279 7.56e-27 114
MsaG007207 AT3G08730.1 46.903 113 56 3 438 549 285 394 8.55e-25 108
MsaG007207 AT3G08730.2 38.710 155 93 1 199 353 127 279 7.56e-27 114
MsaG007207 AT3G08730.2 46.903 113 56 3 438 549 285 394 8.55e-25 108
MsaG007207 AT1G48490.3 42.222 135 71 3 421 549 983 1116 3.56e-25 111
MsaG007207 AT1G48490.3 36.250 160 99 2 194 353 817 973 2.72e-24 108
MsaG007207 AT1G48490.2 42.222 135 71 3 421 549 983 1116 3.56e-25 111
MsaG007207 AT1G48490.2 36.250 160 99 2 194 353 817 973 2.72e-24 108
MsaG007207 AT1G48490.1 42.222 135 71 3 421 549 983 1116 3.56e-25 111
MsaG007207 AT1G48490.1 36.250 160 99 2 194 353 817 973 2.72e-24 108
MsaG007207 AT1G48490.4 42.222 135 71 3 421 549 984 1117 3.69e-25 111
MsaG007207 AT1G48490.4 36.250 160 99 2 194 353 818 974 2.79e-24 108
MsaG007207 AT5G18700.1 38.411 151 85 3 203 353 1 143 4.09e-23 105
MsaG007207 AT5G04510.2 35.172 145 92 1 206 350 44 186 6.90e-23 102
MsaG007207 AT5G04510.2 34.194 155 88 4 424 577 195 336 2.49e-19 91.3
MsaG007207 AT5G04510.3 35.172 145 92 1 206 350 44 186 8.96e-23 99.8
MsaG007207 AT5G04510.1 35.172 145 92 1 206 350 44 186 9.86e-23 102
MsaG007207 AT5G04510.1 34.416 154 87 4 425 577 196 336 2.27e-19 92.0
MsaG007207 AT3G10540.1 34.483 145 93 1 206 350 45 187 9.30e-22 99.4
MsaG007207 AT3G10540.1 34.416 154 87 4 425 577 197 337 2.99e-19 91.7
MsaG007207 AT2G20050.1 40.517 116 63 4 440 552 934 1046 2.36e-18 90.1
MsaG007207 AT2G20050.2 40.517 116 63 4 440 552 931 1043 2.48e-18 90.1
MsaG007207 AT2G45490.2 33.333 153 100 2 203 355 19 169 3.21e-18 85.1
MsaG007207 AT2G45490.2 40.506 79 47 0 443 521 176 254 5.72e-12 66.6
MsaG007207 AT2G45490.1 33.333 153 100 2 203 355 19 169 3.33e-18 85.9
MsaG007207 AT2G45490.1 41.176 102 56 1 443 544 176 273 1.79e-17 83.6
MsaG007207 AT1G12680.1 34.416 154 91 3 210 362 111 255 4.90e-18 87.8
MsaG007207 AT3G61960.1 25.215 349 167 12 203 544 7 268 6.67e-18 87.8
MsaG007207 AT3G61960.2 25.146 342 166 11 198 532 2 260 1.02e-17 87.4
MsaG007207 AT4G18700.1 29.897 194 122 3 195 388 15 194 1.02e-17 87.0
MsaG007207 AT3G06030.1 32.039 206 115 7 187 386 59 245 1.12e-17 87.4
MsaG007207 AT5G45810.1 29.101 189 120 3 200 388 22 196 3.98e-17 85.1
MsaG007207 AT2G25880.1 32.886 149 98 1 206 354 25 171 9.66e-17 81.6
MsaG007207 AT2G25880.1 37.963 108 63 1 437 544 173 276 4.85e-16 79.3
MsaG007207 AT1G29230.1 29.570 186 117 3 203 388 71 242 1.01e-16 84.0
MsaG007207 AT2G25880.4 32.886 149 98 1 206 354 38 184 1.59e-16 81.3
MsaG007207 AT2G25880.4 37.963 108 63 1 437 544 186 289 5.32e-16 79.7
MsaG007207 AT4G32830.1 33.553 152 99 1 203 354 28 177 2.22e-16 80.5
MsaG007207 AT4G32830.1 36.111 108 65 1 437 544 179 282 3.54e-15 77.0
MsaG007207 AT2G25880.2 37.963 108 63 1 437 544 141 244 2.65e-16 79.7
MsaG007207 AT2G25880.3 32.886 149 98 1 206 354 86 232 2.77e-16 81.3
MsaG007207 AT2G25880.3 38.318 107 62 1 437 543 234 336 1.14e-15 79.3
MsaG007207 AT1G09000.1 29.570 186 118 4 206 386 69 246 4.42e-16 82.4
MsaG007207 AT3G04810.2 29.412 153 104 3 203 353 1 151 4.56e-16 82.0
MsaG007207 AT3G04810.1 29.412 153 104 3 203 353 1 151 4.56e-16 82.0
