AlfalfaGEDB | MsaG007400

M. sativa ssp. caerulea / MsaG007400

KEGG: K08064
GO: GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0040034 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
PFAM: PF02045.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007400	XP_003594522.1	98.551	207	3	0	1	207	1	207	2.79e-149	423

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007400	sp\|Q84JP1\|NFYA7_ARATH	54.146	205	73	7	1	203	1	186	3.87e-64	199

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007400	tr\|G7IKU2\|G7IKU2_MEDTR	98.551	207	3	0	1	207	1	207	1.33e-149	423

TFs/TRs:

Gene ID	Type	Classification
MsaG007400	TF	NF-YA

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000024	MsaG007400	0.872213	7.745871e-67	9.863642e-64
MsaG000193	MsaG007400	0.807128	9.983249e-50	1.591099e-47
MsaG000281	MsaG007400	0.880424	1.173580e-69	2.160480e-66
MsaG000288	MsaG007400	0.825703	7.206269e-54	1.848323e-51
MsaG000386	MsaG007400	0.802227	1.040866e-48	1.480114e-46
MsaG000382	MsaG007400	0.827756	2.344897e-54	6.368709e-52
MsaG000405	MsaG007400	0.876275	3.307035e-68	5.034161e-65
MsaG000619	MsaG007400	0.810035	2.406445e-50	4.113050e-48
MsaG000622	MsaG007400	0.865054	1.558392e-64	1.475522e-61
MsaG001086	MsaG007400	0.826465	4.760112e-54	1.247068e-51
MsaG001200	MsaG007400	0.864178	2.920763e-64	2.670575e-61
MsaG001238	MsaG007400	0.831331	3.198541e-55	9.617172e-53
MsaG001859	MsaG007400	0.800343	2.519809e-48	3.433379e-46
MsaG001970	MsaG007400	0.804498	3.541852e-49	5.307535e-47
MsaG002013	MsaG007400	0.825372	8.629305e-54	2.193010e-51
MsaG002628	MsaG007400	0.804987	2.802568e-49	4.247644e-47
MsaG002973	MsaG007400	0.801072	1.791887e-48	2.481985e-46
MsaG003210	MsaG007400	0.805910	1.798643e-49	2.785341e-47
MsaG003187	MsaG007400	0.885566	1.570756e-71	3.698202e-68
MsaG003200	MsaG007400	0.804001	4.490823e-49	6.652435e-47
MsaG003201	MsaG007400	0.800966	1.882474e-48	2.601307e-46
MsaG003202	MsaG007400	0.826158	5.627518e-54	1.461752e-51
MsaG003203	MsaG007400	0.801212	1.677536e-48	2.331009e-46
MsaG003239	MsaG007400	0.807323	9.081785e-50	1.454126e-47
MsaG003315	MsaG007400	0.804004	4.484153e-49	6.643139e-47
MsaG003821	MsaG007400	0.832439	1.708820e-55	5.306670e-53
MsaG004105	MsaG007400	0.813036	5.398360e-51	9.933839e-49
MsaG004178	MsaG007400	0.852652	7.694030e-61	4.572824e-58
MsaG004204	MsaG007400	0.879293	2.951941e-69	5.157170e-66
MsaG004462	MsaG007400	0.839687	2.519527e-57	9.739832e-55
MsaG004504	MsaG007400	0.890698	1.716587e-73	5.247402e-70
MsaG004998	MsaG007400	0.864596	2.165432e-64	2.013033e-61
MsaG005000	MsaG007400	0.824971	1.071881e-53	2.694207e-51
MsaG005119	MsaG007400	0.844456	1.398767e-58	6.295583e-56
MsaG005373	MsaG007400	0.802312	1.000279e-48	1.425197e-46
MsaG005329	MsaG007400	0.804050	4.385347e-49	6.503964e-47
MsaG005401	MsaG007400	0.835387	3.152018e-56	1.068116e-53
MsaG005442	MsaG007400	0.880301	1.298476e-69	2.376339e-66
MsaG005443	MsaG007400	0.866350	6.103676e-65	6.086533e-62
MsaG005444	MsaG007400	0.870751	2.348091e-66	2.808401e-63
MsaG005537	MsaG007400	0.814694	2.336889e-51	4.482654e-49
MsaG005506	MsaG007400	0.834433	5.466933e-56	1.800505e-53
MsaG005508	MsaG007400	0.831958	2.244903e-55	6.875070e-53
MsaG005705	MsaG007400	0.824782	1.187576e-53	2.969602e-51