MsaG007207 AT3G04810.3 29.412 153 104 3 203 353 1 151 4.56e-16 82.0
MsaG007207 AT1G54960.1 31.351 185 108 6 194 372 66 237 4.97e-16 82.0
MsaG007207 AT1G54960.2 31.351 185 108 6 194 372 66 237 4.97e-16 82.0
MsaG007207 AT1G09000.2 29.570 186 118 4 206 386 69 246 5.24e-16 82.0
MsaG007207 AT1G35670.1 34.132 167 98 5 192 354 18 176 1.29e-15 80.5
MsaG007207 AT5G57630.2 30.573 157 102 3 199 353 5 156 2.47e-15 79.0
MsaG007207 AT5G57630.1 30.573 157 102 3 199 353 5 156 2.95e-15 78.6
MsaG007207 AT3G44200.2 29.032 155 102 4 203 353 5 155 3.53e-15 79.7
MsaG007207 AT3G44200.1 29.032 155 102 4 203 353 5 155 3.53e-15 79.7
MsaG007207 AT1G54510.4 30.323 155 100 4 203 353 1 151 4.92e-15 79.0
MsaG007207 AT1G54510.2 30.323 155 100 4 203 353 1 151 4.92e-15 79.0
MsaG007207 AT1G54510.1 30.323 155 100 4 203 353 1 151 4.92e-15 79.0
MsaG007207 AT1G54510.3 30.323 155 100 4 203 353 1 151 4.92e-15 79.0
MsaG007207 AT5G28290.1 29.412 153 104 3 203 353 1 151 5.25e-15 78.6
MsaG007207 AT5G28290.2 29.412 153 104 3 203 353 1 151 5.25e-15 78.6
MsaG007207 AT5G10930.1 30.688 189 112 8 203 388 9 181 5.67e-15 78.2
MsaG007207 AT5G28290.3 29.412 153 104 3 203 353 1 151 5.80e-15 78.6
MsaG007207 AT3G63280.2 27.451 153 107 3 203 353 1 151 9.10e-15 77.8
MsaG007207 AT3G63280.3 27.451 153 107 3 203 353 1 151 9.10e-15 77.8
MsaG007207 AT3G63280.1 27.451 153 107 3 203 353 1 151 9.10e-15 77.8
MsaG007207 AT2G30360.1 31.579 152 101 2 203 353 18 167 1.19e-14 77.0
MsaG007207 AT3G63280.4 27.451 153 107 3 203 353 55 205 2.21e-14 76.6
MsaG007207 AT3G17510.1 31.818 154 103 2 200 353 14 165 3.03e-14 75.9
MsaG007207 AT2G25090.1 30.625 160 106 4 196 353 5 161 3.82e-14 75.5
MsaG007207 AT2G34180.1 27.320 194 127 3 195 388 46 225 6.72e-14 75.1
MsaG007207 AT4G24400.1 26.829 164 118 2 203 366 6 167 9.05e-14 74.3
MsaG007207 AT4G24400.2 26.829 164 118 2 203 366 6 167 1.11e-13 73.9
MsaG007207 AT3G23000.1 29.375 160 94 4 203 353 22 171 1.91e-13 73.2
MsaG007207 AT4G09570.1 32.927 164 98 5 195 354 20 175 1.92e-13 73.6
MsaG007207 AT5G45820.1 28.662 157 109 2 197 353 3 156 4.13e-13 72.0
MsaG007207 AT4G14580.1 30.769 156 105 3 199 353 14 167 4.47e-13 72.0
MsaG007207 AT1G50240.3 33.981 103 62 2 443 545 161 257 4.64e-13 73.2
MsaG007207 AT1G50240.3 29.885 174 114 4 201 373 1 167 1.03e-12 72.0
MsaG007207 AT1G50240.2 33.981 103 62 2 443 545 161 257 4.64e-13 73.2
MsaG007207 AT1G50240.2 29.885 174 114 4 201 373 1 167 1.03e-12 72.0
MsaG007207 AT5G25110.1 26.344 186 123 4 203 388 40 211 4.70e-13 72.4
MsaG007207 AT5G21326.1 31.373 153 99 4 203 353 10 158 4.89e-13 72.0
MsaG007207 AT5G01820.1 34.375 160 97 4 196 353 13 166 6.45e-13 71.6
MsaG007207 AT3G01090.3 29.801 151 104 2 203 353 16 164 6.75e-13 71.6
MsaG007207 AT3G01090.1 29.801 151 104 2 203 353 16 164 6.75e-13 71.6
MsaG007207 AT3G01090.2 29.801 151 104 2 203 353 39 187 6.92e-13 72.0
MsaG007207 AT4G26070.4 29.949 197 118 7 172 353 20 211 9.16e-13 70.5
MsaG007207 AT4G26070.1 31.481 162 104 5 194 353 56 212 9.36e-13 70.1
MsaG007207 AT1G30270.1 29.412 153 102 3 203 353 28 176 9.43e-13 71.2
MsaG007207 AT2G46700.1 34.127 126 78 3 232 353 172 296 1.18e-12 71.2
MsaG007207 AT4G26070.5 31.481 162 104 5 194 353 43 199 1.20e-12 70.1
MsaG007207 AT4G26070.2 31.481 162 104 5 194 353 56 212 1.34e-12 70.1
MsaG007207 AT4G26070.3 31.481 162 104 5 194 353 56 212 1.34e-12 70.1
MsaG007207 AT2G38490.1 33.766 154 93 4 203 353 25 172 1.59e-12 70.5
MsaG007207 AT1G30270.2 29.412 153 102 3 203 353 28 176 1.61e-12 70.5
MsaG007207 AT4G04720.2 30.719 153 100 3 206 354 80 230 1.63e-12 70.5
MsaG007207 AT4G04720.1 30.719 153 100 3 206 354 80 230 1.63e-12 70.5
MsaG007207 AT2G35890.2 26.446 242 165 7 127 360 50 286 1.64e-12 70.5
MsaG007207 AT2G35890.1 26.446 242 165 7 127 360 50 286 1.64e-12 70.5
MsaG007207 AT5G01810.1 29.897 194 118 6 197 388 3 180 2.07e-12 69.7
MsaG007207 AT5G01810.2 29.897 194 118 6 197 388 3 180 2.07e-12 69.7
MsaG007207 AT5G01810.3 29.897 194 118 6 197 388 3 180 2.19e-12 69.3
MsaG007207 AT3G29160.3 29.801 151 104 2 203 353 17 165 2.33e-12 69.3
MsaG007207 AT1G50700.3 32.680 153 97 4 206 354 73 223 2.40e-12 70.1
MsaG007207 AT2G41860.1 32.026 153 98 4 206 354 54 204 2.59e-12 70.1
MsaG007207 AT2G41860.2 32.026 153 98 4 206 354 54 204 2.70e-12 70.1
MsaG007207 AT1G53570.7 28.049 164 114 2 202 363 210 371 2.75e-12 70.1
MsaG007207 AT5G39440.1 31.788 151 101 2 203 353 16 164 3.02e-12 69.7
MsaG007207 AT1G53570.6 28.049 164 114 2 202 363 210 371 3.10e-12 69.7
MsaG007207 AT5G35410.2 27.815 151 107 2 203 353 8 156 3.26e-12 68.9
MsaG007207 AT1G50700.1 33.333 153 96 5 206 354 73 223 3.63e-12 69.7
MsaG007207 AT3G29160.1 29.801 151 104 2 203 353 17 165 3.69e-12 69.3
MsaG007207 AT3G29160.2 29.801 151 104 2 203 353 17 165 3.69e-12 69.3
MsaG007207 AT1G53570.2 28.049 164 114 2 202 363 210 371 4.13e-12 69.7
MsaG007207 AT1G53570.3 28.049 164 114 2 202 363 210 371 4.13e-12 69.7
MsaG007207 AT3G20410.2 32.026 153 98 4 206 354 91 241 4.23e-12 69.3
MsaG007207 AT3G20410.1 32.026 153 98 4 206 354 91 241 4.23e-12 69.3
MsaG007207 AT1G53570.1 28.049 164 114 2 202 363 210 371 4.32e-12 69.3
MsaG007207 AT1G53570.4 28.049 164 114 2 202 363 210 371 4.35e-12 69.3
MsaG007207 AT4G29810.2 28.571 210 136 6 147 353 25 223 5.53e-12 68.2
MsaG007207 AT2G26980.3 28.758 153 103 4 203 353 11 159 5.60e-12 68.6
MsaG007207 AT1G50700.2 33.333 153 96 5 206 354 73 223 5.86e-12 68.9
MsaG007207 AT3G50310.1 26.768 198 124 6 253 435 48 239 6.06e-12 67.8
MsaG007207 AT4G29810.3 28.571 210 136 6 147 353 25 223 6.38e-12 67.8
MsaG007207 AT2G26980.4 28.758 153 103 4 203 353 21 169 6.44e-12 68.6
MsaG007207 AT2G26980.1 28.758 153 103 4 203 353 11 159 6.52e-12 68.2
MsaG007207 AT5G35410.1 27.815 151 107 2 203 353 8 156 6.62e-12 68.6
MsaG007207 AT1G69220.1 29.054 148 102 2 206 353 249 393 7.32e-12 68.9
MsaG007207 AT1G73500.1 32.298 161 90 6 209 365 50 195 7.34e-12 67.4
MsaG007207 AT3G20860.1 24.503 151 113 1 203 353 1 150 8.14e-12 68.2
MsaG007207 AT4G29810.1 30.723 166 110 4 189 353 53 214 9.39e-12 67.4
MsaG007207 AT3G10660.2 30.387 181 116 5 206 378 186 364 1.07e-11 68.2
MsaG007207 AT3G10660.1 30.387 181 116 5 206 378 186 364 1.07e-11 68.2
MsaG007207 AT2G26980.5 28.758 153 103 4 203 353 11 159 1.10e-11 67.8