MsaG005864	MsaG007400	0.865763	9.344601e-65	9.101464e-62
MsaG006014	MsaG007400	0.890497	2.057226e-73	6.222548e-70
MsaG006029	MsaG007400	0.864200	2.874878e-64	2.630897e-61
MsaG006175	MsaG007400	0.839852	2.284108e-57	8.875465e-55
MsaG006204	MsaG007400	0.806645	1.261825e-49	1.988303e-47
MsaG006237	MsaG007400	0.829223	1.040915e-54	2.945904e-52
MsaG006926	MsaG007400	0.830400	5.398528e-55	1.580365e-52
MsaG007287	MsaG007400	0.815953	1.230764e-51	2.437333e-49
MsaG007353	MsaG007400	0.834565	5.066927e-56	1.675302e-53
MsaG007400	MsaG007798	0.864228	2.817545e-64	2.581287e-61
MsaG007400	MsaG008324	0.844028	1.820996e-58	8.081112e-56
MsaG007400	MsaG008552	0.804510	3.521937e-49	5.279046e-47
MsaG007400	MsaG008881	0.812261	7.963904e-51	1.437395e-48
MsaG007400	MsaG009138	0.850877	2.437572e-60	1.361705e-57
MsaG007400	MsaG009390	0.865239	1.363754e-64	1.300966e-61
MsaG007400	MsaG009501	0.842615	4.321010e-58	1.832700e-55
MsaG007400	MsaG009504	0.824156	1.664206e-53	4.090915e-51
MsaG007400	MsaG009701	0.833986	7.067551e-56	2.296646e-53
MsaG007400	MsaG010263	0.893334	1.543996e-74	5.432051e-71
MsaG007400	MsaG010538	0.817027	7.092796e-52	1.443841e-49
MsaG007400	MsaG010541	0.856508	5.960315e-62	4.068012e-59
MsaG007400	MsaG010533	0.817161	6.619300e-52	1.352112e-49
MsaG007400	MsaG010835	0.837126	1.144662e-56	4.087355e-54
MsaG007400	MsaG010877	0.868083	1.715709e-65	1.836412e-62
MsaG007400	MsaG010879	0.858210	1.880884e-62	1.366922e-59
MsaG007400	MsaG011357	0.800953	1.894739e-48	2.617447e-46
MsaG007400	MsaG011509	0.842264	5.347749e-58	2.242615e-55
MsaG007400	MsaG011607	0.823277	2.666839e-53	6.401488e-51
MsaG007400	MsaG011806	0.870486	2.866145e-66	3.389544e-63
MsaG007400	MsaG012138	0.821450	7.051853e-53	1.611606e-50
MsaG007400	MsaG012139	0.867752	2.189541e-65	2.312045e-62
MsaG007400	MsaG012140	0.859556	7.476016e-63	5.714989e-60
MsaG007400	MsaG012187	0.872881	4.644047e-67	6.086652e-64
MsaG007400	MsaG012342	0.823814	2.000242e-53	4.871766e-51
MsaG007400	MsaG012304	0.884537	3.786815e-71	8.479614e-68
MsaG007400	MsaG012382	0.800689	2.143086e-48	2.943159e-46
MsaG007400	MsaG012448	0.845778	6.171499e-59	2.901407e-56
MsaG007400	MsaG012555	0.815022	1.978514e-51	3.826769e-49
MsaG007400	MsaG013143	0.847220	2.504421e-59	1.235527e-56
MsaG007400	MsaG013184	0.829304	9.950797e-55	2.822865e-52
MsaG007400	MsaG013325	0.909679	1.052298e-81	9.730556e-78
MsaG007400	MsaG013441	0.802002	1.157444e-48	1.637433e-46
MsaG007400	MsaG013962	0.820749	1.021039e-52	2.290507e-50
MsaG007400	MsaG014732	0.820474	1.179679e-52	2.627350e-50
MsaG007400	MsaG014810	0.824713	1.232269e-53	3.075511e-51
MsaG007400	MsaG015082	0.831356	3.153809e-55	9.489632e-53
MsaG007400	MsaG015216	0.841494	8.523767e-58	3.487883e-55
MsaG007400	MsaG015202	0.899502	4.267483e-77	2.120050e-73
MsaG007400	MsaG015311	0.889770	3.949052e-73	1.150199e-69
MsaG007400	MsaG016544	0.822802	3.438848e-53	8.149103e-51
MsaG007400	MsaG016650	0.849882	4.622358e-60	2.494948e-57
MsaG007400	MsaG016651	0.879491	2.512475e-69	4.429914e-66
MsaG007400	MsaG017058	0.810256	2.158309e-50	3.708857e-48
MsaG007400	MsaG017133	0.826784	3.998168e-54	1.056703e-51
MsaG007400	MsaG017209	0.830989	3.877253e-55	1.154352e-52
MsaG007400	MsaG017691	0.858702	1.344411e-62	9.950925e-60