MsaG007207 AT4G35310.2 29.341 167 114 4 206 370 97 261 1.24e-11 67.8
MsaG007207 AT4G35310.1 29.341 167 114 4 206 370 97 261 1.24e-11 67.8
MsaG007207 AT4G14480.1 28.859 149 103 2 206 353 15 161 1.25e-11 67.8
MsaG007207 AT2G26980.2 28.758 153 103 4 203 353 11 159 1.35e-11 65.9
MsaG007207 AT5G58380.1 30.282 142 96 2 212 353 18 156 1.46e-11 67.4
MsaG007207 AT5G58950.1 28.814 118 79 2 238 353 243 357 1.64e-11 67.4
MsaG007207 AT1G01140.3 26.347 167 116 3 187 353 5 164 2.15e-11 67.0
MsaG007207 AT1G01140.1 26.347 167 116 3 187 353 5 164 2.16e-11 67.0
MsaG007207 AT5G24430.1 29.936 157 102 4 204 353 141 296 2.19e-11 67.4
MsaG007207 AT2G17890.1 30.405 148 99 2 210 353 112 259 2.21e-11 67.0
MsaG007207 AT1G01140.2 26.347 167 116 3 187 353 5 164 2.31e-11 66.6
MsaG007207 AT3G57530.1 33.582 134 86 3 206 338 63 194 2.41e-11 67.0
MsaG007207 AT1G53165.1 27.517 149 101 3 205 353 17 158 2.56e-11 67.0
MsaG007207 AT1G53165.3 27.517 149 101 3 205 353 17 158 2.64e-11 67.0
MsaG007207 AT2G01820.1 33.529 170 98 7 190 352 574 735 2.78e-11 67.4
MsaG007207 AT1G53165.2 27.517 149 101 3 205 353 17 158 2.85e-11 67.0
MsaG007207 AT5G66210.6 28.758 153 105 2 205 353 61 213 2.88e-11 66.2
MsaG007207 AT5G66210.4 28.758 153 105 2 205 353 61 213 2.88e-11 66.2
MsaG007207 AT2G17290.1 30.573 157 105 4 206 360 85 239 2.92e-11 66.6
MsaG007207 AT2G17290.2 30.573 157 105 4 206 360 85 239 2.92e-11 66.6
MsaG007207 AT4G24100.1 29.054 148 103 1 206 353 33 178 2.96e-11 67.0
MsaG007207 AT4G24100.2 29.054 148 103 1 206 353 33 178 3.07e-11 67.0
MsaG007207 AT5G66210.3 28.758 153 105 2 205 353 61 213 3.31e-11 66.2
MsaG007207 AT3G57530.2 32.026 153 98 4 206 354 63 213 3.59e-11 65.9
MsaG007207 AT4G24100.4 29.054 148 103 1 206 353 49 194 3.82e-11 66.6
MsaG007207 AT5G66210.5 28.758 153 105 2 205 353 61 213 4.01e-11 66.2
MsaG007207 AT4G24100.3 29.054 148 103 1 206 353 49 194 4.03e-11 66.6
MsaG007207 AT1G32320.1 32.192 146 89 3 209 353 51 187 4.47e-11 64.7
MsaG007207 AT5G66210.1 28.758 153 105 2 205 353 61 213 4.79e-11 65.9
MsaG007207 AT5G66210.2 28.758 153 105 2 205 353 61 213 4.79e-11 65.9
MsaG007207 AT5G19360.1 30.065 153 101 4 206 354 68 218 5.32e-11 65.9
MsaG007207 AT1G48260.1 29.870 154 106 2 200 353 5 156 6.65e-11 65.1
MsaG007207 AT5G12180.1 30.065 153 101 4 206 354 73 223 6.67e-11 65.5
MsaG007207 AT3G21220.2 29.936 157 98 4 199 353 63 209 9.25e-11 64.3
MsaG007207 AT3G21220.1 29.936 157 98 4 199 353 63 209 9.25e-11 64.3
MsaG007207 AT4G36070.1 27.451 153 107 2 205 353 70 222 9.72e-11 65.1

Find 158 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCACCCTTGATTATTTC+AGG 0.111224 2:-14993003 None:intergenic
TAACCAGTATTCTTTCTTAA+AGG 0.161732 2:-14992760 None:intergenic
GTTTGGCAAAACTCCGTTTA+AGG 0.192811 2:+14993080 MsaT007207.1:CDS
TTGCAGCAAGGGATCTTATC+AGG 0.245422 2:+14993178 MsaT007207.1:CDS
TTGATTGCCAAGTTCGGTTT+TGG 0.277363 2:-14992899 None:intergenic
TTGTCAGAACCTTTCTGATT+AGG 0.293830 2:-14993414 None:intergenic
AGCCAGAAAATGTTCTTGTT+AGG 0.303331 2:+14992644 MsaT007207.1:CDS
AAGCTAACAACAGGTGCTTC+TGG 0.322983 2:-14993156 None:intergenic
TTCTCAAACTCAACAGCCTT+TGG 0.340147 2:-14993327 None:intergenic
TTCCTATATGAGTTGTTGTT+TGG 0.343013 2:+14993063 MsaT007207.1:CDS
AGAGATGGAGCATTGGGTTT+AGG 0.353624 2:+14991424 MsaT007207.1:CDS
CTGAGTAGTAAATTCGGTTC+TGG 0.371104 2:+14991073 MsaT007207.1:CDS
AAACAGCGTGGCTCGGTTCC+CGG 0.372295 2:-14993106 None:intergenic
AGACTGGGTTGTGGAGATAT+TGG 0.372630 2:+14991466 MsaT007207.1:CDS
GTTGTTTCTGCCGAAGAGTA+TGG 0.382638 2:-14991708 None:intergenic
AATGTTCTTGTTAGGGATGA+TGG 0.383801 2:+14992652 MsaT007207.1:CDS
GAGCCTTTAAGAAAGAATAC+TGG 0.390255 2:+14992757 MsaT007207.1:CDS
GCTCGCTCTATGTCGTTTGT+TGG 0.402421 2:+14992961 MsaT007207.1:CDS
GCGGTTGATTGGTGGACTTA+TGG 0.403878 2:+14993036 MsaT007207.1:CDS
GCCAGAAAATGTTCTTGTTA+GGG 0.404235 2:+14992645 MsaT007207.1:CDS
TTTGGCAAAACTCCGTTTAA+GGG 0.411556 2:+14993081 MsaT007207.1:CDS
CACCTCAGGTGTTTGAATCC+CGG 0.414291 2:-14990888 None:intergenic
AAAACTCCGTTTAAGGGATC+CGG 0.419047 2:+14993087 MsaT007207.1:CDS
ATTTATGAAAGTAAGAAGTA+TGG 0.426877 2:+14991016 MsaT007207.1:CDS
TCAAAATGAGTGTACAAAGT+TGG 0.430217 2:-14991634 None:intergenic
AGAACTAGAGATGGAGCATT+GGG 0.430335 2:+14991418 MsaT007207.1:CDS
CAAAATGAGTGTACAAAGTT+GGG 0.433137 2:-14991633 None:intergenic
CGGAAGGCCAAAACCGAACT+TGG 0.435753 2:+14992892 MsaT007207.1:CDS
CTCATGTCATTTGCTTTGTG+AGG 0.438367 2:-14991373 None:intergenic
GTATGGTGTTCCGTCTCAAA+AGG 0.447239 2:+14991033 MsaT007207.1:CDS
TCGCTGTCGCTTCAAAAGAC+AGG 0.447517 2:+14990929 MsaT007207.1:CDS
TGCTCAGGAAAATGCTTCCC+TGG 0.448183 2:-14991730 None:intergenic
GTCACGGCAGTGCGGTTGAT+TGG 0.448373 2:+14993025 MsaT007207.1:CDS
TGTACAAAGTTGGGAGAAAC+GGG 0.451051 2:-14991624 None:intergenic
AAACAACATCAGAAAACATC+CGG 0.452232 2:+14990869 MsaT007207.1:CDS
GATTCACTGAGTAGTAAATT+CGG 0.452525 2:+14991067 MsaT007207.1:CDS
TCGCCGGCAGACGATGCAGC+TGG 0.454396 2:-14993360 None:intergenic
ACGGACTTAGACAAATCTTC+AGG 0.455351 2:-14990962 None:intergenic
ACTTCGTGCTCAGACGGAAC+GGG 0.456728 2:+14991579 MsaT007207.1:CDS
CTTCAGACTTCTGAAGAGAC+TGG 0.457642 2:+14991450 MsaT007207.1:CDS
TCAACAGCCTTTGGAATCTC+AGG 0.460268 2:-14993318 None:intergenic
TGCATCGTCTGCCGGCGATA+AGG 0.461635 2:+14993365 MsaT007207.1:CDS
ACTGACTTGATTGCCAAGTT+CGG 0.462315 2:-14992905 None:intergenic
AACTTGAGGTCTTTCACCTC+AGG 0.463670 2:-14990902 None:intergenic
AAAGGGATGTTGTTTAATCT+CGG 0.474175 2:-14993253 None:intergenic
CCTTGATTATTTCAGGTGCC+AGG 0.475279 2:-14992996 None:intergenic
GTGTACAAAGTTGGGAGAAA+CGG 0.475511 2:-14991625 None:intergenic
AACACGTCAAAGCAGAATAT+CGG 0.476349 2:+14990989 MsaT007207.1:CDS
CAATCGACGAGGATTTAACT+AGG 0.477213 2:-14992729 None:intergenic
GACGAGGATTTAACTAGGGT+TGG 0.480552 2:-14992724 None:intergenic
CATCTCTAGTTCTAACCACT+TGG 0.482980 2:-14991408 None:intergenic
TGCCAAACAACAACTCATAT+AGG 0.483483 2:-14993065 None:intergenic
TATCAGGGGTTTGCTTGTAA+AGG 0.485912 2:+14993194 MsaT007207.1:CDS
TGTTGGAACTCACGAATACC+TGG 0.486226 2:+14992978 MsaT007207.1:CDS
CTTCTGAAGAGACTGGGTTG+TGG 0.488392 2:+14991457 MsaT007207.1:CDS
TGTTGTTAGCTTTGCAGCAA+GGG 0.490807 2:+14993167 MsaT007207.1:CDS
CTTGCTGCAAAGCTAACAAC+AGG 0.490974 2:-14993165 None:intergenic