MsaG007400	MsaG018123	0.810167	2.254904e-50	3.866383e-48
MsaG007400	MsaG018134	0.875204	7.677833e-68	1.114107e-64
MsaG007400	MsaG018225	0.855628	1.075095e-61	7.105635e-59
MsaG007400	MsaG018455	0.816082	1.151875e-51	2.288588e-49
MsaG007400	MsaG018519	0.815028	1.972155e-51	3.815074e-49
MsaG007400	MsaG018529	0.816411	9.735186e-52	1.950468e-49
MsaG007400	MsaG018741	0.829182	1.065180e-54	3.011118e-52
MsaG007400	MsaG018813	0.820870	9.578097e-53	2.155611e-50
MsaG007400	MsaG018909	0.826881	3.791323e-54	1.004782e-51
MsaG007400	MsaG019235	0.811713	1.047204e-50	1.864773e-48
MsaG007400	MsaG019361	0.849660	5.331040e-60	2.856151e-57
MsaG007400	MsaG019607	0.820855	9.657267e-53	2.172448e-50
MsaG007400	MsaG019639	0.828235	1.799757e-54	4.954209e-52
MsaG007400	MsaG020029	0.834171	6.355929e-56	2.076821e-53
MsaG007400	MsaG020290	0.869333	6.791026e-66	7.652808e-63
MsaG007400	MsaG020347	0.859054	1.056159e-62	7.922147e-60
MsaG007400	MsaG020540	0.810344	2.065914e-50	3.557837e-48
MsaG007400	MsaG020968	0.806530	1.333448e-49	2.095536e-47
MsaG007400	MsaG021249	0.833660	8.517438e-56	2.741571e-53
MsaG007400	MsaG021286	0.841168	1.037202e-57	4.200774e-55
MsaG007400	MsaG021863	0.806592	1.294446e-49	2.037224e-47
MsaG007400	MsaG021997	0.853600	4.131766e-61	2.539046e-58
MsaG007400	MsaG022044	0.848697	9.848688e-60	5.105636e-57
MsaG007400	MsaG022100	0.800913	1.930411e-48	2.664296e-46
MsaG007400	MsaG022714	0.848450	1.151613e-59	5.920021e-57
MsaG007400	MsaG023220	0.815553	1.510024e-51	2.960107e-49
MsaG007400	MsaG023271	0.870785	2.287388e-66	2.739956e-63
MsaG007400	MsaG023808	0.824035	1.775727e-53	4.350956e-51
MsaG007400	MsaG023886	0.827241	3.110922e-54	8.328012e-52
MsaG007400	MsaG023890	0.840938	1.191587e-57	4.790680e-55
MsaG007400	MsaG023971	0.900872	1.094610e-77	5.895410e-74
MsaG007400	MsaG025484	0.835780	2.509235e-56	8.603582e-54
MsaG007400	MsaG025575	0.803640	5.331817e-49	7.832264e-47
MsaG007400	MsaG026262	0.800910	1.932780e-48	2.667423e-46
MsaG007400	MsaG026721	0.806367	1.443140e-49	2.259146e-47
MsaG007400	MsaG026714	0.876184	3.553938e-68	5.388401e-65
MsaG007400	MsaG026863	0.809893	2.581184e-50	4.396616e-48
MsaG007400	MsaG026902	0.807361	8.915159e-50	1.428749e-47
MsaG007400	MsaG026970	0.841031	1.126448e-57	4.542419e-55
MsaG007400	MsaG027039	0.853293	5.054030e-61	3.072411e-58
MsaG007400	MsaG027315	0.825435	8.337061e-54	2.122399e-51
MsaG007400	MsaG027524	0.867989	1.839445e-65	1.961155e-62
MsaG007400	MsaG027521	0.840119	1.946545e-57	7.627269e-55
MsaG007400	MsaG027568	0.824929	1.096660e-53	2.753400e-51
MsaG007400	MsaG027653	0.832325	1.822966e-55	5.642393e-53
MsaG007400	MsaG027933	0.839054	3.672933e-57	1.392067e-54
MsaG007400	MsaG028034	0.830832	4.236386e-55	1.255563e-52
MsaG007400	MsaG028416	0.851853	1.295802e-60	7.488369e-58
MsaG007400	MsaG028716	0.839641	2.590337e-57	9.998342e-55
MsaG007400	MsaG028758	0.807244	9.437401e-50	1.508192e-47
MsaG007400	MsaG028951	0.827668	2.460486e-54	6.666022e-52
MsaG007400	MsaG029327	0.801723	1.319718e-48	1.855227e-46
MsaG007400	MsaG029887	0.810911	1.559962e-50	2.723816e-48
MsaG007400	MsaG030083	0.841593	8.027916e-58	3.295330e-55
MsaG007400	MsaG030084	0.818969	2.594752e-52	5.553994e-50
MsaG007400	MsaG030313	0.875550	5.854178e-68	8.626628e-65
MsaG007400	MsaG030332	0.808307	5.623438e-50	9.219091e-48