CGCCGGCAGACGATGCAGCT+GGG 0.491941 2:-14993359 None:intergenic
ACAAAGCAAATGACATGAGA+TGG 0.494288 2:+14991377 MsaT007207.1:CDS
TTACGTGGCAGAGGTCCTAC+TGG 0.495600 2:+14992576 MsaT007207.1:CDS
AAAGGAACCTCAGCACAGAT+TGG 0.496667 2:+14993212 MsaT007207.1:CDS
CGGTTCCCGGATCCCTTAAA+CGG 0.499894 2:-14993093 None:intergenic
AACACAGGATGGCTGAATGC+AGG 0.500266 2:-14992815 None:intergenic
CTTGGTGATGGAATTCTGCC+CGG 0.502089 2:+14991675 MsaT007207.1:CDS
CGACATAGAGCGAGCGTCGG+TGG 0.502191 2:-14992953 None:intergenic
TACTTCGTGCTCAGACGGAA+CGG 0.503057 2:+14991578 MsaT007207.1:CDS
CCTGGCACCTGAAATAATCA+AGG 0.503319 2:+14992996 MsaT007207.1:CDS
ACGGCAGTGCGGTTGATTGG+TGG 0.508091 2:+14993028 MsaT007207.1:CDS
ACTTGTCTTCGCAATACTGC+TGG 0.510223 2:-14991221 None:intergenic
ACATACTTCACTGCCTGCTC+AGG 0.512459 2:-14991745 None:intergenic
TTGATTTGCTAGAAAAGAGC+CGG 0.515314 2:-14992861 None:intergenic
GTGGGCTCTGCAATGAGCTC+AGG 0.515916 2:-14992934 None:intergenic
CGCTGTCGCTTCAAAAGACA+GGG 0.521858 2:+14990930 MsaT007207.1:CDS
CACAGATTGGCTTATAAAAG+AGG 0.523225 2:+14993225 MsaT007207.1:CDS
TCCCCAGCTGCATCGTCTGC+CGG 0.524116 2:+14993357 MsaT007207.1:CDS
GACATAGAGCGAGCGTCGGT+GGG 0.525943 2:-14992952 None:intergenic
CAATGAAAGTGATGGACAAA+GGG 0.527725 2:+14991533 MsaT007207.1:CDS
TGCAGCAAGGGATCTTATCA+GGG 0.528637 2:+14993179 MsaT007207.1:CDS
TTGGTGATGGAATTCTGCCC+GGG 0.536932 2:+14991676 MsaT007207.1:CDS
TGGAGTACCTACACATGCTC+GGG 0.541979 2:+14992602 MsaT007207.1:CDS
ATGTTGTTTAGAGAGAGATC+TGG 0.543721 2:-14990855 None:intergenic
GGCAGAGGTCCTACTGGCAA+TGG 0.545465 2:+14992582 MsaT007207.1:CDS
GTGGAGACCTCCATACTCTT+CGG 0.546582 2:+14991698 MsaT007207.1:CDS
CTGTTGTTAGCTTTGCAGCA+AGG 0.548555 2:+14993166 MsaT007207.1:CDS
AGCAGTATTGCGAAGACAAG+TGG 0.550813 2:+14991223 MsaT007207.1:CDS
GCAGACGATGCAGCTGGGGA+AGG 0.551197 2:-14993354 None:intergenic
TGGTGTAGCACATCGGATCA+AGG 0.554118 2:-14993295 None:intergenic
TGATTTGCTAGAAAAGAGCC+GGG 0.554220 2:-14992860 None:intergenic
TAGAACTAGAGATGGAGCAT+TGG 0.559898 2:+14991417 MsaT007207.1:CDS
TAACAGCACATCGGAGGGAA+AGG 0.559978 2:-14992699 None:intergenic
ATGGAGTACCTACACATGCT+CGG 0.560351 2:+14992601 MsaT007207.1:CDS
AAACTCCGTTTAAGGGATCC+GGG 0.560479 2:+14993088 MsaT007207.1:CDS
ACTCTTCGGCAGAAACAACC+AGG 0.561509 2:+14991712 MsaT007207.1:CDS
GTCTCTTCAGAAGTCTGAAG+TGG 0.563517 2:-14991447 None:intergenic
TCTAGAAGAAATCAAACTCC+AGG 0.567164 2:-14993440 None:intergenic
CAAGTGGTTAGAACTAGAGA+TGG 0.567555 2:+14991409 MsaT007207.1:CDS
TCAACAGCTCCTAATCAGAA+AGG 0.568102 2:+14993405 MsaT007207.1:CDS
CTAGCAAATCAAAGAAAGAA+CGG 0.571358 2:+14992872 MsaT007207.1:CDS
TTCAGACTTCTGAAGAGACT+GGG 0.571581 2:+14991451 MsaT007207.1:CDS
TTATAAGCCAATCTGTGCTG+AGG 0.571793 2:-14993219 None:intergenic
GTTAACAACGGCCTTATCGC+CGG 0.574112 2:-14993376 None:intergenic
AGAGTATGGAGGTCTCCACC+CGG 0.575060 2:-14991694 None:intergenic
CAAAGCAAATGACATGAGAT+GGG 0.575298 2:+14991378 MsaT007207.1:CDS
CACTCTCAACAAAATCAGCT+CGG 0.581324 2:-14991264 None:intergenic
TCTGCAATGAGCTCAGGTAG+AGG 0.583676 2:-14992928 None:intergenic
CACATTAACAACGGATGAGG+AGG 0.583759 2:-14991098 None:intergenic