MsaG007400	MsaG030400	0.871892	9.891753e-67	1.242605e-63
MsaG007400	MsaG030401	0.883571	8.578255e-71	1.833782e-67
MsaG007400	MsaG030402	0.880613	1.005581e-69	1.867833e-66
MsaG007400	MsaG030507	0.817650	5.144270e-52	1.064038e-49
MsaG007400	MsaG030634	0.844508	1.355171e-58	6.109575e-56
MsaG007400	MsaG031236	0.855319	1.322047e-61	8.639961e-59
MsaG007400	MsaG031366	0.835681	2.658276e-56	9.087400e-54
MsaG007400	MsaG031735	0.834391	5.602088e-56	1.842634e-53
MsaG007400	MsaG032068	0.829819	7.471004e-55	2.150958e-52
MsaG007400	MsaG032786	0.858674	1.369600e-62	1.012752e-59
MsaG007400	MsaG033014	0.867150	3.405842e-65	3.509025e-62
MsaG007400	MsaG033222	0.802299	1.006362e-48	1.433432e-46
MsaG007400	MsaG033400	0.808521	5.065610e-50	8.347511e-48
MsaG007400	MsaG033698	0.817097	6.842358e-52	1.395355e-49
MsaG007400	MsaG034079	0.827805	2.282240e-54	6.207098e-52
MsaG007400	MsaG034207	0.830747	4.443963e-55	1.313848e-52
MsaG007400	MsaG034148	0.891190	1.100662e-73	3.451715e-70
MsaG007400	MsaG034827	0.844244	1.593804e-58	7.124152e-56
MsaG007400	MsaG034828	0.855583	1.107977e-61	7.311089e-59
MsaG007400	MsaG034829	0.839827	2.317899e-57	8.999737e-55
MsaG007400	MsaG035148	0.814059	3.224911e-51	6.088149e-49
MsaG007400	MsaG035935	0.872822	4.862317e-67	6.355802e-64
MsaG007400	MsaG036047	0.840169	1.889620e-57	7.415687e-55
MsaG007400	MsaG036377	0.814438	2.660760e-51	5.071353e-49
MsaG007400	MsaG037009	0.848500	1.115647e-59	5.744878e-57
MsaG007400	MsaG040053	0.816375	9.916559e-52	1.985027e-49
MsaG007400	MsaG040582	0.835510	2.935410e-56	9.984022e-54
MsaG007400	MsaG040586	0.802890	7.609081e-49	1.098576e-46
MsaG007400	MsaG041899	0.830907	4.061247e-55	1.206255e-52
MsaG007400	MsaG041900	0.835454	3.031556e-56	1.029370e-53
MsaG007400	MsaG041901	0.842521	4.573175e-58	1.933931e-55
MsaG007400	MsaG041902	0.828486	1.567183e-54	4.344682e-52
MsaG007400	MsaG041903	0.886949	4.751961e-72	1.198429e-68
MsaG007400	MsaG041904	0.871387	1.451279e-66	1.783707e-63
MsaG007400	MsaG042382	0.821874	5.634216e-53	1.302206e-50
MsaG007400	MsaG043414	0.809626	2.944996e-50	4.983970e-48
MsaG007400	MsaG044218	0.821708	6.151127e-53	1.415475e-50
MsaG007400	MsaG044336	0.802257	1.026499e-48	1.460659e-46
MsaG007400	MsaG044384	0.829586	8.507583e-55	2.433197e-52
MsaG007400	MsaG044386	0.818779	2.863343e-52	6.098367e-50
MsaG007400	MsaG044387	0.811503	1.162684e-50	2.059815e-48
MsaG007400	MsaG044447	0.827254	3.089498e-54	8.273610e-52
MsaG007400	MsaG044547	0.811811	9.969274e-51	1.779597e-48
MsaG007400	MsaG044752	0.871294	1.557887e-66	1.907149e-63
MsaG007400	MsaG044786	0.845628	6.771730e-59	3.168031e-56
MsaG007400	MsaG044885	0.838018	6.778395e-57	2.487405e-54
MsaG007400	MsaG044919	0.801161	1.718379e-48	2.385010e-46
MsaG007400	MsaG045004	0.809367	3.345492e-50	5.626296e-48
MsaG007400	MsaG045072	0.827186	3.207130e-54	8.572158e-52
MsaG007400	MsaG045078	0.832276	1.875071e-55	5.795378e-53
MsaG007400	MsaG045225	0.878447	5.846360e-69	9.819749e-66
MsaG007400	MsaG045300	0.816807	7.944423e-52	1.607978e-49
MsaG007400	MsaG045262	0.801947	1.188008e-48	1.678575e-46
MsaG007400	MsaG045345	0.847097	2.706217e-59	1.329477e-56
MsaG007400	MsaG045337	0.815019	1.981354e-51	3.831984e-49
MsaG007400	MsaG045403	0.858189	1.908542e-62	1.385913e-59
MsaG007400	MsaG045404	0.828511	1.545166e-54	4.286652e-52
MsaG007400	MsaG045409	0.825232	9.308641e-54	2.356525e-51
MsaG007400	MsaG045445	0.860552	3.753715e-63	2.980954e-60
MsaG007400	MsaG045487	0.819697	1.773665e-52	3.869599e-50
MsaG007400	MsaG045576	0.821027	8.817314e-53	1.992760e-50
MsaG007400	MsaG045596	0.800075	2.855067e-48	3.866784e-46
MsaG007400	MsaG045611	0.836366	1.785300e-56	6.230559e-54
MsaG007400	MsaG045973	0.814892	2.113476e-51	4.074435e-49
MsaG007400	MsaG046053	0.805522	2.167886e-49	3.326695e-47
MsaG007400	MsaG046383	0.804642	3.306241e-49	4.970899e-47
MsaG007400	MsaG046807	0.896867	5.533974e-76	2.364707e-72
MsaG007400	MsaG046813	0.850791	2.576834e-60	1.435212e-57
MsaG007400	MsaG046863	0.815185	1.820904e-51	3.536495e-49
MsaG007400	MsaG046862	0.834669	4.772619e-56	1.582973e-53
MsaG007400	MsaG047014	0.855447	1.213549e-61	7.968090e-59
MsaG007400	MsaG047054	0.843439	2.612676e-58	1.137777e-55
MsaG007400	MsaG047095	0.807265	9.343319e-50	1.493882e-47
MsaG007400	MsaG047152	0.836887	1.316631e-56	4.667406e-54
MsaG007400	MsaG002437	0.861348	2.155838e-63	1.764455e-60
MsaG007400	MsaG000067	0.842930	3.564617e-58	1.527189e-55
MsaG007400	MsaG005825	0.807694	7.581673e-50	1.224789e-47
MsaG007400	MsaG000633	0.847963	1.568355e-59	7.932823e-57
MsaG007400	MsaG002583	0.839853	2.282204e-57	8.868419e-55
MsaG007400	MsaG002081	0.860245	4.646022e-63	3.646697e-60
MsaG007400	MsaG007674	0.800790	2.044403e-48	2.813981e-46
MsaG007400	MsaG009037	0.832893	1.320488e-55	4.155357e-53
MsaG007400	MsaG013401	0.817879	4.569898e-52	9.508612e-50
MsaG007400	MsaG014275	0.801119	1.752531e-48	2.430122e-46
MsaG007400	MsaG015507	0.866178	6.915332e-65	6.849530e-62
MsaG007400	MsaG016765	0.873656	2.558345e-67	3.468438e-64
MsaG007400	MsaG018815	0.866112	7.252879e-65	7.164334e-62
MsaG007400	MsaG019866	0.818411	3.468378e-52	7.316387e-50
MsaG007400	MsaG023315	0.824820	1.163436e-53	2.912216e-51
MsaG007400	MsaG027887	0.891032	1.269901e-73	3.948760e-70
MsaG007400	MsaG026411	0.887282	3.556554e-72	9.122091e-69
MsaG007400	MsaG027790	0.851876	1.276573e-60	7.383425e-58
MsaG007400	MsaG026536	0.860767	3.233033e-63	2.588606e-60
MsaG007400	MsaG029571	0.804861	2.977158e-49	4.499104e-47
MsaG007400	MsaG032410	0.840311	1.735341e-57	6.841066e-55
MsaG007400	MsaG030963	0.875630	5.497294e-68	8.129673e-65
MsaG007400	MsaG033149	0.851176	2.009923e-60	1.134397e-57
MsaG007400	MsaG032845	0.825696	7.233921e-54	1.855035e-51
MsaG007400	MsaG031747	0.848213	1.338815e-59	6.828430e-57
MsaG007400	MsaG033148	0.806245	1.530276e-49	2.388715e-47
MsaG007400	MsaG033325	0.849725	5.112524e-60	2.745086e-57
MsaG007400	MsaG030214	0.890467	2.114488e-73	6.385888e-70
MsaG007400	MsaG034183	0.826234	5.399044e-54	1.405313e-51
MsaG007400	MsaG034264	0.840907	1.213847e-57	4.875453e-55
MsaG007400	MsaG037156	0.889070	7.372007e-73	2.070068e-69
MsaG007400	MsaG036665	0.852202	1.032069e-60	6.037876e-58
MsaG007400	MsaG037204	0.883460	9.420132e-71	2.002778e-67
MsaG007400	MsaG039226	0.830521	5.044345e-55	1.481699e-52
MsaG007400	MsaG037372	0.822647	3.734726e-53	8.812922e-51
MsaG007400	MsaG039736	0.841520	8.386897e-58	3.434923e-55
MsaG007400	MsaG039603	0.844883	1.074908e-58	4.907239e-56
MsaG007400	MsaG043458	0.895969	1.304471e-75	5.299075e-72