GAAAGGTTCTGACAATTACC+TGG 0.585823 2:+14993422 MsaT007207.1:CDS
TATGGTGTTCCGTCTCAAAA+GGG 0.589404 2:+14991034 MsaT007207.1:CDS
GCCGGCAGACGATGCAGCTG+GGG 0.589917 2:-14993358 None:intergenic
GAAGTTACTTCGTGCTCAGA+CGG 0.590225 2:+14991573 MsaT007207.1:CDS
ATAATCAAGGGTGAAGGTCA+CGG 0.590685 2:+14993009 MsaT007207.1:CDS
TTACTTCGCAATGAAAGTGA+TGG 0.590768 2:+14991525 MsaT007207.1:CDS
CCACGTTAAACAGCGTGGCT+CGG 0.596480 2:-14993113 None:intergenic
AATCGACGAGGATTTAACTA+GGG 0.601531 2:-14992728 None:intergenic
GCAATGAAAGTGATGGACAA+AGG 0.604126 2:+14991532 MsaT007207.1:CDS
CAAATCAAAGAAAGAACGGA+AGG 0.607512 2:+14992876 MsaT007207.1:CDS
TCGGAGGGAAAGGTCAAAGT+CGG 0.614831 2:-14992689 None:intergenic
GATGGCGGCTCAATACATGC+AGG 0.614996 2:-14992793 None:intergenic
GTTTCTGCGAAAGCTAGCGA+TGG 0.621392 2:+14991196 MsaT007207.1:CDS
ACAGCCTTTGGAATCTCAGG+TGG 0.625096 2:-14993315 None:intergenic
GATGGCTGAATGCAGGATGG+CGG 0.628761 2:-14992808 None:intergenic
GTTCACATTAACAACGGATG+AGG 0.630739 2:-14991101 None:intergenic
GCAGCAAGGGATCTTATCAG+GGG 0.631769 2:+14993180 MsaT007207.1:CDS
TCCGTTGTTAATGTGAACAC+AGG 0.632113 2:+14991106 MsaT007207.1:CDS
AACAACATCAGAAAACATCC+GGG 0.634932 2:+14990870 MsaT007207.1:CDS
TTGGACTAACAGCACATCGG+AGG 0.636981 2:-14992705 None:intergenic
CCTGAAATAATCAAGGGTGA+AGG 0.637156 2:+14993003 MsaT007207.1:CDS
GAGTATGGAGGTCTCCACCC+GGG 0.638079 2:-14991693 None:intergenic
CAGGATGGCTGAATGCAGGA+TGG 0.639669 2:-14992811 None:intergenic
GTTTCTGCCGAAGAGTATGG+AGG 0.641137 2:-14991705 None:intergenic
ACATGAGGTAGGAGCAACAC+AGG 0.641339 2:-14992830 None:intergenic
TGGACTAACAGCACATCGGA+GGG 0.642645 2:-14992704 None:intergenic
ATACAATCCCGAGCATGTGT+AGG 0.645724 2:-14992609 None:intergenic
GTTTACTTATCTGAGTTGAG+TGG 0.646542 2:+14991493 MsaT007207.1:CDS
GAGGTAGGAGCAACACAGGA+TGG 0.647072 2:-14992826 None:intergenic
GGTAAGAGCAGTATTTGCAG+AGG 0.647607 2:+14991286 MsaT007207.1:CDS
GCGACAGCGAAGAAAACTTG+AGG 0.651781 2:-14990916 None:intergenic
GATTAGGAGCTGTTGACATG+TGG 0.656301 2:-14993398 None:intergenic
CCGAGCCACGCTGTTTAACG+TGG 0.665030 2:+14993113 MsaT007207.1:CDS
CTGGCACCTGAAATAATCAA+GGG 0.668108 2:+14992997 MsaT007207.1:CDS
TCTCAGGTGGTGTAGCACAT+CGG 0.670407 2:-14993302 None:intergenic
GCCTGTGTTCACATTAACAA+CGG 0.677022 2:-14991107 None:intergenic
GTGATGGAATTCTGCCCGGG+TGG 0.679002 2:+14991679 MsaT007207.1:CDS
TACACCACCTGAGATTCCAA+AGG 0.680244 2:+14993311 MsaT007207.1:CDS
TGTTGACATGTGGTTAACAA+CGG 0.685367 2:-14993388 None:intergenic
GTAGGTACTCCATTGCCAGT+AGG 0.691601 2:-14992591 None:intergenic
ACCTACCACGTTAAACAGCG+TGG 0.699605 2:-14993118 None:intergenic
ATCCGGGATTCAAACACCTG+AGG 0.700119 2:+14990886 MsaT007207.1:CDS
GCCACGCTGTTTAACGTGGT+AGG 0.708033 2:+14993117 MsaT007207.1:CDS
AAACGACATAGAGCGAGCGT+CGG 0.711674 2:-14992956 None:intergenic
GGGTGAAGGTCACGGCAGTG+CGG 0.717510 2:+14993017 MsaT007207.1:CDS
CTCTTCGGCAGAAACAACCA+GGG 0.726242 2:+14991713 MsaT007207.1:CDS
ACAAAGTTGGGAGAAACGGG+TGG 0.730084 2:-14991621 None:intergenic
GGGTTGGACTAACAGCACAT+CGG 0.739435 2:-14992708 None:intergenic
GATTTGCTAGAAAAGAGCCG+GGG 0.742700 2:-14992859 None:intergenic