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007400	MtrunA17_Chr2g0292411	98.551	207	3	0	1	207	1	207	2.57e-153	423
MsaG007400	MtrunA17_Chr3g0103391	51.429	140	52	4	48	184	116	242	8.76e-37	130
MsaG007400	MtrunA17_Chr8g0352251	62.162	111	38	1	86	192	127	237	2.54e-36	128
MsaG007400	MtrunA17_Chr8g0343451	52.381	126	49	3	49	173	110	225	2.09e-35	127
MsaG007400	MtrunA17_Chr2g0329811	43.750	160	82	5	47	199	118	276	6.59e-34	123
MsaG007400	MtrunA17_Chr2g0300261	44.444	144	71	3	62	204	32	167	4.48e-32	116
MsaG007400	MtrunA17_Chr7g0267581	42.138	159	69	5	49	204	122	260	7.71e-30	112
MsaG007400	MtrunA17_Chr1g0177091	43.537	147	59	6	44	186	111	237	2.34e-29	111

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007400	AT1G30500.2	54.146	205	73	7	1	203	1	186	3.93e-65	199
MsaG007400	AT1G30500.1	53.171	205	71	7	1	203	1	182	6.31e-63	194
MsaG007400	AT2G34720.1	50.000	212	83	8	1	206	1	195	3.81e-58	182
MsaG007400	AT2G34720.2	59.060	149	51	4	62	206	18	160	7.41e-54	170
MsaG007400	AT2G34720.3	59.060	149	51	4	62	206	18	160	7.41e-54	170
MsaG007400	AT3G20910.1	45.625	160	73	3	48	204	112	260	2.13e-37	132
MsaG007400	AT5G12840.5	46.108	167	72	4	47	207	118	272	7.27e-37	130
MsaG007400	AT5G12840.3	46.108	167	72	4	47	207	118	272	7.27e-37	130
MsaG007400	AT5G12840.1	46.108	167	72	4	47	207	118	272	7.27e-37	130
MsaG007400	AT5G12840.4	45.509	167	73	4	47	207	117	271	7.99e-37	129
MsaG007400	AT5G12840.2	45.509	167	73	4	47	207	117	271	7.99e-37	129
MsaG007400	AT1G72830.1	47.552	143	56	4	61	192	134	268	3.54e-34	124
MsaG007400	AT1G54160.1	57.843	102	40	2	86	184	148	249	8.19e-33	120
MsaG007400	AT1G72830.2	47.222	144	56	5	61	192	134	269	2.17e-32	119
MsaG007400	AT1G17590.3	50.000	120	46	3	61	179	132	238	9.76e-31	115
MsaG007400	AT1G17590.2	50.000	120	46	3	61	179	132	238	9.76e-31	115
MsaG007400	AT1G17590.4	50.000	120	46	3	61	179	132	238	9.76e-31	115
MsaG007400	AT1G17590.1	50.000	120	46	3	61	179	132	238	9.76e-31	115
MsaG007400	AT3G14020.2	54.808	104	42	2	73	175	134	233	3.43e-29	110
MsaG007400	AT3G14020.1	54.808	104	42	2	73	175	134	233	3.43e-29	110
MsaG007400	AT5G06510.4	40.559	143	61	5	76	203	2	135	9.81e-25	95.9
MsaG007400	AT5G06510.7	40.559	143	61	5	76	203	2	135	9.81e-25	95.9
MsaG007400	AT5G06510.1	46.364	110	46	3	104	203	124	230	2.61e-24	97.1
MsaG007400	AT5G06510.5	46.364	110	46	3	104	203	124	230	2.61e-24	97.1
MsaG007400	AT5G06510.2	46.364	110	46	3	104	203	124	230	2.61e-24	97.1
MsaG007400	AT5G06510.6	46.364	110	46	3	104	203	124	230	2.61e-24	97.1
MsaG007400	AT5G06510.3	46.364	110	46	3	104	203	75	181	2.72e-24	95.9
MsaG007400	AT3G05690.1	42.609	115	42	2	62	172	105	199	3.57e-23	94.7
MsaG007400	AT3G05690.2	42.609	115	42	2	62	172	142	236	8.12e-23	94.4
MsaG007400	AT1G72830.3	54.878	82	27	1	121	192	162	243	3.09e-22	92.4