AGGCTCTGAATCAATCGACG+AGG 0.745997 2:-14992740 None:intergenic
GAGATGGGAAGCTATCCAAG+TGG 0.758068 2:+14991393 MsaT007207.1:CDS
GGTGCTTCTGGAAATCGCAG+CGG 0.758291 2:-14993144 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr2 gene 14990836 14993461 14990836 ID=MsaG007207
Chr2 mRNA 14990836 14993461 14990836 ID=MsaT007207.1;Parent=MsaG007207
Chr2 exon 14990836 14991761 14990836 ID=MsaT007207.1.exon1;Parent=MsaT007207.1
Chr2 CDS 14990836 14991761 14990836 ID=cds.MsaT007207.1;Parent=MsaT007207.1
Chr2 exon 14992573 14993461 14992573 ID=MsaT007207.1.exon2;Parent=MsaT007207.1
Chr2 CDS 14992573 14993461 14992573 ID=cds.MsaT007207.1;Parent=MsaT007207.1
Gene Sequence

>MsaT007207.1

ATGGACTCGAAAACTAGTGCCAGATCTCTCTCTAAACAACATCAGAAAACATCCGGGATTCAAACACCTGAGGTGAAAGACCTCAAGTTTTCTTCGCTGTCGCTTCAAAAGACAGGGAAATCTGAGCCTGAAGATTTGTCTAAGTCCGTACAAAACACGTCAAAGCAGAATATCGGCGAAATTTATGAAAGTAAGAAGTATGGTGTTCCGTCTCAAAAGGGTTCTTCTGCTGATTCACTGAGTAGTAAATTCGGTTCTGGTGCCTCCTCATCCGTTGTTAATGTGAACACAGGCTCACAAGAAAGCTCTATCGATCAAGACAAAAAGACTTCAGAATATGGAAGTGTGAAAAACAGTTCTGTTTCTGCGAAAGCTAGCGATGGTGCCAGCAGTATTGCGAAGACAAGTGGAAGTGCTAAGATCAGTGACCGAGCTGATTTTGTTGAGAGTGGTAAGAGCAGTATTTGCAGAGGAAGTACAAGCAGCGATGTGAGTGATGAGAGTACTTGTAGTAGCTTTAGTAGCAGCGTAAACAAGCCTCACAAAGCAAATGACATGAGATGGGAAGCTATCCAAGTGGTTAGAACTAGAGATGGAGCATTGGGTTTAGGCCACTTCAGACTTCTGAAGAGACTGGGTTGTGGAGATATTGGCAGCGTTTACTTATCTGAGTTGAGTGGAACTAAATGTTACTTCGCAATGAAAGTGATGGACAAAGGGTCTTTAGCAAGTCGTAAGAAGTTACTTCGTGCTCAGACGGAACGGGAAATTCTTCAGTCACTTGACCACCCGTTTCTCCCAACTTTGTACACTCATTTTGAGACGGAGAAATTTTCGTGCTTGGTGATGGAATTCTGCCCGGGTGGAGACCTCCATACTCTTCGGCAGAAACAACCAGGGAAGCATTTTCCTGAGCAGGCAGTGAAATTTTACGTGGCAGAGGTCCTACTGGCAATGGAGTACCTACACATGCTCGGGATTGTATACCGTGATCTTAAGCCAGAAAATGTTCTTGTTAGGGATGATGGACATATTATGCTCTCCGACTTTGACCTTTCCCTCCGATGTGCTGTTAGTCCAACCCTAGTTAAATCCTCGTCGATTGATTCAGAGCCTTTAAGAAAGAATACTGGTTACTGTGCTCAGCCTGCATGTATTGAGCCGCCATCCTGCATTCAGCCATCCTGTGTTGCTCCTACCTCATGTTTTTCACCCCGGCTCTTTTCTAGCAAATCAAAGAAAGAACGGAAGGCCAAAACCGAACTTGGCAATCAAGTCAGTCCTCTACCTGAGCTCATTGCAGAGCCCACCGACGCTCGCTCTATGTCGTTTGTTGGAACTCACGAATACCTGGCACCTGAAATAATCAAGGGTGAAGGTCACGGCAGTGCGGTTGATTGGTGGACTTATGGAATCTTCCTATATGAGTTGTTGTTTGGCAAAACTCCGTTTAAGGGATCCGGGAACCGAGCCACGCTGTTTAACGTGGTAGGTCAGCCGCTGCGATTTCCAGAAGCACCTGTTGTTAGCTTTGCAGCAAGGGATCTTATCAGGGGTTTGCTTGTAAAGGAACCTCAGCACAGATTGGCTTATAAAAGAGGCGCAACCGAGATTAAACAACATCCCTTTTTTGAAGGCGTGAATTGGGCCTTGATCCGATGTGCTACACCACCTGAGATTCCAAAGGCTGTTGAGTTTGAGAAGATACCTTCCCCAGCTGCATCGTCTGCCGGCGATAAGGCCGTTGTTAACCACATGTCAACAGCTCCTAATCAGAAAGGTTCTGACAATTACCTGGAGTTTGATTTCTTCTAG
Protein sequence

>MsaT007207.1

MDSKTSARSLSKQHQKTSGIQTPEVKDLKFSSLSLQKTGKSEPEDLSKSVQNTSKQNIGEIYESKKYGVPSQKGSSADSLSSKFGSGASSSVVNVNTGSQESSIDQDKKTSEYGSVKNSSVSAKASDGASSIAKTSGSAKISDRADFVESGKSSICRGSTSSDVSDESTCSSFSSSVNKPHKANDMRWEAIQVVRTRDGALGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLAMEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSSIDSEPLRKNTGYCAQPACIEPPSCIQPSCVAPTSCFSPRLFSSKSKKERKAKTELGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTYGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEKIPSPAASSAGDKAVVNHMSTAPNQKGSDNYLEFDFF*