Find 55 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCAGAATTGAGATTGATAT+TGG	0.249770	2:+17628447	None:intergenic
CCAGGCCAATCTTCAGTTAA+TGG	0.300525	2:-17629371	MsaT007400.1:intron
CGGATAAGGTTGTGCATCAT+AGG	0.313332	2:+17629516	None:intergenic
CTGTAGTAGGGATCCGGATA+TGG	0.349828	2:+17629553	None:intergenic
CCGTAGGGTTGCGGCGGATA+AGG	0.368018	2:+17629502	None:intergenic
GAAATTCCGTTTGCAGATAT+AGG	0.399724	2:+17631343	None:intergenic
AATTCCCATTAACTGAAGAT+TGG	0.417171	2:+17629366	None:intergenic
CTTTCTTTGAATTCAGAAAC+CGG	0.421740	2:+17628515	None:intergenic
AGCAAAGATGCTTCTGTAGT+AGG	0.425029	2:+17629540	None:intergenic
CAGGCCAATCTTCAGTTAAT+GGG	0.435926	2:-17629370	MsaT007400.1:CDS
TGTCGTGATTCATGCAAGTA+TGG	0.440305	2:+17628574	None:intergenic
AAAAGAAAGTTACACGGAAT+CGG	0.459956	2:-17629228	MsaT007400.1:CDS
GCACCTCCACAGCTTGGCAC+GGG	0.466695	2:-17631280	MsaT007400.1:CDS
ACCACCTGCTTATCCATATC+CGG	0.479165	2:-17629566	MsaT007400.1:CDS
CTGAAAAGAGCAAGAGGATG+TGG	0.485801	2:-17628541	MsaT007400.1:CDS
CGCCGGTATTGATAATGCTC+AGG	0.487682	2:-17631317	MsaT007400.1:CDS
GCAAAGATGCTTCTGTAGTA+GGG	0.499527	2:+17629541	None:intergenic
GTCAATGCAAAACAGTATCA+TGG	0.506073	2:-17629292	MsaT007400.1:CDS
ATGCTTCTGTAGTAGGGATC+CGG	0.507422	2:+17629547	None:intergenic
GGATAAGGTTGTGCATCATA+GGG	0.522061	2:+17629517	None:intergenic
GCTTGGCACGGGGCATGCTA+TGG	0.522353	2:-17631269	MsaT007400.1:intron
GGATGTCCACCGTAGGGTTG+CGG	0.523458	2:+17629493	None:intergenic
AGCACCTCCACAGCTTGGCA+CGG	0.523882	2:-17631281	MsaT007400.1:CDS
TTTGCCAACTGATGCAGTTG+AGG	0.525775	2:-17629326	MsaT007400.1:CDS
GCATGCCCCGTGCCAAGCTG+TGG	0.532400	2:+17631274	None:intergenic
GAGCAAGAGGATGTGGAGGC+CGG	0.538187	2:-17628534	MsaT007400.1:CDS
GAGAATCAACAAGATGAGGT+TGG	0.539095	2:-17628490	MsaT007400.1:CDS
CCTTATCCGCCGCAACCCTA+CGG	0.540441	2:-17629502	MsaT007400.1:CDS
TGCCCCGTGCCAAGCTGTGG+AGG	0.541599	2:+17631277	None:intergenic
GGATCCGGATATGGATAAGC+AGG	0.543946	2:+17629562	None:intergenic
GGCTCCTCAACTGCATCAGT+TGG	0.545637	2:+17629322	None:intergenic
AACCTGAGCATTATCAATAC+CGG	0.557780	2:+17631315	None:intergenic
ACCCTACGGTGGACATCCAA+TGG	0.560327	2:-17629488	MsaT007400.1:intron
ATGCAGCCTATATCTGCAAA+CGG	0.566429	2:-17631349	MsaT007400.1:CDS
CACCTCCACAGCTTGGCACG+GGG	0.573071	2:-17631279	MsaT007400.1:CDS
TGTCCAGATAACGAGGCTGA+TGG	0.582397	2:-17631394	MsaT007400.1:intron
ACCATTGGATGTCCACCGTA+GGG	0.583635	2:+17629487	None:intergenic
CACGCTCTGAAAAGAGCAAG+AGG	0.590582	2:-17628547	MsaT007400.1:CDS
TATGCAGCACCTCCACAGCT+TGG	0.593812	2:-17631286	MsaT007400.1:CDS
AGATGAGAATCAACAAGATG+AGG	0.599218	2:-17628494	MsaT007400.1:CDS
TCAACTGCATCAGTTGGCAA+AGG	0.603408	2:+17629328	None:intergenic
GGATATGGATAAGCAGGTGG+TGG	0.616937	2:+17629568	None:intergenic
GAAAGTTACACGGAATCGGA+AGG	0.621098	2:-17629224	MsaT007400.1:intron
TATCCGCCGCAACCCTACGG+TGG	0.624811	2:-17629499	MsaT007400.1:CDS
TTAATGGGAATTCAGCATGC+AGG	0.625390	2:-17629355	MsaT007400.1:CDS
ATCATGTGTGGAAGAAGTCA+TGG	0.636060	2:+17632445	None:intergenic
TCTTCCACACATGATCCCAC+AGG	0.647344	2:-17632437	MsaT007400.1:intron
TGTCCACCGTAGGGTTGCGG+CGG	0.648752	2:+17629496	None:intergenic
AACCATTGGATGTCCACCGT+AGG	0.650023	2:+17629486	None:intergenic
AAAAGAGCAAGAGGATGTGG+AGG	0.656650	2:-17628538	MsaT007400.1:CDS
AATACCTGTGGGATCATGTG+TGG	0.669627	2:+17632433	None:intergenic
TCCGGATATGGATAAGCAGG+TGG	0.669883	2:+17629565	None:intergenic
AAATTGTTGTCCAGATAACG+AGG	0.691918	2:-17631401	MsaT007400.1:intron
AATCAGAAAAGAAAGTTACA+CGG	0.697568	2:-17629234	MsaT007400.1:CDS
GCAAACGGAATTTCTCACGC+CGG	0.724226	2:-17631334	MsaT007400.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	17628411	17632465	17628411	ID=MsaG007400
Chr2	mRNA	17628411	17632465	17628411	ID=MsaT007400.1;Parent=MsaG007400
Chr2	exon	17628411	17628596	17628411	ID=MsaT007400.1.exon5;Parent=MsaT007400.1
Chr2	CDS	17628411	17628596	17628411	ID=cds.MsaT007400.1;Parent=MsaT007400.1
Chr2	exon	17629225	17629389	17629225	ID=MsaT007400.1.exon4;Parent=MsaT007400.1
Chr2	CDS	17629225	17629389	17629225	ID=cds.MsaT007400.1;Parent=MsaT007400.1
Chr2	exon	17629489	17629593	17629489	ID=MsaT007400.1.exon3;Parent=MsaT007400.1
Chr2	CDS	17629489	17629593	17629489	ID=cds.MsaT007400.1;Parent=MsaT007400.1
Chr2	exon	17631270	17631409	17631270	ID=MsaT007400.1.exon2;Parent=MsaT007400.1
Chr2	CDS	17631270	17631409	17631270	ID=cds.MsaT007400.1;Parent=MsaT007400.1
Chr2	exon	17632438	17632465	17632438	ID=MsaT007400.1.exon1;Parent=MsaT007400.1
Chr2	CDS	17632438	17632465	17632438	ID=cds.MsaT007400.1;Parent=MsaT007400.1

Gene Sequence

>MsaT007400.1

ATGACTTCTTCCACACATGATCCCACAGATAACGAGGCTGATGGACAGCAGCAGTCAGAATCACAGATGCAGCCTATATCTGCAAACGGAATTTCTCACGCCGGTATTGATAATGCTCAGGTTGTTCAGTATGCAGCACCTCCACAGCTTGGCACGGGGCATGCTATGGCACCACCACCTGCTTATCCATATCCGGATCCCTACTACAGAAGCATCTTTGCTCCCTATGATGCACAACCTTATCCGCCGCAACCCTACGGTGGACATCCAATGGCCAATCTTCAGTTAATGGGAATTCAGCATGCAGGAGTTCCTTTGCCAACTGATGCAGTTGAGGAGCCTGTGTTTGTCAATGCAAAACAGTATCATGGTATTTTAAGACGCAGGCAGTCTCGTGCTAAAGCTGAATCAGAAAAGAAAGTTACACGGAATCGGAAGCCATACTTGCATGAATCACGACATTTGCACGCTCTGAAAAGAGCAAGAGGATGTGGAGGCCGGTTTCTGAATTCAAAGAAAGATGAGAATCAACAAGATGAGGTTGGATCAGCTGACAATTCACATTCCAATATCAATCTCAATTCTGATAGAAATGATCTTGCACAATCTGATAAAAATCCTTGA

Protein sequence

>MsaT007400.1

MTSSTHDPTDNEADGQQQSESQMQPISANGISHAGIDNAQVVQYAAPPQLGTGHAMAPPPAYPYPDPYYRSIFAPYDAQPYPPQPYGGHPMANLQLMGIQHAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESEKKVTRNRKPYLHESRHLHALKRARGCGGRFLNSKKDENQQDEVGSADNSHSNINLNSDRNDLAQSDKNP*